CmoCh04G020160 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G020160
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ring/U-Box superfamily protein, putative isoform 3
Location	Cmo_Chr04 : 10750659 .. 10753275 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGCAAATGACCACATATCTGCTGGATTAGAATATTTTGATCCAAGAATAACCTCGGTACTCCTATACTGCCGTGTTTGAATATCATTAGTACATTGCTTGTAGATAAGAGAAACTTCGAGAATGGACAACTAGTGTCAAATTACTGCCATGTAAATTGCTACGAGTGTCTCATCAATGCCACTCCAATCATCATTGGCATGTAACATGAAATGTCTAATGTCTAGCAACATCCTTAATGCTAATTACATTATTAGGAAACTAAATTTTTCTGAATTACCGAGGTATGAGAAATAGTGATCAATTTCATATGCGATTGTATATCCTCAATCCAAAAGTTATCTGATCACTGATTACTGTGTCTTAATTTGGTTAAACTAAACATAGAGCTTAACAAACCTTCGTACTAACGTCTTTTTCTACATTAATGTTAACACTGATGGACATTGTTCGTTTTCCTCGTTGAACTTGAATTTATTACCAGTTATAGTCAAGAAAACACAAATCTGATCACTGGGCATTGCGGCTAAGGGTCGTTAACTTTAACCAAGAAGTCATAGGTCCAAAACTTGCTACCTGCTTGGAAGATTAACCTTCTTTGATTGGGATCTTTCAAATGTTGTGAAGTTGAATAATAGTAAGCTACTTTGAAGTTTGTGAAAGTGTAAAAGGATTGGGATCTTTCAAATGTTGTGAAGTTGAATAATAGTATGCTACTTTGAAGTTTGTGAAAGTGTAAAAGGTCACGACTTCGGGTACTACAAAAATTTCGAGGAAGAAAAACTCCCTAATTCACTTGATTTAGAATGAGAGTCGTGTATTATTTCCTTCAGTGTCAACCTTGAATTTTTGCCGGTTGTTTTTCACTCAAGCTCATTGGCAACTTGACCTGCTTGTCCACTTTGTAATGCTGGCCTATCCCTTTTGATAATACTAATGATATTTTGACTTTCTTTGAATTAGGGAAGGATTCTTCTCCCGATAGGATAATTCTGTTCAAGATCAAGCAAGTAGCGGGCATTCTGACACCACATACAATAGTGATGATGGTTATTCTCTAACTGACCTAAATCGTACAAGGAGTTTTGAGGTCCTAGATGATCTTCCTGGACGTTCTGGGCCAATTAACGTGGAAAGTCATAACGCAAGCTCTTATAGCATTGGTCTAACTCAAGTCAGATCTAATTAAGAAAGAATTAGTGCTCAAGGTAGGGAAGCATCTATTGATGCGCTAGAAAATACACAAGAATAGGTTGAAGAAAATTGTGTAGCCAGCCAAACAGCTGATATCAACTCAATGGAGATGAGAGAAGATTCAGGACAACGTATGAGAAGAATTTTACAAGAAATTGCTGCAAAAAATTTATACCTTGAAGTTCCTCAGATTGATGCCGAGGATCATACTAGCATACCAGATGTCGAATCTTCCATTCAACAAATTGATACCCGCGAGGAATATGATGATATTGGAGTATTATCAGATAATTCTAGAAGTTTTCAAGACAATGATCTTGAAAATGTAGATCCGCTGGAATCTACTTCTCACGAGGAACTGAATGAAGATCTAGGTATGGGAGTTGAGCCAAATGATTGGCAAGCATATGGTTTTCAACGGGATGAATGGAAAAATAGCATTGAAGAAGATATAAACGAAACTCGGTTGGAAAGCATCACACTACTAATTGGTCTGGAGAATTCTCGAGTACGACACACAGAGGAGATATTCATCTGTAAAATGCCCCTGGAGCTTCACATGAAAATGTTATCATTGTGGAGGATGTGCCTAATTGGTTAGAGGGCTCTCCTAGTCGGGAGGCTACATCCAGCCGAAGGTTGGAGACCTTTTATTTTCGTGAAGAAAATAATGTGCATAATGTGGAAATGAGAGAACTTTTAAATACGTATCAAAAAATTTATATAACAACATGCCTGGCGGAATTCAGACTAAATGGTGAATTTACATGTGGACTATTTTTCTTTATTACGCAGGAGAAGTGTCTCTACTCTTCTTAGTAGTGGTTTCTGAGAAAGTCTTGACCAGTTAATTCGATCTTACATAGACAGGCGAGGTCACAGTACCAGTAATGGGGATCTAGACGAGACGATGTCCCCTTACACGTCTGTAAAACAAGAGCAAGAGCACGACAGGCAGACTGCAGGTCAAACGGGTTCTGCTGCGAGCCATCCACTTGCTTTGCCTCTGCCACCTGCAATGCCCCCTCGGCAACTTTGGGAACATGAATTGAGTCATGATAGTTTGTCAAGACGTGATTTCCATCAGCAGTTTGGAGCTGTATGTCTCATCATTGTTCCCTTGTTTGTTGTCTTTTCTGTTTGGATGAAATCAGTTGGATTAAAGTAAATAAAAGAGATAGGAAAACGTGCAAGTATCAATGGTAAACGATTGATGAATTGTGATTCTATAATTCAAATTTAGAATTATTGCAATTGTCTATTAGGCGAAGTCCAGTGTTGGTTGTTGGATAATCTGGTCATCTTTTTTTCGTTCTTTATTTTATTGTTATTACTATTCTTTTAAATTTGATGTTGTTGCTGAATTTTACAGGACTGGGAGATCATTAATGATTTGAGGATCGACATGTCTAGGCTATAG

mRNA sequence

ATGCAAGCAAATGACCACATATCTGCTGGATTAGAATATTTTGATCCAAGAATAACCTCGGATAATTCTGTTCAAGATCAAGCAAGTAGCGGGCATTCTGACACCACATACAATAGTGATGATGGTTATTCTCTAACTGACCTAAATCGTACAAGGAGTTTTGAGGTCCTAGATGATCTTCCTGGACGTTCTGGGCCAATTAACGTGGAAAGTCATAACGCAAGCTCTTATAGCATTGGTCTAACTCAAGTTGAAGAAAATTGTGTAGCCAGCCAAACAGCTGATATCAACTCAATGGAGATGAGAGAAGATTCAGGACAACGTATGAGAAGAATTTTACAAGAAATTGCTGCAAAAAATTTATACCTTGAAGTTCCTCAGATTGATGCCGAGGATCATACTAGCATACCAGATGTCGAATCTTCCATTCAACAAATTGATACCCGCGAGGAATATGATGATATTGGAGTATTATCAGATAATTCTAGAAGTTTTCAAGACAATGATCTTGAAAATGTAGATCCGCTGGAATCTACTTCTCACGAGGAACTGAATGAAGATCTAGGTATGGGAGTTGAGCCAAATGATTGGCAAGCATATGGTTTTCAACGGGATGAATGGAAAAATAGCATTGAAGAAGATATAAACGAAACTCGGTTGGAAAGCATCACACTACTAATTGGTCTGGAGAATTCTCGAGTACGACACACAGAGGAGATATTCATCTGTAAAATGCCCCTGGAGCTTCACATGAAAATGTTATCATTGTGGAGGATGTGCCTAATTGGAGAAGTGTCTCTACTCTTCTTAGTAGTGGTTTCTGAGAAAGTCTTGACCAACAGGCGAGGTCACAGTACCAGTAATGGGGATCTAGACGAGACGATGTCCCCTTACACGTCTGTAAAACAAGAGCAAGAGCACGACAGGCAGACTGCAGGTCAAACGGGTTCTGCTGCGAGCCATCCACTTGCTTTGCCTCTGCCACCTGCAATGCCCCCTCGGCAACTTTGGGAACATGAATTGAGTCATGATAGTTTGTCAAGACGTGATTTCCATCAGCAGTTTGGAGCTGACTGGGAGATCATTAATGATTTGAGGATCGACATGTCTAGGCTATAG

Coding sequence (CDS)

ATGCAAGCAAATGACCACATATCTGCTGGATTAGAATATTTTGATCCAAGAATAACCTCGGATAATTCTGTTCAAGATCAAGCAAGTAGCGGGCATTCTGACACCACATACAATAGTGATGATGGTTATTCTCTAACTGACCTAAATCGTACAAGGAGTTTTGAGGTCCTAGATGATCTTCCTGGACGTTCTGGGCCAATTAACGTGGAAAGTCATAACGCAAGCTCTTATAGCATTGGTCTAACTCAAGTTGAAGAAAATTGTGTAGCCAGCCAAACAGCTGATATCAACTCAATGGAGATGAGAGAAGATTCAGGACAACGTATGAGAAGAATTTTACAAGAAATTGCTGCAAAAAATTTATACCTTGAAGTTCCTCAGATTGATGCCGAGGATCATACTAGCATACCAGATGTCGAATCTTCCATTCAACAAATTGATACCCGCGAGGAATATGATGATATTGGAGTATTATCAGATAATTCTAGAAGTTTTCAAGACAATGATCTTGAAAATGTAGATCCGCTGGAATCTACTTCTCACGAGGAACTGAATGAAGATCTAGGTATGGGAGTTGAGCCAAATGATTGGCAAGCATATGGTTTTCAACGGGATGAATGGAAAAATAGCATTGAAGAAGATATAAACGAAACTCGGTTGGAAAGCATCACACTACTAATTGGTCTGGAGAATTCTCGAGTACGACACACAGAGGAGATATTCATCTGTAAAATGCCCCTGGAGCTTCACATGAAAATGTTATCATTGTGGAGGATGTGCCTAATTGGAGAAGTGTCTCTACTCTTCTTAGTAGTGGTTTCTGAGAAAGTCTTGACCAACAGGCGAGGTCACAGTACCAGTAATGGGGATCTAGACGAGACGATGTCCCCTTACACGTCTGTAAAACAAGAGCAAGAGCACGACAGGCAGACTGCAGGTCAAACGGGTTCTGCTGCGAGCCATCCACTTGCTTTGCCTCTGCCACCTGCAATGCCCCCTCGGCAACTTTGGGAACATGAATTGAGTCATGATAGTTTGTCAAGACGTGATTTCCATCAGCAGTTTGGAGCTGACTGGGAGATCATTAATGATTTGAGGATCGACATGTCTAGGCTATAG

Homology

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BLAST of CmoCh04G020160 vs. TrEMBL
Match: A0A0A0KDG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149350 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 5.6e-85
Identity = 213/436 (48.85%), Postives = 250/436 (57.34%), Query Frame = 1


Query: 6   HISAGL-EYFDPRITSDNSVQDQASSGHSDTTYNSDDGYSLTDLNRTRSFEVLDDLPGRS 65
           H  +GL E F  R+  D+SVQ QASS HSDTT NSDDG SLTDLNRT SFEVLDDL   S
Sbjct: 296 HTVSGLREGFFSRL--DSSVQSQASSRHSDTTSNSDDGDSLTDLNRTGSFEVLDDLREHS 355

Query: 66  GPINVESHNASSYSIGLT--------------------------QVEENCVASQTADINS 125
           G +NVESH  S  + GLT                          QV E+ +ASQT D NS
Sbjct: 356 GIVNVESHEGSHST-GLTEVRPDPEGSTSEAREEPVPVVESSEKQVAESGLASQTPDTNS 415

Query: 126 MEMREDSGQRMRRILQEIAAKNLYLEVPQIDAEDHTSIPDVESSIQQIDTREEYDDIGVL 185
            EMR+DSGQ MR ILQE A+  LY E+PQIDAEDHTS+ D E SIQQ +T +E    G +
Sbjct: 416 TEMRDDSGQGMRSILQETASNLLYREIPQIDAEDHTSVLDTEPSIQQDNTHDENVHDGSV 475

Query: 186 SDNSRSFQDNDLENVDPLESTSHEELNEDLGMGVEPNDWQAYGFQRDEWKNSI------- 245
            D+S  FQDNDLE+VDP ES +H+ELNEDLG  VEPND QA GFQ+DEW+NSI       
Sbjct: 476 FDHSERFQDNDLESVDPQESNTHDELNEDLGTVVEPNDRQASGFQQDEWENSIEEDINET 535

Query: 246 ---------EEDINETRLESITL--------------------LIGLENSRVRHTEEIFI 305
                     E+   T    I L                      GL N     +  +  
Sbjct: 536 HMESIGTNWSEEFLSTTYRDIHLQNAPEASHENAIFVEDVPNWFEGLPNREATSSRRLET 595

Query: 306 CKMPLELHMKMLSLWRMCLIGEVSLLFLVVVSEKV------LTNRRGHSTSNGDLDETMS 365
              P + +     +  +     VS L      E +         R+GH + N D+DE M 
Sbjct: 596 FYFPEDDNAHNGEIRELLSRRSVSTLLSSGFRESLDQLIQSYVERQGHGSGNRDMDEMMP 655

Query: 366 PYTSVKQEQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLWEHELSHDSLSRRDFHQQFG 373
           PYTS +QEQEHDRQ+ GQ GS  SH LALPLPP +P R LW++ELS+ S SRRDF QQFG
Sbjct: 656 PYTSAEQEQEHDRQSEGQAGSVESHSLALPLPPTLPSRPLWDNELSNGSWSRRDFRQQFG 715

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BLAST of CmoCh04G020160 vs. TrEMBL
Match: B9SCM1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0475470 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.7e-14
Identity = 45/94 (47.87%), Postives = 58/94 (61.70%), Query Frame = 1


Query: 281 RRGHSTSNGDLDETMSPYTSVKQEQEHDR--QTAGQTGSAASHPLALPLPPAMPPRQLWE 340
           R+GH+  + +L+ T +   S +QE E     Q  GQ  S  S PLALP PP  P +QLW+
Sbjct: 39  RQGHAPLDWELEGTSATPASAEQEPEQQSRDQNEGQEDSVQSTPLALPSPPIPPVQQLWD 98

Query: 341 HELSHDSLSRRDFHQQFGADWEIINDLRIDMSRL 373
            E  H    + D HQ+FG DW+IINDLRIDM+RL
Sbjct: 99  QESQHFIWPQHDMHQRFGIDWDIINDLRIDMARL 132

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BLAST of CmoCh04G020160 vs. TrEMBL
Match: V4SFT9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027818mg PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-11
Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 1


Query: 280 NRRGHSTSNGDLDETMSPYTSVKQ--EQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLW 339
           +R+ H+  + +L+ T S   S +Q  EQ++  Q   Q  +  S PLALP P   P + LW
Sbjct: 628 DRQSHAPVDWELNGTSSGAASAEQDLEQQNGDQNEDQRETIESPPLALPSPSLPPVQPLW 687

Query: 340 EHELSHDSLSRRDFHQQFGADWEIINDLRIDMSRL 373
           + E  HD+    D HQ+FG +W+IINDLRIDM+RL
Sbjct: 688 DQESHHDNWQSHDMHQRFGIEWDIINDLRIDMARL 722

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BLAST of CmoCh04G020160 vs. TrEMBL
Match: A0A061GZU9_THECC (Ring/U-Box superfamily protein, putative isoform 4 (Fragment) OS=Theobroma cacao GN=TCM_041566 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10
Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 1


Query: 281 RRGHSTSNGDLDETMSPYTSVKQ--EQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLWE 340
           R+ H++ + +L ET     S++Q  EQ+   Q  GQ  +    PLALP P   P + LW+
Sbjct: 638 RQNHASIDWELHETSPTPASLEQDLEQQSRDQNEGQGDAVEGPPLALPSPRMPPTQPLWD 697

Query: 341 HELSHDSLSRRDFHQQFGADWEIINDLRIDMSRL 373
            +  H + +  D HQ+FG +WEI+NDLRIDM+RL
Sbjct: 698 QDSHHYNWAPHDMHQRFGIEWEIVNDLRIDMARL 731

[Close]

BLAST of CmoCh04G020160 vs. TrEMBL
Match: A0A061GW37_THECC (Ring/U-Box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_041566 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10
Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 1


Query: 281 RRGHSTSNGDLDETMSPYTSVKQ--EQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLWE 340
           R+ H++ + +L ET     S++Q  EQ+   Q  GQ  +    PLALP P   P + LW+
Sbjct: 638 RQNHASIDWELHETSPTPASLEQDLEQQSRDQNEGQGDAVEGPPLALPSPRMPPTQPLWD 697

Query: 341 HELSHDSLSRRDFHQQFGADWEIINDLRIDMSRL 373
            +  H + +  D HQ+FG +WEI+NDLRIDM+RL
Sbjct: 698 QDSHHYNWAPHDMHQRFGIEWEIVNDLRIDMARL 731

[Close]

BLAST of CmoCh04G020160 vs. TAIR10
Match: AT2G27950.1 (AT2G27950.1 Ring/U-Box superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11
Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 1


Query: 280 NRRGHSTSNGDLDETMSPYTSVKQ--EQEHDRQTAGQTGSAA-SHPLALPLPPAMPPRQL 339
           +RR  +  + +  ET S +T V +  EQ+ D Q+ GQ   A  S PL LP  P +P +  
Sbjct: 632 DRRSQNPVDWEEAETYSDHTIVGEDTEQQDDAQSGGQELDAVESPPLTLP-SPVIPIQPR 691

Query: 340 WEHELSHDSLSRRDFHQQFGADWEIINDLRIDMSRL 373
           W+H+ SH +    D HQ  G DW+ INDLR+DM R+
Sbjct: 692 WDHDRSHSNWPAHDLHQGIGMDWDSINDLRVDMGRI 726

[Close]

BLAST of CmoCh04G020160 vs. NCBI nr
Match: gi|449456168|ref|XP_004145822.1| (PREDICTED: uncharacterized protein LOC101214410 isoform X2 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 8.0e-85
Identity = 213/436 (48.85%), Postives = 250/436 (57.34%), Query Frame = 1


Query: 6   HISAGL-EYFDPRITSDNSVQDQASSGHSDTTYNSDDGYSLTDLNRTRSFEVLDDLPGRS 65
           H  +GL E F  R+  D+SVQ QASS HSDTT NSDDG SLTDLNRT SFEVLDDL   S
Sbjct: 296 HTVSGLREGFFSRL--DSSVQSQASSRHSDTTSNSDDGDSLTDLNRTGSFEVLDDLREHS 355

Query: 66  GPINVESHNASSYSIGLT--------------------------QVEENCVASQTADINS 125
           G +NVESH  S  + GLT                          QV E+ +ASQT D NS
Sbjct: 356 GIVNVESHEGSHST-GLTEVRPDPEGSTSEAREEPVPVVESSEKQVAESGLASQTPDTNS 415

Query: 126 MEMREDSGQRMRRILQEIAAKNLYLEVPQIDAEDHTSIPDVESSIQQIDTREEYDDIGVL 185
            EMR+DSGQ MR ILQE A+  LY E+PQIDAEDHTS+ D E SIQQ +T +E    G +
Sbjct: 416 TEMRDDSGQGMRSILQETASNLLYREIPQIDAEDHTSVLDTEPSIQQDNTHDENVHDGSV 475

Query: 186 SDNSRSFQDNDLENVDPLESTSHEELNEDLGMGVEPNDWQAYGFQRDEWKNSI------- 245
            D+S  FQDNDLE+VDP ES +H+ELNEDLG  VEPND QA GFQ+DEW+NSI       
Sbjct: 476 FDHSERFQDNDLESVDPQESNTHDELNEDLGTVVEPNDRQASGFQQDEWENSIEEDINET 535

Query: 246 ---------EEDINETRLESITL--------------------LIGLENSRVRHTEEIFI 305
                     E+   T    I L                      GL N     +  +  
Sbjct: 536 HMESIGTNWSEEFLSTTYRDIHLQNAPEASHENAIFVEDVPNWFEGLPNREATSSRRLET 595

Query: 306 CKMPLELHMKMLSLWRMCLIGEVSLLFLVVVSEKV------LTNRRGHSTSNGDLDETMS 365
              P + +     +  +     VS L      E +         R+GH + N D+DE M 
Sbjct: 596 FYFPEDDNAHNGEIRELLSRRSVSTLLSSGFRESLDQLIQSYVERQGHGSGNRDMDEMMP 655

Query: 366 PYTSVKQEQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLWEHELSHDSLSRRDFHQQFG 373
           PYTS +QEQEHDRQ+ GQ GS  SH LALPLPP +P R LW++ELS+ S SRRDF QQFG
Sbjct: 656 PYTSAEQEQEHDRQSEGQAGSVESHSLALPLPPTLPSRPLWDNELSNGSWSRRDFRQQFG 715

[Close]

BLAST of CmoCh04G020160 vs. NCBI nr
Match: gi|778713418|ref|XP_011657046.1| (PREDICTED: uncharacterized protein LOC101214410 isoform X1 [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 1.0e-84
Identity = 213/437 (48.74%), Postives = 250/437 (57.21%), Query Frame = 1


Query: 6   HISAGL--EYFDPRITSDNSVQDQASSGHSDTTYNSDDGYSLTDLNRTRSFEVLDDLPGR 65
           H  +GL  E F  R+  D+SVQ QASS HSDTT NSDDG SLTDLNRT SFEVLDDL   
Sbjct: 296 HTVSGLSREGFFSRL--DSSVQSQASSRHSDTTSNSDDGDSLTDLNRTGSFEVLDDLREH 355

Query: 66  SGPINVESHNASSYSIGLT--------------------------QVEENCVASQTADIN 125
           SG +NVESH  S  + GLT                          QV E+ +ASQT D N
Sbjct: 356 SGIVNVESHEGSHST-GLTEVRPDPEGSTSEAREEPVPVVESSEKQVAESGLASQTPDTN 415

Query: 126 SMEMREDSGQRMRRILQEIAAKNLYLEVPQIDAEDHTSIPDVESSIQQIDTREEYDDIGV 185
           S EMR+DSGQ MR ILQE A+  LY E+PQIDAEDHTS+ D E SIQQ +T +E    G 
Sbjct: 416 STEMRDDSGQGMRSILQETASNLLYREIPQIDAEDHTSVLDTEPSIQQDNTHDENVHDGS 475

Query: 186 LSDNSRSFQDNDLENVDPLESTSHEELNEDLGMGVEPNDWQAYGFQRDEWKNSI------ 245
           + D+S  FQDNDLE+VDP ES +H+ELNEDLG  VEPND QA GFQ+DEW+NSI      
Sbjct: 476 VFDHSERFQDNDLESVDPQESNTHDELNEDLGTVVEPNDRQASGFQQDEWENSIEEDINE 535

Query: 246 ----------EEDINETRLESITL--------------------LIGLENSRVRHTEEIF 305
                      E+   T    I L                      GL N     +  + 
Sbjct: 536 THMESIGTNWSEEFLSTTYRDIHLQNAPEASHENAIFVEDVPNWFEGLPNREATSSRRLE 595

Query: 306 ICKMPLELHMKMLSLWRMCLIGEVSLLFLVVVSEKV------LTNRRGHSTSNGDLDETM 365
               P + +     +  +     VS L      E +         R+GH + N D+DE M
Sbjct: 596 TFYFPEDDNAHNGEIRELLSRRSVSTLLSSGFRESLDQLIQSYVERQGHGSGNRDMDEMM 655

Query: 366 SPYTSVKQEQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLWEHELSHDSLSRRDFHQQF 373
            PYTS +QEQEHDRQ+ GQ GS  SH LALPLPP +P R LW++ELS+ S SRRDF QQF
Sbjct: 656 PPYTSAEQEQEHDRQSEGQAGSVESHSLALPLPPTLPSRPLWDNELSNGSWSRRDFRQQF 715

[Close]

BLAST of CmoCh04G020160 vs. NCBI nr
Match: gi|659130940|ref|XP_008465430.1| (PREDICTED: uncharacterized protein LOC103503044 isoform X2 [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 9.2e-65
Identity = 192/445 (43.15%), Postives = 234/445 (52.58%), Query Frame = 1


Query: 6   HISAGL-EYFDPRITSDNSVQDQASSGHSDTTYNSDDGYSLTDLNRTRSFEVLDDLPGRS 65
           H  +GL E F  R+  D+SVQ QASS HSDTT NSDDG SLTDLNRT SFEVLDDL   S
Sbjct: 296 HTVSGLREGFFSRL--DSSVQSQASSRHSDTTSNSDDGDSLTDLNRTGSFEVLDDLREHS 355

Query: 66  GPINVESHNASSYSIGLT--------------------------QVEENCVASQTADINS 125
           G INVESH   S+S GL+                          QV E+ +ASQTADINS
Sbjct: 356 GIINVESHE-GSHSTGLSEVRPDLEESTSEARKEPVPVVESSEEQVAESGLASQTADINS 415

Query: 126 MEMREDSGQRMRRILQEIAAKNLYLEVPQIDAEDHTSIPDVESSIQQIDTREEYDDIGVL 185
            EMR+DSGQ MR ILQE A+  LY E+PQID EDHTS+ D E SIQQ +TR+E    G +
Sbjct: 416 TEMRDDSGQGMRSILQETASNLLYREIPQIDGEDHTSVLDTEPSIQQDNTRDENVHDGSV 475

Query: 186 SDNSRSFQDNDLENVDPLESTSHEELNEDLGMGVEPNDWQAYGFQRDEWKNSIEEDINET 245
            D+S   QDNDLE+VDP ES + +E NEDLG  VEPND QA GFQ DEW+NSIEEDINET
Sbjct: 476 LDHSERSQDNDLESVDPHESNTRDEPNEDLGTVVEPNDRQASGFQHDEWENSIEEDINET 535

Query: 246 RLESITLLIGLENSRVRHTEEIFICKMPLELHMKMLSLWRMCLIGEVSLLFLVVVSEKVL 305
            LESI      E     +  +I +   P   H   +       + +V   F  + + +  
Sbjct: 536 HLESIATNWSEEFLSTTYRGDIHLQNAPEASHENAI------FVEDVPNWFEGLPNREAT 595

Query: 306 TNRR--------GHSTSNGDLDETMSPYTSVKQEQEHDRQTAGQT---------GSAASH 365
           ++RR          +  NG++ E +S  +         R++  Q              + 
Sbjct: 596 SSRRLETFYFPEDDNAHNGEIRELLSRRSVSTLLSSGFRESLDQLIQSYVERQGHGTGNR 655

Query: 366 PLALPLPPAMPPRQLWEHEL----------------------------------SHDSLS 373
            +   +PP     Q  EH+                                   S+ S S
Sbjct: 656 DMDEMMPPYTSAEQEQEHDRQSEGQAGSVESHSLALPLPLPPTLPSRQLWDNELSNGSWS 715

[Close]

BLAST of CmoCh04G020160 vs. NCBI nr
Match: gi|659130942|ref|XP_008465431.1| (PREDICTED: probable GPI-anchored adhesin-like protein PGA55 isoform X3 [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 192/446 (43.05%), Postives = 234/446 (52.47%), Query Frame = 1


Query: 6   HISAGL--EYFDPRITSDNSVQDQASSGHSDTTYNSDDGYSLTDLNRTRSFEVLDDLPGR 65
           H  +GL  E F  R+  D+SVQ QASS HSDTT NSDDG SLTDLNRT SFEVLDDL   
Sbjct: 281 HTVSGLSREGFFSRL--DSSVQSQASSRHSDTTSNSDDGDSLTDLNRTGSFEVLDDLREH 340

Query: 66  SGPINVESHNASSYSIGLT--------------------------QVEENCVASQTADIN 125
           SG INVESH   S+S GL+                          QV E+ +ASQTADIN
Sbjct: 341 SGIINVESHE-GSHSTGLSEVRPDLEESTSEARKEPVPVVESSEEQVAESGLASQTADIN 400

Query: 126 SMEMREDSGQRMRRILQEIAAKNLYLEVPQIDAEDHTSIPDVESSIQQIDTREEYDDIGV 185
           S EMR+DSGQ MR ILQE A+  LY E+PQID EDHTS+ D E SIQQ +TR+E    G 
Sbjct: 401 STEMRDDSGQGMRSILQETASNLLYREIPQIDGEDHTSVLDTEPSIQQDNTRDENVHDGS 460

Query: 186 LSDNSRSFQDNDLENVDPLESTSHEELNEDLGMGVEPNDWQAYGFQRDEWKNSIEEDINE 245
           + D+S   QDNDLE+VDP ES + +E NEDLG  VEPND QA GFQ DEW+NSIEEDINE
Sbjct: 461 VLDHSERSQDNDLESVDPHESNTRDEPNEDLGTVVEPNDRQASGFQHDEWENSIEEDINE 520

Query: 246 TRLESITLLIGLENSRVRHTEEIFICKMPLELHMKMLSLWRMCLIGEVSLLFLVVVSEKV 305
           T LESI      E     +  +I +   P   H   +       + +V   F  + + + 
Sbjct: 521 THLESIATNWSEEFLSTTYRGDIHLQNAPEASHENAI------FVEDVPNWFEGLPNREA 580

Query: 306 LTNRR--------GHSTSNGDLDETMSPYTSVKQEQEHDRQTAGQT---------GSAAS 365
            ++RR          +  NG++ E +S  +         R++  Q              +
Sbjct: 581 TSSRRLETFYFPEDDNAHNGEIRELLSRRSVSTLLSSGFRESLDQLIQSYVERQGHGTGN 640

Query: 366 HPLALPLPPAMPPRQLWEHEL----------------------------------SHDSL 373
             +   +PP     Q  EH+                                   S+ S 
Sbjct: 641 RDMDEMMPPYTSAEQEQEHDRQSEGQAGSVESHSLALPLPLPPTLPSRQLWDNELSNGSW 700

[Close]

BLAST of CmoCh04G020160 vs. NCBI nr
Match: gi|659130938|ref|XP_008465429.1| (PREDICTED: uncharacterized protein LOC103503044 isoform X1 [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 192/446 (43.05%), Postives = 234/446 (52.47%), Query Frame = 1


Query: 6   HISAGL--EYFDPRITSDNSVQDQASSGHSDTTYNSDDGYSLTDLNRTRSFEVLDDLPGR 65
           H  +GL  E F  R+  D+SVQ QASS HSDTT NSDDG SLTDLNRT SFEVLDDL   
Sbjct: 296 HTVSGLSREGFFSRL--DSSVQSQASSRHSDTTSNSDDGDSLTDLNRTGSFEVLDDLREH 355

Query: 66  SGPINVESHNASSYSIGLT--------------------------QVEENCVASQTADIN 125
           SG INVESH   S+S GL+                          QV E+ +ASQTADIN
Sbjct: 356 SGIINVESHE-GSHSTGLSEVRPDLEESTSEARKEPVPVVESSEEQVAESGLASQTADIN 415

Query: 126 SMEMREDSGQRMRRILQEIAAKNLYLEVPQIDAEDHTSIPDVESSIQQIDTREEYDDIGV 185
           S EMR+DSGQ MR ILQE A+  LY E+PQID EDHTS+ D E SIQQ +TR+E    G 
Sbjct: 416 STEMRDDSGQGMRSILQETASNLLYREIPQIDGEDHTSVLDTEPSIQQDNTRDENVHDGS 475

Query: 186 LSDNSRSFQDNDLENVDPLESTSHEELNEDLGMGVEPNDWQAYGFQRDEWKNSIEEDINE 245
           + D+S   QDNDLE+VDP ES + +E NEDLG  VEPND QA GFQ DEW+NSIEEDINE
Sbjct: 476 VLDHSERSQDNDLESVDPHESNTRDEPNEDLGTVVEPNDRQASGFQHDEWENSIEEDINE 535

Query: 246 TRLESITLLIGLENSRVRHTEEIFICKMPLELHMKMLSLWRMCLIGEVSLLFLVVVSEKV 305
           T LESI      E     +  +I +   P   H   +       + +V   F  + + + 
Sbjct: 536 THLESIATNWSEEFLSTTYRGDIHLQNAPEASHENAI------FVEDVPNWFEGLPNREA 595

Query: 306 LTNRR--------GHSTSNGDLDETMSPYTSVKQEQEHDRQTAGQT---------GSAAS 365
            ++RR          +  NG++ E +S  +         R++  Q              +
Sbjct: 596 TSSRRLETFYFPEDDNAHNGEIRELLSRRSVSTLLSSGFRESLDQLIQSYVERQGHGTGN 655

Query: 366 HPLALPLPPAMPPRQLWEHEL----------------------------------SHDSL 373
             +   +PP     Q  EH+                                   S+ S 
Sbjct: 656 RDMDEMMPPYTSAEQEQEHDRQSEGQAGSVESHSLALPLPLPPTLPSRQLWDNELSNGSW 715

The following BLAST results are available for this feature:

BLAST of CmoCh04G020160 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G020160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDG6_CUCSA	5.6e-85	48.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149350 PE=4 SV=1	[more]
B9SCM1_RICCO	6.7e-14	47.87	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0475470 PE=4 SV=1	[more]
V4SFT9_9ROSI	1.8e-11	43.16	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027818mg PE=4 SV=1	[more]
A0A061GZU9_THECC	1.2e-10	41.49	Ring/U-Box superfamily protein, putative isoform 4 (Fragment) OS=Theobroma cacao...	[more]
A0A061GW37_THECC	1.2e-10	41.49	Ring/U-Box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_041...	[more]

BLAST of CmoCh04G020160 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27950.1	1.6e-11	40.63	Ring/U-Box superfamily protein	[more]

BLAST of CmoCh04G020160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456168\|ref\|XP_004145822.1\|	8.0e-85	48.85	PREDICTED: uncharacterized protein LOC101214410 isoform X2 [Cucumis sativus]	[more]
gi\|778713418\|ref\|XP_011657046.1\|	1.0e-84	48.74	PREDICTED: uncharacterized protein LOC101214410 isoform X1 [Cucumis sativus]	[more]
gi\|659130940\|ref\|XP_008465430.1\|	9.2e-65	43.15	PREDICTED: uncharacterized protein LOC103503044 isoform X2 [Cucumis melo]	[more]
gi\|659130942\|ref\|XP_008465431.1\|	1.2e-64	43.05	PREDICTED: probable GPI-anchored adhesin-like protein PGA55 isoform X3 [Cucumis ...	[more]
gi\|659130938\|ref\|XP_008465429.1\|	1.2e-64	43.05	PREDICTED: uncharacterized protein LOC103503044 isoform X1 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G020160.1	CmoCh04G020160.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G020160	Cucumber (Gy14) v2	cgybcmoB665
CmoCh04G020160	Melon (DHL92) v3.6.1	cmomedB723
CmoCh04G020160	Cucumber (Chinese Long) v3	cmocucB0895
CmoCh04G020160	Watermelon (97103) v2	cmowmbB699
CmoCh04G020160	Watermelon (97103) v2	cmowmbB712
CmoCh04G020160	Wax gourd	cmowgoB0906
CmoCh04G020160	Wax gourd	cmowgoB0914
CmoCh04G020160	Cucumber (Gy14) v1	cgycmoB0522
CmoCh04G020160	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G020160	Wild cucumber (PI 183967)	cmocpiB741
CmoCh04G020160	Wild cucumber (PI 183967)	cmocpiB754
CmoCh04G020160	Cucumber (Chinese Long) v2	cmocuB745
CmoCh04G020160	Watermelon (Charleston Gray)	cmowcgB623
CmoCh04G020160	Watermelon (Charleston Gray)	cmowcgB629
CmoCh04G020160	Watermelon (97103) v1	cmowmB728
CmoCh04G020160	Watermelon (97103) v1	cmowmB733
CmoCh04G020160	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G020160	Cucurbita pepo (Zucchini)	cmocpeB677
CmoCh04G020160	Cucurbita pepo (Zucchini)	cmocpeB686
CmoCh04G020160	Bottle gourd (USVL1VR-Ls)	cmolsiB623