CmoCh04G007490 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACCAAATCGCATTCTGTGTCTTCTGATTTGATTTCTATCGATGACGATAACCTTGAATGCCGGAGCATTTCAGAGTTGGTTTCGATTCTGCGGACGGCTTTCCGGGCAAGAGATTTCGACAAAGTGGAGGCGGTTTTGGTTGCCAAGGAAGTAAAAATGAGGAAAGAGATCGAGAACAAGAACAAAGAGTATGAATTGCTCCAAAGCAAATACGAGTTTCTAAGACTGGACATTCTCACTCACGAATCCATGCTCGAGCAAGATAAGGTTGATCCTAAAGGATTTGAGAAGTGGAAGGAAATATATGAAGAGTTGAAGGAGAAGGAGAGTGAGATTCAACAACTCAAGGATTTGATTTTCAAAGTAAATGAGGATAGAGAGAAGAAGAAAAGCGCTTTGGAGGGATTTGAGAAATTGCTGGAAACGGTCAAGAAAACACAGGAAGATCAAAGGATCACTATAGAGAAGCTTATCCACAAGAATTCAGAATTAGAATGTGCAATGGAGGTGGTTAAGAAAGTAAAGGAAGATCATGTGAAAACCATAGAGGAGCTTAGATGCAAGAACTTAAAATTAGAATGTTCACTAGAGGAGCTTAACTACAGGAAATCAGATTTGGAACGTACAGTAGAAGTGGTCAAGAAGACAGAGGAAGATGAAAGGAAGTATGTCGAGGAGCTTAAATGCAAGAATTCAAAATTAGAAATTGCGAAAAGAGAAGCTGAGCATAACTACGAACTGTGTAGAAGGAAATATGATGAACTCGGCCGCCGAGTCTCACAATTGGAGAACAAAAACGACTCTATATCAGGAGGAGCTTGCGTTGGTGGTTCCAGAAAATTGGTTGGTATGCAAGCCGAGAATCGAACAGGTATGCTAGAACAGAAAGTTCACTACTTGCATATTAAGTAAATGCGATTGATTGTCAAAAATGATATCACAATTCTATGAACAGCTCACTTATAAGCCTCTCCACTGGCTAGAAAATTGGAAGTTTGGGAAGTGCAGGCATTAGAAATTTATTTAGTATTAACACCTGCTAGGTAGATCTTTAATAAGGAATCATACCTATGCTGCCTCTGAATGGAAATCTTGATATGAGCTTAAACTTTGTTTATTTATTGAATAAAATGTTAATCCATTGGCTTCATACAATTTGTGCATTGATTTTAAGAATATAGCTATTGTGTTATGCTCATGCATCATTATTGGGTTATGGCAGAAGATAATACACAAAATTGGGCTTAGTTCATCTTTGAAGGTATTTTTCTCCGTGTATAAGTTTATGATGTTATTTTTCTCCGTGTATAAGCCAAAGTACAGACATCTTAAATTTTTATGTACGTAGCCACCGATGAATGTATATACGCATGAAACAAATTTGGGCATACGCAAGTATGATTGGAATTATTTATTCACTTGACCAAGGTATCTTTTCTTCCTAGGTACTGAAGGATTCATGGTGGAAATCATTAGTGATGATGATCATGCTCCAGTGAAGAATTCATCCAGAGCACGCAGAAAAGAAAAGAGAACGTGGGATTTATTACTAAACGATTGTGAAGATTACGATCCCGAAAGAGATGATGAAAAGATATCCACCTTGCCCAGTGAAACTAATGGCAAGGAGGCATTGAAGAAAGTAGGGGCAATGTATGCAACACCTCCACATGGTCGTCCTGACAATCATGTTTTGAAAAGGCATATTTCTACTCGTACTAATGATTCCAAGAACGTGATGTCCTCTTCAAGGGCGGTTGCAGTCATGTTGAGGGAAGAATGTAAATCACATAATTCCATGTTCAAGTATGCTTCATTTGGTTTCAACTACTTTAATGAGGACTGTTCCTTTTTCTCGGATTCTGATTGTGAGATTCAAAATAGATACGACTCAACTCATCTTAAGTCAAAGGGCCAAGGGAAGAGGAGTAATAAAAAATGGGGGTCGGAGGCTGAAATGCGTGCTGCATTTGATGAAAATGATATGCTTTGCATGGAAGCTGTTTGTATCCTCTACAGACAATCAAGTTTAGTGGGAAAGCCTCGTAGTGCATATTTGCCTTCCAGACATAGAGGATTTCATGAGGTTGATTTGCTCAGGTATCTCCTGAACTTTTTCAACGATGCATCTTTATTACATCAAATTTTTTTTGTTTGATTTCTTGGATTGCAAGGCTAGCTTCTGTTGGGAGCTTGATTGGCTCTTGTAACATATGAACTGTTCGTTATTGCACGATGTGGCTTGGATTTGAATAGAATCCTAGATTTATCTTAAGATACTTGCAATTATTATTAAAAGTTTGAAAATAAGAAAGAAGTTTTCCCACGATTAAACGATATTTCTTAATTTGATTCGCACAATCATTCAAAACGCGTAAATCATTTCATCTGTTAGATTCTAATTTCTTATTAACTATGCTATCTTTTAGTATGCTCCTACAGTTTACTCTACTACCTGTAGTGAAAATTTTGATGTTTCAAGTCTTTTGACACAAGCACCTAAGAAGCCCAGTTTTGAGTTCCCTTTACATATGTTTCCAATGCTTTAAGCTATTTTCGGGTATCAACCTAAACGACGATTTCTGTTACTTTCTAGTGTTTTGTGCCTGTCTTTTGTGGTGATTGTTTGTGCATGGAAGTCTTCACAACTGAGTGATGCTCTTGTAAAGCTAGTTGAGGAAGTAGTGTGCGTTAAAATTTTCTTGATCAAAATTTCTCCAGGGGTTCAACATTGGCATTGTTTCTAACCGGCGGAGATTCACAAGGGAAGCTAAAGAGATCTGTGATGGAGTTGGAGAAATTCGACATATGTGGTCTTATCGACTGCAGAAGAATCTCCATCGAGCATTTGGAGCAGTTATTTGAAATCTATAAGAACAGTGAAGATCAATTCCTATTCCAGTAA ATGGCTACCAAATCGCATTCTGTGTCTTCTGATTTGATTTCTATCGATGACGATAACCTTGAATGCCGGAGCATTTCAGAGTTGGTTTCGATTCTGCGGACGGCTTTCCGGGCAAGAGATTTCGACAAAGTGGAGGCGGTTTTGGTTGCCAAGGAAGTAAAAATGAGGAAAGAGATCGAGAACAAGAACAAAGAGTATGAATTGCTCCAAAGCAAATACGAGTTTCTAAGACTGGACATTCTCACTCACGAATCCATGCTCGAGCAAGATAAGGTTGATCCTAAAGGATTTGAGAAGTGGAAGGAAATATATGAAGAGTTGAAGGAGAAGGAGAGTGAGATTCAACAACTCAAGGATTTGATTTTCAAAGTAAATGAGGATAGAGAGAAGAAGAAAAGCGCTTTGGAGGGATTTGAGAAATTGCTGGAAACGGTCAAGAAAACACAGGAAGATCAAAGGATCACTATAGAGAAGCTTATCCACAAGAATTCAGAATTAGAATGTGCAATGGAGGTGGTTAAGAAAGTAAAGGAAGATCATGTGAAAACCATAGAGGAGCTTAGATGCAAGAACTTAAAATTAGAATGTTCACTAGAGGAGCTTAACTACAGGAAATCAGATTTGGAACGTACAGTAGAAGTGGTCAAGAAGACAGAGGAAGATGAAAGGAAGTATGTCGAGGAGCTTAAATGCAAGAATTCAAAATTAGAAATTGCGAAAAGAGAAGCTGAGCATAACTACGAACTGTGTAGAAGGAAATATGATGAACTCGGCCGCCGAGTCTCACAATTGGAGAACAAAAACGACTCTATATCAGGAGGAGCTTGCGTTGGTGGTTCCAGAAAATTGGTTGGTATGCAAGCCGAGAATCGAACAGGTACTGAAGGATTCATGGTGGAAATCATTAGTGATGATGATCATGCTCCAGTGAAGAATTCATCCAGAGCACGCAGAAAAGAAAAGAGAACGTGGGATTTATTACTAAACGATTGTGAAGATTACGATCCCGAAAGAGATGATGAAAAGATATCCACCTTGCCCAGTGAAACTAATGGCAAGGAGGCATTGAAGAAAGTAGGGGCAATGTATGCAACACCTCCACATGGTCGTCCTGACAATCATGTTTTGAAAAGGCATATTTCTACTCGTACTAATGATTCCAAGAACGTGATGTCCTCTTCAAGGGCGGTTGCAGTCATGTTGAGGGAAGAATGTAAATCACATAATTCCATGTTCAAGTATGCTTCATTTGGTTTCAACTACTTTAATGAGGACTGTTCCTTTTTCTCGGATTCTGATTGTGAGATTCAAAATAGATACGACTCAACTCATCTTAAGTCAAAGGGCCAAGGGAAGAGGAGTAATAAAAAATGGGGGTCGGAGGCTGAAATGCGTGCTGCATTTGATGAAAATGATATGCTTTGCATGGAAGCTGTTTGTATCCTCTACAGACAATCAAGTTTAGTGGGAAAGCCTCGTAGTGCATATTTGCCTTCCAGACATAGAGGATTTCATGAGGTTGATTTGCTCAGGGGTTCAACATTGGCATTGTTTCTAACCGGCGGAGATTCACAAGGGAAGCTAAAGAGATCTGTGATGGAGTTGGAGAAATTCGACATATGTGGTCTTATCGACTGCAGAAGAATCTCCATCGAGCATTTGGAGCAGTTATTTGAAATCTATAAGAACAGTGAAGATCAATTCCTATTCCAGTAA ATGGCTACCAAATCGCATTCTGTGTCTTCTGATTTGATTTCTATCGATGACGATAACCTTGAATGCCGGAGCATTTCAGAGTTGGTTTCGATTCTGCGGACGGCTTTCCGGGCAAGAGATTTCGACAAAGTGGAGGCGGTTTTGGTTGCCAAGGAAGTAAAAATGAGGAAAGAGATCGAGAACAAGAACAAAGAGTATGAATTGCTCCAAAGCAAATACGAGTTTCTAAGACTGGACATTCTCACTCACGAATCCATGCTCGAGCAAGATAAGGTTGATCCTAAAGGATTTGAGAAGTGGAAGGAAATATATGAAGAGTTGAAGGAGAAGGAGAGTGAGATTCAACAACTCAAGGATTTGATTTTCAAAGTAAATGAGGATAGAGAGAAGAAGAAAAGCGCTTTGGAGGGATTTGAGAAATTGCTGGAAACGGTCAAGAAAACACAGGAAGATCAAAGGATCACTATAGAGAAGCTTATCCACAAGAATTCAGAATTAGAATGTGCAATGGAGGTGGTTAAGAAAGTAAAGGAAGATCATGTGAAAACCATAGAGGAGCTTAGATGCAAGAACTTAAAATTAGAATGTTCACTAGAGGAGCTTAACTACAGGAAATCAGATTTGGAACGTACAGTAGAAGTGGTCAAGAAGACAGAGGAAGATGAAAGGAAGTATGTCGAGGAGCTTAAATGCAAGAATTCAAAATTAGAAATTGCGAAAAGAGAAGCTGAGCATAACTACGAACTGTGTAGAAGGAAATATGATGAACTCGGCCGCCGAGTCTCACAATTGGAGAACAAAAACGACTCTATATCAGGAGGAGCTTGCGTTGGTGGTTCCAGAAAATTGGTTGGTATGCAAGCCGAGAATCGAACAGGTACTGAAGGATTCATGGTGGAAATCATTAGTGATGATGATCATGCTCCAGTGAAGAATTCATCCAGAGCACGCAGAAAAGAAAAGAGAACGTGGGATTTATTACTAAACGATTGTGAAGATTACGATCCCGAAAGAGATGATGAAAAGATATCCACCTTGCCCAGTGAAACTAATGGCAAGGAGGCATTGAAGAAAGTAGGGGCAATGTATGCAACACCTCCACATGGTCGTCCTGACAATCATGTTTTGAAAAGGCATATTTCTACTCGTACTAATGATTCCAAGAACGTGATGTCCTCTTCAAGGGCGGTTGCAGTCATGTTGAGGGAAGAATGTAAATCACATAATTCCATGTTCAAGTATGCTTCATTTGGTTTCAACTACTTTAATGAGGACTGTTCCTTTTTCTCGGATTCTGATTGTGAGATTCAAAATAGATACGACTCAACTCATCTTAAGTCAAAGGGCCAAGGGAAGAGGAGTAATAAAAAATGGGGGTCGGAGGCTGAAATGCGTGCTGCATTTGATGAAAATGATATGCTTTGCATGGAAGCTGTTTGTATCCTCTACAGACAATCAAGTTTAGTGGGAAAGCCTCGTAGTGCATATTTGCCTTCCAGACATAGAGGATTTCATGAGGTTGATTTGCTCAGGGGTTCAACATTGGCATTGTTTCTAACCGGCGGAGATTCACAAGGGAAGCTAAAGAGATCTGTGATGGAGTTGGAGAAATTCGACATATGTGGTCTTATCGACTGCAGAAGAATCTCCATCGAGCATTTGGAGCAGTTATTTGAAATCTATAAGAACAGTGAAGATCAATTCCTATTCCAGTAA
BLAST of CmoCh04G007490 vs. TrEMBL
Match: A0A0A0KYB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051390 PE=4 SV=1) HSP 1 Score: 621.3 bits (1601), Expect = 1.2e-174 Identity = 356/567 (62.79%), Postives = 415/567 (73.19%), Query Frame = 1
BLAST of CmoCh04G007490 vs. TrEMBL
Match: A0A067K0K5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20485 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 3.4e-25 Identity = 165/576 (28.65%), Postives = 260/576 (45.14%), Query Frame = 1
BLAST of CmoCh04G007490 vs. TrEMBL
Match: A0A0D2T7R3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G270900 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 3.3e-20 Identity = 62/147 (42.18%), Postives = 87/147 (59.18%), Query Frame = 1
BLAST of CmoCh04G007490 vs. TrEMBL
Match: A0A151TYH4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_004706 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 9.6e-20 Identity = 63/158 (39.87%), Postives = 91/158 (57.59%), Query Frame = 1
BLAST of CmoCh04G007490 vs. TrEMBL
Match: A0A072VEK8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_1g028880 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 9.6e-20 Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 1
BLAST of CmoCh04G007490 vs. TAIR10
Match: AT5G53220.1 (AT5G53220.1 unknown protein) HSP 1 Score: 105.9 bits (263), Expect = 8.3e-23 Identity = 89/279 (31.90%), Postives = 144/279 (51.61%), Query Frame = 1
BLAST of CmoCh04G007490 vs. TAIR10
Match: AT1G77580.2 (AT1G77580.2 Plant protein of unknown function (DUF869)) HSP 1 Score: 49.7 bits (117), Expect = 7.0e-06 Identity = 87/328 (26.52%), Postives = 152/328 (46.34%), Query Frame = 1
BLAST of CmoCh04G007490 vs. NCBI nr
Match: gi|659102136|ref|XP_008451970.1| (PREDICTED: intracellular protein transport protein USO1-like [Cucumis melo]) HSP 1 Score: 682.2 bits (1759), Expect = 7.9e-193 Identity = 377/582 (64.78%), Postives = 446/582 (76.63%), Query Frame = 1
BLAST of CmoCh04G007490 vs. NCBI nr
Match: gi|778691009|ref|XP_011653209.1| (PREDICTED: TSA1-like protein [Cucumis sativus]) HSP 1 Score: 621.3 bits (1601), Expect = 1.7e-174 Identity = 356/567 (62.79%), Postives = 415/567 (73.19%), Query Frame = 1
BLAST of CmoCh04G007490 vs. NCBI nr
Match: gi|700198229|gb|KGN53387.1| (hypothetical protein Csa_4G051390 [Cucumis sativus]) HSP 1 Score: 621.3 bits (1601), Expect = 1.7e-174 Identity = 356/567 (62.79%), Postives = 415/567 (73.19%), Query Frame = 1
BLAST of CmoCh04G007490 vs. NCBI nr
Match: gi|659102134|ref|XP_008451969.1| (PREDICTED: myosin heavy chain, striated muscle-like [Cucumis melo]) HSP 1 Score: 290.8 bits (743), Expect = 5.1e-75 Identity = 170/254 (66.93%), Postives = 202/254 (79.53%), Query Frame = 1
BLAST of CmoCh04G007490 vs. NCBI nr
Match: gi|802734940|ref|XP_012086762.1| (PREDICTED: girdin-like [Jatropha curcas]) HSP 1 Score: 124.8 bits (312), Expect = 4.9e-25 Identity = 165/576 (28.65%), Postives = 260/576 (45.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |