CmoCh04G015010 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G015010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Single-stranded nucleic acid-binding protein R3H
Location	Cmo_Chr04 : 7677732 .. 7682892 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAACAAAAAAAGATGCGAGAGGATATCGTGCGCGTCGCAGGCACGCAACCTTTGACATGGTCTGAAACCATTCAACCTTTTCATCATCAAATCGAATCGTACCCGTTGCCAAATTCTCTCTACACTTCTGATTTTTCTTCTTCCGCCTCCGTCACGGTGGTCGAAAGTCGAAACCCTAATCTCTAAATGCAATTCCGATCCCGAAATTCGCCTGCTACCTCGATCTCCTGTTTGGGGGCCTTTATTCTCTGATATTTCATGACTCACTTTGTGGCAGGACTTTAGTGTTCTCCTCTTTCGTCTCCCCATGGAGGGCTCTGCGGTTGAGGATCTCGGAGCACCGGAGTCATGGGAGGTCGCGAATTTGGACGAGGCCATGAGCCGATTGATGCTCCCCTCTTCGTCTCCTACGAAGAATTCCAAATCATTGGATAACTCTTTTGACGATGCTGCTCCAGCTTCTCATTTCTCATCCGCTTCATTTCCATCTCTTCCCTCCTCGGCTTCTTCTACCATCGATAGGGTTCCCGAGGATGTTGTCAATCAGGTTGATCAGTTCCTTCTCGAGGCTTTGAATAACCCTCGGGAGCGTCTATCAAGTAAGTCGTTTATTTAGCTTTCATGTATTATGGATGGTGTGATTGCTTTCGGTGAAAAGTTGCAGACTACGGCCATCTCGAATTTTGTGGAAAAAGCAATATTGTGGAACCTATGCTTAGAAAGAAAAAATAGAATGTGTTTTAGTGTCAAAGATCAACTATGACAAGTTAAAATAGGAATCTAAAATGGTTTCAAGCCACATATAGAATTAAGTAATTTAATGTCAGAAAATCTATGGCCAGGTAGCTGCTTCATTGAGCTGGAATATCTTGGGTGCTTGGATAAAAGAGATAGATTTTGTGGCTTAATGCACTATAAGCTTTCATCTGGGGTGACTATGAGCAGAAAGACAAGGGGGCTATTTAAAGGAAAATGGGTTTGGGAAAGGCTCTTAGATTTAGATGAATTTCATTCCTCTGGTTGGTCTGCGCTTTCCAATTCCATTTATAATTATACTCCATCTTTATCAAATCAAAGTGGAGTCAGTTTTGTCACTCATAATTTATGGGCACTGTTTATATTGTTGAAAACATGGTGTTTACGATTTATACCCCTTAACGGATGATATTGAATATTTATCATTGCTTTAGTTTTGCGCATGGAGCAAGATGTTGAGAAATTTATCCGGGATCCTGCTCGACAACAGCTAGAGTTCCAGCAGTTGCCTACTTCATATTTACGGCTAGCTGCCCATCGGGTGGCCCAACATTATTCACTGCAGTCCATGGTTCTATTGGACAATAGTTTACCTGATGGATCTGGTTCCAAAATTATTGTTAGTAAGACTTCTGAATGCCGTCTTCCAGCTATCCGCCTTGCAGATATTCCCGTAAATCTTCCAACAGAGGAAAATAGTACCATGAAGGTTGCTATCAAACAGAGGCCACAGAAACGGTCTCAAGTAGCTAAAGATGCCAGTGCCAATTCATCGAAAACAAGTGGCTCCAAAAGTGTGGAAGAAAGGAAGGAGGAGTATAATAAAGCTCGTGCTCGTATATTCAATTGCAGCAGTAATTCAGGTAGTCATGCAGGTGTGAAAGTAGATGCCGATCCTAGACTACAGGATAGTTATCGTGGTTCCTTGGGTGCTGCAAAGGTTGAGGAGAAGATGATTTCAGGAGTTCCTGATACAAATTTTAGTAGGGGCTTGATTGACTGTTCTACGAGTAGCAGTAGAATAAGTAGAAGTAGGACTGACAAGGAGCTTCCTATAAGGCAGGTGCACAAACCAAATAGTAGGGTAGCCATTTTTAGAGATCGTGAGATCGATATCAAGGATCCTGATTATGACAGGAGCTATGATAGGTACGGAATGCAATCATTTTTCTCTTGGCCTGATCTCAATTTTTTTTCAATTGTCTGCTTCTTTTGGTAGGAGATGGATGAACCGGTTTTTGAATAGATCCAAAGCTTCCCATTTATTCTCTCTTGACCTCTTTACCGTGTTCCTGTTGAGATAAACAATTTGAATTAAATACATTTTATTATTAATTGGTGACAGTTAGGGTTCTCTAAATTTTTTTTGAGGATTAATCATGTGCAAACATTTATTACAGAACATAACTTTTTATGATACACAAAGTAAGGTATTTTCAAGTCATGAATCAACTGCTAGACGATGAAGTAACAAGCTGTTAATTGACAAGCGTGACTTTTCTATTTAGAAATTTTAACATCAGAGGTGCATCCTGACTTTTATTGTTGGGATAGTAATTTAGCCAAATTTCTGGTTGTAAAATCCTTCTTCAGGTATATGCAGAGATTCGACCCTGGGTTTGGCTTCAGTGGCGGCCCATACACTGTGCAGCCCATGTATGCTCCTGCAGTGAACTACAACACTGAATTTCCACAACTTGGCTCTGCTCATAGACAGGCTGTTTCAGAATGTCAGCCTAGACCACTCCCTTCCCACGTACCTGGGCCATGGAATGCCCAATCATCTCCTGCAGGTTTGGGGTATGGTCATCGAGAAGCAATGGTTAGACCTTTTAATCCAAATGTCGATGCGCATTCATCTTCTGGTGTATATCTGCATTCCTCTCAGTATCCCGGTCAGCAGTCTGGAATGCATTTTATCCATCCTCATGAACAAACTTATCAACCTTTTACACAGGTTTAGACTTTTCAACTGTTTTATTGAATTTGAATTTTTGGTGCAACAAACTTTTTATTCCAAAGCTATTCTCTTTCTTGGATATTTGTGCTGGTGATATTTTATCAGTAGCTATCCTACCGCTTGTAAGTGATCACCCCACTGGACGTATAACTCTTCGAATCTTCCTGCAAGTGATTACAGTTATAAGTCAAAAAAGGGCAGTTAGTCAAAGAAAAAAAAAGAGAAAATTAGCGAGCAAAGTTTCCTTTTGTGCGTAGTTAAAGACAATGTAGCAGAGTGTGTTCTTTTTCACTCGCACACCATTTTGATCCTGATCTTATGATTTTGCAGCAATACCAACAGCAACCAGATGCAGGTTTTGGTTTAGCACGGCCCCGGTGAGGGGCATGGGCCATGCCTGCTCCCTGCCATCTGGTAGTTAAAATATATCGTGGGCTTTTCAGTGCACATTTATTTACTTGAAATGGCAGGGGGCAGGCATAAAGAACTGATGTGGGCATAGAAGAAGGATTTACATTTTCTGGGACTTGATATGCTTCTTCCCACCATCAGTTTCCTGGGAGCTTCTTGCATCTCTTATAGTTGATGAAGAAACTCATTGCTTTGGAACTTGCGTTAGTAGGCTGAGCTGTTCAGGTTGCTCTTGCCACTGATAATGATGAAAAGTTAAATATAAGAATCAACAATTTGCTGGGAATGTTCCTGCAAGATCTTGGACGAAGGTATGGGATTCTTTTAACGTTATATTAACTGCCACCCTGCCTACCCTACCTGCTCACTCTCTCTAAGTTGAACTTAAAAGAAACGTGATAAAATGAGAACGGGGGTAAAAAAGTGTCATTCTGTAATATTTGTTGGCTTTTTGTCTGTGCATATAGTTGTAAGCATTAACAAAGAATTATCATTTTCTCTGGTTCTGTAGTTCTAACTTTCTAAGGTTACAGTCAATGGAAGGTGAGATTATTGTTGAAAGGATGTTGGAGGCTGTTGATTCTGAACTAGGGGATTTCTTCATTTCATGTTTGGTCTCCACAATCCTGCGCTTTGCACTGTCGTACGTGACTTTTAGATGACCATCTGTTCGTGTTTTTGATAGTCCTAAATGGATATTCCGACAGCTATATGACATGGAAAATTCTGTTGGTCTCTAATTTTTAATGATTATCTTCTATGGCATAGCCATCCTGGCCTATCATCATCATATCTCTAGACCAGGAATCATTTGCATTTTTCCTGAGATTTCTTTTGTGTCATGGATGATTGGTTTAATATCTTTTTGAGTGTTCATGACTGGTTTAATATCTTCTTGGAGTATTCTTTTGTTTGGCTTCTCATCTACCATGAGGTTTTGTTCCAGTTCTTCAGTTATTTTGTCGACATTTTCAGCATACGGGAGGATATGGTTTTTCGTCATTGCAAAACTAGAGCTGTGCTTGTAAGAATGCCTAAAATTTGGTGAAATGGAATGTCATGGAAGAAAGATCAGTCACACAACCCAGAGAAGATCAAACATGGGAAAAATGTTCGGATCAATGAGATCTGTTGCTGCAGCTCGAGTACCATTTGGAAATCTCAGAATTTCGTCAACATCGATTTCTCGTTTTTGCTCTGAACTCTACCAAATCCTGTAAGTGCTCAGATTAGTTTTGATTTCATTTTAATGATGCTACCACCAGGGAAGATCCTTAAAATTAACAACACTTGCGATGCCTTCTTGTTGCAAGGACAAAGATGGATGCGTGGGACGGAAAGCGTGTTTCATTTCCTGATCATCTTTAGCAGTTCGAGCAAATCTGGGAATCGGCTACACATGGGATCGAGTGGCAATTTCACCCTTGATGGGCAGGTATGTAATCTTTAGAAACGCAGCCTCGGTCTGTGTCGAGCTTTGATGAAAAATGGAGGGTTCTCTTTGCGAATCCGCATCAAGTTCGTACTTCGAATGTAAGTTGAGGGATATGCCTCAACCAGCTTACGGCATACACCATATCTTCAGCTTCTCTTATCCTGAAGAATCTCGGTATCATTACTTCAACACCTTTCTATATTTTGTTTAATATAATTTTAGACTGATTGTATATGATGAATGTTAATTATAGGTTCTGAACATTGTTGTGGAGAAGAAGTTGAGACTGTTTGGAAGTTCTCTTCGATTTTCAATCTGATTTTTTGAAAAGATCATTGAAATTTTGTTTATTCAAGTGCTTTTCCCTTGGTTTGGCCCACTCCCCACTCGTTGAACAACCAAAAAAAGCTCCAAATGTGGCAGTTTTTAAGCTTCAAATAGGGTATTAGTTAGTCATCTTAGTGTCAAAACGATGTGACAACAGACAAGTCGATAATAAATATTCTCCCTTTTAGGAATTCTTTATGAAACTAGAACTCCTTGAAAACTATCGGTAATTTTTATGGGATTTATCAGTCTAAGCAGGAGACAATATAC

mRNA sequence

ACAAACAAAAAAAGATGCGAGAGGATATCGTGCGCGTCGCAGGCACGCAACCTTTGACATGGTCTGAAACCATTCAACCTTTTCATCATCAAATCGAATCGTACCCGTTGCCAAATTCTCTCTACACTTCTGATTTTTCTTCTTCCGCCTCCGTCACGGTGGTCGAAAGTCGAAACCCTAATCTCTAAATGCAATTCCGATCCCGAAATTCGCCTGCTACCTCGATCTCCTGTTTGGGGGCCTTTATTCTCTGATATTTCATGACTCACTTTGTGGCAGGACTTTAGTGTTCTCCTCTTTCGTCTCCCCATGGAGGGCTCTGCGGTTGAGGATCTCGGAGCACCGGAGTCATGGGAGGTCGCGAATTTGGACGAGGCCATGAGCCGATTGATGCTCCCCTCTTCGTCTCCTACGAAGAATTCCAAATCATTGGATAACTCTTTTGACGATGCTGCTCCAGCTTCTCATTTCTCATCCGCTTCATTTCCATCTCTTCCCTCCTCGGCTTCTTCTACCATCGATAGGGTTCCCGAGGATGTTGTCAATCAGGTTGATCAGTTCCTTCTCGAGGCTTTGAATAACCCTCGGGAGCGTCTATCAATTTTGCGCATGGAGCAAGATGTTGAGAAATTTATCCGGGATCCTGCTCGACAACAGCTAGAGTTCCAGCAGTTGCCTACTTCATATTTACGGCTAGCTGCCCATCGGGTGGCCCAACATTATTCACTGCAGTCCATGGTTCTATTGGACAATAGTTTACCTGATGGATCTGGTTCCAAAATTATTGTTAGTAAGACTTCTGAATGCCGTCTTCCAGCTATCCGCCTTGCAGATATTCCCGTAAATCTTCCAACAGAGGAAAATAGTACCATGAAGGTTGCTATCAAACAGAGGCCACAGAAACGGTCTCAAGTAGCTAAAGATGCCAGTGCCAATTCATCGAAAACAAGTGGCTCCAAAAGTGTGGAAGAAAGGAAGGAGGAGTATAATAAAGCTCGTGCTCGTATATTCAATTGCAGCAGTAATTCAGGTAGTCATGCAGGTGTGAAAGTAGATGCCGATCCTAGACTACAGGATAGTTATCGTGGTTCCTTGGGTGCTGCAAAGGTTGAGGAGAAGATGATTTCAGGAGTTCCTGATACAAATTTTAGTAGGGGCTTGATTGACTGTTCTACGAGTAGCAGTAGAATAAGTAGAAGTAGGACTGACAAGGAGCTTCCTATAAGGCAGGTGCACAAACCAAATAGTAGGGTAGCCATTTTTAGAGATCGTGAGATCGATATCAAGGATCCTGATTATGACAGGAGCTATGATAGGTATATGCAGAGATTCGACCCTGGGTTTGGCTTCAGTGGCGGCCCATACACTGTGCAGCCCATGTATGCTCCTGCAGTGAACTACAACACTGAATTTCCACAACTTGGCTCTGCTCATAGACAGGCTGTTTCAGAATGTCAGCCTAGACCACTCCCTTCCCACGTACCTGGGCCATGGAATGCCCAATCATCTCCTGCAGGTTTGGGGTATGGTCATCGAGAAGCAATGGTTAGACCTTTTAATCCAAATGTCGATGCGCATTCATCTTCTGGTGTATATCTGCATTCCTCTCAGTATCCCGGTCAGCAGTCTGGAATGCATTTTATCCATCCTCATGAACAAACTTATCAACCTTTTACACAGCAATACCAACAGCAACCAGATGCAGGTTTTGGTTTAGCACGGCCCCGAAGAAGGATTTACATTTTCTGGGACTTGATATGCTTCTTCCCACCATCAGTTTCCTGGGAGCTTCTTGCATCTCTTATAGTTGCTCTTGCCACTGATAATGATGAAAAGTTAAATATAAGAATCAACAATTTGCTGGGAATGTTCCTGCAAGATCTTGGACGAAGCATACGGGAGGATATGGTTTTTCGTCATTGCAAAACTAGAGCTGTGCTTCTCGAGTACCATTTGGAAATCTCAGAATTTCGTCAACATCGATTTCTCGTTTTTGCTCTGAACTCTACCAAATCCTGACAAAGATGGATGCGTGGGACGGAAAGCGTGTTTCATTTCCTGATCATCTTTAGCAGTTCGAGCAAATCTGGGAATCGGCTACACATGGGATCGAGTGGCAATTTCACCCTTGATGGGCAGGTATGTAATCTTTAGAAACGCAGCCTCGGTCTGTGTCGAGCTTTGATGAAAAATGGAGGGTTCTCTTTGCGAATCCGCATCAAGTTCGTACTTCGAATGTAAGTTGAGGGATATGCCTCAACCAGCTTACGGCATACACCATATCTTCAGCTTCTCTTATCCTGAAGAATCTCGGTATCATTACTTCAACACCTTTCTATATTTTGTTTAATATAATTTTAGACTGATTGTATATGATGAATGTTAATTATAGGTTCTGAACATTGTTGTGGAGAAGAAGTTGAGACTGTTTGGAAGTTCTCTTCGATTTTCAATCTGATTTTTTGAAAAGATCATTGAAATTTTGTTTATTCAAGTGCTTTTCCCTTGGTTTGGCCCACTCCCCACTCGTTGAACAACCAAAAAAAGCTCCAAATGTGGCAGTTTTTAAGCTTCAAATAGGGTATTAGTTAGTCATCTTAGTGTCAAAACGATGTGACAACAGACAAGTCGATAATAAATATTCTCCCTTTTAGGAATTCTTTATGAAACTAGAACTCCTTGAAAACTATCGGTAATTTTTATGGGATTTATCAGTCTAAGCAGGAGACAATATAC

Coding sequence (CDS)

ATGGAGGGCTCTGCGGTTGAGGATCTCGGAGCACCGGAGTCATGGGAGGTCGCGAATTTGGACGAGGCCATGAGCCGATTGATGCTCCCCTCTTCGTCTCCTACGAAGAATTCCAAATCATTGGATAACTCTTTTGACGATGCTGCTCCAGCTTCTCATTTCTCATCCGCTTCATTTCCATCTCTTCCCTCCTCGGCTTCTTCTACCATCGATAGGGTTCCCGAGGATGTTGTCAATCAGGTTGATCAGTTCCTTCTCGAGGCTTTGAATAACCCTCGGGAGCGTCTATCAATTTTGCGCATGGAGCAAGATGTTGAGAAATTTATCCGGGATCCTGCTCGACAACAGCTAGAGTTCCAGCAGTTGCCTACTTCATATTTACGGCTAGCTGCCCATCGGGTGGCCCAACATTATTCACTGCAGTCCATGGTTCTATTGGACAATAGTTTACCTGATGGATCTGGTTCCAAAATTATTGTTAGTAAGACTTCTGAATGCCGTCTTCCAGCTATCCGCCTTGCAGATATTCCCGTAAATCTTCCAACAGAGGAAAATAGTACCATGAAGGTTGCTATCAAACAGAGGCCACAGAAACGGTCTCAAGTAGCTAAAGATGCCAGTGCCAATTCATCGAAAACAAGTGGCTCCAAAAGTGTGGAAGAAAGGAAGGAGGAGTATAATAAAGCTCGTGCTCGTATATTCAATTGCAGCAGTAATTCAGGTAGTCATGCAGGTGTGAAAGTAGATGCCGATCCTAGACTACAGGATAGTTATCGTGGTTCCTTGGGTGCTGCAAAGGTTGAGGAGAAGATGATTTCAGGAGTTCCTGATACAAATTTTAGTAGGGGCTTGATTGACTGTTCTACGAGTAGCAGTAGAATAAGTAGAAGTAGGACTGACAAGGAGCTTCCTATAAGGCAGGTGCACAAACCAAATAGTAGGGTAGCCATTTTTAGAGATCGTGAGATCGATATCAAGGATCCTGATTATGACAGGAGCTATGATAGGTATATGCAGAGATTCGACCCTGGGTTTGGCTTCAGTGGCGGCCCATACACTGTGCAGCCCATGTATGCTCCTGCAGTGAACTACAACACTGAATTTCCACAACTTGGCTCTGCTCATAGACAGGCTGTTTCAGAATGTCAGCCTAGACCACTCCCTTCCCACGTACCTGGGCCATGGAATGCCCAATCATCTCCTGCAGGTTTGGGGTATGGTCATCGAGAAGCAATGGTTAGACCTTTTAATCCAAATGTCGATGCGCATTCATCTTCTGGTGTATATCTGCATTCCTCTCAGTATCCCGGTCAGCAGTCTGGAATGCATTTTATCCATCCTCATGAACAAACTTATCAACCTTTTACACAGCAATACCAACAGCAACCAGATGCAGGTTTTGGTTTAGCACGGCCCCGAAGAAGGATTTACATTTTCTGGGACTTGATATGCTTCTTCCCACCATCAGTTTCCTGGGAGCTTCTTGCATCTCTTATAGTTGCTCTTGCCACTGATAATGATGAAAAGTTAAATATAAGAATCAACAATTTGCTGGGAATGTTCCTGCAAGATCTTGGACGAAGCATACGGGAGGATATGGTTTTTCGTCATTGCAAAACTAGAGCTGTGCTTCTCGAGTACCATTTGGAAATCTCAGAATTTCGTCAACATCGATTTCTCGTTTTTGCTCTGAACTCTACCAAATCCTGA

Homology

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BLAST of CmoCh04G015010 vs. Swiss-Prot
Match: R3HD2_MOUSE (R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 8.9e-11
Identity = 53/158 (33.54%), Postives = 87/158 (55.06%), Query Frame = 1


Query: 83  QFLLEALN-NPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQ 142
           +FL+  L  NPR+R+ +L++EQ++  FI D   Q  +F Q+ TSY R+  HRVA ++ + 
Sbjct: 156 EFLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQFKKFPQM-TSYHRMLLHRVAAYFGMD 215

Query: 143 SMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEENSTMKVAIKQRPQKRSQ 202
             V       D +G  +I++KTS  R+P  R ++   ++  E+N+  +   ++   KR  
Sbjct: 216 HNV-------DQTGKAVIINKTSSTRIPEQRFSE---HIKDEKNTEFQ---QRFILKRDD 275

Query: 203 VAKDASANSSKT-----SGSKSVEERKEEYNKARARIF 235
            + D   N  +        SKS+EER+EEY + R RIF
Sbjct: 276 ASMDRDDNQMRVPLQDGRRSKSIEEREEEYQRVRERIF 299

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BLAST of CmoCh04G015010 vs. Swiss-Prot
Match: R3HD2_BOVIN (R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.2e-10
Identity = 53/158 (33.54%), Postives = 87/158 (55.06%), Query Frame = 1


Query: 83  QFLLEALN-NPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQ 142
           +FL+  L  NPR+R+ +L++EQ++  FI D   Q  +F Q+ TSY R+  HRVA ++ + 
Sbjct: 156 EFLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQFKKFPQM-TSYHRMLLHRVAAYFGMD 215

Query: 143 SMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEENSTMKVAIKQRPQKRSQ 202
             V       D +G  +I++KTS  R+P  R ++   ++  E+N+  +   ++   KR  
Sbjct: 216 HNV-------DQTGKAVIINKTSNTRIPEQRFSE---HIKDEKNTEFQ---QRFILKRDD 275

Query: 203 VAKDASANSSKT-----SGSKSVEERKEEYNKARARIF 235
            + D   N  +        SKS+EER+EEY + R RIF
Sbjct: 276 ASMDRDDNQIRVPLQDGRRSKSIEEREEEYQRVRERIF 299

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BLAST of CmoCh04G015010 vs. Swiss-Prot
Match: ARP21_MOUSE (cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 7.5e-10
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 1


Query: 84  FLLEAL-NNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQS 143
           FL+  L NN R+R+ +L+MEQ++  FI D      +F Q+ +SY R+  HRVA ++ L  
Sbjct: 151 FLINTLKNNSRDRMILLKMEQEMIDFIADSNNHYKKFPQM-SSYQRMLVHRVAAYFGLDH 210

Query: 144 MVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEENSTMKVAIKQRPQKRSQV 203
            V       D +G  +I++KTS  R+P  R  +   +  +EE+       K+   KR   
Sbjct: 211 NV-------DQTGKSVIINKTSSTRIPEQRFCEHLKDEKSEESQ------KRFILKRDNS 270

Query: 204 AKDASANSSKTSG------SKSVEERKEEYNKARARIF 235
           + D   N ++         SKS+EER+EEY + R RIF
Sbjct: 271 SIDKEDNQNRMHPFRDDRRSKSIEEREEEYQRVRERIF 294

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BLAST of CmoCh04G015010 vs. Swiss-Prot
Match: ARP21_HUMAN (cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 2.2e-09
Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 1


Query: 83  QFLLEAL-NNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQ 142
           +FL+  L NN R+R+ +L+MEQ++  FI D      +F Q+ +SY R+  HRVA ++ L 
Sbjct: 151 EFLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQM-SSYQRMLVHRVAAYFGLD 210

Query: 143 SMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEENSTMKVAIKQRPQKRSQ 202
             V       D +G  +I++KTS  R+P  R  +   +   EE+       K+   KR  
Sbjct: 211 HNV-------DQTGKSVIINKTSSTRIPEQRFCEHLKDEKGEESQ------KRFILKRDN 270

Query: 203 VAKDASANSSKTSG-------SKSVEERKEEYNKARARIF 235
            + D   N             SKS+EER+EEY + R RIF
Sbjct: 271 SSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIF 296

[Close]

BLAST of CmoCh04G015010 vs. Swiss-Prot
Match: R3HD1_HUMAN (R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3)

HSP 1 Score: 60.8 bits (146), Expect = 5.4e-08
Identity = 71/256 (27.73%), Postives = 121/256 (47.27%), Query Frame = 1


Query: 7   EDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFPSLPSSA 66
           E+   P + E++  ++   ++ L  S   +   S D +  + A      S   P    S 
Sbjct: 86  EESPPPPAPEISQENQEKIQIQLTQSFEKEEKPSKDEAEKEKA------SDKLPRKMLSR 145

Query: 67  SSTIDRVPEDVVNQVDQFLLEAL-NNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTS 126
            S+ +      ++ + +FL+  L NNPR+R+ +L++EQ++  FI +    + +F  + TS
Sbjct: 146 DSSQEYTDSTGID-LHEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPM-TS 205

Query: 127 YLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEEN 186
           Y R+  HRVA ++ L   V       D SG  +IV+KTS  R+P  +  +   ++  ++ 
Sbjct: 206 YHRMLLHRVAAYFGLDHNV-------DQSGKSVIVNKTSNTRIPDQKFNE---HIKDDKG 265

Query: 187 STMKVAIKQRPQKRSQVAKDASANSSKTS-----GSKSVEERKEEYNKARARIFNCSSNS 246
              +   K+   KR   + D   N  +        SKS+EER+EEY +AR RIF+  S  
Sbjct: 266 EDFQ---KRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDSLC 317

Query: 247 GSHAGVKVDADPRLQD 257
                +    D RLQD
Sbjct: 326 SQENYI---IDKRLQD 317

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BLAST of CmoCh04G015010 vs. TrEMBL
Match: A0A0A0KRF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G615180 PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 8.0e-192
Identity = 344/374 (91.98%), Postives = 355/374 (94.92%), Query Frame = 1


Query: 101 MEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV 160
           MEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV
Sbjct: 1   MEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV 60

Query: 161 SKTSECRLPAIRLADIPVNLPTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVE 220
            KTSECRLP IRLADIPVNLP EENS+MKVAIKQRPQKRSQ+A+D +ANSSK+SGSKSVE
Sbjct: 61  RKTSECRLPTIRLADIPVNLPAEENSSMKVAIKQRPQKRSQLARDGNANSSKSSGSKSVE 120

Query: 221 ERKEEYNKARARIFNCSSNSGSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDTNF 280
           ERKEEYNKARARIFN SSNSGSHAG KVD DPR QD+YRGSL AAKVEEKMI GVPDTNF
Sbjct: 121 ERKEEYNKARARIFNSSSNSGSHAGGKVDTDPRPQDNYRGSLSAAKVEEKMIPGVPDTNF 180

Query: 281 SRGLIDCSTSSSRISRSRTDKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQR 340
           SRGLIDCSTSSSRISRSRTDKELP RQ +KPNSRVAIFRDREID KDPDYDRSYDRYMQR
Sbjct: 181 SRGLIDCSTSSSRISRSRTDKELPSRQ-YKPNSRVAIFRDREIDSKDPDYDRSYDRYMQR 240

Query: 341 FDPGFGFSGGPYTVQPMYAPAVNYNTEFPQLGSAHRQAVSECQPRPL-PSHVPGPWNAQS 400
           FDPGFGFSGGPY VQPMYAPAVNYNTEFPQLGSAHRQAVSECQ RPL P HVPGPWN QS
Sbjct: 241 FDPGFGFSGGPYPVQPMYAPAVNYNTEFPQLGSAHRQAVSECQQRPLPPPHVPGPWNTQS 300

Query: 401 SPAGLGYGHREAMVRPFNPNVDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQY 460
           SPAGLGYGHREAM+RPFNPNVDAHSSSGVYLHSSQYPGQQ+GMHFIHPHEQT+QPF+QQY
Sbjct: 301 SPAGLGYGHREAMIRPFNPNVDAHSSSGVYLHSSQYPGQQTGMHFIHPHEQTHQPFSQQY 360

Query: 461 QQQPDAGFGLARPR 474
           QQQPDA FGLARPR
Sbjct: 361 QQQPDASFGLARPR 373

[Close]

BLAST of CmoCh04G015010 vs. TrEMBL
Match: F6HVQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0106g00640 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 1.7e-170
Identity = 334/477 (70.02%), Postives = 387/477 (81.13%), Query Frame = 1


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSA +DLGAPESWEVA+LDE+MSRLML SSS  K+S S  +S D + PAS  +SAS P
Sbjct: 1   MEGSA-DDLGAPESWEVADLDESMSRLMLSSSSSKKDSSS-SSSLDASVPAS--ASASAP 60

Query: 61  SLPSSASST-IDRVPEDVVNQVDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEF 120
           +L SS+       + ED VNQVDQFL EAL NPRERLSILRMEQD+EKFI DP +QQLEF
Sbjct: 61  ALSSSSVPVGSGMISEDSVNQVDQFLREALQNPRERLSILRMEQDIEKFIHDPTQQQLEF 120

Query: 121 QQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVN 180
           QQLPTSYLRLAAHRVAQHYSLQSMVLLDN+LPDGSGSKIIV KTSECRLP IRLADIPV+
Sbjct: 121 QQLPTSYLRLAAHRVAQHYSLQSMVLLDNNLPDGSGSKIIVRKTSECRLPLIRLADIPVS 180

Query: 181 LPTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSN 240
           LP E+   +KVAIKQRPQKRSQ    A+++S K + SKSVEERKEEYN+ARARIFN SS 
Sbjct: 181 LPPEDGGVIKVAIKQRPQKRSQNVSCANSHSFKANNSKSVEERKEEYNRARARIFNSSSF 240

Query: 241 SGSHAGVKVDADPRLQDSYR-GSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSR 300
           SG+  G K + +PR+QD+++ GS+   K+EEK ++G  D N  RGL+D STSS+R +RSR
Sbjct: 241 SGTGGG-KPECEPRMQDTFQHGSVSLPKMEEKPVAGSSDVNICRGLVDSSTSSNRSARSR 300

Query: 301 TDKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMY 360
            +KE PI + +KPN+RVAIFRDREID KDPDYDRSYDRY+QRFDPGFGF+GGPYT+QPMY
Sbjct: 301 AEKE-PIGR-YKPNNRVAIFRDREIDRKDPDYDRSYDRYLQRFDPGFGFNGGPYTIQPMY 360

Query: 361 APAVNYNTEFPQLGSAHRQAVS-ECQPRPLPSHVPGPWNAQSSPAGLGYGHREAMVRPFN 420
            PAVNYNTEFPQLGSAHR  +S E QPRPLP H+ GPW A S+P G+GYGH E M+ PFN
Sbjct: 361 TPAVNYNTEFPQLGSAHRPQISTEHQPRPLPQHLSGPWPAPSTPTGIGYGHPETMMSPFN 420

Query: 421 PN-VDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 474
           PN V A S+S +YL SSQYP Q+ GM FIHPHE  +QPF+Q +QQQPD  FGLARPR
Sbjct: 421 PNHVGARSTSTLYLPSSQYPCQRPGMPFIHPHEHVHQPFSQSHQQQPDTSFGLARPR 470

[Close]

BLAST of CmoCh04G015010 vs. TrEMBL
Match: M5WGG5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005527mg PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 4.3e-169
Identity = 328/476 (68.91%), Postives = 379/476 (79.62%), Query Frame = 1


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGS VEDLGAPESWEVA LDEAM+RLML S+   K+SK  D   +D +P          
Sbjct: 1   MEGSVVEDLGAPESWEVAGLDEAMNRLMLSSN---KDSKPQD--LNDVSP---------- 60

Query: 61  SLPSSASSTIDRVPEDVVNQVDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
            L SSAS   D+  ED +NQVDQFL EAL NPRERLSILRMEQDVEKFIRDP +QQLEFQ
Sbjct: 61  -LVSSASDASDKFSEDALNQVDQFLREALQNPRERLSILRMEQDVEKFIRDPIQQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDN+LPDGSGS+IIV KTSECRLP IRLADIPV+L
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNNLPDGSGSRIIVRKTSECRLPQIRLADIPVSL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           P+E+    KVAIKQRPQKRSQ A +A++NS+K + SK+VEERKEEYN+ARARIFN S N 
Sbjct: 181 PSEDGGVTKVAIKQRPQKRSQTANNANSNSAKANSSKTVEERKEEYNRARARIFNSSINM 240

Query: 241 GSHAGVKVDADPRLQDS-YRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRT 300
              +  K +++PR+QD+     L   KVE+K  S V D +  RGLI+ STSSSR +RSR 
Sbjct: 241 SGSSSGKSESEPRMQDTPQHVPLVMPKVEDK--SSVSDLHSGRGLIESSTSSSRTARSRP 300

Query: 301 DKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYA 360
           +KE P+ + +KPN+RVAIFRDREID KDPDYDRSYDRYMQRFDPGFGF+GGPYT+QPMY 
Sbjct: 301 EKE-PVGR-YKPNNRVAIFRDREIDRKDPDYDRSYDRYMQRFDPGFGFTGGPYTIQPMYT 360

Query: 361 PAVNYNTEFPQLGSAHRQAVS-ECQPRPLPSHVPGPWNAQSSPAGLGYGHREAMVRPFNP 420
           PA+NYNTEFPQLG+AHR  +S E QPRPLP H+PGPW A S PAG+GYGH E ++ PFN 
Sbjct: 361 PALNYNTEFPQLGAAHRPQISTEHQPRPLPQHLPGPWVAPSVPAGIGYGHPETIITPFNA 420

Query: 421 N-VDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 474
           N V A S+SG+YLHSSQYP Q+ GM F+HPHE  +QPF+Q +QQQPDA FGLARPR
Sbjct: 421 NHVGARSTSGIYLHSSQYPCQRPGMPFLHPHEHIHQPFSQSHQQQPDASFGLARPR 456

[Close]

BLAST of CmoCh04G015010 vs. TrEMBL
Match: A0A061FWE8_THECC (Single-stranded nucleic acid binding R3H protein isoform 1 OS=Theobroma cacao GN=TCM_043919 PE=4 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 3.6e-168
Identity = 328/480 (68.33%), Postives = 375/480 (78.12%), Query Frame = 1


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           M+GS VEDLGAPESWEVA+LD  MSRLML S+   K                       P
Sbjct: 1   MDGSVVEDLGAPESWEVADLDATMSRLMLSSNKEPK-----------------------P 60

Query: 61  SLP----SSASSTIDRVPEDVVNQVDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQ 120
            LP    SSASS    + EDV NQVDQFL EA+ NPRERLSILRMEQDVEKFI DP +QQ
Sbjct: 61  ELPDAISSSASSAEKVIAEDVTNQVDQFLREAIQNPRERLSILRMEQDVEKFIHDPTQQQ 120

Query: 121 LEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADI 180
           LEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDN+LPDGSG +IIV KTSECRLP IRLADI
Sbjct: 121 LEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNNLPDGSGFRIIVRKTSECRLPPIRLADI 180

Query: 181 PVNLPTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNC 240
           PVNLP+E+   +KVAIKQRPQKRSQV+ ++++NS KT+ SKSVEERKEEYN+ARARIFN 
Sbjct: 181 PVNLPSEDPGVVKVAIKQRPQKRSQVSCNSNSNSLKTNNSKSVEERKEEYNRARARIFN- 240

Query: 241 SSNSGSHAGVKVDADPRLQD-SYRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRIS 300
           S++S S +G K + + RLQD SY GS G  K+EEK +S V D N SRGLI+ STSSSR++
Sbjct: 241 SNSSSSGSGGKPENELRLQDVSYHGSSGMPKMEEKPVSVVSDINSSRGLIESSTSSSRLA 300

Query: 301 RSRTDKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQ 360
           RSRT+KE PI +  KPN+RVAIFRDRE D KDPDYDRSYDRY+QRFDPGFGF+ GPYT+Q
Sbjct: 301 RSRTEKE-PIGR-SKPNNRVAIFRDRETDRKDPDYDRSYDRYLQRFDPGFGFNSGPYTMQ 360

Query: 361 PMYAPAVNYNTEFPQLGSAHRQAVS-ECQPRPLPSHVPGPWNAQSSPAGLGYGHREAMVR 420
           PMY PA+NYNTEFPQLG+ HR  +S E QPR LP H+PGPW A S+  G+ YGH E M+ 
Sbjct: 361 PMYTPAINYNTEFPQLGTTHRPQISTEHQPRALPQHIPGPWAAPSTATGISYGHPETMMP 420

Query: 421 PFNPN-VDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 474
           PFNPN V AHS+S +YLHSSQYP Q+ GM FIHPHE  +QPF+Q +QQQPDA FGLARPR
Sbjct: 421 PFNPNHVGAHSTSAIYLHSSQYPCQRPGMPFIHPHEHVHQPFSQSHQQQPDASFGLARPR 454

[Close]

BLAST of CmoCh04G015010 vs. TrEMBL
Match: A0A067KI62_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10418 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 3.4e-166
Identity = 326/476 (68.49%), Postives = 373/476 (78.36%), Query Frame = 1


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGS VEDLGAPESWEVA+LDE MSRLML  S       S + S D     +  S     
Sbjct: 1   MEGSVVEDLGAPESWEVADLDETMSRLMLKDSKRDCKQSSQELSIDSPTSVNSGSVLGSG 60

Query: 61  SLPSSASSTIDRVPEDVVNQVDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           S  S   +    V ED++NQVDQFL EAL NPRERLSILRMEQDVEKFI DP +QQLEFQ
Sbjct: 61  SSASGTGTGDKVVSEDLINQVDQFLREALQNPRERLSILRMEQDVEKFICDPTQQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSL SMVLLDN+LPDGSGS+IIV KTSECRLP++RLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLPSMVLLDNNLPDGSGSRIIVRKTSECRLPSVRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           P+E++S +KVAIKQRPQKR Q   +++++S KT+ SKSVEERKEEYN+ARARIFN SS  
Sbjct: 181 PSEDSSVVKVAIKQRPQKRPQTVNNSNSSSLKTNNSKSVEERKEEYNRARARIFN-SSGF 240

Query: 241 GSHAGVKVDADPRLQD-SYRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRT 300
            S A  K + +PRLQD S  G LG  K EEK +SG  D N SRG I+ S SS+R +R+R 
Sbjct: 241 SSGASGKPEGEPRLQDGSQHGLLGIFKTEEKPVSGNLDINSSRGSIESSISSNRSTRTRI 300

Query: 301 DKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYA 360
           +KE PI + +KPN+RVAIFRDREID KDPDYDRSYDRYMQRFDPGFGF+GGPYT+QPMY 
Sbjct: 301 EKE-PISR-YKPNNRVAIFRDREIDRKDPDYDRSYDRYMQRFDPGFGFNGGPYTLQPMYT 360

Query: 361 PAVNYNTEFPQLGSAHRQAVS-ECQPRPLPSHVPGPWNAQSSPAGLGYGHREAMVRPFNP 420
           PA+NYNTEFPQLGS+HR  +S E QPRPLP H+ GPW A S+PAG+GYGH E M+ PFNP
Sbjct: 361 PALNYNTEFPQLGSSHRPQISTEHQPRPLPQHLHGPWAAPSNPAGIGYGHPETMLPPFNP 420

Query: 421 N-VDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 474
           N V A S+S +YLHSSQYP Q+ GM FIHPHE   QPF+Q +QQQPDA FGLARPR
Sbjct: 421 NHVGARSTSAIYLHSSQYPCQRPGMPFIHPHEHV-QPFSQSHQQQPDASFGLARPR 472

[Close]

BLAST of CmoCh04G015010 vs. TAIR10
Match: AT3G10770.1 (AT3G10770.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 173.3 bits (438), Expect = 4.2e-43
Identity = 129/312 (41.35%), Postives = 176/312 (56.41%), Query Frame = 1


Query: 81  VDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSL 140
           VD FL+EAL NPR RL+ILRME D++KF ++P + Q EF   PTSYLRLAAHRVAQHY L
Sbjct: 11  VDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVAQHYGL 70

Query: 141 QSMVLLDN--SLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTE-ENSTMKVAIKQRPQ 200
            +M  LDN     DGS ++I+V+KT+E R P + L++IPV  P        K+AIK RP+
Sbjct: 71  VTMA-LDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFKIAIKPRPK 130

Query: 201 KRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNSGSHAGVKVDADPRLQDS 260
           + S      S +  + +  +SVEERKEEY+KARARIFN  S+S S            +DS
Sbjct: 131 RGSGCG--GSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDS------------EDS 190

Query: 261 YRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTDKELPIRQVHKPNSRVAI 320
              SL    +E      V +T  +R   + + ++S +     D            SRVAI
Sbjct: 191 --SSLRPPSLE------VRNTCINRNETEVAVNNSPVDAVTRDS--------GRTSRVAI 250

Query: 321 FRDREIDIKDPDYDRSYDRYMQRFDPGFGF-----SGGPYTVQPMYAPAVNYNTEFPQLG 380
            RDRE D  DPDYDRSYDRY+   DP + +     SG  ++  P++ P   ++  FP + 
Sbjct: 251 IRDREKDRYDPDYDRSYDRYV--VDPAYRYVRVMPSGQSFSPMPIHIPF--HDGFFPHMP 287

Query: 381 SAHRQAVSECQP 385
             H+  ++   P
Sbjct: 311 RGHQANLNYGHP 287

[Close]

BLAST of CmoCh04G015010 vs. TAIR10
Match: AT3G56680.1 (AT3G56680.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 167.2 bits (422), Expect = 3.0e-41
Identity = 144/408 (35.29%), Postives = 205/408 (50.25%), Query Frame = 1


Query: 62  LPSSASSTIDRVPEDVVNQVDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEFQQ 121
           LP +A  T   V  D    VD FL+EAL+N R RL+ILRME DV++ +++P +QQ EFQ 
Sbjct: 5   LPETAVVTGGSVIGDYGFNVDPFLVEALHNSRHRLTILRMELDVQRLLQNPEQQQFEFQH 64

Query: 122 LPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNLP 181
            PTSYLRLAAHRVA HY L + V    S  DG+ ++I+V+KT+E + PA+RL++IPV   
Sbjct: 65  FPTSYLRLAAHRVANHYGLATAV--QESGADGNENRILVTKTTESKFPAVRLSEIPVAKQ 124

Query: 182 TEEN--STMKVAIKQRPQKRSQVAKDASANSSKTSGS-KSVEERKEEYNKARARIFNCSS 241
           +E     + KV+IK RP K S      + +  K  G  +SVEERKEEY+KAR RIF+   
Sbjct: 125 SENGKFESRKVSIKTRPSKGSGY---GAGDLEKNRGPLRSVEERKEEYDKARERIFS--- 184

Query: 242 NSGSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDTNFSRGL-IDCSTSSSRISRS 301
                 G+  D        Y  +   ++ ++K +S        + L I  S  +SR+   
Sbjct: 185 ---GLTGLSCDDSSSETQVYERNASLSR-DDKQVSKNAYVEVKKNLSIRESGPTSRV--- 244

Query: 302 RTDKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPM 361
                             AIFRDRE D  DPDYDR + RY++       F+  P+ +Q +
Sbjct: 245 ------------------AIFRDREKDRFDPDYDRRHQRYIRSLPVNQNFNLPPFNIQQI 304

Query: 362 YAPAVNYNTEFPQLGSAHRQAVSECQPRPLPSHVPGPWNAQSSPAGLGYG-HREAMVRPF 421
             P   Y   F                    + +P P      PA LG+G H  +++ P+
Sbjct: 305 --PTPYYEMGFTGY-----------------NQIPSP------PAPLGFGPHPSSIMSPY 344

Query: 422 NPNVDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQ-QYQQQP 464
              +DA     +Y+H   +P   + M + HP+EQ      Q Q+ QQP
Sbjct: 365 GTTMDA-----MYMH---WP--NAAMMYAHPYEQFRNGSLQAQFVQQP 344

[Close]

BLAST of CmoCh04G015010 vs. TAIR10
Match: AT5G05100.1 (AT5G05100.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-39
Identity = 116/293 (39.59%), Postives = 163/293 (55.63%), Query Frame = 1


Query: 81  VDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSL 140
           VD FL+EAL NPR RL+ILRME D++KF + P +QQ EFQ LPTSYLRL AHRVAQHY L
Sbjct: 11  VDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIAHRVAQHYGL 70

Query: 141 QSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEENST--MKVAIKQRPQK 200
            +  L    + DGSG++I+ +KT E R P + L++IPV  P         K+AIK RP +
Sbjct: 71  FTTALEGGGV-DGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGFKIAIKPRPNR 130

Query: 201 RSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNSGSHAGVKVDADPRLQDSY 260
            +      S +  + +  +SVEERKEEY+KARARIFN  S+S S         P      
Sbjct: 131 GA--GGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSTRAPPPPYP--- 190

Query: 261 RGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTDKELPIRQVHKPNSRVAIF 320
                  +++ K  +  P  N +  +++ +++   + R+   ++          SRVAI 
Sbjct: 191 -------RLDSKHNTACPSRNETEVVVNYNSNPVDVERNGVIRD------SGRTSRVAII 250

Query: 321 RDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAPAVNYNTEFPQL 372
           RDRE D  DPDYDR  +RY++   P   F+       P+  P   ++  FPQ+
Sbjct: 251 RDREKDRYDPDYDR--NRYVRVAPPVQNFN-------PIPIPLPFHDAIFPQM 275

[Close]

BLAST of CmoCh04G015010 vs. TAIR10
Match: AT2G40960.1 (AT2G40960.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 152.9 bits (385), Expect = 5.9e-37
Identity = 126/339 (37.17%), Postives = 172/339 (50.74%), Query Frame = 1


Query: 81  VDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSL 140
           VD FL+EAL NPR RL+ILRME DV++F++ P +QQ EFQ  PTSYLR AAHRVA HY L
Sbjct: 21  VDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLRFAAHRVANHYGL 80

Query: 141 QSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPV-NLPTEENSTMKVAIKQRPQKR 200
            + V   +   DG+ S+I+V+K+S+ R PA RL++IPV    T +   MKV IK RP K 
Sbjct: 81  ITSV--RDGGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEHMKVVIKPRPTKG 140

Query: 201 SQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNSGSHAGVKVDADPRLQDS-- 260
           S +  D      K    KSVEERKE+Y++ARARIFN          V +D +    ++  
Sbjct: 141 SGMEGD----ELKGGLLKSVEERKEDYDRARARIFN--------GLVNIDCNDSSSETNP 200

Query: 261 YRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTDKELPIRQVHKPNSRVAI 320
           +R +  +++ E +++          G I+     + ISR    K  P  ++       AI
Sbjct: 201 WRVNCSSSRDENQVL--------KNGNIE--ADKNNISR----KSNPASRI-------AI 260

Query: 321 FRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAPAVNYN------TEFPQL 380
            RDRE D  DPDYDRS  RY+             + +Q M  P  +        T  P L
Sbjct: 261 LRDREKDRYDPDYDRSNYRYISNLPVDQNLCVAHFNIQTMGTPIYDMGFRGYSPTAPPSL 320

Query: 381 GSAHRQAVSECQPRPL--PSHVPGPWNAQSSPAGLGYGH 409
                  +S C    L  PS     +    + A + Y H
Sbjct: 321 NLGQHSVMSPCVTTGLNQPSRDAAMYMQWPNAAAVMYTH 324

[Close]

BLAST of CmoCh04G015010 vs. NCBI nr
Match: gi|659091848|ref|XP_008446764.1| (PREDICTED: R3H domain-containing protein 2-like [Cucumis melo])

HSP 1 Score: 833.6 bits (2152), Expect = 2.1e-238
Identity = 433/474 (91.35%), Postives = 449/474 (94.73%), Query Frame = 1


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSAVEDLGAPESWEVA+LDEAMSRLMLPSSSP KNSKSLD +  DAAPA HFSSASFP
Sbjct: 1   MEGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPKKNSKSLDVA--DAAPAYHFSSASFP 60

Query: 61  SLPSSASSTIDRVPEDVVNQVDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           SL +SASS +DRV ED +NQVDQFL EAL+NPRERLSILRMEQDVEKFIRDPARQQLEFQ
Sbjct: 61  SLSASASSALDRVSEDAINQVDQFLREALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV KTSECR PAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRHPAIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           PTEENS+MKVAIKQRPQKRSQ+A+DASANSSKTSGSKSVEERKEEYNKARARIF+ SSNS
Sbjct: 181 PTEENSSMKVAIKQRPQKRSQLARDASANSSKTSGSKSVEERKEEYNKARARIFSSSSNS 240

Query: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTD 300
           GSHAG KVDADPR QDSYRGSL AAKVEEKMI G+PDTNFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSHAGGKVDADPRPQDSYRGSLSAAKVEEKMIPGIPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360
           KELP RQ +KPNSRVAIFRDREID KDPDYDRSYDRYMQRFDPGFGFSGGPY VQPMYAP
Sbjct: 301 KELPSRQ-YKPNSRVAIFRDREIDSKDPDYDRSYDRYMQRFDPGFGFSGGPYPVQPMYAP 360

Query: 361 AVNYNTEFPQLGSAHRQAVSECQPRPL-PSHVPGPWNAQSSPAGLGYGHREAMVRPFNPN 420
           AVNYNTEFPQLGSAHRQAVSECQPRPL P HVPGPWN QSSPAGLGYGHREAM+RPFNPN
Sbjct: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLPPPHVPGPWNTQSSPAGLGYGHREAMIRPFNPN 420

Query: 421 VDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 474
           VDAHSSSGVYLHSSQYPGQQ+GMHFIHPHEQT+QPF+QQYQQQPDA FGLARPR
Sbjct: 421 VDAHSSSGVYLHSSQYPGQQTGMHFIHPHEQTHQPFSQQYQQQPDASFGLARPR 471

[Close]

BLAST of CmoCh04G015010 vs. NCBI nr
Match: gi|778706333|ref|XP_011655833.1| (PREDICTED: R3H domain-containing protein 2-like [Cucumis sativus])

HSP 1 Score: 818.1 bits (2112), Expect = 9.2e-234
Identity = 425/474 (89.66%), Postives = 442/474 (93.25%), Query Frame = 1


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSAVEDLGAPESWEVA+LDEAMSRLMLPSSSP KNSKSLD +  DAA A HFS+ASFP
Sbjct: 1   MEGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPKKNSKSLDVA--DAAAAYHFSTASFP 60

Query: 61  SLPSSASSTIDRVPEDVVNQVDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           SL  SA S +DRV ED +NQVDQFL EAL+NPRERLSILRMEQDVEKFIRDPARQQLEFQ
Sbjct: 61  SLSGSAYSALDRVSEDAINQVDQFLREALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV KTSECRLP IRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPTIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           P EENS+MKVAIKQRPQKRSQ+A+D +ANSSK+SGSKSVEERKEEYNKARARIFN SSNS
Sbjct: 181 PAEENSSMKVAIKQRPQKRSQLARDGNANSSKSSGSKSVEERKEEYNKARARIFNSSSNS 240

Query: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTD 300
           GSHAG KVD DPR QD+YRGSL AAKVEEKMI GVPDTNFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSHAGGKVDTDPRPQDNYRGSLSAAKVEEKMIPGVPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360
           KELP RQ +KPNSRVAIFRDREID KDPDYDRSYDRYMQRFDPGFGFSGGPY VQPMYAP
Sbjct: 301 KELPSRQ-YKPNSRVAIFRDREIDSKDPDYDRSYDRYMQRFDPGFGFSGGPYPVQPMYAP 360

Query: 361 AVNYNTEFPQLGSAHRQAVSECQPRPL-PSHVPGPWNAQSSPAGLGYGHREAMVRPFNPN 420
           AVNYNTEFPQLGSAHRQAVSECQ RPL P HVPGPWN QSSPAGLGYGHREAM+RPFNPN
Sbjct: 361 AVNYNTEFPQLGSAHRQAVSECQQRPLPPPHVPGPWNTQSSPAGLGYGHREAMIRPFNPN 420

Query: 421 VDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 474
           VDAHSSSGVYLHSSQYPGQQ+GMHFIHPHEQT+QPF+QQYQQQPDA FGLARPR
Sbjct: 421 VDAHSSSGVYLHSSQYPGQQTGMHFIHPHEQTHQPFSQQYQQQPDASFGLARPR 471

[Close]

BLAST of CmoCh04G015010 vs. NCBI nr
Match: gi|700197016|gb|KGN52193.1| (hypothetical protein Csa_5G615180 [Cucumis sativus])

HSP 1 Score: 678.3 bits (1749), Expect = 1.1e-191
Identity = 344/374 (91.98%), Postives = 355/374 (94.92%), Query Frame = 1


Query: 101 MEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV 160
           MEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV
Sbjct: 1   MEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV 60

Query: 161 SKTSECRLPAIRLADIPVNLPTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVE 220
            KTSECRLP IRLADIPVNLP EENS+MKVAIKQRPQKRSQ+A+D +ANSSK+SGSKSVE
Sbjct: 61  RKTSECRLPTIRLADIPVNLPAEENSSMKVAIKQRPQKRSQLARDGNANSSKSSGSKSVE 120

Query: 221 ERKEEYNKARARIFNCSSNSGSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDTNF 280
           ERKEEYNKARARIFN SSNSGSHAG KVD DPR QD+YRGSL AAKVEEKMI GVPDTNF
Sbjct: 121 ERKEEYNKARARIFNSSSNSGSHAGGKVDTDPRPQDNYRGSLSAAKVEEKMIPGVPDTNF 180

Query: 281 SRGLIDCSTSSSRISRSRTDKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQR 340
           SRGLIDCSTSSSRISRSRTDKELP RQ +KPNSRVAIFRDREID KDPDYDRSYDRYMQR
Sbjct: 181 SRGLIDCSTSSSRISRSRTDKELPSRQ-YKPNSRVAIFRDREIDSKDPDYDRSYDRYMQR 240

Query: 341 FDPGFGFSGGPYTVQPMYAPAVNYNTEFPQLGSAHRQAVSECQPRPL-PSHVPGPWNAQS 400
           FDPGFGFSGGPY VQPMYAPAVNYNTEFPQLGSAHRQAVSECQ RPL P HVPGPWN QS
Sbjct: 241 FDPGFGFSGGPYPVQPMYAPAVNYNTEFPQLGSAHRQAVSECQQRPLPPPHVPGPWNTQS 300

Query: 401 SPAGLGYGHREAMVRPFNPNVDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQY 460
           SPAGLGYGHREAM+RPFNPNVDAHSSSGVYLHSSQYPGQQ+GMHFIHPHEQT+QPF+QQY
Sbjct: 301 SPAGLGYGHREAMIRPFNPNVDAHSSSGVYLHSSQYPGQQTGMHFIHPHEQTHQPFSQQY 360

Query: 461 QQQPDAGFGLARPR 474
           QQQPDA FGLARPR
Sbjct: 361 QQQPDASFGLARPR 373

[Close]

BLAST of CmoCh04G015010 vs. NCBI nr
Match: gi|1009119449|ref|XP_015876388.1| (PREDICTED: uncharacterized protein LOC107413048 [Ziziphus jujuba])

HSP 1 Score: 616.7 bits (1589), Expect = 4.1e-173
Identity = 336/485 (69.28%), Postives = 388/485 (80.00%), Query Frame = 1


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGS  EDLGAPESWEVA+LDE+MSRLML  SS  K+SK+    F D + AS  SSAS  
Sbjct: 1   MEGSVQEDLGAPESWEVADLDESMSRLML--SSSRKDSKT-HLEFADVSSASASSSASSS 60

Query: 61  SLPSSASSTI---------DRVPEDVVNQVDQFLLEALNNPRERLSILRMEQDVEKFIRD 120
           S  S +SS+          D VP+D++NQVDQFL EAL NPRERLSILRMEQDVEKFI D
Sbjct: 61  SSVSDSSSSAAVGGGGAGGDMVPDDLINQVDQFLREALQNPRERLSILRMEQDVEKFIHD 120

Query: 121 PARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAI 180
           P +QQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLD++  DGSGS+IIV KT+ECRLP I
Sbjct: 121 PTQQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDSNSSDGSGSRIIVRKTNECRLPLI 180

Query: 181 RLADIPVNLPTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARA 240
           RLADIPVNLP+EENS +KVAIKQRPQKRSQ    A++NS K+S SKSVEERKEEYNKARA
Sbjct: 181 RLADIPVNLPSEENSALKVAIKQRPQKRSQNVNSANSNSIKSSNSKSVEERKEEYNKARA 240

Query: 241 RIFNCSSNSGSHAGVKVDADPRLQD-SYRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTS 300
           RIFN SSN    A  K +++ RLQD S  GSLG +K+E+K +S +P+ N  RG ID STS
Sbjct: 241 RIFNSSSNINIGASGKQESELRLQDGSQHGSLGISKLEDKSVSVIPEINSGRGFIDSSTS 300

Query: 301 SSRISRSRTDKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGG 360
           S R +RSR +KE  +R  ++PN+RVAIFRDRE+D KDPDYDRSYDRYMQRFDPGFGF+GG
Sbjct: 301 SVRAARSRIEKEPVVR--YRPNNRVAIFRDREVDRKDPDYDRSYDRYMQRFDPGFGFNGG 360

Query: 361 PYTVQPMYAPAVNYNTEFPQLGSAHRQAVS-ECQPRPLPSHVPGPWNAQSSPAGLGYGHR 420
           PYT+QPMY PA+NYNTEFPQLGS HR  +S E QPRPLP H+PGPW A S+PAGLGYGH 
Sbjct: 361 PYTIQPMYTPALNYNTEFPQLGSTHRPQISAEPQPRPLPQHLPGPWAAPSAPAGLGYGHP 420

Query: 421 EAMVRPFNP-NVDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFG 474
           E ++ PFNP +V A S+SG+Y+HSSQYP Q+ GM FIHPHE  +Q F+Q +QQQPDA FG
Sbjct: 421 ETIMTPFNPSHVGARSASGMYMHSSQYPCQRPGMPFIHPHEHVHQQFSQSHQQQPDASFG 480

[Close]

BLAST of CmoCh04G015010 vs. NCBI nr
Match: gi|359486966|ref|XP_002265099.2| (PREDICTED: cAMP-regulated phosphoprotein 21 [Vitis vinifera])

HSP 1 Score: 607.4 bits (1565), Expect = 2.5e-170
Identity = 334/477 (70.02%), Postives = 387/477 (81.13%), Query Frame = 1


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSA +DLGAPESWEVA+LDE+MSRLML SSS  K+S S  +S D + PAS  +SAS P
Sbjct: 1   MEGSA-DDLGAPESWEVADLDESMSRLMLSSSSSKKDSSS-SSSLDASVPAS--ASASAP 60

Query: 61  SLPSSASST-IDRVPEDVVNQVDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEF 120
           +L SS+       + ED VNQVDQFL EAL NPRERLSILRMEQD+EKFI DP +QQLEF
Sbjct: 61  ALSSSSVPVGSGMISEDSVNQVDQFLREALQNPRERLSILRMEQDIEKFIHDPTQQQLEF 120

Query: 121 QQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVN 180
           QQLPTSYLRLAAHRVAQHYSLQSMVLLDN+LPDGSGSKIIV KTSECRLP IRLADIPV+
Sbjct: 121 QQLPTSYLRLAAHRVAQHYSLQSMVLLDNNLPDGSGSKIIVRKTSECRLPLIRLADIPVS 180

Query: 181 LPTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSN 240
           LP E+   +KVAIKQRPQKRSQ    A+++S K + SKSVEERKEEYN+ARARIFN SS 
Sbjct: 181 LPPEDGGVIKVAIKQRPQKRSQNVSCANSHSFKANNSKSVEERKEEYNRARARIFNSSSF 240

Query: 241 SGSHAGVKVDADPRLQDSYR-GSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSR 300
           SG+  G K + +PR+QD+++ GS+   K+EEK ++G  D N  RGL+D STSS+R +RSR
Sbjct: 241 SGTGGG-KPECEPRMQDTFQHGSVSLPKMEEKPVAGSSDVNICRGLVDSSTSSNRSARSR 300

Query: 301 TDKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMY 360
            +KE PI + +KPN+RVAIFRDREID KDPDYDRSYDRY+QRFDPGFGF+GGPYT+QPMY
Sbjct: 301 AEKE-PIGR-YKPNNRVAIFRDREIDRKDPDYDRSYDRYLQRFDPGFGFNGGPYTIQPMY 360

Query: 361 APAVNYNTEFPQLGSAHRQAVS-ECQPRPLPSHVPGPWNAQSSPAGLGYGHREAMVRPFN 420
            PAVNYNTEFPQLGSAHR  +S E QPRPLP H+ GPW A S+P G+GYGH E M+ PFN
Sbjct: 361 TPAVNYNTEFPQLGSAHRPQISTEHQPRPLPQHLSGPWPAPSTPTGIGYGHPETMMSPFN 420

Query: 421 PN-VDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 474
           PN V A S+S +YL SSQYP Q+ GM FIHPHE  +QPF+Q +QQQPD  FGLARPR
Sbjct: 421 PNHVGARSTSTLYLPSSQYPCQRPGMPFIHPHEHVHQPFSQSHQQQPDTSFGLARPR 470

The following BLAST results are available for this feature:

BLAST of CmoCh04G015010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
R3HD2_MOUSE	8.9e-11	33.54	R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2	[more]
R3HD2_BOVIN	1.2e-10	33.54	R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1	[more]
ARP21_MOUSE	7.5e-10	34.18	cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2	[more]
ARP21_HUMAN	2.2e-09	33.75	cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2	[more]
R3HD1_HUMAN	5.4e-08	27.73	R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3	[more]

BLAST of CmoCh04G015010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRF5_CUCSA	8.0e-192	91.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G615180 PE=4 SV=1	[more]
F6HVQ2_VITVI	1.7e-170	70.02	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0106g00640 PE=4 SV=...	[more]
M5WGG5_PRUPE	4.3e-169	68.91	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005527mg PE=4 SV=1	[more]
A0A061FWE8_THECC	3.6e-168	68.33	Single-stranded nucleic acid binding R3H protein isoform 1 OS=Theobroma cacao GN...	[more]
A0A067KI62_JATCU	3.4e-166	68.49	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10418 PE=4 SV=1	[more]

BLAST of CmoCh04G015010 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10770.1	4.2e-43	41.35	Single-stranded nucleic acid binding R3H protein	[more]
AT3G56680.1	3.0e-41	35.29	Single-stranded nucleic acid binding R3H protein	[more]
AT5G05100.1	1.7e-39	39.59	Single-stranded nucleic acid binding R3H protein	[more]
AT2G40960.1	5.9e-37	37.17	Single-stranded nucleic acid binding R3H protein	[more]

BLAST of CmoCh04G015010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091848\|ref\|XP_008446764.1\|	2.1e-238	91.35	PREDICTED: R3H domain-containing protein 2-like [Cucumis melo]	[more]
gi\|778706333\|ref\|XP_011655833.1\|	9.2e-234	89.66	PREDICTED: R3H domain-containing protein 2-like [Cucumis sativus]	[more]
gi\|700197016\|gb\|KGN52193.1\|	1.1e-191	91.98	hypothetical protein Csa_5G615180 [Cucumis sativus]	[more]
gi\|1009119449\|ref\|XP_015876388.1\|	4.1e-173	69.28	PREDICTED: uncharacterized protein LOC107413048 [Ziziphus jujuba]	[more]
gi\|359486966\|ref\|XP_002265099.2\|	2.5e-170	70.02	PREDICTED: cAMP-regulated phosphoprotein 21 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001374	R3H_dom
IPR024771	SUZ

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G015010.1	CmoCh04G015010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001374	R3H domain	GENE3D	G3DSA:3.30.1370.50		coord: 98..167 score: 1.7
IPR001374	R3H domain	PFAM	PF01424	R3H	coord: 98..145 score: 2.1
IPR001374	R3H domain	SMART	SM00393	R3H_4	coord: 79..163 score: 1.
IPR001374	R3H domain	PROFILE	PS51061	R3H	coord: 95..164 score: 11
IPR001374	R3H domain	unknown	SSF82708	R3H domain	coord: 74..197 score: 3.53
IPR024771	SUZ domain	PFAM	PF12752	SUZ	coord: 188..235 score: 4.1
IPR024771	SUZ domain	PROFILE	PS51673	SUZ	coord: 167..238 score: 12
None	No IPR available	PANTHER	PTHR15672	CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN	coord: 11..473 score: 8.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G015010	Cucsa.282540	Cucumber (Gy14) v1	cgycmoB0793
CmoCh04G015010	CmaCh18G009410	Cucurbita maxima (Rimu)	cmacmoB420
CmoCh04G015010	CmaCh04G014260	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G015010	Lsi04G001450	Bottle gourd (USVL1VR-Ls)	cmolsiB660
CmoCh04G015010	Cp4.1LG01g14360	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G015010	Cp4.1LG09g03760	Cucurbita pepo (Zucchini)	cmocpeB651
CmoCh04G015010	CsaV3_5G035530	Cucumber (Chinese Long) v3	cmocucB0874
CmoCh04G015010	Bhi07G000643	Wax gourd	cmowgoB0904
CmoCh04G015010	Carg01910	Silver-seed gourd	carcmoB1138
CmoCh04G015010	Carg18985	Silver-seed gourd	carcmoB1412

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G015010	CmoCh18G009450	Cucurbita moschata (Rifu)	cmocmoB336

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G015010	Cucurbita maxima (Rimu)	cmacmoB739
CmoCh04G015010	Wild cucumber (PI 183967)	cmocpiB745
CmoCh04G015010	Cucumber (Chinese Long) v2	cmocuB738
CmoCh04G015010	Melon (DHL92) v3.5.1	cmomeB631
CmoCh04G015010	Watermelon (Charleston Gray)	cmowcgB654
CmoCh04G015010	Watermelon (Charleston Gray)	cmowcgB681
CmoCh04G015010	Watermelon (97103) v1	cmowmB662
CmoCh04G015010	Watermelon (97103) v1	cmowmB693
CmoCh04G015010	Cucurbita pepo (Zucchini)	cmocpeB687
CmoCh04G015010	Bottle gourd (USVL1VR-Ls)	cmolsiB700
CmoCh04G015010	Cucumber (Gy14) v2	cgybcmoB650
CmoCh04G015010	Melon (DHL92) v3.6.1	cmomedB720
CmoCh04G015010	Watermelon (97103) v2	cmowmbB729
CmoCh04G015010	Cucurbita moschata (Rifu)	cmocmoB468
CmoCh04G015010	Cucumber (Gy14) v1	cgycmoB0848