CmoCh04G012150 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAATGCTCCTGACTTCTGGCTTCTTCACTTCCATTTTGGGCACCGTCACCGTCAGCACCCCATTCTCCATGTTGGCCTTCACCTCTTCTACTTTCGCATTCTCCGGCAGCCTGAATCTCCTCATGAACTTCCCACTGCTTCTTTCAATTCTATGCCACTTGTCGTTCTTCTCCTCCTGCTCTTTGCTTCTCTCTCCGCTGATCTGCAGAACTCCCCCTTCTTCANNNTGCAGAACTCCCCCTTCTTCAATTTCAACCTTCACTTCCTCCTTTTTGATCCCCGGAAGATCCGCCTTCAACACGTGGGCTTCTGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGAGGAGGGGACGTTGGCCAGAGAGCTTGAAAATGGTAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATCGCTGAAAGTGATACTTGA ATGTCAATGCTCCTGACTTCTGGCTTCTTCACTTCCATTTTGGGCACCGTCACCGTCAGCACCCCATTCTCCATGTTGGCCTTCACCTCTTCTACTTTCGCATTCTCCGGCAGCCTGAATCTCCTCATGAACTTCCCACTGCTTCTTTCAATTCTATGCCACTTGTCATCCGCCTTCAACACGTGGGCTTCTGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGAGGAGGGGACGTTGGCCAGAGAGCTTGAAAATGGTAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATCGCTGAAAGTGATACTTGA ATGTCAATGCTCCTGACTTCTGGCTTCTTCACTTCCATTTTGGGCACCGTCACCGTCAGCACCCCATTCTCCATGTTGGCCTTCACCTCTTCTACTTTCGCATTCTCCGGCAGCCTGAATCTCCTCATGAACTTCCCACTGCTTCTTTCAATTCTATGCCACTTGTCATCCGCCTTCAACACGTGGGCTTCTGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGAGGAGGGGACGTTGGCCAGAGAGCTTGAAAATGGTAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATCGCTGAAAGTGATACTTGA
BLAST of CmoCh04G012150 vs. TrEMBL
Match: A0A0A0KSC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197120 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-24 Identity = 88/164 (53.66%), Postives = 98/164 (59.76%), Query Frame = 1
BLAST of CmoCh04G012150 vs. TrEMBL
Match: A0A0D9Z548_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.7e-18 Identity = 74/139 (53.24%), Postives = 81/139 (58.27%), Query Frame = 1
BLAST of CmoCh04G012150 vs. TrEMBL
Match: A0A0E0AGQ8_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 8.9e-17 Identity = 70/128 (54.69%), Postives = 78/128 (60.94%), Query Frame = 1
BLAST of CmoCh04G012150 vs. TrEMBL
Match: T1MGU4_TRIUA (Uncharacterized protein OS=Triticum urartu PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.7e-15 Identity = 76/155 (49.03%), Postives = 82/155 (52.90%), Query Frame = 1
BLAST of CmoCh04G012150 vs. TrEMBL
Match: A0A0P0UXN9_ORYSJ (Os01g0136050 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0136050 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.6e-13 Identity = 72/154 (46.75%), Postives = 80/154 (51.95%), Query Frame = 1
BLAST of CmoCh04G012150 vs. NCBI nr
Match: gi|700195444|gb|KGN50621.1| (hypothetical protein Csa_5G197120 [Cucumis sativus]) HSP 1 Score: 120.9 bits (302), Expect = 1.7e-24 Identity = 88/164 (53.66%), Postives = 98/164 (59.76%), Query Frame = 1
BLAST of CmoCh04G012150 vs. NCBI nr
Match: gi|937894281|dbj|BAS70261.1| (Os01g0136050, partial [Oryza sativa Japonica Group]) HSP 1 Score: 82.4 bits (202), Expect = 6.6e-13 Identity = 72/154 (46.75%), Postives = 80/154 (51.95%), Query Frame = 1
BLAST of CmoCh04G012150 vs. NCBI nr
Match: gi|548832992|gb|ERM95761.1| (hypothetical protein AMTR_s00023p00249070 [Amborella trichopoda]) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-11 Identity = 71/156 (45.51%), Postives = 73/156 (46.79%), Query Frame = 1
BLAST of CmoCh04G012150 vs. NCBI nr
Match: gi|976925993|gb|KVI09872.1| (hypothetical protein Ccrd_011724 [Cynara cardunculus var. scolymus]) HSP 1 Score: 77.8 bits (190), Expect = 1.6e-11 Identity = 62/133 (46.62%), Postives = 69/133 (51.88%), Query Frame = 1
BLAST of CmoCh04G012150 vs. NCBI nr
Match: gi|976929048|gb|KVI11914.1| (hypothetical protein Ccrd_009654, partial [Cynara cardunculus var. scolymus]) HSP 1 Score: 73.9 bits (180), Expect = 2.3e-10 Identity = 61/147 (41.50%), Postives = 77/147 (52.38%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |