CmaCh18G009410 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G009410
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionSingle-stranded nucleic acid-binding protein R3H
LocationCma_Chr18 : 8068033 .. 8072601 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTACACACGCAAACCAAGAGACGCGAGAGAGGATATCGTGCGCGTCGCAGCCACGCAAACCTTTGACACGGTCTCAAACCATTCAACTTTCTTGATCGATCATTCCCGTCGCCAAATTCTCTCTAGACTCTTCTGATTTTCGTCTTCCGTCATCCGTCACGGCGGTCGAAAGTCGAAACCCTAATCCCTAAATGCAATTCCGATCCCTAAATTCGTCTGCTACCTCGATCTCCTCATTGGGGGCGTTTACTCTCTGATCTTTGATGTCTCGCTTCGTGCCAGGATTTTAGAGTTCTCGTCCTTCGTCTCGCCATGGACGGCTCTGCGGTTGAGGATCTCGGAGCACCGGAGTCATGGGAGGTCGCCGATTTGGACGAGGCTATGAGCCGATTGATGCTCCCTTCTTCGTCTCCTTTGAAGAATTCCAAATCATTGGACCACTCCGTTGCCGATGCTGCTCTTGGTTCTCATTCTTCTTCCGCTTCGTTTCCGTCCCCTTCCGCGTCGACATCTTCTACTCCCGATAGGGCTTCCGAAGATGTTATCAACCAGGTTGATCAGTTCCTTCGCGAGGCTTTGCATAACCCTAGGGAGCGCCTATCAAGTAAGTCGTTTATTTAGCCTTCCTGTATTATGGATGGTGTGATTGGGTTCATGAGTTCTCTAATCCATATTTGGTACGTGGGAGATAATATAAAGTGGCTGGCCATGGCCCCCTCGAAGCTGGGCCGTAAGTAAGCGAATTTTAAAATGGAGAGCGATATTGTTTACTTTCTATTTTTGAGAATAAGATATACCCTTTATCTAAGCTGAAAATTCACAATCATAACTTCATACTTGAAAGAAAAAAGAAACCTCCAAGTTGGATTAACTGCATTAGAAGTATCATTACTAAAAAAACTATGTAGTGAATTTGGATAAGCGGCGTGACATTGGTTGAGAATTATATCATTAAACTAAGTGCTACAGTTTTAATCAATTCCAAGATAAAGGTTTGCAATGGTGGCTAAAAAATCTTGGGAAGATGTATTGTCCAATCTATGTAGGTTGGTGGAATCGAAGAAACAACTGATGAAAGAGTTGTAGGACTAAGTACAGGGCTGGAACATTAATAGAAGAAGGAATTTAAAAGATGGAGAAGAAAGGGAGTATTTGTTGCTATTGGATGTTTCGAATACTCGAGAGCTAAAAGTGGATCCAGATAGAAGAATTTGTGATTTGAATTCTTTTGGACAGTTCTCAGTTTAATTGATAGTAAGTTTCTTGACATGTTTAGATGAAGTTTTCGAGATGGAAGCATGTTAGGCTGTTAGGAAAGGATGGTGTCTAGAACAATCGAAAGTGTTCTTATTGTAAGCTAGTTTATGAAGTTTGAATACAATGCAAAGAGAGAAAAAAAAAGGTCCATATTTTGGTGCTGGTCTCTGTTATAAATTATATGAAGTCATTCACCACTTGTTATTTTGATTTATTTATCTTATTTGTTTTTATGCTTCTATGTTAGATTTTAAAAAAGAATTTGATGCTATACTTGTTGGACTTCATTGGGTGTTCTCAAAGAAGCATAGACATTTTAGTTTGGCTAATCGGTCAATGCCATGGGTGGCCAACCCCTAAAGCCCCCTTTTTAGGTTAGCTCCTGAAGGGGGTTGGCCAAAAACCATTTGGCAAGTGAAAGGGTTAGCATGGAATGAATAATGTTTCACGCTTGTCGGAATCAAGTAATTTAGTGTCCTGACCATCTATAGCAAGAGGATGTCTTTGCTTCAATTGAGATGAAATTTTCAGAAAGATTTGTTCTTCCAATATCTATGGATTGGGGATTGGGATTGGAGATTAGGACAGTTTTGGTTTCTAGAATGTAGTAAGGTCAAACAGTTGCCTTGTGAGAAGGAAACTTTTAGATATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTGTGAAGTCTTCAAAGGAGAAGTTTAGGTTCTTTGAAATTATTTCGCATAGGAAATATGACAAAATATGAAGATAGAAAGAAATAATTTGATTTTTGGTGTTAGAAACCACTTACGATGAAGAAAAGGGTTAGCATTGATGGGAAAATGGTTTAGAGCCACATACAGAACTAAGTATTATAGTTGTCAGAAAATCTATGGTGAGGTGGATGCTTCATTGAACTGGAAGTCTCTTGCTTGCTTCCAGCCTGGAGGTTTTGTCAGAAAATATCGAGGAATTGTTTTGTGGGCACAGTTTCTGGAGGAAAGGCACAAGATTTCGTAGCTTAATTCCATTGAAACTTTCATACAGGGAGAATAGGGATAGAAAGAAATAGGGGGCTATTTAAAGTATAGTTGTATGGGTTGGGGAGAGGTTCTAGATTTAGATAAATTTCATGCCTTTGTTGGTCTTCACATTTTGATGCCTTATGTAATTGTACTTAGTCTTTATAAAATCAAAGTGGAGTAGGGTTTGTTAATACTATATGGATACGAGTGGACATAAATAGAGTTATAGCTTTTCACCTTAGCTGGGGAAATTGTTTCTCTTAAAAAACCATCACCATGTAAAAGCATAATCAGGAATCAAATTTCTTGTAATCTGGAAGTTTGTTGCTTACTTCAAAGCATTTTTTTTTCCTGTTGGACGCTGAAATTTCTTTAGACAAATGAAAATTGAGACAATCTAAGGGTAGAAAGCACTCTACAAAGGTGCCGACAAACTCATTTCCTCGTCTACTTGAATTCTGACTCGTACTCCTGTGGCTTATTTGCTGTGCTTCATTTATTTTGTTGAAATATGGTATTAATGAGCTTTTCCCTCTATTGATGATATTGTATACTTTCATTGCTTTAGTTTTGCGCATGGAGCAAGATGTTGAGAAATTTATCTGTGATCCTGCTCGACAACAACTAGAGTTTCAGCAGTTGCCTACGTCATATTTACGGTTAGCTGCCCATCGGGTAGCCCAACATTATTCATTGCAGTCCATGGTTCTACTGGACAACAGTTTACCTGATGGGTCTGGTTCCAAAATTATTGTTCGCAAGACTTCTGAATGCCGTCTTCCAGCTATCCGACTTGCAGATATTCCTGTTAATCTACCCACTGAAGAAAATAATACCATGAAGGTTGCTATCAAACAGAGGCCACAGAAACGGTCCCAAGTAGCCAGAGATGCAAGTTCAAATTCATCAAAATCAGGGGGTTCTAAAAGTGTGGAAGAAAGGAAGGAGGAGTATAATAAAGCTCGTGCTCGAATATTTAACTCCGGCAGCAATTCAGGTAGTAATGCTGGTGGGAAAGTAGATGCTGATCCTAGGCTGCAGGATAGTTTTCGTGGTTCCTTGGGTGCTGCAAAGGTTGAGGAGAAGATGATTTCTGGAGTTCCTGATACAAATTTTAGTAGGGGTTTGATTGACTGTTCTACGAGTAGCAGTAGAATAAGTAGAAGTAGGACTGACAAGGAGCTGCCTAGTAGGCAGCACAAACCAAATAGTAGAGTAGCCATTTTTAGAGATCGTGAGATTGACAGCAAGGACCCCGATTATGACAGGAACTACGATAGGTATGAAATGCATCCATTATTCTCTTGGCTTTATCCTATATATATATATATTTCAAATCATAAGGTAATTTCTAATCATAAAGTTAATGCTAGATGAATGAAATAAAGAGGGCGTTTTAATTGACGAGTGTCGATTTCATATTTATAAAATTTTCCATTTGGGATGCATCATGAATTTTCTTGATGGGATAGCAGTTTAGCCAAATGTCTGGTTGTAAATTCTTCTTCAGGTATATGCAGAGATTTGACCCTGGGTTCAGCTTCAGTGGTGGGCCGTACACTGTGCAGCCCATGTACGCTCCTGCAGTAAACTACAACACTGAATTTCCCCAACTTGGCTCTGCTCCTAGACAGGCTGTTTCGGAATGTCAGCCTAGACCACTCCCTCCACATGTATCTGGGCCATGGAATGCCCAATCATCTCCTGCAGGATTGGGGTACGGTCATCGAGAAGCAATGATTAGACCTTTTAATCCAAATGTTGATGCACATTCGTCTTCTGGTGTGTACCTGCATTCCTCTCAGTATCCCTGTCAGCAGTCTGGAATGCATTTTATCCATCCGCACGAACAAGCTCATCAACCCTTTTCACTGGTTTGTGCTTGCGAACTGTTTTATCGAATCTGATTTTTCATGAAACAAGCCTTTTATGCCAAGCTGTGCAAGTCCTTCCCTTCCTTGGATGTTTGTGCTGGTGATATTTTATTGAGTAGCTTTGACACTATCCTACTTAATGGAAGTATCTACTGAATGGCAAGCGTTTCCTTTTGTTCGAATGATTTTTATTATTGTCCTTGTATGATTTAGATTGCTACCTTTCTTCTGGCTACTTAAAGACAATGTACCAGAGTGGGTTTCTTTTTCATTCACACACTGTTGACCCAGATCTTATGGTTTTGCAGCAATACCAACAGCAACCAGATGCAAGTTTTGGATTAGCGCGGCCCCGGTAA

mRNA sequence

CTTACACACGCAAACCAAGAGACGCGAGAGAGGATATCGTGCGCGTCGCAGCCACGCAAACCTTTGACACGGTCTCAAACCATTCAACTTTCTTGATCGATCATTCCCGTCGCCAAATTCTCTCTAGACTCTTCTGATTTTCGTCTTCCGTCATCCGTCACGGCGGTCGAAAGTCGAAACCCTAATCCCTAAATGCAATTCCGATCCCTAAATTCGTCTGCTACCTCGATCTCCTCATTGGGGGCGTTTACTCTCTGATCTTTGATGTCTCGCTTCGTGCCAGGATTTTAGAGTTCTCGTCCTTCGTCTCGCCATGGACGGCTCTGCGGTTGAGGATCTCGGAGCACCGGAGTCATGGGAGGTCGCCGATTTGGACGAGGCTATGAGCCGATTGATGCTCCCTTCTTCGTCTCCTTTGAAGAATTCCAAATCATTGGACCACTCCGTTGCCGATGCTGCTCTTGGTTCTCATTCTTCTTCCGCTTCGTTTCCGTCCCCTTCCGCGTCGACATCTTCTACTCCCGATAGGGCTTCCGAAGATGTTATCAACCAGGTTGATCAGTTCCTTCGCGAGGCTTTGCATAACCCTAGGGAGCGCCTATCAATTTTGCGCATGGAGCAAGATGTTGAGAAATTTATCTGTGATCCTGCTCGACAACAACTAGAGTTTCAGCAGTTGCCTACGTCATATTTACGGTTAGCTGCCCATCGGGTAGCCCAACATTATTCATTGCAGTCCATGGTTCTACTGGACAACAGTTTACCTGATGGGTCTGGTTCCAAAATTATTGTTCGCAAGACTTCTGAATGCCGTCTTCCAGCTATCCGACTTGCAGATATTCCTGTTAATCTACCCACTGAAGAAAATAATACCATGAAGGTTGCTATCAAACAGAGGCCACAGAAACGGTCCCAAGTAGCCAGAGATGCAAGTTCAAATTCATCAAAATCAGGGGGTTCTAAAAGTGTGGAAGAAAGGAAGGAGGAGTATAATAAAGCTCGTGCTCGAATATTTAACTCCGGCAGCAATTCAGGTAGTAATGCTGGTGGGAAAGTAGATGCTGATCCTAGGCTGCAGGATAGTTTTCGTGGTTCCTTGGGTGCTGCAAAGGTTGAGGAGAAGATGATTTCTGGAGTTCCTGATACAAATTTTAGTAGGGGTTTGATTGACTGTTCTACGAGTAGCAGTAGAATAAGTAGAAGTAGGACTGACAAGGAGCTGCCTAGTAGGCAGCACAAACCAAATAGTAGAGTAGCCATTTTTAGAGATCGTGAGATTGACAGCAAGGACCCCGATTATGACAGGAACTACGATAGGTATATGCAGAGATTTGACCCTGGGTTCAGCTTCAGTGGTGGGCCGTACACTGTGCAGCCCATGTACGCTCCTGCAGTAAACTACAACACTGAATTTCCCCAACTTGGCTCTGCTCCTAGACAGGCTGTTTCGGAATGTCAGCCTAGACCACTCCCTCCACATGTATCTGGGCCATGGAATGCCCAATCATCTCCTGCAGGATTGGGGTACGGTCATCGAGAAGCAATGATTAGACCTTTTAATCCAAATGTTGATGCACATTCGTCTTCTGGTGTGTACCTGCATTCCTCTCAGTATCCCTGTCAGCAGTCTGGAATGCATTTTATCCATCCGCACGAACAAGCTCATCAACCCTTTTCACTGCAATACCAACAGCAACCAGATGCAAGTTTTGGATTAGCGCGGCCCCGGTAA

Coding sequence (CDS)

ATGGACGGCTCTGCGGTTGAGGATCTCGGAGCACCGGAGTCATGGGAGGTCGCCGATTTGGACGAGGCTATGAGCCGATTGATGCTCCCTTCTTCGTCTCCTTTGAAGAATTCCAAATCATTGGACCACTCCGTTGCCGATGCTGCTCTTGGTTCTCATTCTTCTTCCGCTTCGTTTCCGTCCCCTTCCGCGTCGACATCTTCTACTCCCGATAGGGCTTCCGAAGATGTTATCAACCAGGTTGATCAGTTCCTTCGCGAGGCTTTGCATAACCCTAGGGAGCGCCTATCAATTTTGCGCATGGAGCAAGATGTTGAGAAATTTATCTGTGATCCTGCTCGACAACAACTAGAGTTTCAGCAGTTGCCTACGTCATATTTACGGTTAGCTGCCCATCGGGTAGCCCAACATTATTCATTGCAGTCCATGGTTCTACTGGACAACAGTTTACCTGATGGGTCTGGTTCCAAAATTATTGTTCGCAAGACTTCTGAATGCCGTCTTCCAGCTATCCGACTTGCAGATATTCCTGTTAATCTACCCACTGAAGAAAATAATACCATGAAGGTTGCTATCAAACAGAGGCCACAGAAACGGTCCCAAGTAGCCAGAGATGCAAGTTCAAATTCATCAAAATCAGGGGGTTCTAAAAGTGTGGAAGAAAGGAAGGAGGAGTATAATAAAGCTCGTGCTCGAATATTTAACTCCGGCAGCAATTCAGGTAGTAATGCTGGTGGGAAAGTAGATGCTGATCCTAGGCTGCAGGATAGTTTTCGTGGTTCCTTGGGTGCTGCAAAGGTTGAGGAGAAGATGATTTCTGGAGTTCCTGATACAAATTTTAGTAGGGGTTTGATTGACTGTTCTACGAGTAGCAGTAGAATAAGTAGAAGTAGGACTGACAAGGAGCTGCCTAGTAGGCAGCACAAACCAAATAGTAGAGTAGCCATTTTTAGAGATCGTGAGATTGACAGCAAGGACCCCGATTATGACAGGAACTACGATAGGTATATGCAGAGATTTGACCCTGGGTTCAGCTTCAGTGGTGGGCCGTACACTGTGCAGCCCATGTACGCTCCTGCAGTAAACTACAACACTGAATTTCCCCAACTTGGCTCTGCTCCTAGACAGGCTGTTTCGGAATGTCAGCCTAGACCACTCCCTCCACATGTATCTGGGCCATGGAATGCCCAATCATCTCCTGCAGGATTGGGGTACGGTCATCGAGAAGCAATGATTAGACCTTTTAATCCAAATGTTGATGCACATTCGTCTTCTGGTGTGTACCTGCATTCCTCTCAGTATCCCTGTCAGCAGTCTGGAATGCATTTTATCCATCCGCACGAACAAGCTCATCAACCCTTTTCACTGCAATACCAACAGCAACCAGATGCAAGTTTTGGATTAGCGCGGCCCCGGTAA

Protein sequence

MDGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFPSPSASTSSTPDRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNLPTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSGSNSGSNAGGKVDADPRLQDSFRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTDKELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPMYAPAVNYNTEFPQLGSAPRQAVSECQPRPLPPHVSGPWNAQSSPAGLGYGHREAMIRPFNPNVDAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQQQPDASFGLARPR
Homology
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BLAST of CmaCh18G009410 vs. Swiss-Prot
Match: R3HD2_BOVIN (R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-09
Identity = 53/160 (33.12%), Postives = 84/160 (52.50%), Query Frame = 1 

Query: 91  NPRERLSILRMEQDVEKFICDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSL 150
           NPR+R+ +L++EQ++  FI D   Q  +F Q+ TSY R+  HRVA ++ +   V      
Sbjct: 165 NPRDRMMLLKLEQEILDFINDNNNQFKKFPQM-TSYHRMLLHRVAAYFGMDHNV------ 224

Query: 151 PDGSGSKIIVRKTSECRLPAIRLADIPVNLPTEENNTMKVAIKQRPQKRSQVARDASSNS 210
            D +G  +I+ KTS  R+P  R ++   ++  E+N   +   ++   KR   + D   N 
Sbjct: 225 -DQTGKAVIINKTSNTRIPEQRFSE---HIKDEKNTEFQ---QRFILKRDDASMDRDDNQ 284

Query: 211 SK-----SGGSKSVEERKEEYNKARARIF--NSGSNSGSN 244
            +        SKS+EER+EEY + R RIF   +G N   N
Sbjct: 285 IRVPLQDGRRSKSIEEREEEYQRVRERIFARETGQNGYLN 310

[Close]
BLAST of CmaCh18G009410 vs. Swiss-Prot
Match: ARP21_MOUSE (cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-09
Identity = 50/151 (33.11%), Postives = 78/151 (51.66%), Query Frame = 1 

Query: 90  HNPRERLSILRMEQDVEKFICDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNS 149
           +N R+R+ +L+MEQ++  FI D      +F Q+ +SY R+  HRVA ++ L   V     
Sbjct: 158 NNSRDRMILLKMEQEMIDFIADSNNHYKKFPQM-SSYQRMLVHRVAAYFGLDHNV----- 217

Query: 150 LPDGSGSKIIVRKTSECRLPAIRLADIPVNLPTEENNTMKVAIKQRPQKRSQVARDASSN 209
             D +G  +I+ KTS  R+P  R  +   +  +EE+       K+   KR   + D   N
Sbjct: 218 --DQTGKSVIINKTSSTRIPEQRFCEHLKDEKSEESQ------KRFILKRDNSSIDKEDN 277

Query: 210 SSK------SGGSKSVEERKEEYNKARARIF 235
            ++         SKS+EER+EEY + R RIF
Sbjct: 278 QNRMHPFRDDRRSKSIEEREEEYQRVRERIF 294

[Close]
BLAST of CmaCh18G009410 vs. Swiss-Prot
Match: ARP21_HUMAN (cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.8e-09
Identity = 55/165 (33.33%), Postives = 82/165 (49.70%), Query Frame = 1 

Query: 83  QFLREAL-HNPRERLSILRMEQDVEKFICDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQ 142
           +FL   L +N R+R+ +L+MEQ++  FI D      +F Q+ +SY R+  HRVA ++ L 
Sbjct: 151 EFLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQM-SSYQRMLVHRVAAYFGLD 210

Query: 143 SMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNLPTEENNTMKVAIKQRPQKRSQ 202
             V       D +G  +I+ KTS  R+P  R  +   +L  E+         +  QKR  
Sbjct: 211 HNV-------DQTGKSVIINKTSSTRIPEQRFCE---HLKDEKG--------EESQKRFI 270

Query: 203 VARDASSNSSKSGG------------SKSVEERKEEYNKARARIF 235
           + RD SS   +               SKS+EER+EEY + R RIF
Sbjct: 271 LKRDNSSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIF 296

[Close]
BLAST of CmaCh18G009410 vs. Swiss-Prot
Match: R3HD2_MOUSE (R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 6.9e-09
Identity = 76/263 (28.90%), Postives = 121/263 (46.01%), Query Frame = 1 

Query: 55  SSASFPSPSASTSSTPDRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPAR 114
           S    P    S  S+ +      I+  +  +     NPR+R+ +L++EQ++  FI D   
Sbjct: 129 SKEKVPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILDFINDNNN 188

Query: 115 QQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLA 174
           Q  +F Q+ TSY R+  HRVA ++ +   V       D +G  +I+ KTS  R+P  R +
Sbjct: 189 QFKKFPQM-TSYHRMLLHRVAAYFGMDHNV-------DQTGKAVIINKTSSTRIPEQRFS 248

Query: 175 DIPVNLPTEENNTMKVAIKQRPQKRSQVARDASSNSSK-----SGGSKSVEERKEEYNKA 234
           +   ++  E+N   +   ++   KR   + D   N  +        SKS+EER+EEY + 
Sbjct: 249 E---HIKDEKNTEFQ---QRFILKRDDASMDRDDNQMRVPLQDGRRSKSIEEREEEYQRV 308

Query: 235 RARIF--NSGSNSGSNAGGKVDADPRLQDSFRGSLGAAKVEEKMISGVPDTNFSRGLIDC 294
           R RIF   +G N   N       D RL    + +  ++  + + I        SR     
Sbjct: 309 RERIFARETGQNGYLN-------DIRLS---KEAFSSSSHKRRQIFRGNREGLSR----- 359

Query: 295 STSSSRISRSRTDKELPSRQHKP 311
            TSSSR  +S TD EL S + +P
Sbjct: 369 -TSSSR--QSSTDSELKSLEPRP 359

[Close]
BLAST of CmaCh18G009410 vs. Swiss-Prot
Match: R3HD1_HUMAN (R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3)

HSP 1 Score: 57.8 bits (138), Expect = 3.8e-07
Identity = 82/314 (26.11%), Postives = 132/314 (42.04%), Query Frame = 1 

Query: 7   EDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFPSPSAST 66
           E+   P + E++  ++   ++ L  S   +   S D +  + A      S   P    S 
Sbjct: 86  EESPPPPAPEISQENQEKIQIQLTQSFEKEEKPSKDEAEKEKA------SDKLPRKMLSR 145

Query: 67  SSTPDRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQQLPTSY 126
            S+ +      I+  +  +    +NPR+R+ +L++EQ++  FI +    + +F  + TSY
Sbjct: 146 DSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPM-TSY 205

Query: 127 LRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNLPTEENN 186
            R+  HRVA ++ L   V       D SG  +IV KTS  R+P  +            N 
Sbjct: 206 HRMLLHRVAAYFGLDHNV-------DQSGKSVIVNKTSNTRIPDQKF-----------NE 265

Query: 187 TMKVAIKQRPQKRSQVARDASSNSSKSGG----------SKSVEERKEEYNKARARIFNS 246
            +K    +  QKR  + RD SS                 SKS+EER+EEY +AR RIF+ 
Sbjct: 266 HIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQ 325

Query: 247 GSNSGSNAGGKVDADPRLQDSFRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISR 306
            S            D RLQD       A+  +++           R   D S  S+   +
Sbjct: 326 DSLCSQE---NYIIDKRLQDE-----DASSTQQR-------RQIFRVNKDASGRSTNSHQ 359

Query: 307 SRTDKELPSRQHKP 311
           S T+ EL   + +P
Sbjct: 386 SSTENELKYSEPRP 359

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BLAST of CmaCh18G009410 vs. TrEMBL
Match: A0A0A0KRF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G615180 PE=4 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 1.4e-189
Identity = 342/373 (91.69%), Postives = 353/373 (94.64%), Query Frame = 1 

Query: 101 MEQDVEKFICDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV 160
           MEQDVEKFI DPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV
Sbjct: 1   MEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV 60

Query: 161 RKTSECRLPAIRLADIPVNLPTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVE 220
           RKTSECRLP IRLADIPVNLP EEN++MKVAIKQRPQKRSQ+ARD ++NSSKS GSKSVE
Sbjct: 61  RKTSECRLPTIRLADIPVNLPAEENSSMKVAIKQRPQKRSQLARDGNANSSKSSGSKSVE 120

Query: 221 ERKEEYNKARARIFNSGSNSGSNAGGKVDADPRLQDSFRGSLGAAKVEEKMISGVPDTNF 280
           ERKEEYNKARARIFNS SNSGS+AGGKVD DPR QD++RGSL AAKVEEKMI GVPDTNF
Sbjct: 121 ERKEEYNKARARIFNSSSNSGSHAGGKVDTDPRPQDNYRGSLSAAKVEEKMIPGVPDTNF 180

Query: 281 SRGLIDCSTSSSRISRSRTDKELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRF 340
           SRGLIDCSTSSSRISRSRTDKELPSRQ+KPNSRVAIFRDREIDSKDPDYDR+YDRYMQRF
Sbjct: 181 SRGLIDCSTSSSRISRSRTDKELPSRQYKPNSRVAIFRDREIDSKDPDYDRSYDRYMQRF 240

Query: 341 DPGFSFSGGPYTVQPMYAPAVNYNTEFPQLGSAPRQAVSECQPRPL-PPHVSGPWNAQSS 400
           DPGF FSGGPY VQPMYAPAVNYNTEFPQLGSA RQAVSECQ RPL PPHV GPWN QSS
Sbjct: 241 DPGFGFSGGPYPVQPMYAPAVNYNTEFPQLGSAHRQAVSECQQRPLPPPHVPGPWNTQSS 300

Query: 401 PAGLGYGHREAMIRPFNPNVDAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQ 460
           PAGLGYGHREAMIRPFNPNVDAHSSSGVYLHSSQYP QQ+GMHFIHPHEQ HQPFS QYQ
Sbjct: 301 PAGLGYGHREAMIRPFNPNVDAHSSSGVYLHSSQYPGQQTGMHFIHPHEQTHQPFSQQYQ 360

Query: 461 QQPDASFGLARPR 473
           QQPDASFGLARPR
Sbjct: 361 QQPDASFGLARPR 373

[Close]
BLAST of CmaCh18G009410 vs. TrEMBL
Match: F6HVQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0106g00640 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.5e-172
Identity = 338/478 (70.71%), Postives = 389/478 (81.38%), Query Frame = 1 

Query: 1   MDGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFP 60
           M+GSA +DLGAPESWEVADLDE+MSRLML SSS  K+S S   S  DA++    +SAS  
Sbjct: 1   MEGSA-DDLGAPESWEVADLDESMSRLMLSSSSSKKDSSS--SSSLDASV---PASASAS 60

Query: 61  SPSASTSSTP---DRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQL 120
           +P+ S+SS P      SED +NQVDQFLREAL NPRERLSILRMEQD+EKFI DP +QQL
Sbjct: 61  APALSSSSVPVGSGMISEDSVNQVDQFLREALQNPRERLSILRMEQDIEKFIHDPTQQQL 120

Query: 121 EFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIP 180
           EFQQLPTSYLRLAAHRVAQHYSLQSMVLLDN+LPDGSGSKIIVRKTSECRLP IRLADIP
Sbjct: 121 EFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNNLPDGSGSKIIVRKTSECRLPLIRLADIP 180

Query: 181 VNLPTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSG 240
           V+LP E+   +KVAIKQRPQKRSQ    A+S+S K+  SKSVEERKEEYN+ARARIFNS 
Sbjct: 181 VSLPPEDGGVIKVAIKQRPQKRSQNVSCANSHSFKANNSKSVEERKEEYNRARARIFNSS 240

Query: 241 SNSGSNAGGKVDADPRLQDSFR-GSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISR 300
           S SG+  GGK + +PR+QD+F+ GS+   K+EEK ++G  D N  RGL+D STSS+R +R
Sbjct: 241 SFSGT-GGGKPECEPRMQDTFQHGSVSLPKMEEKPVAGSSDVNICRGLVDSSTSSNRSAR 300

Query: 301 SRTDKELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPM 360
           SR +KE P  ++KPN+RVAIFRDREID KDPDYDR+YDRY+QRFDPGF F+GGPYT+QPM
Sbjct: 301 SRAEKE-PIGRYKPNNRVAIFRDREIDRKDPDYDRSYDRYLQRFDPGFGFNGGPYTIQPM 360

Query: 361 YAPAVNYNTEFPQLGSAPRQAVS-ECQPRPLPPHVSGPWNAQSSPAGLGYGHREAMIRPF 420
           Y PAVNYNTEFPQLGSA R  +S E QPRPLP H+SGPW A S+P G+GYGH E M+ PF
Sbjct: 361 YTPAVNYNTEFPQLGSAHRPQISTEHQPRPLPQHLSGPWPAPSTPTGIGYGHPETMMSPF 420

Query: 421 NPN-VDAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQQQPDASFGLARPR 473
           NPN V A S+S +YL SSQYPCQ+ GM FIHPHE  HQPFS  +QQQPD SFGLARPR
Sbjct: 421 NPNHVGARSTSTLYLPSSQYPCQRPGMPFIHPHEHVHQPFSQSHQQQPDTSFGLARPR 470

[Close]
BLAST of CmaCh18G009410 vs. TrEMBL
Match: A0A067KI62_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10418 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 1.6e-169
Identity = 332/476 (69.75%), Postives = 381/476 (80.04%), Query Frame = 1 

Query: 1   MDGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFP 60
           M+GS VEDLGAPESWEVADLDE MSRLML  S       S + S+ D+    +S S    
Sbjct: 1   MEGSVVEDLGAPESWEVADLDETMSRLMLKDSKRDCKQSSQELSI-DSPTSVNSGSVLGS 60

Query: 61  SPSASTSSTPDR-ASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEF 120
             SAS + T D+  SED+INQVDQFLREAL NPRERLSILRMEQDVEKFICDP +QQLEF
Sbjct: 61  GSSASGTGTGDKVVSEDLINQVDQFLREALQNPRERLSILRMEQDVEKFICDPTQQQLEF 120

Query: 121 QQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVN 180
           QQLPTSYLRLAAHRVAQHYSL SMVLLDN+LPDGSGS+IIVRKTSECRLP++RLADIPVN
Sbjct: 121 QQLPTSYLRLAAHRVAQHYSLPSMVLLDNNLPDGSGSRIIVRKTSECRLPSVRLADIPVN 180

Query: 181 LPTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSGSN 240
           LP+E+++ +KVAIKQRPQKR Q   +++S+S K+  SKSVEERKEEYN+ARARIFNS S 
Sbjct: 181 LPSEDSSVVKVAIKQRPQKRPQTVNNSNSSSLKTNNSKSVEERKEEYNRARARIFNS-SG 240

Query: 241 SGSNAGGKVDADPRLQD-SFRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSR 300
             S A GK + +PRLQD S  G LG  K EEK +SG  D N SRG I+ S SS+R +R+R
Sbjct: 241 FSSGASGKPEGEPRLQDGSQHGLLGIFKTEEKPVSGNLDINSSRGSIESSISSNRSTRTR 300

Query: 301 TDKELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPMYA 360
            +KE P  ++KPN+RVAIFRDREID KDPDYDR+YDRYMQRFDPGF F+GGPYT+QPMY 
Sbjct: 301 IEKE-PISRYKPNNRVAIFRDREIDRKDPDYDRSYDRYMQRFDPGFGFNGGPYTLQPMYT 360

Query: 361 PAVNYNTEFPQLGSAPRQAVS-ECQPRPLPPHVSGPWNAQSSPAGLGYGHREAMIRPFNP 420
           PA+NYNTEFPQLGS+ R  +S E QPRPLP H+ GPW A S+PAG+GYGH E M+ PFNP
Sbjct: 361 PALNYNTEFPQLGSSHRPQISTEHQPRPLPQHLHGPWAAPSNPAGIGYGHPETMLPPFNP 420

Query: 421 N-VDAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQQQPDASFGLARPR 473
           N V A S+S +YLHSSQYPCQ+ GM FIHPHE   QPFS  +QQQPDASFGLARPR
Sbjct: 421 NHVGARSTSAIYLHSSQYPCQRPGMPFIHPHEHV-QPFSQSHQQQPDASFGLARPR 472

[Close]
BLAST of CmaCh18G009410 vs. TrEMBL
Match: A0A061FWE8_THECC (Single-stranded nucleic acid binding R3H protein isoform 1 OS=Theobroma cacao GN=TCM_043919 PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 2.3e-168
Identity = 329/475 (69.26%), Postives = 374/475 (78.74%), Query Frame = 1 

Query: 1   MDGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFP 60
           MDGS VEDLGAPESWEVADLD  MSRLML S+   K        + DA            
Sbjct: 1   MDGSVVEDLGAPESWEVADLDATMSRLMLSSNKEPKPE------LPDAI----------- 60

Query: 61  SPSASTSSTPDRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQ 120
             S+S SS     +EDV NQVDQFLREA+ NPRERLSILRMEQDVEKFI DP +QQLEFQ
Sbjct: 61  --SSSASSAEKVIAEDVTNQVDQFLREAIQNPRERLSILRMEQDVEKFIHDPTQQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDN+LPDGSG +IIVRKTSECRLP IRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNNLPDGSGFRIIVRKTSECRLPPIRLADIPVNL 180

Query: 181 PTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSGSNS 240
           P+E+   +KVAIKQRPQKRSQV+ +++SNS K+  SKSVEERKEEYN+ARARIFNS S+S
Sbjct: 181 PSEDPGVVKVAIKQRPQKRSQVSCNSNSNSLKTNNSKSVEERKEEYNRARARIFNSNSSS 240

Query: 241 GSNAGGKVDADPRLQD-SFRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRT 300
            S +GGK + + RLQD S+ GS G  K+EEK +S V D N SRGLI+ STSSSR++RSRT
Sbjct: 241 -SGSGGKPENELRLQDVSYHGSSGMPKMEEKPVSVVSDINSSRGLIESSTSSSRLARSRT 300

Query: 301 DKELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPMYAP 360
           +KE P  + KPN+RVAIFRDRE D KDPDYDR+YDRY+QRFDPGF F+ GPYT+QPMY P
Sbjct: 301 EKE-PIGRSKPNNRVAIFRDRETDRKDPDYDRSYDRYLQRFDPGFGFNSGPYTMQPMYTP 360

Query: 361 AVNYNTEFPQLGSAPRQAVS-ECQPRPLPPHVSGPWNAQSSPAGLGYGHREAMIRPFNPN 420
           A+NYNTEFPQLG+  R  +S E QPR LP H+ GPW A S+  G+ YGH E M+ PFNPN
Sbjct: 361 AINYNTEFPQLGTTHRPQISTEHQPRALPQHIPGPWAAPSTATGISYGHPETMMPPFNPN 420

Query: 421 -VDAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQQQPDASFGLARPR 473
            V AHS+S +YLHSSQYPCQ+ GM FIHPHE  HQPFS  +QQQPDASFGLARPR
Sbjct: 421 HVGAHSTSAIYLHSSQYPCQRPGMPFIHPHEHVHQPFSQSHQQQPDASFGLARPR 454

[Close]
BLAST of CmaCh18G009410 vs. TrEMBL
Match: M5WGG5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005527mg PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 6.7e-168
Identity = 326/475 (68.63%), Postives = 377/475 (79.37%), Query Frame = 1 

Query: 1   MDGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFP 60
           M+GS VEDLGAPESWEVA LDEAM+RLML S+   K+SK  D +     +          
Sbjct: 1   MEGSVVEDLGAPESWEVAGLDEAMNRLMLSSN---KDSKPQDLNDVSPLV---------- 60

Query: 61  SPSASTSSTPDRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQ 120
              +S S   D+ SED +NQVDQFLREAL NPRERLSILRMEQDVEKFI DP +QQLEFQ
Sbjct: 61  ---SSASDASDKFSEDALNQVDQFLREALQNPRERLSILRMEQDVEKFIRDPIQQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDN+LPDGSGS+IIVRKTSECRLP IRLADIPV+L
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNNLPDGSGSRIIVRKTSECRLPQIRLADIPVSL 180

Query: 181 PTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSGSNS 240
           P+E+    KVAIKQRPQKRSQ A +A+SNS+K+  SK+VEERKEEYN+ARARIFNS  N 
Sbjct: 181 PSEDGGVTKVAIKQRPQKRSQTANNANSNSAKANSSKTVEERKEEYNRARARIFNSSINM 240

Query: 241 GSNAGGKVDADPRLQDSFRG-SLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRT 300
             ++ GK +++PR+QD+ +   L   KVE+K  S V D +  RGLI+ STSSSR +RSR 
Sbjct: 241 SGSSSGKSESEPRMQDTPQHVPLVMPKVEDK--SSVSDLHSGRGLIESSTSSSRTARSRP 300

Query: 301 DKELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPMYAP 360
           +KE P  ++KPN+RVAIFRDREID KDPDYDR+YDRYMQRFDPGF F+GGPYT+QPMY P
Sbjct: 301 EKE-PVGRYKPNNRVAIFRDREIDRKDPDYDRSYDRYMQRFDPGFGFTGGPYTIQPMYTP 360

Query: 361 AVNYNTEFPQLGSAPRQAVS-ECQPRPLPPHVSGPWNAQSSPAGLGYGHREAMIRPFNPN 420
           A+NYNTEFPQLG+A R  +S E QPRPLP H+ GPW A S PAG+GYGH E +I PFN N
Sbjct: 361 ALNYNTEFPQLGAAHRPQISTEHQPRPLPQHLPGPWVAPSVPAGIGYGHPETIITPFNAN 420

Query: 421 -VDAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQQQPDASFGLARPR 473
            V A S+SG+YLHSSQYPCQ+ GM F+HPHE  HQPFS  +QQQPDASFGLARPR
Sbjct: 421 HVGARSTSGIYLHSSQYPCQRPGMPFLHPHEHIHQPFSQSHQQQPDASFGLARPR 456

[Close]
BLAST of CmaCh18G009410 vs. TAIR10
Match: AT3G56680.1 (AT3G56680.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 177.9 bits (450), Expect = 1.4e-44
Identity = 142/386 (36.79%), Postives = 193/386 (50.00%), Query Frame = 1 

Query: 81  VDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQQLPTSYLRLAAHRVAQHYSL 140
           VD FL EALHN R RL+ILRME DV++ + +P +QQ EFQ  PTSYLRLAAHRVA HY L
Sbjct: 24  VDPFLVEALHNSRHRLTILRMELDVQRLLQNPEQQQFEFQHFPTSYLRLAAHRVANHYGL 83

Query: 141 QSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNLPTEEN--NTMKVAIKQRPQK 200
            + V    S  DG+ ++I+V KT+E + PA+RL++IPV   +E     + KV+IK RP K
Sbjct: 84  ATAV--QESGADGNENRILVTKTTESKFPAVRLSEIPVAKQSENGKFESRKVSIKTRPSK 143

Query: 201 RSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSGSNSGSNAGGKVDADPRLQDSF 260
            S     A       G  +SVEERKEEY+KAR RIF+                       
Sbjct: 144 GS--GYGAGDLEKNRGPLRSVEERKEEYDKARERIFS----------------------- 203

Query: 261 RGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTDKELPSRQHKPNSRVAIFR 320
            G  G +  +    + V + N S    D   S +  +     K L  R+  P SRVAIFR
Sbjct: 204 -GLTGLSCDDSSSETQVYERNASLSRDDKQVSKN--AYVEVKKNLSIRESGPTSRVAIFR 263

Query: 321 DREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPMYAPAVNYNTEFPQLGSAPRQAV 380
           DRE D  DPDYDR + RY++      +F+  P+ +Q +  P   Y   F      P    
Sbjct: 264 DREKDRFDPDYDRRHQRYIRSLPVNQNFNLPPFNIQQI--PTPYYEMGFTGYNQIP---- 323

Query: 381 SECQPRPLPPHVSGPWNAQSSPAGLGYG-HREAMIRPFNPNVDAHSSSGVYLHSSQYPCQ 440
                              S PA LG+G H  +++ P+   +DA     +Y+H   +P  
Sbjct: 324 -------------------SPPAPLGFGPHPSSIMSPYGTTMDA-----MYMH---WP-- 344

Query: 441 QSGMHFIHPHEQ-AHQPFSLQYQQQP 463
            + M + HP+EQ  +     Q+ QQP
Sbjct: 384 NAAMMYAHPYEQFRNGSLQAQFVQQP 344

[Close]
BLAST of CmaCh18G009410 vs. TAIR10
Match: AT3G10770.1 (AT3G10770.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 169.9 bits (429), Expect = 3.9e-42
Identity = 125/287 (43.55%), Postives = 165/287 (57.49%), Query Frame = 1 

Query: 81  VDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQQLPTSYLRLAAHRVAQHYSL 140
           VD FL EAL NPR RL+ILRME D++KF  +P + Q EF   PTSYLRLAAHRVAQHY L
Sbjct: 11  VDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVAQHYGL 70

Query: 141 QSMVLLDN--SLPDGSGSKIIVRKTSECRLPAIRLADIPVNLPTE-ENNTMKVAIKQRPQ 200
            +M  LDN     DGS ++I+V KT+E R P + L++IPV  P        K+AIK RP+
Sbjct: 71  VTMA-LDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFKIAIKPRPK 130

Query: 201 KRSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSGSNSGSNAGGKVDADPRLQDS 260
           + S      S +  +    +SVEERKEEY+KARARIFNS S+S S            +DS
Sbjct: 131 RGSGCG--GSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDS------------EDS 190

Query: 261 FRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTDKELPSRQHKPNSRVAIF 320
              SL    +E      V +T  +R   + + ++S +       +  +R     SRVAI 
Sbjct: 191 --SSLRPPSLE------VRNTCINRNETEVAVNNSPV-------DAVTRDSGRTSRVAII 250

Query: 321 RDREIDSKDPDYDRNYDRYMQRFDPGFSF-----SGGPYTVQPMYAP 360
           RDRE D  DPDYDR+YDRY+   DP + +     SG  ++  P++ P
Sbjct: 251 RDREKDRYDPDYDRSYDRYV--VDPAYRYVRVMPSGQSFSPMPIHIP 265

[Close]
BLAST of CmaCh18G009410 vs. TAIR10
Match: AT5G05100.1 (AT5G05100.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 169.1 bits (427), Expect = 6.6e-42
Identity = 135/339 (39.82%), Postives = 176/339 (51.92%), Query Frame = 1 

Query: 73  ASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQQLPTSYLRLAAH 132
           A  D    VD FL EAL NPR RL+ILRME D++KF   P +QQ EFQ LPTSYLRL AH
Sbjct: 3   AMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIAH 62

Query: 133 RVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNLPTEENNT--MKV 192
           RVAQHY L +  L    + DGSG++I+  KT E R P + L++IPV  P         K+
Sbjct: 63  RVAQHYGLFTTALEGGGV-DGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGFKI 122

Query: 193 AIKQRPQKRSQVARDASSNSSKSGGSK----SVEERKEEYNKARARIFNSGSNSGSNAGG 252
           AIK RP       R A  + S SG  K    SVEERKEEY+KARARIFNS S+S S    
Sbjct: 123 AIKPRPN------RGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSS 182

Query: 253 KVDADPRLQDSFRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTDKELPSR 312
                P             +++ K  +  P  N +  +++ +++   + R+        R
Sbjct: 183 TRAPPPPY----------PRLDSKHNTACPSRNETEVVVNYNSNPVDVERNGV-----IR 242

Query: 313 QHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPMYAPAVNYNTE 372
                SRVAI RDRE D  DPDYDRN  RY++   P  +F+       P+  P   ++  
Sbjct: 243 DSGRTSRVAIIRDREKDRYDPDYDRN--RYVRVAPPVQNFN-------PIPIPLPFHDAI 302

Query: 373 FPQLGSAPRQAVSECQPRPLPPHVSGPWNAQSSPAGLGY 406
           FPQ+   PR   S     PL P ++ P   +   A + Y
Sbjct: 303 FPQM---PRTQASLNYGHPLNPAMTAPSYTEWPSATMTY 307

[Close]
BLAST of CmaCh18G009410 vs. TAIR10
Match: AT2G40960.1 (AT2G40960.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-38
Identity = 145/402 (36.07%), Postives = 193/402 (48.01%), Query Frame = 1 

Query: 63  SASTSSTPDRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQQL 122
           +A TS +      D    VD FL EAL NPR RL+ILRME DV++F+  P +QQ EFQ  
Sbjct: 3   TALTSESGCAVIADKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHF 62

Query: 123 PTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPV-NLP 182
           PTSYLR AAHRVA HY L + V   +   DG+ S+I+V K+S+ R PA RL++IPV    
Sbjct: 63  PTSYLRFAAHRVANHYGLITSV--RDGGADGNESRIVVTKSSDSRFPAARLSEIPVKQSE 122

Query: 183 TEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSGSNSG 242
           T +   MKV IK RP K S +  D      K G  KSVEERKE+Y++ARARIFN   N  
Sbjct: 123 TGKFEHMKVVIKPRPTKGSGMEGD----ELKGGLLKSVEERKEDYDRARARIFNGLVNID 182

Query: 243 SNAGGKVDADPRLQDSFRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTDK 302
            N     + +P     +R +  +++ E +++                           DK
Sbjct: 183 CNDSSS-ETNP-----WRVNCSSSRDENQVLKN--------------------GNIEADK 242

Query: 303 ELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPMYAPAV 362
              SR+  P SR+AI RDRE D  DPDYDR+  RY+       +     + +Q M  P  
Sbjct: 243 NNISRKSNPASRIAILRDREKDRYDPDYDRSNYRYISNLPVDQNLCVAHFNIQTMGTPI- 302

Query: 363 NYNTEFPQLGSAPRQAVSECQPRPLPPHVSGPWNAQSSP---AGLGYGHREAMIRPFNPN 422
            Y+  F   G +P            PP ++   ++  SP    GL    R+A +    PN
Sbjct: 303 -YDMGF--RGYSP----------TAPPSLNLGQHSVMSPCVTTGLNQPSRDAAMYMQWPN 349

Query: 423 VDAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQQ 461
             A   +  Y H    P Q       +P     QP S  Y Q
Sbjct: 363 AAAVMYTHSYDHFRNSPFQAQ----FYP-----QPLSFDYMQ 349

[Close]
BLAST of CmaCh18G009410 vs. NCBI nr
Match: gi|659091848|ref|XP_008446764.1| (PREDICTED: R3H domain-containing protein 2-like [Cucumis melo])

HSP 1 Score: 820.5 bits (2118), Expect = 1.5e-234
Identity = 431/473 (91.12%), Postives = 444/473 (93.87%), Query Frame = 1 

Query: 1   MDGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFP 60
           M+GSAVEDLGAPESWEVADLDEAMSRLMLPSSSP KNSKSLD  VADAA   H SSASFP
Sbjct: 1   MEGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPKKNSKSLD--VADAAPAYHFSSASFP 60

Query: 61  SPSASTSSTPDRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQ 120
           S SAS SS  DR SED INQVDQFLREALHNPRERLSILRMEQDVEKFI DPARQQLEFQ
Sbjct: 61  SLSASASSALDRVSEDAINQVDQFLREALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECR PAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRHPAIRLADIPVNL 180

Query: 181 PTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSGSNS 240
           PTEEN++MKVAIKQRPQKRSQ+ARDAS+NSSK+ GSKSVEERKEEYNKARARIF+S SNS
Sbjct: 181 PTEENSSMKVAIKQRPQKRSQLARDASANSSKTSGSKSVEERKEEYNKARARIFSSSSNS 240

Query: 241 GSNAGGKVDADPRLQDSFRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTD 300
           GS+AGGKVDADPR QDS+RGSL AAKVEEKMI G+PDTNFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSHAGGKVDADPRPQDSYRGSLSAAKVEEKMIPGIPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPMYAPA 360
           KELPSRQ+KPNSRVAIFRDREIDSKDPDYDR+YDRYMQRFDPGF FSGGPY VQPMYAPA
Sbjct: 301 KELPSRQYKPNSRVAIFRDREIDSKDPDYDRSYDRYMQRFDPGFGFSGGPYPVQPMYAPA 360

Query: 361 VNYNTEFPQLGSAPRQAVSECQPRPL-PPHVSGPWNAQSSPAGLGYGHREAMIRPFNPNV 420
           VNYNTEFPQLGSA RQAVSECQPRPL PPHV GPWN QSSPAGLGYGHREAMIRPFNPNV
Sbjct: 361 VNYNTEFPQLGSAHRQAVSECQPRPLPPPHVPGPWNTQSSPAGLGYGHREAMIRPFNPNV 420

Query: 421 DAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQQQPDASFGLARPR 473
           DAHSSSGVYLHSSQYP QQ+GMHFIHPHEQ HQPFS QYQQQPDASFGLARPR
Sbjct: 421 DAHSSSGVYLHSSQYPGQQTGMHFIHPHEQTHQPFSQQYQQQPDASFGLARPR 471

[Close]
BLAST of CmaCh18G009410 vs. NCBI nr
Match: gi|778706333|ref|XP_011655833.1| (PREDICTED: R3H domain-containing protein 2-like [Cucumis sativus])

HSP 1 Score: 810.4 bits (2092), Expect = 1.6e-231
Identity = 425/473 (89.85%), Postives = 438/473 (92.60%), Query Frame = 1 

Query: 1   MDGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFP 60
           M+GSAVEDLGAPESWEVADLDEAMSRLMLPSSSP KNSKSLD  VADAA   H S+ASFP
Sbjct: 1   MEGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPKKNSKSLD--VADAAAAYHFSTASFP 60

Query: 61  SPSASTSSTPDRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQ 120
           S S S  S  DR SED INQVDQFLREALHNPRERLSILRMEQDVEKFI DPARQQLEFQ
Sbjct: 61  SLSGSAYSALDRVSEDAINQVDQFLREALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLP IRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPTIRLADIPVNL 180

Query: 181 PTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSGSNS 240
           P EEN++MKVAIKQRPQKRSQ+ARD ++NSSKS GSKSVEERKEEYNKARARIFNS SNS
Sbjct: 181 PAEENSSMKVAIKQRPQKRSQLARDGNANSSKSSGSKSVEERKEEYNKARARIFNSSSNS 240

Query: 241 GSNAGGKVDADPRLQDSFRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTD 300
           GS+AGGKVD DPR QD++RGSL AAKVEEKMI GVPDTNFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSHAGGKVDTDPRPQDNYRGSLSAAKVEEKMIPGVPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPMYAPA 360
           KELPSRQ+KPNSRVAIFRDREIDSKDPDYDR+YDRYMQRFDPGF FSGGPY VQPMYAPA
Sbjct: 301 KELPSRQYKPNSRVAIFRDREIDSKDPDYDRSYDRYMQRFDPGFGFSGGPYPVQPMYAPA 360

Query: 361 VNYNTEFPQLGSAPRQAVSECQPRPL-PPHVSGPWNAQSSPAGLGYGHREAMIRPFNPNV 420
           VNYNTEFPQLGSA RQAVSECQ RPL PPHV GPWN QSSPAGLGYGHREAMIRPFNPNV
Sbjct: 361 VNYNTEFPQLGSAHRQAVSECQQRPLPPPHVPGPWNTQSSPAGLGYGHREAMIRPFNPNV 420

Query: 421 DAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQQQPDASFGLARPR 473
           DAHSSSGVYLHSSQYP QQ+GMHFIHPHEQ HQPFS QYQQQPDASFGLARPR
Sbjct: 421 DAHSSSGVYLHSSQYPGQQTGMHFIHPHEQTHQPFSQQYQQQPDASFGLARPR 471

[Close]
BLAST of CmaCh18G009410 vs. NCBI nr
Match: gi|700197016|gb|KGN52193.1| (hypothetical protein Csa_5G615180 [Cucumis sativus])

HSP 1 Score: 670.6 bits (1729), Expect = 2.0e-189
Identity = 342/373 (91.69%), Postives = 353/373 (94.64%), Query Frame = 1 

Query: 101 MEQDVEKFICDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV 160
           MEQDVEKFI DPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV
Sbjct: 1   MEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIV 60

Query: 161 RKTSECRLPAIRLADIPVNLPTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVE 220
           RKTSECRLP IRLADIPVNLP EEN++MKVAIKQRPQKRSQ+ARD ++NSSKS GSKSVE
Sbjct: 61  RKTSECRLPTIRLADIPVNLPAEENSSMKVAIKQRPQKRSQLARDGNANSSKSSGSKSVE 120

Query: 221 ERKEEYNKARARIFNSGSNSGSNAGGKVDADPRLQDSFRGSLGAAKVEEKMISGVPDTNF 280
           ERKEEYNKARARIFNS SNSGS+AGGKVD DPR QD++RGSL AAKVEEKMI GVPDTNF
Sbjct: 121 ERKEEYNKARARIFNSSSNSGSHAGGKVDTDPRPQDNYRGSLSAAKVEEKMIPGVPDTNF 180

Query: 281 SRGLIDCSTSSSRISRSRTDKELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRF 340
           SRGLIDCSTSSSRISRSRTDKELPSRQ+KPNSRVAIFRDREIDSKDPDYDR+YDRYMQRF
Sbjct: 181 SRGLIDCSTSSSRISRSRTDKELPSRQYKPNSRVAIFRDREIDSKDPDYDRSYDRYMQRF 240

Query: 341 DPGFSFSGGPYTVQPMYAPAVNYNTEFPQLGSAPRQAVSECQPRPL-PPHVSGPWNAQSS 400
           DPGF FSGGPY VQPMYAPAVNYNTEFPQLGSA RQAVSECQ RPL PPHV GPWN QSS
Sbjct: 241 DPGFGFSGGPYPVQPMYAPAVNYNTEFPQLGSAHRQAVSECQQRPLPPPHVPGPWNTQSS 300

Query: 401 PAGLGYGHREAMIRPFNPNVDAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQ 460
           PAGLGYGHREAMIRPFNPNVDAHSSSGVYLHSSQYP QQ+GMHFIHPHEQ HQPFS QYQ
Sbjct: 301 PAGLGYGHREAMIRPFNPNVDAHSSSGVYLHSSQYPGQQTGMHFIHPHEQTHQPFSQQYQ 360

Query: 461 QQPDASFGLARPR 473
           QQPDASFGLARPR
Sbjct: 361 QQPDASFGLARPR 373

[Close]
BLAST of CmaCh18G009410 vs. NCBI nr
Match: gi|359486966|ref|XP_002265099.2| (PREDICTED: cAMP-regulated phosphoprotein 21 [Vitis vinifera])

HSP 1 Score: 614.0 bits (1582), Expect = 2.2e-172
Identity = 338/478 (70.71%), Postives = 389/478 (81.38%), Query Frame = 1 

Query: 1   MDGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFP 60
           M+GSA +DLGAPESWEVADLDE+MSRLML SSS  K+S S   S  DA++    +SAS  
Sbjct: 1   MEGSA-DDLGAPESWEVADLDESMSRLMLSSSSSKKDSSS--SSSLDASV---PASASAS 60

Query: 61  SPSASTSSTP---DRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQL 120
           +P+ S+SS P      SED +NQVDQFLREAL NPRERLSILRMEQD+EKFI DP +QQL
Sbjct: 61  APALSSSSVPVGSGMISEDSVNQVDQFLREALQNPRERLSILRMEQDIEKFIHDPTQQQL 120

Query: 121 EFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIP 180
           EFQQLPTSYLRLAAHRVAQHYSLQSMVLLDN+LPDGSGSKIIVRKTSECRLP IRLADIP
Sbjct: 121 EFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNNLPDGSGSKIIVRKTSECRLPLIRLADIP 180

Query: 181 VNLPTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSG 240
           V+LP E+   +KVAIKQRPQKRSQ    A+S+S K+  SKSVEERKEEYN+ARARIFNS 
Sbjct: 181 VSLPPEDGGVIKVAIKQRPQKRSQNVSCANSHSFKANNSKSVEERKEEYNRARARIFNSS 240

Query: 241 SNSGSNAGGKVDADPRLQDSFR-GSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISR 300
           S SG+  GGK + +PR+QD+F+ GS+   K+EEK ++G  D N  RGL+D STSS+R +R
Sbjct: 241 SFSGT-GGGKPECEPRMQDTFQHGSVSLPKMEEKPVAGSSDVNICRGLVDSSTSSNRSAR 300

Query: 301 SRTDKELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPM 360
           SR +KE P  ++KPN+RVAIFRDREID KDPDYDR+YDRY+QRFDPGF F+GGPYT+QPM
Sbjct: 301 SRAEKE-PIGRYKPNNRVAIFRDREIDRKDPDYDRSYDRYLQRFDPGFGFNGGPYTIQPM 360

Query: 361 YAPAVNYNTEFPQLGSAPRQAVS-ECQPRPLPPHVSGPWNAQSSPAGLGYGHREAMIRPF 420
           Y PAVNYNTEFPQLGSA R  +S E QPRPLP H+SGPW A S+P G+GYGH E M+ PF
Sbjct: 361 YTPAVNYNTEFPQLGSAHRPQISTEHQPRPLPQHLSGPWPAPSTPTGIGYGHPETMMSPF 420

Query: 421 NPN-VDAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQQQPDASFGLARPR 473
           NPN V A S+S +YL SSQYPCQ+ GM FIHPHE  HQPFS  +QQQPD SFGLARPR
Sbjct: 421 NPNHVGARSTSTLYLPSSQYPCQRPGMPFIHPHEHVHQPFSQSHQQQPDTSFGLARPR 470

[Close]
BLAST of CmaCh18G009410 vs. NCBI nr
Match: gi|1009119449|ref|XP_015876388.1| (PREDICTED: uncharacterized protein LOC107413048 [Ziziphus jujuba])

HSP 1 Score: 610.1 bits (1572), Expect = 3.2e-171
Identity = 336/484 (69.42%), Postives = 386/484 (79.75%), Query Frame = 1 

Query: 1   MDGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFP 60
           M+GS  EDLGAPESWEVADLDE+MSRLML SS   K+SK+     AD +  S SSSAS  
Sbjct: 1   MEGSVQEDLGAPESWEVADLDESMSRLMLSSSR--KDSKT-HLEFADVSSASASSSASSS 60

Query: 61  SPSASTSSTP---------DRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICD 120
           S  + +SS+          D   +D+INQVDQFLREAL NPRERLSILRMEQDVEKFI D
Sbjct: 61  SSVSDSSSSAAVGGGGAGGDMVPDDLINQVDQFLREALQNPRERLSILRMEQDVEKFIHD 120

Query: 121 PARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAI 180
           P +QQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLD++  DGSGS+IIVRKT+ECRLP I
Sbjct: 121 PTQQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDSNSSDGSGSRIIVRKTNECRLPLI 180

Query: 181 RLADIPVNLPTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVEERKEEYNKARA 240
           RLADIPVNLP+EEN+ +KVAIKQRPQKRSQ    A+SNS KS  SKSVEERKEEYNKARA
Sbjct: 181 RLADIPVNLPSEENSALKVAIKQRPQKRSQNVNSANSNSIKSSNSKSVEERKEEYNKARA 240

Query: 241 RIFNSGSNSGSNAGGKVDADPRLQD-SFRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTS 300
           RIFNS SN    A GK +++ RLQD S  GSLG +K+E+K +S +P+ N  RG ID STS
Sbjct: 241 RIFNSSSNINIGASGKQESELRLQDGSQHGSLGISKLEDKSVSVIPEINSGRGFIDSSTS 300

Query: 301 SSRISRSRTDKELPSRQHKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGP 360
           S R +RSR +KE P  +++PN+RVAIFRDRE+D KDPDYDR+YDRYMQRFDPGF F+GGP
Sbjct: 301 SVRAARSRIEKE-PVVRYRPNNRVAIFRDREVDRKDPDYDRSYDRYMQRFDPGFGFNGGP 360

Query: 361 YTVQPMYAPAVNYNTEFPQLGSAPRQAVS-ECQPRPLPPHVSGPWNAQSSPAGLGYGHRE 420
           YT+QPMY PA+NYNTEFPQLGS  R  +S E QPRPLP H+ GPW A S+PAGLGYGH E
Sbjct: 361 YTIQPMYTPALNYNTEFPQLGSTHRPQISAEPQPRPLPQHLPGPWAAPSAPAGLGYGHPE 420

Query: 421 AMIRPFNP-NVDAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQQQPDASFGL 473
            ++ PFNP +V A S+SG+Y+HSSQYPCQ+ GM FIHPHE  HQ FS  +QQQPDASFGL
Sbjct: 421 TIMTPFNPSHVGARSASGMYMHSSQYPCQRPGMPFIHPHEHVHQQFSQSHQQQPDASFGL 480

The following BLAST results are available for this feature:
BLAST of CmaCh18G009410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
R3HD2_BOVIN1.4e-0933.13R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1[more]
ARP21_MOUSE1.4e-0933.11cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2[more]
ARP21_HUMAN1.8e-0933.33cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2[more]
R3HD2_MOUSE6.9e-0928.90R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2[more]
R3HD1_HUMAN3.8e-0726.11R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3[more]
BLAST of CmaCh18G009410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRF5_CUCSA1.4e-18991.69Uncharacterized protein OS=Cucumis sativus GN=Csa_5G615180 PE=4 SV=1[more]
F6HVQ2_VITVI1.5e-17270.71Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0106g00640 PE=4 SV=... [more]
A0A067KI62_JATCU1.6e-16969.75Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10418 PE=4 SV=1[more]
A0A061FWE8_THECC2.3e-16869.26Single-stranded nucleic acid binding R3H protein isoform 1 OS=Theobroma cacao GN... [more]
M5WGG5_PRUPE6.7e-16868.63Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005527mg PE=4 SV=1[more]
BLAST of CmaCh18G009410 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56680.11.4e-4436.79 Single-stranded nucleic acid binding R3H protein[more]
AT3G10770.13.9e-4243.55 Single-stranded nucleic acid binding R3H protein[more]
AT5G05100.16.6e-4239.82 Single-stranded nucleic acid binding R3H protein[more]
AT2G40960.11.5e-3836.07 Single-stranded nucleic acid binding R3H protein[more]
BLAST of CmaCh18G009410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659091848|ref|XP_008446764.1|1.5e-23491.12PREDICTED: R3H domain-containing protein 2-like [Cucumis melo][more]
gi|778706333|ref|XP_011655833.1|1.6e-23189.85PREDICTED: R3H domain-containing protein 2-like [Cucumis sativus][more]
gi|700197016|gb|KGN52193.1|2.0e-18991.69hypothetical protein Csa_5G615180 [Cucumis sativus][more]
gi|359486966|ref|XP_002265099.2|2.2e-17270.71PREDICTED: cAMP-regulated phosphoprotein 21 [Vitis vinifera][more]
gi|1009119449|ref|XP_015876388.1|3.2e-17169.42PREDICTED: uncharacterized protein LOC107413048 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001374R3H_dom
IPR024771SUZ
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G009410.1CmaCh18G009410.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001374R3H domainGENE3DG3DSA:3.30.1370.50coord: 98..165
score: 1.2
IPR001374R3H domainPFAMPF01424R3Hcoord: 98..145
score: 6.7
IPR001374R3H domainSMARTSM00393R3H_4coord: 79..163
score: 3.
IPR001374R3H domainPROFILEPS51061R3Hcoord: 95..164
score: 10
IPR001374R3H domainunknownSSF82708R3H domaincoord: 75..198
score: 6.28
IPR024771SUZ domainPFAMPF12752SUZcoord: 188..237
score: 1.6
IPR024771SUZ domainPROFILEPS51673SUZcoord: 167..238
score: 12
NoneNo IPR availablePANTHERPTHR15672CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEINcoord: 11..472
score: 4.2E