CSPI04G06200 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTACGAATTTTGAAATGGCGATCGAGTCTTGTGCTACTTTGAATTCTGTTGATGATGATAACTTTGAGAGTCGGAGTATATCGGAGTTAGTTTCGTTTTTACGGACGGCTTTTAGGGCTAAGGATTTCGACAAGGTGGAGGAGGCTTTGGTTGCTAAAGAAGTAAAGATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATACGAGTTTCTGAGGCTTGACAATCTTACTCATAAATCCATGGTCGAGCAAGACAAGGTTGAGGTTGATCCTAAAGGATTTGGTAAGTGGAAGGAAAGGTTTGAGGAGTTGAAGGAGATGGAGAGTGAGATTCAACAACTCAAGGAATTGATTATTAAAGTGAATGAGGATAGAGAGAAGAAGAAGAGTGCTTTGGACGGGTTTGAGAAAATGCTTGAAGCGGTTAAGGAAGCTCAGGAGGACGATAGATTGACCATACAAAAGCTTAAGCACAAGAATTCAGAATTACAATCTGCAATTGAAGCGGCCAAGAGAGAAAATGATGAGCATGAGAAGTCTATTGAGGAACTTAGAACCAAGAATTTAAAACTCGTATATGCAATCAAGAAAACAGAGGAAGATAGCCGAAGGGACATGGAGGAACATTATTACGAGCGTCGAAGGAAATATGAAGAACTTTCATGCCGAGTATCGCAGTTGGAGAATGTAAGGACAGTTATTGAAAAAGGGGAGCCCATTGCTTCAAACAGAAACGAATTCAACCTCGAGAACCGAATAGGTATGTTATAGAAAGTAAATGTGATTGATTGTAAAAAAGGCTATCACACCACCACATAGTTGAAATCCACTCCGCAGGCATTAGAAAGTGTTAGTATTTACAACTGCTTGGTAGATCTTTAATATGCATTAATAAATATATACACAAAGCATATGCTGTCTCTGAACGAGAGTATTGCAAAGGGTATATTGTTATTAGCTAAAACTTCGTGTATTTATTGAATAAAACGCTGCTCGGAGTTAAATCCATGGGTTACACGTAATACCTAGGTTTAATCATGAATATATGAATGTCATTTGAGATGCTTATTTATGTCGGAGCTTGTTACAATTTTCATCACTTCGTTTTCTCTCAAGGTAATGTGACAAACTATTTACATACAAGGAATAGTAAGACTAGAATGCTTGGAATAGTTAAGTCATACCCAACTCGACCTAGAAACTTGGGATGAATATGGTATTTCTTTTCTGAAAGGTTTTTAAAAGTACAAATAAGGAGGAGGAGTTGAAGCCAAGACCTTTACATAAGTGTCAATTACTAAACTCTTGATGGCGGTATTTGGTGATACTCAAAACTAGTTATAATTTTATAGACCACTGCTTTAAAAGTAAAAGATAAATTTCTGTTTTATATATTGGTTTTAAGAATAAAGCTATTTTGCTATGCTCTGTGATATGGCAGAAGATTAAAAAAAGACCAACTAACAAAATTGTGCTTAGTTCACCTTTGTCTTTGATGGTATTTTTGTCCATATATAATTTTATGACATTATTTTGGATTGCTGCCAATTCTCCATACGATTAGTTTTGGCAGGCTAAGTTGTAATCATTTTAATTATGCACACACACACATGAAACAAATTTGGGACTATTCATGTAGGGTGGGAATTACTTATTCACATGATCAAGGTACCTGTTCTTCCTAGGTACTGGAGGATCCTTTGTTGAGATAATTAGTGATGATGATCATGCCACCCGAGAAAATTTGTTTCGAGCGCATAGAAACCAGAAGAGAAGACGAGATTCATTGTTAAATGATTGTGAAGATTACCATGCGGAAAAGGAAGATGATCAGATGACCATTCTGCCTAATGTAAGCAAGGGTATGGAGTCATTGAAGAAAGTAGGGGCAATGTTTTCTGCACCTCCACGTGGTCGACCAAACAAACATGCCTCGAAAATGCAATTTTCTCCTAGGTCCAATGATTTCAAGAACATCACAACCTCTTCAAGGGCTGCTACAGTCATGCTGACGCAATGTGCAGAAGTTGGGGAAGGATGTAGATCACTTGATTCTAAGTTCAAGTATGCTTCATTTCGTATGGACTATTTCAATGACGACTATTTCATTTCGTCGGATTCTGATGGTGATATCCAAAATAGATATGGGTCAAGTCATTTAAAGTCAAAAGACCGGAGATGTAATAAAAAGTGGAACTTGGAGGCCGAAATGCTTGCTGCATTTGCTGAAAATGATGTGCTTTGCATGGAGGCTGTCTGTATACTTTATCGACAATCAAGTTTAATTGGAAAACCATACAATGCATCCACGCCTTCCAGGCATATAGGATTCGATGAGGCTGATTTGCTCAGGTATCTAATCAATTTTTTCACATTTGCATATTTATTATTGATCACACCATAAATTTTTTGCTCGATTTCTTGGATTGTATGTTAGGTTTTTTTGGAATCTTAACTGACTCGTTTGTTATGTTAGGCTGATTGCATGCTAGATTTGTCTCTAGGTACTTGAAATTATTATATAAGGTTCTAAAATAAGAAGCAAGTTCCGTGTTTTAGAATGATTTATCATATCTCCGCCTGCAATTGTTGAACTTAAAATGTATGCTCCAAATATGTATTCTACTTTGAATCTCTCGACACAAGCATGGAGTGCTCAGTTTTGAGTTCTCTTTACGTCTGTTTCCATCTTTTAACTCTATATTCAGTTATACCTTGATTACATAACAAAGTTTCAGTTCTTTCTACCGTTTTGTGCCTGTCTATGTGGCGATTGTTTGTACATGGGAAATATTTTCGTAACTTTGAGTGATGTTATGTAAAGCTAGGTGAGGCACAATAGTGTGTGTGGCATTAGATATTCTGACCAAATTTTATCCAGGGGTTCCACATTGGCATTGTTTCTAACCAACCGAGATCCAAATGGGAAATTGAAGAAATCTGTGACAGAGTTGGAGAAATTTGACATAAGTGGTCTTATTGACTGCAGAAGAATCGCCATCCAACATTCGAAGCAGTTATTTGAAATATATAAGAACAACAAAGATCAATTCCATTTCCATTAAAGGGAGGACAGGCTTGAACCCTTTGATGCACAGATAAATCTCATGCTGAAGTCTGATTGATGATCCATTTCCTTCCTTCCTCTTTCCTGCTAATTTATCAATGTAAGATCTTTTGTCTATATCTTGGTGCACACTGCTCAAACTATGCTGACTAGATAGCGATGTAGATAATCAACAGGGACATAAAGAATTCAAGAACTCCCATTACAATTGTTGTTGCATATGAGGGTTAAAGCCAATACTTTTACCTTCAAATTAGTTTGTTAGAACTTAGAATTTAGAAACTAGTTTCCTTATTTAGAACCATCCAGCAACCGTGTTTTACAATATATTACTAGAATCAGAGAAAGCTTACTTGATTGGTACAAAAGTTCCAGTCTGATTTGGATAGAAAAATGGCCCAGATTTAATCTCTATTACTAGTTTTGTCAATTTCTTTTCTTCTAGTTTTGGACAATCTGTAGGGAGTTTTGTGGAAAGGAAATAAATGGCCACCATGTTGTGGGAAAGCCGTGTCTTCTTATCATCTCTGTTTTTCTCCC ATGTCTACGAATTTTGAAATGGCGATCGAGTCTTGTGCTACTTTGAATTCTGTTGATGATGATAACTTTGAGAGTCGGAGTATATCGGAGTTAGTTTCGTTTTTACGGACGGCTTTTAGGGCTAAGGATTTCGACAAGGTGGAGGAGGCTTTGGTTGCTAAAGAAGTAAAGATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATACGAGTTTCTGAGGCTTGACAATCTTACTCATAAATCCATGGTCGAGCAAGACAAGGTTGAGGTTGATCCTAAAGGATTTGGTAAGTGGAAGGAAAGGTTTGAGGAGTTGAAGGAGATGGAGAGTGAGATTCAACAACTCAAGGAATTGATTATTAAAGTGAATGAGGATAGAGAGAAGAAGAAGAGTGCTTTGGACGGGTTTGAGAAAATGCTTGAAGCGGTTAAGGAAGCTCAGGAGGACGATAGATTGACCATACAAAAGCTTAAGCACAAGAATTCAGAATTACAATCTGCAATTGAAGCGGCCAAGAGAGAAAATGATGAGCATGAGAAGTCTATTGAGGAACTTAGAACCAAGAATTTAAAACTCGTATATGCAATCAAGAAAACAGAGGAAGATAGCCGAAGGGACATGGAGGAACATTATTACGAGCGTCGAAGGAAATATGAAGAACTTTCATGCCGAGTATCGCAGTTGGAGAATGTAAGGACAGTTATTGAAAAAGGGGAGCCCATTGCTTCAAACAGAAACGAATTCAACCTCGAGAACCGAATAGGTACTGGAGGATCCTTTGTTGAGATAATTAGTGATGATGATCATGCCACCCGAGAAAATTTGTTTCGAGCGCATAGAAACCAGAAGAGAAGACGAGATTCATTGTTAAATGATTGTGAAGATTACCATGCGGAAAAGGAAGATGATCAGATGACCATTCTGCCTAATGTAAGCAAGGGTATGGAGTCATTGAAGAAAGTAGGGGCAATGTTTTCTGCACCTCCACGTGGTCGACCAAACAAACATGCCTCGAAAATGCAATTTTCTCCTAGGTCCAATGATTTCAAGAACATCACAACCTCTTCAAGGGCTGCTACAGTCATGCTGACGCAATGTGCAGAAGTTGGGGAAGGATGTAGATCACTTGATTCTAAGTTCAAGTATGCTTCATTTCGTATGGACTATTTCAATGACGACTATTTCATTTCGTCGGATTCTGATGGTGATATCCAAAATAGATATGGGTCAAGTCATTTAAAGTCAAAAGACCGGAGATGTAATAAAAAGTGGAACTTGGAGGCCGAAATGCTTGCTGCATTTGCTGAAAATGATGTGCTTTGCATGGAGGCTGTCTGTATACTTTATCGACAATCAAGTTTAATTGGAAAACCATACAATGCATCCACGCCTTCCAGGCATATAGGATTCGATGAGGCTGATTTGCTCAGGGGTTCCACATTGGCATTGTTTCTAACCAACCGAGATCCAAATGGGAAATTGAAGAAATCTGTGACAGAGTTGGAGAAATTTGACATAAGTGGTCTTATTGACTGCAGAAGAATCGCCATCCAACATTCGAAGCAGTTATTTGAAATATATAAGAACAACAAAGATCAATTCCATTTCCATTAA ATGTCTACGAATTTTGAAATGGCGATCGAGTCTTGTGCTACTTTGAATTCTGTTGATGATGATAACTTTGAGAGTCGGAGTATATCGGAGTTAGTTTCGTTTTTACGGACGGCTTTTAGGGCTAAGGATTTCGACAAGGTGGAGGAGGCTTTGGTTGCTAAAGAAGTAAAGATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATACGAGTTTCTGAGGCTTGACAATCTTACTCATAAATCCATGGTCGAGCAAGACAAGGTTGAGGTTGATCCTAAAGGATTTGGTAAGTGGAAGGAAAGGTTTGAGGAGTTGAAGGAGATGGAGAGTGAGATTCAACAACTCAAGGAATTGATTATTAAAGTGAATGAGGATAGAGAGAAGAAGAAGAGTGCTTTGGACGGGTTTGAGAAAATGCTTGAAGCGGTTAAGGAAGCTCAGGAGGACGATAGATTGACCATACAAAAGCTTAAGCACAAGAATTCAGAATTACAATCTGCAATTGAAGCGGCCAAGAGAGAAAATGATGAGCATGAGAAGTCTATTGAGGAACTTAGAACCAAGAATTTAAAACTCGTATATGCAATCAAGAAAACAGAGGAAGATAGCCGAAGGGACATGGAGGAACATTATTACGAGCGTCGAAGGAAATATGAAGAACTTTCATGCCGAGTATCGCAGTTGGAGAATGTAAGGACAGTTATTGAAAAAGGGGAGCCCATTGCTTCAAACAGAAACGAATTCAACCTCGAGAACCGAATAGGTACTGGAGGATCCTTTGTTGAGATAATTAGTGATGATGATCATGCCACCCGAGAAAATTTGTTTCGAGCGCATAGAAACCAGAAGAGAAGACGAGATTCATTGTTAAATGATTGTGAAGATTACCATGCGGAAAAGGAAGATGATCAGATGACCATTCTGCCTAATGTAAGCAAGGGTATGGAGTCATTGAAGAAAGTAGGGGCAATGTTTTCTGCACCTCCACGTGGTCGACCAAACAAACATGCCTCGAAAATGCAATTTTCTCCTAGGTCCAATGATTTCAAGAACATCACAACCTCTTCAAGGGCTGCTACAGTCATGCTGACGCAATGTGCAGAAGTTGGGGAAGGATGTAGATCACTTGATTCTAAGTTCAAGTATGCTTCATTTCGTATGGACTATTTCAATGACGACTATTTCATTTCGTCGGATTCTGATGGTGATATCCAAAATAGATATGGGTCAAGTCATTTAAAGTCAAAAGACCGGAGATGTAATAAAAAGTGGAACTTGGAGGCCGAAATGCTTGCTGCATTTGCTGAAAATGATGTGCTTTGCATGGAGGCTGTCTGTATACTTTATCGACAATCAAGTTTAATTGGAAAACCATACAATGCATCCACGCCTTCCAGGCATATAGGATTCGATGAGGCTGATTTGCTCAGGGGTTCCACATTGGCATTGTTTCTAACCAACCGAGATCCAAATGGGAAATTGAAGAAATCTGTGACAGAGTTGGAGAAATTTGACATAAGTGGTCTTATTGACTGCAGAAGAATCGCCATCCAACATTCGAAGCAGTTATTTGAAATATATAAGAACAACAAAGATCAATTCCATTTCCATTAA
BLAST of CSPI04G06200 vs. TrEMBL
Match: A0A0A0KYB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051390 PE=4 SV=1) HSP 1 Score: 1029.6 bits (2661), Expect = 1.3e-297 Identity = 535/538 (99.44%), Postives = 536/538 (99.63%), Query Frame = 1
BLAST of CSPI04G06200 vs. TrEMBL
Match: A0A067K0K5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20485 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 8.6e-26 Identity = 156/560 (27.86%), Postives = 248/560 (44.29%), Query Frame = 1
BLAST of CSPI04G06200 vs. TrEMBL
Match: D5A963_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 3.0e-23 Identity = 61/113 (53.98%), Postives = 76/113 (67.26%), Query Frame = 1
BLAST of CSPI04G06200 vs. TrEMBL
Match: A0A151TYH4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_004706 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 9.8e-22 Identity = 63/137 (45.99%), Postives = 85/137 (62.04%), Query Frame = 1
BLAST of CSPI04G06200 vs. TrEMBL
Match: A0A0D2T7R3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G270900 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 9.8e-22 Identity = 63/139 (45.32%), Postives = 84/139 (60.43%), Query Frame = 1
BLAST of CSPI04G06200 vs. TAIR10
Match: AT5G53220.1 (AT5G53220.1 unknown protein) HSP 1 Score: 106.7 bits (265), Expect = 4.6e-23 Identity = 86/287 (29.97%), Postives = 135/287 (47.04%), Query Frame = 1
BLAST of CSPI04G06200 vs. NCBI nr
Match: gi|778691009|ref|XP_011653209.1| (PREDICTED: TSA1-like protein [Cucumis sativus]) HSP 1 Score: 1041.2 bits (2691), Expect = 6.4e-301 Identity = 541/544 (99.45%), Postives = 542/544 (99.63%), Query Frame = 1
BLAST of CSPI04G06200 vs. NCBI nr
Match: gi|700198229|gb|KGN53387.1| (hypothetical protein Csa_4G051390 [Cucumis sativus]) HSP 1 Score: 1029.6 bits (2661), Expect = 1.9e-297 Identity = 535/538 (99.44%), Postives = 536/538 (99.63%), Query Frame = 1
BLAST of CSPI04G06200 vs. NCBI nr
Match: gi|659102136|ref|XP_008451970.1| (PREDICTED: intracellular protein transport protein USO1-like [Cucumis melo]) HSP 1 Score: 865.5 bits (2235), Expect = 4.8e-248 Identity = 475/596 (79.70%), Postives = 502/596 (84.23%), Query Frame = 1
BLAST of CSPI04G06200 vs. NCBI nr
Match: gi|659102134|ref|XP_008451969.1| (PREDICTED: myosin heavy chain, striated muscle-like [Cucumis melo]) HSP 1 Score: 295.8 bits (756), Expect = 1.5e-76 Identity = 180/252 (71.43%), Postives = 203/252 (80.56%), Query Frame = 1
BLAST of CSPI04G06200 vs. NCBI nr
Match: gi|802734940|ref|XP_012086762.1| (PREDICTED: girdin-like [Jatropha curcas]) HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25 Identity = 156/560 (27.86%), Postives = 248/560 (44.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |