CmoCh04G018790 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCCTCCAACTCGGCTCTGTCCCAACCATCGTTATCTCCTCTGCCGCCGCTGCAAAAGAGTTGTTTAAGTTCCATGATCTTGCTTCTTGCAGCCGCCCTCGCTTAACGGGTAGTGGAAGACTTTCATACAACTTCTTGGATCTAAATCTATCACCGTACGGTGGACGGTGGAGGGAACTACGGAAGATTTGAACGCTTCAGCTCTTCACTGCTCGGCGGGTTCAATCTTTTTGGGAAATTAGAGAAGAGGAAGTGGGGCGCCTTGTAAACTCCATCTCTCAATCCTCTTCTTCTTTAGCTTCAATCAATCTGAGTGAGAAATCATATTCTCTCACTGCAAATATAACAACAAGAGTTGCTTTTGGGAGCATCTTCAGCCGGGGAAAATTAGATGATGAACACTTTCAACATGTTATCCGGAGAGCAGTTGCAGCAATTGGAAGCTTCTCCATGACCGATTTCATTCCTACTTTCGGTTGGATTATTGATCGGTTGAATGGTGTTCATGGGAGGCTGTAGAAGAGCTTTGCTGAAATGGATGCCTTTTTTCAACATATAGTCGACGATCGTATATACTTCAAGAAGACTTCTAAGAATGGAGAAAACGTTGTTGATGTTTTGTTGAGAATGGAAAGGGAAAGCTCTGAATCTGATGCACTAAAAGTAACCCAAGATTGCATAAAGCACTTATCATGGTAACCTAAACTCTTTTGAAAAGTAGCAAACTGTTAGGCCCATAATTTCTTATGATTCGTTTGATATAACCATATGTGTGCGCTTCTAGGATATTTTTTTCTAGCTGGAGCAGACACAGGGGCAACCACCATTGTTTGGACGATGACAGAGCTAATTAGGAACCCAAGAGTGATGAAGAAATTCCAAGAGGAGATTAGAGGTTGCATAGATTCAGTGAAAGAGATCAACTTGAAAAATCTTGAGTATCTAAAAATGGTAGTGAAAGAGGTATTGAGATTGCATCCACCAATCCCACTTCTACTTTCAAGGGAAACCATCTCCCCTTTTAAGCTCAACGGTTACGATATGGACCCCAAGGCTCATCTCCACGTTAATGTGTGGGCCATTGGATGAGACCCACAATCTTGGACTGACCCAGAAGAGTTCTTTCCCGAGAGGTTTATAGGAAGCAATATCGATTATAAGGGACAAAACTTCGAGTTAATACCTTTTGGAAGCGGGAGAAGAATTTGCCTTGGGATGAATATGGCAACCCTTACGGTGGAGTTGGCACTGGCGAACCTGTTGTTGTACTTTGA ATGCTCCTCCAACTCGGCTCTGTCCCAACCATCGTTATCTCCTCTGCCGCCGCTGCAAAAGAGTTGTTTAAGTTCCATGATCTTGCTTCTTGCAGCCGCCCTCGCTTAACGGGATATTTTTTTCTAGCTGGAGCAGACACAGGGGCAACCACCATTGTTTGGACGATGACAGAGCTAATTAGGAACCCAAGAGTGATGAAGAAATTCCAAGAGGAGATTAGAGGTTGCATAGATTCAGTGAAAGAGATCAACTTGAAAAATCTTGAGTATCTAAAAATGGTAGTGAAAGAGCGGGAGAAGAATTTGCCTTGGGATGAATATGGCAACCCTTACGGTGGAGTTGGCACTGGCGAACCTGTTGTTGTACTTTGA ATGCTCCTCCAACTCGGCTCTGTCCCAACCATCGTTATCTCCTCTGCCGCCGCTGCAAAAGAGTTGTTTAAGTTCCATGATCTTGCTTCTTGCAGCCGCCCTCGCTTAACGGGATATTTTTTTCTAGCTGGAGCAGACACAGGGGCAACCACCATTGTTTGGACGATGACAGAGCTAATTAGGAACCCAAGAGTGATGAAGAAATTCCAAGAGGAGATTAGAGGTTGCATAGATTCAGTGAAAGAGATCAACTTGAAAAATCTTGAGTATCTAAAAATGGTAGTGAAAGAGCGGGAGAAGAATTTGCCTTGGGATGAATATGGCAACCCTTACGGTGGAGTTGGCACTGGCGAACCTGTTGTTGTACTTTGA
BLAST of CmoCh04G018790 vs. Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 5.1e-12 Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 1
BLAST of CmoCh04G018790 vs. Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 8.6e-12 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1
BLAST of CmoCh04G018790 vs. Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 8.6e-12 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1
BLAST of CmoCh04G018790 vs. Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 8.6e-12 Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 1
BLAST of CmoCh04G018790 vs. Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.6e-11 Identity = 32/61 (52.46%), Postives = 46/61 (75.41%), Query Frame = 1
BLAST of CmoCh04G018790 vs. TrEMBL
Match: A0A067KK40_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08422 PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-14 Identity = 59/147 (40.14%), Postives = 73/147 (49.66%), Query Frame = 1
BLAST of CmoCh04G018790 vs. TrEMBL
Match: B9SB69_RICCO (Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0785500 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-12 Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 1
BLAST of CmoCh04G018790 vs. TrEMBL
Match: B9SB66_RICCO (Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0785370 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 3.5e-12 Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 1
BLAST of CmoCh04G018790 vs. TrEMBL
Match: A0A0D3HT43_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.8e-11 Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 1
BLAST of CmoCh04G018790 vs. TrEMBL
Match: B9SB72_RICCO (Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0785630 PE=3 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.3e-11 Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = 1
BLAST of CmoCh04G018790 vs. TAIR10
Match: AT3G26270.1 (AT3G26270.1 cytochrome P450, family 71, subfamily B, polypeptide 25) HSP 1 Score: 72.0 bits (175), Expect = 2.9e-13 Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 1
BLAST of CmoCh04G018790 vs. TAIR10
Match: AT3G26220.1 (AT3G26220.1 cytochrome P450, family 71, subfamily B, polypeptide 3) HSP 1 Score: 71.2 bits (173), Expect = 4.9e-13 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1
BLAST of CmoCh04G018790 vs. TAIR10
Match: AT3G26230.1 (AT3G26230.1 cytochrome P450, family 71, subfamily B, polypeptide 24) HSP 1 Score: 71.2 bits (173), Expect = 4.9e-13 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1
BLAST of CmoCh04G018790 vs. TAIR10
Match: AT3G26210.1 (AT3G26210.1 cytochrome P450, family 71, subfamily B, polypeptide 23) HSP 1 Score: 71.2 bits (173), Expect = 4.9e-13 Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 1
BLAST of CmoCh04G018790 vs. TAIR10
Match: AT3G53280.1 (AT3G53280.1 cytochrome p450 71b5) HSP 1 Score: 68.6 bits (166), Expect = 3.2e-12 Identity = 32/61 (52.46%), Postives = 46/61 (75.41%), Query Frame = 1
BLAST of CmoCh04G018790 vs. NCBI nr
Match: gi|643728592|gb|KDP36606.1| (hypothetical protein JCGZ_08422 [Jatropha curcas]) HSP 1 Score: 87.4 bits (215), Expect = 1.9e-14 Identity = 59/147 (40.14%), Postives = 73/147 (49.66%), Query Frame = 1
BLAST of CmoCh04G018790 vs. NCBI nr
Match: gi|659090661|ref|XP_008446134.1| (PREDICTED: cytochrome P450 71B2-like [Cucumis melo]) HSP 1 Score: 83.6 bits (205), Expect = 2.7e-13 Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 1
BLAST of CmoCh04G018790 vs. NCBI nr
Match: gi|449435434|ref|XP_004135500.1| (PREDICTED: cytochrome P450 71B37-like [Cucumis sativus]) HSP 1 Score: 81.6 bits (200), Expect = 1.0e-12 Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 1
BLAST of CmoCh04G018790 vs. NCBI nr
Match: gi|778708641|ref|XP_011656251.1| (PREDICTED: cytochrome P450 71B10-like [Cucumis sativus]) HSP 1 Score: 81.6 bits (200), Expect = 1.0e-12 Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 1
BLAST of CmoCh04G018790 vs. NCBI nr
Match: gi|255564484|ref|XP_002523238.1| (PREDICTED: cytochrome P450 71B10 [Ricinus communis]) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-12 Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |