CmoCh04G014390 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAACGCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTCATTCAATGCTTTGTTCGTGCCCGGCGCCGGCGGCGGAGATGAGCTTACGTCAGGCGAAGGTGCGGGTGGTGAGATGTTGGTGTCGGGTGGCGGTGGTGGACTCTCAGTGGTATTTGATGGTGGCGGAGGCGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGGCTGCCAGTTGTGTTGGATGGCACTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGCGGCGGTGCACCATCGGTTGTATTCAACGGCGGCGGTGGAGGAGGAGGAGATGCATCTTGA ATGCAAATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAACGCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTCATTCAATGCTTTGTTCGTGCCCGGCGCCGGCGGCGGAGATGAGCTTACGTCAGGCGAAGGTGCGGGTGGTGAGATGTTGGTGTCGGGTGGCGGTGGTGGACTCTCAGTGGTATTTGATGGTGGCGGAGGCGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGGCTGCCAGTTGTGTTGGATGGCACTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGCGGCGGTGCACCATCGGTTGTATTCAACGGCGGCGGTGGAGGAGGAGGAGATGCATCTTGA ATGCAAATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAACGCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTCATTCAATGCTTTGTTCGTGCCCGGCGCCGGCGGCGGAGATGAGCTTACGTCAGGCGAAGGTGCGGGTGGTGAGATGTTGGTGTCGGGTGGCGGTGGTGGACTCTCAGTGGTATTTGATGGTGGCGGAGGCGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGGCTGCCAGTTGTGTTGGATGGCACTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGCGGCGGTGCACCATCGGTTGTATTCAACGGCGGCGGTGGAGGAGGAGGAGATGCATCTTGA
BLAST of CmoCh04G014390 vs. TrEMBL
Match: A8E425_PSEVI (HrpW OS=Pseudomonas viridiflava GN=hrpW PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.5e-07 Identity = 64/106 (60.38%), Postives = 66/106 (62.26%), Query Frame = 1
BLAST of CmoCh04G014390 vs. TrEMBL
Match: Q8WSL3_PLAVN (Circumsporozoite protein OS=Plasmodium vinckei petteri GN=CS PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.5e-07 Identity = 75/139 (53.96%), Postives = 82/139 (58.99%), Query Frame = 1
BLAST of CmoCh04G014390 vs. TrEMBL
Match: R7UA08_CAPTE (Uncharacterized protein OS=Capitella teleta GN=CAPTEDRAFT_195602 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06 Identity = 62/120 (51.67%), Postives = 72/120 (60.00%), Query Frame = 1
BLAST of CmoCh04G014390 vs. NCBI nr
Match: gi|659092081|ref|XP_008446890.1| (PREDICTED: serine, glycine, tyrosine and glutamine-rich protein-like isoform X1 [Cucumis melo]) HSP 1 Score: 106.7 bits (265), Expect = 3.9e-20 Identity = 80/125 (64.00%), Postives = 91/125 (72.80%), Query Frame = 1
BLAST of CmoCh04G014390 vs. NCBI nr
Match: gi|659092083|ref|XP_008446891.1| (PREDICTED: serine, glycine, tyrosine and glutamine-rich protein-like isoform X2 [Cucumis melo]) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-18 Identity = 77/117 (65.81%), Postives = 89/117 (76.07%), Query Frame = 1
BLAST of CmoCh04G014390 vs. NCBI nr
Match: gi|62001501|gb|AAX58457.1| (HrpW [Pseudomonas viridiflava]) HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07 Identity = 64/106 (60.38%), Postives = 66/106 (62.26%), Query Frame = 1
BLAST of CmoCh04G014390 vs. NCBI nr
Match: gi|17221667|gb|AAL36454.1|AF162332_1 (circumsporozoite protein [Plasmodium vinckei petteri]) HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07 Identity = 75/139 (53.96%), Postives = 82/139 (58.99%), Query Frame = 1
BLAST of CmoCh04G014390 vs. NCBI nr
Match: gi|443707736|gb|ELU03205.1| (hypothetical protein CAPTEDRAFT_195602 [Capitella teleta]) HSP 1 Score: 60.8 bits (146), Expect = 2.4e-06 Identity = 62/120 (51.67%), Postives = 72/120 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |