CmoCh04G017530 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G017530
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRanBP2-type zinc finger protein
LocationCmo_Chr04 : 8848907 .. 8850970 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTTCATGAAAGGAGACTTGCTAACTAGGACTAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTATTTGGCTCAAAGCCATGGAACAGTCAGTTCTTCTATTCCTCACTCCTCGTACTTTTGCCTTTTTAAGAGTATTTCATTTTCTAGGATCCTGAAAATGTTCAATTTTTTGTTCTAGCTTGTCAAAATAAATTTGATGATCTTTTGGTCTTATCTTCAAATTTCTTTTTTCTTAGATTTGTGTAACTTTTTGGGATACTATTGGATTCAAGTTTCTCAATTTATCATGTCTATGACATCTTTTTTGGTGAAATATTTCACAGCAGTTTTCTTTTCATTGAATTAAATGATTTTAAACTGCTTATTGAGATAAATTTCTTTGGAAGGACTGAAAGTTTTGGGATTTTTTTTCCTGTTGTTTCCTGCTCATGAGTTGAGCATATTGCTTGGTAGCAATGGATGCATAAAAAGTTGGGTTTCCAGTTAGCTTCCAATTGCTTGAAACAATTATCTTATCCATTACACTCTTGTTCAGGGCGCCACCTCCTACATTTCCTCGAATAGATGGAACAATCAAGACAATCACTCTTCCTGAGGATGTATATGTAAAAAAGTTCTTCCAGAAACATCCAGATTCAAAATACGAAGATGCGATCAAGTATGATGCTTCTCTTATATATGTAGTTTATCACATTTTACTCCATCATACATGTTTGAAATGAGGGATTGATTCCATTGTTCGAGAGCTACTTTTCTGCATTGAAGTAAAATTAGATTCTCAGGTTTTCAGATTCTTGTGGAACTTCTATCTTAAGGGTTTGGAGTGCACATGACGTAGAAAACTCTTGTTGGATATTCATGAATTAAAATTCCATATGCCTGCTGCTGAGGCTTGCCATGGGTTGTTGTATGTCTGTCTGGGTCGTGCATTTAACCAATGTTCAACTATAATGAGGAATTTCAAGCAATGTTAATTCTTCTGAAGGCCTATCATAATTGTAGTGAAGCCACTTCTAACGGCTACTTCCTGTTAAATGGTATATCTGTTGGCTTCTAGAATCAATCACTAGAGACATGCTTGGCTTAAAATAGATCAGCTGATAAAAAATGTTCCCGATGACACTTGCATTTTGGGAAGGATGGTGAATTGAGTTTGTCATTTGTCGTGCATGCTCTCAGAATTTGCCTTCTTCTTTGGGATAGAATCTCTAAAAGACATCAGCATTGCTAAAATAGATGGTTCAATTGAAGCATACATATATATATGTATGTATGTGTAGAGTTATATCTTGCATGGATGAAATCCTGATATAGAAGGATGTAAAAAAACAGAGAAAAAAAGAGAGAGAAAGTTCCTAAGTAGTTGTCTTTTGTTTCTACAGGTTCTGTAGTTTCGATCCTCCTCCAGCCCGAATATTCGGCCTGCGAGTGCTTGAACTGAAGGAACAGGGTGTCAGTGAGGAGGAAGCCATGGCAGTAGCCAATGTAAGGATTGTGGGTTCTTTTATTTGTTTCCTTCTCTTGAATCTCTTCATTTTGTGAATAACGCCTTTTGTCATTCAGATGGAATACCGGGCAGAGAAAAAGGCGAAAAAGAAGGCTTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCCTAACCCATATCCAAGCGCTATTAAGGAGATACAAGCCGAGGAAAGGAAATTCGTGCGGGATCGTTTCTTCAACCCGAAGATTAAAGAGATCGCTCAAAGGTTGAAGGAGGAGAGAGCAGCTGAAATGCAGGACAGAATGAGAGGCAGTGGCTGGTCATGAAGAGTTGTTTAATTTATACGACTTCCAACCTCCCATCTTTCTTCTCGCTCTGCTCTGGAAACTAGCTTTTGCAATAATTTTGGCAATTGGCTAAATAGGGAACGACACATTTTTTTAGATTCAAGTGACTACTACATCTGAAGCATTGGATCAAGCATGTTAAAGGATTTTTCTTTCGATGTTATTCGGGTCTGATGTTATTCGGGTCTTGGATTAATAATAGAACGATTCAAAAGCATAAA

mRNA sequence

ATGTCCTTCATGAAAGGAGACTTGCTAACTAGGACTAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTATTTGGCTCAAAGCCATGGAACAGGCGCCACCTCCTACATTTCCTCGAATAGATGGAACAATCAAGACAATCACTCTTCCTGAGGATGTATATGTAAAAAAGTTCTTCCAGAAACATCCAGATTCAAAATACGAAGATGCGATCAAGTTCTGTAGTTTCGATCCTCCTCCAGCCCGAATATTCGGCCTGCGAGTGCTTGAACTGAAGGAACAGGGTGTCAGTGAGGAGGAAGCCATGGCAGTAGCCAATATGGAATACCGGGCAGAGAAAAAGGCGAAAAAGAAGGCTTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCCTAACCCATATCCAAGCGCTATTAAGGAGATACAAGCCGAGGAAAGGAAATTCGTGCGGGATCGTTTCTTCAACCCGAAGATTAAAGAGATCGCTCAAAGGTTGAAGGAGGAGAGAGCAGCTGAAATGCAGGACAGAATGAGAGGCAGTGGCTGGTCATGAAGAGTTGTTTAATTTATACGACTTCCAACCTCCCATCTTTCTTCTCGCTCTGCTCTGGAAACTAGCTTTTGCAATAATTTTGGCAATTGGCTAAATAGGGAACGACACATTTTTTTAGATTCAAGTGACTACTACATCTGAAGCATTGGATCAAGCATGTTAAAGGATTTTTCTTTCGATGTTATTCGGGTCTGATGTTATTCGGGTCTTGGATTAATAATAGAACGATTCAAAAGCATAAA

Coding sequence (CDS)

ATGTCCTTCATGAAAGGAGACTTGCTAACTAGGACTAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTATTTGGCTCAAAGCCATGGAACAGGCGCCACCTCCTACATTTCCTCGAATAGATGGAACAATCAAGACAATCACTCTTCCTGAGGATGTATATGTAAAAAAGTTCTTCCAGAAACATCCAGATTCAAAATACGAAGATGCGATCAAGTTCTGTAGTTTCGATCCTCCTCCAGCCCGAATATTCGGCCTGCGAGTGCTTGAACTGAAGGAACAGGGTGTCAGTGAGGAGGAAGCCATGGCAGTAGCCAATATGGAATACCGGGCAGAGAAAAAGGCGAAAAAGAAGGCTTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCCTAACCCATATCCAAGCGCTATTAAGGAGATACAAGCCGAGGAAAGGAAATTCGTGCGGGATCGTTTCTTCAACCCGAAGATTAAAGAGATCGCTCAAAGGTTGAAGGAGGAGAGAGCAGCTGAAATGCAGGACAGAATGAGAGGCAGTGGCTGGTCATGA
Homology
[Close]
BLAST of CmoCh04G017530 vs. TrEMBL
Match: A0A0A0KQQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606340 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.5e-86
Identity = 165/185 (89.19%), Postives = 174/185 (94.05%), Query Frame = 1 

Query: 1   MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVKKFF 60
           MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPP+FPR+DGTIKTITLPEDVYVKKFF
Sbjct: 1   MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFF 60

Query: 61  QKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKA 120
           +KHPDS Y DAIKFC F+PPPARIF  RVLELKEQGV+EEEAM VANMEYRAEKK KK A
Sbjct: 61  KKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEEEAMTVANMEYRAEKKMKKNA 120

Query: 121 YSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQ 180
           YSRLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ
Sbjct: 121 YSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQ 180

Query: 181 DRMRG 186
           +R  G
Sbjct: 181 ERTGG 185

[Close]
BLAST of CmoCh04G017530 vs. TrEMBL
Match: D7UBH7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0261g00010 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.2e-83
Identity = 156/188 (82.98%), Postives = 174/188 (92.55%), Query Frame = 1 

Query: 1   MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVKKFF 60
           MSFMKGDLL RTRKLVKGLAKAEP+WLKAME+APPPTFPR DG +K I+LPED Y++KFF
Sbjct: 1   MSFMKGDLLARTRKLVKGLAKAEPVWLKAMERAPPPTFPRPDGKVKKISLPEDFYIQKFF 60

Query: 61  QKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKA 120
           QKHPDSKYEDAIK  +F+PPPAR+FG RVLELKEQGVSEEEAMAVA+MEYRAEKKAKK A
Sbjct: 61  QKHPDSKYEDAIKISAFNPPPARVFGCRVLELKEQGVSEEEAMAVADMEYRAEKKAKKMA 120

Query: 121 YSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQ 180
           Y+RLKQIARLQGK+ PPNPYPSAIKEIQAEERK+VRDRFFNPKI +I +++KEE+AA MQ
Sbjct: 121 YARLKQIARLQGKRLPPNPYPSAIKEIQAEERKYVRDRFFNPKILKIVEKMKEEKAAAMQ 180

Query: 181 DRMRGSGW 189
           DRMRG GW
Sbjct: 181 DRMRGGGW 188

[Close]
BLAST of CmoCh04G017530 vs. TrEMBL
Match: A5BWQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039509 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 5.5e-81
Identity = 153/185 (82.70%), Postives = 171/185 (92.43%), Query Frame = 1 

Query: 1   MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVKKFF 60
           MSFMKGDLL RTRKLVKGLAKAEP+WLKAME+APPPTFPR DG +K I+LPED Y++KFF
Sbjct: 1   MSFMKGDLLARTRKLVKGLAKAEPVWLKAMERAPPPTFPRPDGKVKKISLPEDFYIQKFF 60

Query: 61  QKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKA 120
           QKHPDSKYEDAIK  +F+PPPAR+FG RVLELKEQGVSEEEAMAVA+MEYRAEKKAKK A
Sbjct: 61  QKHPDSKYEDAIKISAFNPPPARVFGCRVLELKEQGVSEEEAMAVADMEYRAEKKAKKMA 120

Query: 121 YSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQ 180
           Y+RLKQIA LQGK+ PPNPYPSAIKEIQAEERK+VRDRFFNPKI +I +++KEE+AA MQ
Sbjct: 121 YARLKQIAXLQGKRLPPNPYPSAIKEIQAEERKYVRDRFFNPKILKIVEKMKEEKAAAMQ 180

Query: 181 DRMRG 186
           DRMRG
Sbjct: 181 DRMRG 185

[Close]
BLAST of CmoCh04G017530 vs. TrEMBL
Match: D7T9W5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00510 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.1e-80
Identity = 150/188 (79.79%), Postives = 172/188 (91.49%), Query Frame = 1 

Query: 1   MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVKKFF 60
           MS+MKGD+LTRTRKLVKGLAKAEP WLKAME+ PPPTFPR DG +K I+LPEDVY++KFF
Sbjct: 1   MSYMKGDMLTRTRKLVKGLAKAEPSWLKAMERVPPPTFPRPDGKVKKISLPEDVYIRKFF 60

Query: 61  QKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKA 120
            KHPDSK+EDAIK  +F+PPPAR+FG RVLELKE+GVSEEEAMAVA+MEYRAEKKAK+ A
Sbjct: 61  LKHPDSKHEDAIKMTAFNPPPARVFGCRVLELKEEGVSEEEAMAVADMEYRAEKKAKRMA 120

Query: 121 YSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQ 180
           Y+RLKQI RLQGKK PPNPYPSAIKEIQAEERK+VRDRFF+PKI +I +++KEE+AA MQ
Sbjct: 121 YARLKQITRLQGKKLPPNPYPSAIKEIQAEERKYVRDRFFDPKILKIVEKMKEEKAAVMQ 180

Query: 181 DRMRGSGW 189
           DRMRG GW
Sbjct: 181 DRMRGGGW 188

[Close]
BLAST of CmoCh04G017530 vs. TrEMBL
Match: M5XDT5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011996mg PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 3.6e-80
Identity = 154/189 (81.48%), Postives = 173/189 (91.53%), Query Frame = 1 

Query: 1   MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVKKFF 60
           MSFMKGDLLTRTRKLVKGLAKAEP+WLKAME+ PP TFPR D  I+ ITLPEDVY+KKFF
Sbjct: 1   MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMERVPPVTFPRADA-IQKITLPEDVYIKKFF 60

Query: 61  QKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKA 120
           QKHPDSK+EDAIKF +FDPPPARIFGLRVLELKEQGVSE+EAMAVA+MEYR E+K KK A
Sbjct: 61  QKHPDSKHEDAIKFSAFDPPPARIFGLRVLELKEQGVSEQEAMAVADMEYRMERKGKKMA 120

Query: 121 YSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQ 180
           YSRLK+IARLQGKKPPPNPYPSAIKEIQAEE+K+VRDRFFNP+I++I ++L+EE AAE Q
Sbjct: 121 YSRLKKIARLQGKKPPPNPYPSAIKEIQAEEKKYVRDRFFNPRIRQILRKLQEEHAAERQ 180

Query: 181 DRMRGSGWS 190
           D +RG G S
Sbjct: 181 DGLRGEGGS 188

[Close]
BLAST of CmoCh04G017530 vs. TAIR10
Match: AT1G26750.1 (AT1G26750.1 unknown protein)

HSP 1 Score: 205.7 bits (522), Expect = 2.5e-53
Identity = 102/186 (54.84%), Postives = 134/186 (72.04%), Query Frame = 1 

Query: 1   MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVKKFF 60
           MS+MKGDLL++TR+LV GLA  EP+WLKAME +PPP FPR +G I+ I LPED YV+KF 
Sbjct: 1   MSWMKGDLLSKTRRLVGGLATREPVWLKAMEASPPPVFPRSNGKIQKIVLPEDPYVRKFA 60

Query: 61  QKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKA 120
            KHP +K +D  K  +F P  AR++G RVLELKE G+SE +AM+VANMEY +E+K  KKA
Sbjct: 61  NKHPGTKIDDPAKISAFIPDQARVYGCRVLELKEHGISEGDAMSVANMEYLSERKEMKKA 120

Query: 121 YSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQ 180
           Y RLK++A +Q K PPP PYPSA K +  + +   +DRF  P ++ +  +LK E+   +Q
Sbjct: 121 YKRLKELAVMQDKDPPPKPYPSAKKGLITQSKTSAKDRFQTPSVRRLVNQLKNEKDVLLQ 180

Query: 181 DRMRGS 187
           DR  GS
Sbjct: 181 DRTGGS 186

[Close]
BLAST of CmoCh04G017530 vs. NCBI nr
Match: gi|449434772|ref|XP_004135170.1| (PREDICTED: uncharacterized protein LOC101217717 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 2.1e-86
Identity = 165/185 (89.19%), Postives = 174/185 (94.05%), Query Frame = 1 

Query: 1   MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVKKFF 60
           MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPP+FPR+DGTIKTITLPEDVYVKKFF
Sbjct: 1   MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFF 60

Query: 61  QKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKA 120
           +KHPDS Y DAIKFC F+PPPARIF  RVLELKEQGV+EEEAM VANMEYRAEKK KK A
Sbjct: 61  KKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEEEAMTVANMEYRAEKKMKKNA 120

Query: 121 YSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQ 180
           YSRLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ
Sbjct: 121 YSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQ 180

Query: 181 DRMRG 186
           +R  G
Sbjct: 181 ERTGG 185

[Close]
BLAST of CmoCh04G017530 vs. NCBI nr
Match: gi|659091137|ref|XP_008446390.1| (PREDICTED: uncharacterized protein LOC103489146 [Cucumis melo])

HSP 1 Score: 324.7 bits (831), Expect = 1.1e-85
Identity = 164/188 (87.23%), Postives = 175/188 (93.09%), Query Frame = 1 

Query: 1   MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVKKFF 60
           MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG ++ ITLPEDVYVKKFF
Sbjct: 1   MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGKVQKITLPEDVYVKKFF 60

Query: 61  QKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKA 120
           QKHPDS Y DAIKF  F+P PARIF  RVLELKEQGVSEEEAMA ANMEYRAEKK KKKA
Sbjct: 61  QKHPDSAYHDAIKFLDFNPVPARIFAWRVLELKEQGVSEEEAMAAANMEYRAEKKMKKKA 120

Query: 121 YSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQ 180
           YSRLKQIARLQGKKPPPNP+PSAIK+IQAEERK+VRDRFFNPKIKEIAQRLKEE+AAEMQ
Sbjct: 121 YSRLKQIARLQGKKPPPNPFPSAIKQIQAEERKYVRDRFFNPKIKEIAQRLKEEKAAEMQ 180

Query: 181 DRMRGSGW 189
           +R RG GW
Sbjct: 181 ERKRG-GW 187

[Close]
BLAST of CmoCh04G017530 vs. NCBI nr
Match: gi|225462908|ref|XP_002264571.1| (PREDICTED: uncharacterized protein LOC100267719 [Vitis vinifera])

HSP 1 Score: 317.4 bits (812), Expect = 1.7e-83
Identity = 156/188 (82.98%), Postives = 174/188 (92.55%), Query Frame = 1 

Query: 1   MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVKKFF 60
           MSFMKGDLL RTRKLVKGLAKAEP+WLKAME+APPPTFPR DG +K I+LPED Y++KFF
Sbjct: 1   MSFMKGDLLARTRKLVKGLAKAEPVWLKAMERAPPPTFPRPDGKVKKISLPEDFYIQKFF 60

Query: 61  QKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKA 120
           QKHPDSKYEDAIK  +F+PPPAR+FG RVLELKEQGVSEEEAMAVA+MEYRAEKKAKK A
Sbjct: 61  QKHPDSKYEDAIKISAFNPPPARVFGCRVLELKEQGVSEEEAMAVADMEYRAEKKAKKMA 120

Query: 121 YSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQ 180
           Y+RLKQIARLQGK+ PPNPYPSAIKEIQAEERK+VRDRFFNPKI +I +++KEE+AA MQ
Sbjct: 121 YARLKQIARLQGKRLPPNPYPSAIKEIQAEERKYVRDRFFNPKILKIVEKMKEEKAAAMQ 180

Query: 181 DRMRGSGW 189
           DRMRG GW
Sbjct: 181 DRMRGGGW 188

[Close]
BLAST of CmoCh04G017530 vs. NCBI nr
Match: gi|147816504|emb|CAN72786.1| (hypothetical protein VITISV_039509 [Vitis vinifera])

HSP 1 Score: 308.5 bits (789), Expect = 7.9e-81
Identity = 153/185 (82.70%), Postives = 171/185 (92.43%), Query Frame = 1 

Query: 1   MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVKKFF 60
           MSFMKGDLL RTRKLVKGLAKAEP+WLKAME+APPPTFPR DG +K I+LPED Y++KFF
Sbjct: 1   MSFMKGDLLARTRKLVKGLAKAEPVWLKAMERAPPPTFPRPDGKVKKISLPEDFYIQKFF 60

Query: 61  QKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKA 120
           QKHPDSKYEDAIK  +F+PPPAR+FG RVLELKEQGVSEEEAMAVA+MEYRAEKKAKK A
Sbjct: 61  QKHPDSKYEDAIKISAFNPPPARVFGCRVLELKEQGVSEEEAMAVADMEYRAEKKAKKMA 120

Query: 121 YSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQ 180
           Y+RLKQIA LQGK+ PPNPYPSAIKEIQAEERK+VRDRFFNPKI +I +++KEE+AA MQ
Sbjct: 121 YARLKQIAXLQGKRLPPNPYPSAIKEIQAEERKYVRDRFFNPKILKIVEKMKEEKAAAMQ 180

Query: 181 DRMRG 186
           DRMRG
Sbjct: 181 DRMRG 185

[Close]
BLAST of CmoCh04G017530 vs. NCBI nr
Match: gi|645254106|ref|XP_008232884.1| (PREDICTED: uncharacterized protein LOC103331976 [Prunus mume])

HSP 1 Score: 308.5 bits (789), Expect = 7.9e-81
Identity = 155/189 (82.01%), Postives = 174/189 (92.06%), Query Frame = 1 

Query: 1   MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVKKFF 60
           MSFMKGDLLTRTRKLVKGLAKAEP+WLKAME+ PP TFPR D  I+ ITLPEDVY+KKFF
Sbjct: 1   MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMERVPPVTFPRADA-IQKITLPEDVYIKKFF 60

Query: 61  QKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKA 120
           QKHPDSK+EDAIKF +FDPPPARIFGLRVLELKEQGVSE+EAMAVA+MEYR E+K KK A
Sbjct: 61  QKHPDSKHEDAIKFSAFDPPPARIFGLRVLELKEQGVSEQEAMAVADMEYRMERKGKKMA 120

Query: 121 YSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQ 180
           YSRLK+IARLQGKKPPPNPYPSAIKEIQAEE+K+VRDRFFNP+I++I ++L+EE AAE Q
Sbjct: 121 YSRLKKIARLQGKKPPPNPYPSAIKEIQAEEKKYVRDRFFNPRIRQILRKLQEEHAAERQ 180

Query: 181 DRMRGSGWS 190
           DR+RG G S
Sbjct: 181 DRLRGEGGS 188

The following BLAST results are available for this feature:
BLAST of CmoCh04G017530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh04G017530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQQ3_CUCSA1.5e-8689.19Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606340 PE=4 SV=1[more]
D7UBH7_VITVI1.2e-8382.98Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0261g00010 PE=4 SV=... [more]
A5BWQ2_VITVI5.5e-8182.70Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039509 PE=4 SV=1[more]
D7T9W5_VITVI2.1e-8079.79Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00510 PE=4 SV=... [more]
M5XDT5_PRUPE3.6e-8081.48Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011996mg PE=4 SV=1[more]
BLAST of CmoCh04G017530 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26750.12.5e-5354.84 unknown protein[more]
BLAST of CmoCh04G017530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434772|ref|XP_004135170.1|2.1e-8689.19PREDICTED: uncharacterized protein LOC101217717 [Cucumis sativus][more]
gi|659091137|ref|XP_008446390.1|1.1e-8587.23PREDICTED: uncharacterized protein LOC103489146 [Cucumis melo][more]
gi|225462908|ref|XP_002264571.1|1.7e-8382.98PREDICTED: uncharacterized protein LOC100267719 [Vitis vinifera][more]
gi|147816504|emb|CAN72786.1|7.9e-8182.70hypothetical protein VITISV_039509 [Vitis vinifera][more]
gi|645254106|ref|XP_008232884.1|7.9e-8182.01PREDICTED: uncharacterized protein LOC103331976 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042546 cell wall biogenesis
biological_process GO:0036065 fucosylation
biological_process GO:0001575 globoside metabolic process
biological_process GO:0009247 glycolipid biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G017530.1CmoCh04G017530.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35693FAMILY NOT NAMEDcoord: 2..189
score: 4.2
NoneNo IPR availablePANTHERPTHR35693:SF1SUBFAMILY NOT NAMEDcoord: 2..189
score: 4.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G017530Cucsa.284860Cucumber (Gy14) v1cgycmoB0797
CmoCh04G017530CmaCh04G016740Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G017530Cla010204Watermelon (97103) v1cmowmB698
CmoCh04G017530Csa5G606340Cucumber (Chinese Long) v2cmocuB715
CmoCh04G017530MELO3C012117Melon (DHL92) v3.5.1cmomeB645
CmoCh04G017530ClCG05G024080Watermelon (Charleston Gray)cmowcgB659
CmoCh04G017530CSPI05G23970Wild cucumber (PI 183967)cmocpiB723
CmoCh04G017530Lsi04G003990Bottle gourd (USVL1VR-Ls)cmolsiB671
CmoCh04G017530Cp4.1LG01g12360Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G017530MELO3C012117.2Melon (DHL92) v3.6.1cmomedB735
CmoCh04G017530CsaV3_5G032960Cucumber (Chinese Long) v3cmocucB0847
CmoCh04G017530Cla97C05G106090Watermelon (97103) v2cmowmbB734
CmoCh04G017530Bhi07G001256Wax gourdcmowgoB0903
CmoCh04G017530CsGy5G023500Cucumber (Gy14) v2cgybcmoB627
CmoCh04G017530Carg14393Silver-seed gourdcarcmoB0343
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G017530Watermelon (97103) v2cmowmbB773
CmoCh04G017530Watermelon (97103) v2cmowmbB726
CmoCh04G017530Wax gourdcmowgoB0841
CmoCh04G017530Wax gourdcmowgoB0885
CmoCh04G017530Wax gourdcmowgoB0917
CmoCh04G017530Cucurbita moschata (Rifu)cmocmoB124
CmoCh04G017530Cucurbita moschata (Rifu)cmocmoB268
CmoCh04G017530Cucurbita moschata (Rifu)cmocmoB340
CmoCh04G017530Cucurbita moschata (Rifu)cmocmoB363
CmoCh04G017530Cucumber (Gy14) v1cgycmoB0270
CmoCh04G017530Cucumber (Gy14) v1cgycmoB0443
CmoCh04G017530Cucumber (Gy14) v1cgycmoB0591
CmoCh04G017530Cucurbita maxima (Rimu)cmacmoB423
CmoCh04G017530Cucurbita maxima (Rimu)cmacmoB481
CmoCh04G017530Wild cucumber (PI 183967)cmocpiB685
CmoCh04G017530Wild cucumber (PI 183967)cmocpiB738
CmoCh04G017530Cucumber (Chinese Long) v2cmocuB673
CmoCh04G017530Cucumber (Chinese Long) v2cmocuB674
CmoCh04G017530Cucumber (Chinese Long) v2cmocuB730
CmoCh04G017530Melon (DHL92) v3.5.1cmomeB630
CmoCh04G017530Melon (DHL92) v3.5.1cmomeB663
CmoCh04G017530Melon (DHL92) v3.5.1cmomeB666
CmoCh04G017530Watermelon (Charleston Gray)cmowcgB652
CmoCh04G017530Watermelon (97103) v1cmowmB716
CmoCh04G017530Watermelon (97103) v1cmowmB741
CmoCh04G017530Cucurbita pepo (Zucchini)cmocpeB647
CmoCh04G017530Bottle gourd (USVL1VR-Ls)cmolsiB633
CmoCh04G017530Bottle gourd (USVL1VR-Ls)cmolsiB642
CmoCh04G017530Cucumber (Gy14) v2cgybcmoB119
CmoCh04G017530Cucumber (Gy14) v2cgybcmoB120
CmoCh04G017530Cucumber (Gy14) v2cgybcmoB644
CmoCh04G017530Melon (DHL92) v3.6.1cmomedB718
CmoCh04G017530Melon (DHL92) v3.6.1cmomedB749
CmoCh04G017530Melon (DHL92) v3.6.1cmomedB753
CmoCh04G017530Silver-seed gourdcarcmoB0071
CmoCh04G017530Silver-seed gourdcarcmoB0142
CmoCh04G017530Cucumber (Chinese Long) v3cmocucB0798
CmoCh04G017530Cucumber (Chinese Long) v3cmocucB0799
CmoCh04G017530Cucumber (Chinese Long) v3cmocucB0864