CmoCh04G006840 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G006840
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUPF0497 membrane protein f16
LocationCmo_Chr04 : 3393409 .. 3395286 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAGCGATTCAGGAAAGCTAAGCAAGCTCCTTCAATGCTACCTCCCACTGCAACTCAACCACCACCATTAATGGACCATAAATCAACCGCAGATGATGAGCCTTATAATTGGACCAACCACATTACAAACCCAAACCCTCACCTTCCAATCTCTCCATATGGACGACAAATACAGCACTAATGGTGGAGCAGCGGCGGCCAGCTCGTCGGCTGTTGCCGATGAAAGCCTTAGCAGTAGTGGCATGCGGGTGGCGGACACGTTGCTCCGCCTTGCGTCGATGGGGCTCTGCGTGGCGGCGCTTATTGTGATGCTCAAGAACTCCCAGACTGACGACTATGGCTCTGTTGCTTACTCCGACCTTGGAGCTTTCAAGTATGTTTAAGAAAAACCAAAAAGGAAACCCCTTTTCGTCATTTTTTTAATCTATGGAGTTTTCTTTGTCTTTTTTCTATGAAGTCTTGTCGGATCTCAAATGGGTTTTTGAAAATTTTGGTTAATGATTTGGTTTTTAGCTTGTAGGACTTAAAATAGGTCTATTATACCAGTAGTATCAGAGTAATATCCTTAATTTAGTTATATTATAGAATTTTCGAGTATTTGAATAGATAAATTGTTGCGAGCCTTCAAGATGTAGGATTTGTTAGATTACTAATATACTCTCCAGAAAAGGAGTTGGTTTAGATGACACTAAATAGATAGATGACTATTTAAGAGGAGGATCAATAGTGTGACCCTGAGGAATCACGACTCTCCACAATGGTATGATATTGTTCACTTTGAGCATAAGCTCTCGTGGCTTTGCTTTGGGCTTCTGCAAATGGCCTCATAGCAATGGAGATAGTATTCATCCGTTATAAACCCTTGATCTTTCACTAAATTAACCTGTTTGACTCACTTCCAATAATCCTCAACAGTGACATCCCATGTCAGTCGATGAGGAGAATGAATAATTCTTTATAAGGGTGTGGAAATCTCTCCCACTAATTGTGTTTTATAAATTTTGAGAGCAAAGAGAATAATATCAGCTAGTGGTGGATTATGTTCGAGGAGCAGTGGACTATTATGGTTATAATAATGTTGGTAAGTAAATGTAGGTTTTTGGTGCATGTTAATGGAATATGTGCTGGGTACTCGTTCCTGTCGGCGGTGGTGGCGGCCATGTCGCGACCTTCAACCATGTCTAAGGCTTGGACTCTGTTCTTCTTGGATCAGGTTGGGTTGATATTAATAGAAAGTAGATAATAATTGAGATGAATCAAATTGTAATTCATTGTGTACCTCGCATCTCCATAGCTGCTGACCTACATAACCCTGGCGGCGGGGACGGTGTCGACGGAGGTGCTGTACTTGGCCTACAATGGGGACACTGAAATAACATGGAGTGCGGCATGTGGGTCGTTTGGGAAGTTCTGCAGCAAAGCCACGGCCTCGGTGGTGATCACCTTCGTTGTGGTTGCTTTCTATGCTTTCATTTCCATTCTGTCTTCTTACAAGCTGTTCGGTAGATACAGTGCTCCCATGCCGGATCCCTCCAAGCAACTTGAGATCTCTGCCTTCTCTGGGCGATGCTGAATTGTTTTTATACACTCATTGGGTTTAATGAACCATTTGTGAAGAGTGTGTCATGAACGATTGTATAAACTGTTTGTGCAAAACCAAAACTTTTATGGTCGTGTACTCAAGTTTAATAATTATAAACCCTTTGGTTTGGAACTTTTATTTGTTTATTGTCCATGATTCCATTTTTCCAAAATGGGTTTTAGTTATTCCCTTTGGAACTTAGTCGTTAGAGGTGCAAACGGCCTCAATTAACTATTTTGTGTAACCGTTCAAACCCACTGCTAGTACATGTTGTCCATTTTGACTTGTTACGTAT

mRNA sequence

AATAGCGATTCAGGAAAGCTAAGCAAGCTCCTTCAATGCTACCTCCCACTGCAACTCAACCACCACCATTAATGGACCATAAATCAACCGCAGATGATGAGCCTTATAATTGGACCAACCACATTACAAACCCAAACCCTCACCTTCCAATCTCTCCATATGGACGACAAATACAGCACTAATGGTGGAGCAGCGGCGGCCAGCTCGTCGGCTGTTGCCGATGAAAGCCTTAGCAGTAGTGGCATGCGGGTGGCGGACACGTTGCTCCGCCTTGCGTCGATGGGGCTCTGCGTGGCGGCGCTTATTGTGATGCTCAAGAACTCCCAGACTGACGACTATGGCTCTGTTGCTTACTCCGACCTTGGAGCTTTCAAGTTTTTGGTGCATGTTAATGGAATATGTGCTGGGTACTCGTTCCTGTCGGCGGTGGTGGCGGCCATGTCGCGACCTTCAACCATGTCTAAGGCTTGGACTCTGTTCTTCTTGGATCAGCTGCTGACCTACATAACCCTGGCGGCGGGGACGGTGTCGACGGAGGTGCTGTACTTGGCCTACAATGGGGACACTGAAATAACATGGAGTGCGGCATGTGGGTCGTTTGGGAAGTTCTGCAGCAAAGCCACGGCCTCGGTGGTGATCACCTTCGTTGTGGTTGCTTTCTATGCTTTCATTTCCATTCTGTCTTCTTACAAGCTGTTCGGTAGATACAGTGCTCCCATGCCGGATCCCTCCAAGCAACTTGAGATCTCTGCCTTCTCTGGGCGATGCTGAATTGTTTTTATACACTCATTGGGTTTAATGAACCATTTGTGAAGAGTGTGTCATGAACGATTGTATAAACTGTTTGTGCAAAACCAAAACTTTTATGGTCGTGTACTCAAGTTTAATAATTATAAACCCTTTGGTTTGGAACTTTTATTTGTTTATTGTCCATGATTCCATTTTTCCAAAATGGGTTTTAGTTATTCCCTTTGGAACTTAGTCGTTAGAGGTGCAAACGGCCTCAATTAACTATTTTGTGTAACCGTTCAAACCCACTGCTAGTACATGTTGTCCATTTTGACTTGTTACGTAT

Coding sequence (CDS)

ATGATGAGCCTTATAATTGGACCAACCACATTACAAACCCAAACCCTCACCTTCCAATCTCTCCATATGGACGACAAATACAGCACTAATGGTGGAGCAGCGGCGGCCAGCTCGTCGGCTGTTGCCGATGAAAGCCTTAGCAGTAGTGGCATGCGGGTGGCGGACACGTTGCTCCGCCTTGCGTCGATGGGGCTCTGCGTGGCGGCGCTTATTGTGATGCTCAAGAACTCCCAGACTGACGACTATGGCTCTGTTGCTTACTCCGACCTTGGAGCTTTCAAGTTTTTGGTGCATGTTAATGGAATATGTGCTGGGTACTCGTTCCTGTCGGCGGTGGTGGCGGCCATGTCGCGACCTTCAACCATGTCTAAGGCTTGGACTCTGTTCTTCTTGGATCAGCTGCTGACCTACATAACCCTGGCGGCGGGGACGGTGTCGACGGAGGTGCTGTACTTGGCCTACAATGGGGACACTGAAATAACATGGAGTGCGGCATGTGGGTCGTTTGGGAAGTTCTGCAGCAAAGCCACGGCCTCGGTGGTGATCACCTTCGTTGTGGTTGCTTTCTATGCTTTCATTTCCATTCTGTCTTCTTACAAGCTGTTCGGTAGATACAGTGCTCCCATGCCGGATCCCTCCAAGCAACTTGAGATCTCTGCCTTCTCTGGGCGATGCTGA
BLAST of CmoCh04G006840 vs. Swiss-Prot
Match: CSPLD_RICCO (CASP-like protein 2A1 OS=Ricinus communis GN=RCOM_0477780 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 7.7e-59
Identity = 114/180 (63.33%), Postives = 141/180 (78.33%), Query Frame = 1

Query: 43  DESLSSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHVNGI 102
           D+ L S  MR A+T+LRL  M  C++AL++MLKNSQT+D+G+++YSDLGAF++LVH NGI
Sbjct: 24  DDELESGSMRTAETVLRLVPMAFCISALVLMLKNSQTNDFGTLSYSDLGAFRYLVHANGI 83

Query: 103 CAGYSFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITW 162
           CAGYS LSA++ AM RPSTMS+AWT FFLDQ+LTY+ LAA  VS E LYLA  GD  ITW
Sbjct: 84  CAGYSLLSAIIVAMPRPSTMSRAWTFFFLDQVLTYVILAAAAVSVEALYLARKGDIAITW 143

Query: 163 SAACGSFGKFCSKATASVVITFVVVAFYAFISILSSYKLFGRYSAP-MPDPSKQLEISAF 222
           SAAC SFG FC KA  S VITF+VV  YA +S++SSYKLF RY AP +  P K +E++AF
Sbjct: 144 SAACVSFGGFCHKAITSAVITFIVVVCYALLSLVSSYKLFSRYGAPDVSYPGKGIEVAAF 203

BLAST of CmoCh04G006840 vs. Swiss-Prot
Match: CSPLA_POPTR (CASP-like protein 2A1 OS=Populus trichocarpa GN=POPTRDRAFT_834139 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-58
Identity = 117/173 (67.63%), Postives = 139/173 (80.35%), Query Frame = 1

Query: 52  RVADTLLRLASMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHVNGICAGYSFLSA 111
           R A+T+LRL  M LCV+AL+VMLKN+QT+DYGS++YSDLGAF++LVHVNGICAGYS LSA
Sbjct: 29  RTAETMLRLVPMALCVSALVVMLKNTQTNDYGSLSYSDLGAFRYLVHVNGICAGYSLLSA 88

Query: 112 VVAAMSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGK 171
           V+ AM R STM +AW  F LDQ+LTY+ LAAGTVSTEVLYLA  GDT ITWS AC SFG 
Sbjct: 89  VIVAMPRASTMPRAWAFFLLDQVLTYVILAAGTVSTEVLYLASKGDTTITWSEACVSFGG 148

Query: 172 FCSKATASVVITFVVVAFYAFISILSSYKLFGRYSAP-MPDPSKQLEISAFSG 224
           FC KA  S+VITFVVV  YA +S+LSSYKLF +Y +P +  P K +EI+ F G
Sbjct: 149 FCHKALISIVITFVVVICYAALSLLSSYKLFSKYDSPVLTYPGKGIEIATFHG 201

BLAST of CmoCh04G006840 vs. Swiss-Prot
Match: CSPLA_VITVI (CASP-like protein 2A1 OS=Vitis vinifera GN=VIT_01s0010g01870 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-58
Identity = 114/179 (63.69%), Postives = 139/179 (77.65%), Query Frame = 1

Query: 43  DESLSSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHVNGI 102
           DES + S MR  +TLLRL  + LC  +L+VMLKNSQT+D+GS++YSDLGAF++LVH NGI
Sbjct: 25  DESGNKSSMRTVETLLRLVPVALCTVSLVVMLKNSQTNDFGSLSYSDLGAFRYLVHANGI 84

Query: 103 CAGYSFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITW 162
           CAGYS LSA+  AM RP TMS+AWT F LDQ+LTY+ LAAG VSTEV+YLAY GD  +TW
Sbjct: 85  CAGYSLLSAIFTAMPRPPTMSRAWTFFLLDQVLTYLILAAGAVSTEVVYLAYKGDEAVTW 144

Query: 163 SAACGSFGKFCSKATASVVITFVVVAFYAFISILSSYKLFGRYSAPMPDPSKQLEISAF 222
           S AC SFG FC K TAS+ ITFV V  YA +S++SSYKLF +Y AP+    K +EI+AF
Sbjct: 145 SDACSSFGGFCQKTTASISITFVTVLCYAVLSLISSYKLFSKYDAPICFNGKGIEIAAF 203

BLAST of CmoCh04G006840 vs. Swiss-Prot
Match: CSPLA_SOYBN (CASP-like protein 2A2 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-58
Identity = 114/180 (63.33%), Postives = 142/180 (78.89%), Query Frame = 1

Query: 44  ESLSSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHVNGIC 103
           E  ++S +R A+T LRL  +GLCV+AL++MLK+SQ ++YGSV YSDLGAF++LVH NGIC
Sbjct: 27  EGNTTSALRTAETFLRLFPVGLCVSALVLMLKSSQQNEYGSVDYSDLGAFRYLVHANGIC 86

Query: 104 AGYSFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWS 163
           AGYS  SAV+AAM  PST+ +AWT F LDQ+LTYI LAAG VSTEVLYLA NGD   TWS
Sbjct: 87  AGYSLFSAVIAAMPCPSTIPRAWTFFLLDQVLTYIILAAGAVSTEVLYLAENGDAATTWS 146

Query: 164 AACGSFGKFCSKATASVVITFVVVAFYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSG 223
           +ACGSFG+FC K TASV ITFV V  Y  +S++SSYKLF +Y AP   P++ +E++AF G
Sbjct: 147 SACGSFGRFCHKVTASVAITFVAVFCYVLLSLVSSYKLFTKYDAPASRPTEAIEVAAFPG 206

BLAST of CmoCh04G006840 vs. Swiss-Prot
Match: CSPL1_GOSHI (CASP-like protein F16 OS=Gossypium hirsutum GN=F16 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.7e-56
Identity = 116/196 (59.18%), Postives = 149/196 (76.02%), Query Frame = 1

Query: 28  STNGGAAAASSSAVADESLSSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDYGSVAY 87
           +T    A   SS   ++ +++S MR A+T+LRL  M L VAAL+VMLKNSQ++D+GSV+Y
Sbjct: 13  ATRSPMALMGSSRNENQEVNTS-MRTAETMLRLVPMALGVAALVVMLKNSQSNDFGSVSY 72

Query: 88  SDLGAFKFLVHVNGICAGYSFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLAAGTVST 147
           SDLGAF++LVH NGICAGYS LSA++AA+  PSTM +AWT F LDQ+LTY+ L A  VST
Sbjct: 73  SDLGAFRYLVHANGICAGYSLLSAIIAAVPSPSTMPRAWTFFLLDQILTYVILGAAAVST 132

Query: 148 EVLYLAYNGDTEITWSAACGSFGKFCSKATASVVITFVVVAFYAFISILSSYKLFGRYSA 207
           EVLYLA  GD+ ITWSAACG+F  FC KAT +VVITFV V  YA +S++SSY+LF ++ A
Sbjct: 133 EVLYLANKGDSAITWSAACGTFAGFCHKATIAVVITFVAVICYAVLSLVSSYRLFTKFDA 192

Query: 208 PMPDPSKQLEISAFSG 224
           P+  PSK +E + F G
Sbjct: 193 PVNYPSKTIEATVFHG 207

BLAST of CmoCh04G006840 vs. TrEMBL
Match: A0A0A0KVC7_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_4G064080 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.0e-78
Identity = 159/203 (78.33%), Postives = 177/203 (87.19%), Query Frame = 1

Query: 23  MDDKYSTNGGAAAASSSAVADESLSSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDY 82
           MD+KY+ N     +SS    D+SL+++GMR ADTLLRL  MGLC+AALIVMLKNS+ +DY
Sbjct: 1   MDNKYTNNNPPGLSSSE---DDSLAATGMRAADTLLRLVPMGLCIAALIVMLKNSEANDY 60

Query: 83  GSVAYSDLGAFKFLVHVNGICAGYSFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLAA 142
           GSVAYSDLGAFKFLVH NGICAGYSFLSA VAAMS PST+SKAWTLFFLDQLLTY+TLAA
Sbjct: 61  GSVAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPPSTLSKAWTLFFLDQLLTYLTLAA 120

Query: 143 GTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATASVVITFVVVAFYAFISILSSYKLF 202
           GTVSTEVLYLAYNGD EITWSAACG+FGKFCSKATASVVITFVVVAFYAFISILSSYKLF
Sbjct: 121 GTVSTEVLYLAYNGDKEITWSAACGTFGKFCSKATASVVITFVVVAFYAFISILSSYKLF 180

Query: 203 GRYSAPMPDPS--KQLEISAFSG 224
            RY+AP+P P+  +QL+   F G
Sbjct: 181 SRYNAPLPHPNSKQQLQTPVFHG 200

BLAST of CmoCh04G006840 vs. TrEMBL
Match: V4VR20_9ROSI (CASP-like protein OS=Citrus clementina GN=CICLE_v10022266mg PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 7.1e-59
Identity = 125/207 (60.39%), Postives = 155/207 (74.88%), Query Frame = 1

Query: 25  DKYSTNGGAAAASS-----SAVADESLSSSG---MRVADTLLRLASMGLCVAALIVMLKN 84
           +K +  GGA AASS      + A + ++  G   +R A+ + RL  M LCVAAL++MLKN
Sbjct: 2   EKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLKN 61

Query: 85  SQTDDYGSVAYSDLGAFKFLVHVNGICAGYSFLSAVVAAMSRPSTMSKAWTLFFLDQLLT 144
           S+T D+GS++YSDLGAF++LVH NGICAGYS LSA++AAM RPSTMS+AWT FFLDQLLT
Sbjct: 62  SETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLT 121

Query: 145 YITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATASVVITFVVVAFYAFISIL 204
           Y+ LAAG VSTEVLYL   GD  ITWSA CGSFG FC KA ASV+ITFV VA Y  +S++
Sbjct: 122 YLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLI 181

Query: 205 SSYKLFGRYSAPMPDPSKQLEISAFSG 224
           SSYKLF +Y AP+    K +E++AF G
Sbjct: 182 SSYKLFSKYDAPIACSGKNIEVAAFHG 208

BLAST of CmoCh04G006840 vs. TrEMBL
Match: A0A067E5W9_CITSI (CASP-like protein OS=Citrus sinensis GN=CISIN_1g028477mg PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 7.1e-59
Identity = 125/207 (60.39%), Postives = 155/207 (74.88%), Query Frame = 1

Query: 25  DKYSTNGGAAAASS-----SAVADESLSSSG---MRVADTLLRLASMGLCVAALIVMLKN 84
           +K +  GGA AASS      + A + ++  G   +R A+ + RL  M LCVAAL++MLKN
Sbjct: 2   EKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLKN 61

Query: 85  SQTDDYGSVAYSDLGAFKFLVHVNGICAGYSFLSAVVAAMSRPSTMSKAWTLFFLDQLLT 144
           S+T D+GS++YSDLGAF++LVH NGICAGYS LSA++AAM RPSTMS+AWT FFLDQLLT
Sbjct: 62  SETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLT 121

Query: 145 YITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATASVVITFVVVAFYAFISIL 204
           Y+ LAAG VSTEVLYL   GD  ITWSA CGSFG FC KA ASV+ITFV VA Y  +S++
Sbjct: 122 YLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLI 181

Query: 205 SSYKLFGRYSAPMPDPSKQLEISAFSG 224
           SSYKLF +Y AP+    K +E++AF G
Sbjct: 182 SSYKLFSKYDAPIACSGKNIEVAAFHG 208

BLAST of CmoCh04G006840 vs. TrEMBL
Match: A0A0B2PHW7_GLYSO (CASP-like protein OS=Glycine soja GN=glysoja_032175 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.0e-57
Identity = 115/177 (64.97%), Postives = 140/177 (79.10%), Query Frame = 1

Query: 47  SSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHVNGICAGY 106
           ++S +R A+T LRL  +GLCV+AL++MLKNSQ ++YGSV YSDLGAF++LVH NGICAGY
Sbjct: 27  NTSALRTAETFLRLVPVGLCVSALVLMLKNSQQNEYGSVDYSDLGAFRYLVHANGICAGY 86

Query: 107 SFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAAC 166
           S  SAV+AAM RPSTM++AWT F LDQ+LTYI LAAG VSTEVLYLA  GD   TWS+AC
Sbjct: 87  SLFSAVIAAMPRPSTMTRAWTFFLLDQVLTYIILAAGAVSTEVLYLAEKGDAATTWSSAC 146

Query: 167 GSFGKFCSKATASVVITFVVVAFYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSG 224
           GSFG+FC K TASV ITFV V  Y  +S++SSYKLF  Y AP   P+  +E++AF G
Sbjct: 147 GSFGRFCHKVTASVAITFVAVFCYVLLSLISSYKLFTNYDAPASRPTAAIEVAAFPG 203

BLAST of CmoCh04G006840 vs. TrEMBL
Match: I1MZJ4_SOYBN (CASP-like protein OS=Glycine max GN=GLYMA_18G045300 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.7e-57
Identity = 115/177 (64.97%), Postives = 139/177 (78.53%), Query Frame = 1

Query: 47  SSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHVNGICAGY 106
           ++S +R A+T LRL  +GLCV+AL++MLKNSQ ++YGSV YSDLGAF++LVH NGICAGY
Sbjct: 27  NTSALRTAETFLRLVPVGLCVSALVLMLKNSQQNEYGSVDYSDLGAFRYLVHANGICAGY 86

Query: 107 SFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAAC 166
           S  SAV+AAM RPSTM +AWT F LDQ+LTYI LAAG VSTEVLYLA  GD   TWS+AC
Sbjct: 87  SLFSAVIAAMPRPSTMPRAWTFFLLDQVLTYIILAAGAVSTEVLYLAEKGDAATTWSSAC 146

Query: 167 GSFGKFCSKATASVVITFVVVAFYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSG 224
           GSFG+FC K TASV ITFV V  Y  +S++SSYKLF  Y AP   P+  +E++AF G
Sbjct: 147 GSFGRFCHKVTASVAITFVAVFCYVLLSLISSYKLFTNYDAPASRPTAAIEVAAFPG 203

BLAST of CmoCh04G006840 vs. TAIR10
Match: AT1G17200.1 (AT1G17200.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 218.8 bits (556), Expect = 3.5e-57
Identity = 116/200 (58.00%), Postives = 153/200 (76.50%), Query Frame = 1

Query: 24  DDKYSTNGGAAAASSSAVADESLSSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDYG 83
           D   +++GG+   ++    + SL   G+R A+T+LRLA +GLCVAAL+VMLK+S+T+++G
Sbjct: 6   DHDKASHGGSGGGATEKWEETSL---GIRTAETMLRLAPVGLCVAALVVMLKDSETNEFG 65

Query: 84  SVAYSDLGAFKFLVHVNGICAGYSFLSAVVAAMSRPS-TMSKAWTLFFLDQLLTYITLAA 143
           S++YS+L AF++LVH NGICAGYS LSA +AAM R S TM + WT F LDQLLTY+ LAA
Sbjct: 66  SISYSNLTAFRYLVHANGICAGYSLLSAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAA 125

Query: 144 GTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATASVVITFVVVAFYAFISILSSYKLF 203
           G VS EVLYLAYNGD+ ITWS AC S+G FC +ATASV+ITF VV FY  +S++SSYKLF
Sbjct: 126 GAVSAEVLYLAYNGDSAITWSDACSSYGGFCHRATASVIITFFVVCFYIVLSLISSYKLF 185

Query: 204 GRYSAP-MPDPSKQLEISAF 222
            R+  P + D +K LE++ F
Sbjct: 186 TRFDPPSIVDSAKNLEVAVF 202

BLAST of CmoCh04G006840 vs. TAIR10
Match: AT3G14380.1 (AT3G14380.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-39
Identity = 81/156 (51.92%), Postives = 114/156 (73.08%), Query Frame = 1

Query: 54  ADTLLRLASMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHVNGICAGYSFLSAV- 113
           A+ +LR+ASM L +  L++M+KNS ++++GSV+YS++GAF +LV  NG+CA YS LSA+ 
Sbjct: 23  AEAVLRVASMALSITGLVIMIKNSISNEFGSVSYSNIGAFMYLVSANGVCAAYSLLSALA 82

Query: 114 VAAMSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKF 173
           + A+  P +  +  TLF LDQ++TY+ LAAG VS E +YLAY G+  ITWS+AC S+G F
Sbjct: 83  ILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSYGSF 142

Query: 174 CSKATASVVITFVVVAFYAFISILSSYKLFGRYSAP 209
           C  A  SVV TFVV   Y  +S++SSY+LF R+ AP
Sbjct: 143 CHNALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

BLAST of CmoCh04G006840 vs. TAIR10
Match: AT5G54980.1 (AT5G54980.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20
Identity = 59/187 (31.55%), Postives = 107/187 (57.22%), Query Frame = 1

Query: 23  MDDKYSTNGGAAAASSSAVADESLSSSGMRVADTLLRLASMGLCVAALIVMLKNSQTD-D 82
           M D  + N      SSS+   +  +   +++ D+ LRL+ + L VA + + + N +++ D
Sbjct: 1   MRDNNNNNTREEERSSSSKQQQPQAPMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPD 60

Query: 83  YGSVAYSDLGAFKFLVHVNGICAGYSFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLA 142
           YG++ Y+ +   K++V V+ I A Y+ LS V + ++    +SKAW  F  DQ+L Y+   
Sbjct: 61  YGNLEYNSIMGLKYMVGVSAISAIYALLSTVSSWVT--CLVSKAWLFFIPDQVLAYVMTT 120

Query: 143 AGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATASVVITFVVVAFYAFISILSSYKL 202
           +   +TE++YL   GD  +TWS  C S+  +CSK T ++ +   V+ F+ F+S++S+Y+ 
Sbjct: 121 SVAGATEIVYLLNKGDKIVTWSEMCSSYPHYCSKLTIALGLHVFVLFFFLFLSVISAYRA 180

Query: 203 FGRYSAP 209
           F  +  P
Sbjct: 181 FSPFDPP 185

BLAST of CmoCh04G006840 vs. TAIR10
Match: AT5G06200.1 (AT5G06200.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 74.7 bits (182), Expect = 8.1e-14
Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 1

Query: 50  GMRVADTLLRLASMGLCVAALIVMLKNSQTDDYGS------VAYSDLGAFKFLVHVNGIC 109
           G+ + D LLRLA++   +AA   M  + +T  + +       +Y DL  F+F V    I 
Sbjct: 40  GLSIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIV 99

Query: 110 AGYSFLSAV--VAAMSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEIT 169
           AGY  LS    V  + RP  ++    L  LD     +  AA + +  ++YLA+NG+T   
Sbjct: 100 AGYLVLSLPFSVVTIVRPLAVAPRLLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTN 159

Query: 170 WSAACGSFGKFCSKATASVVITFVVVAFYAFISILSSYKL 202
           W   C  FG FC K + +VV  F  V F A + ++S   L
Sbjct: 160 WLPICQQFGDFCQKTSGAVVSAFASVTFLAILVVISGVSL 199

BLAST of CmoCh04G006840 vs. TAIR10
Match: AT3G11550.1 (AT3G11550.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 68.6 bits (166), Expect = 5.8e-12
Identity = 47/160 (29.38%), Postives = 79/160 (49.38%), Query Frame = 1

Query: 50  GMRVADTLLRLASMGLCVAALIVMLKNSQTDDYGS------VAYSDLGAFKFLVHVNGIC 109
           G+ + D LLRLA++   +AA   M  + +T  + +       +Y DL  F+F V    + 
Sbjct: 42  GLAIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALV 101

Query: 110 AGYSFLSAVVAAMS--RPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEIT 169
            GY  LS  ++ ++  RP   +    L  LD  +  +  AA + +  + YLA++G+    
Sbjct: 102 GGYLVLSLPISVVTILRPLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTN 161

Query: 170 WSAACGSFGKFCSKATASVVITFVVVAFYAFISILSSYKL 202
           W   C  FG FC K++ +VV  FV V F+  + ++S   L
Sbjct: 162 WLPICQQFGDFCQKSSGAVVSAFVSVVFFTILVVISGVAL 201

BLAST of CmoCh04G006840 vs. NCBI nr
Match: gi|659101839|ref|XP_008451819.1| (PREDICTED: CASP-like protein F16 [Cucumis melo])

HSP 1 Score: 301.6 bits (771), Expect = 1.1e-78
Identity = 159/203 (78.33%), Postives = 179/203 (88.18%), Query Frame = 1

Query: 23  MDDKYSTNGGAAAASSSAVADESLSSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDY 82
           MD+KY+ N     +SS    D+SL+++GMR ADTLLRL  MGLC+AALIVMLKNS+ +DY
Sbjct: 1   MDNKYTNNNPPGLSSS----DDSLAATGMRAADTLLRLVPMGLCIAALIVMLKNSEANDY 60

Query: 83  GSVAYSDLGAFKFLVHVNGICAGYSFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLAA 142
           GSVAYSDLGAFKFLVH NGICAGYSFLSA VAAMS PST+SKAWTLFFLDQLLTY+TLAA
Sbjct: 61  GSVAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPPSTISKAWTLFFLDQLLTYLTLAA 120

Query: 143 GTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATASVVITFVVVAFYAFISILSSYKLF 202
           GTVSTEVLYLAYNGDTEITWSAACG+FGKFCSKATASVVITF+VVAFYAFISILSSYKLF
Sbjct: 121 GTVSTEVLYLAYNGDTEITWSAACGTFGKFCSKATASVVITFIVVAFYAFISILSSYKLF 180

Query: 203 GRYSAPMPDPS--KQLEISAFSG 224
            RY+AP+P P+  +QL++  F G
Sbjct: 181 SRYNAPLPHPNSKQQLQMPVFHG 199

BLAST of CmoCh04G006840 vs. NCBI nr
Match: gi|449460050|ref|XP_004147759.1| (PREDICTED: CASP-like protein F16 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 4.4e-78
Identity = 159/203 (78.33%), Postives = 177/203 (87.19%), Query Frame = 1

Query: 23  MDDKYSTNGGAAAASSSAVADESLSSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDY 82
           MD+KY+ N     +SS    D+SL+++GMR ADTLLRL  MGLC+AALIVMLKNS+ +DY
Sbjct: 1   MDNKYTNNNPPGLSSSE---DDSLAATGMRAADTLLRLVPMGLCIAALIVMLKNSEANDY 60

Query: 83  GSVAYSDLGAFKFLVHVNGICAGYSFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLAA 142
           GSVAYSDLGAFKFLVH NGICAGYSFLSA VAAMS PST+SKAWTLFFLDQLLTY+TLAA
Sbjct: 61  GSVAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPPSTLSKAWTLFFLDQLLTYLTLAA 120

Query: 143 GTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATASVVITFVVVAFYAFISILSSYKLF 202
           GTVSTEVLYLAYNGD EITWSAACG+FGKFCSKATASVVITFVVVAFYAFISILSSYKLF
Sbjct: 121 GTVSTEVLYLAYNGDKEITWSAACGTFGKFCSKATASVVITFVVVAFYAFISILSSYKLF 180

Query: 203 GRYSAPMPDPS--KQLEISAFSG 224
            RY+AP+P P+  +QL+   F G
Sbjct: 181 SRYNAPLPHPNSKQQLQTPVFHG 200

BLAST of CmoCh04G006840 vs. NCBI nr
Match: gi|567899472|ref|XP_006442224.1| (hypothetical protein CICLE_v10022266mg [Citrus clementina])

HSP 1 Score: 235.3 bits (599), Expect = 1.0e-58
Identity = 125/207 (60.39%), Postives = 155/207 (74.88%), Query Frame = 1

Query: 25  DKYSTNGGAAAASS-----SAVADESLSSSG---MRVADTLLRLASMGLCVAALIVMLKN 84
           +K +  GGA AASS      + A + ++  G   +R A+ + RL  M LCVAAL++MLKN
Sbjct: 2   EKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLKN 61

Query: 85  SQTDDYGSVAYSDLGAFKFLVHVNGICAGYSFLSAVVAAMSRPSTMSKAWTLFFLDQLLT 144
           S+T D+GS++YSDLGAF++LVH NGICAGYS LSA++AAM RPSTMS+AWT FFLDQLLT
Sbjct: 62  SETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLT 121

Query: 145 YITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATASVVITFVVVAFYAFISIL 204
           Y+ LAAG VSTEVLYL   GD  ITWSA CGSFG FC KA ASV+ITFV VA Y  +S++
Sbjct: 122 YLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLI 181

Query: 205 SSYKLFGRYSAPMPDPSKQLEISAFSG 224
           SSYKLF +Y AP+    K +E++AF G
Sbjct: 182 SSYKLFSKYDAPIACSGKNIEVAAFHG 208

BLAST of CmoCh04G006840 vs. NCBI nr
Match: gi|734338385|gb|KHN08760.1| (CASP-like protein 10 [Glycine soja])

HSP 1 Score: 231.5 bits (589), Expect = 1.5e-57
Identity = 115/177 (64.97%), Postives = 140/177 (79.10%), Query Frame = 1

Query: 47  SSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHVNGICAGY 106
           ++S +R A+T LRL  +GLCV+AL++MLKNSQ ++YGSV YSDLGAF++LVH NGICAGY
Sbjct: 27  NTSALRTAETFLRLVPVGLCVSALVLMLKNSQQNEYGSVDYSDLGAFRYLVHANGICAGY 86

Query: 107 SFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAAC 166
           S  SAV+AAM RPSTM++AWT F LDQ+LTYI LAAG VSTEVLYLA  GD   TWS+AC
Sbjct: 87  SLFSAVIAAMPRPSTMTRAWTFFLLDQVLTYIILAAGAVSTEVLYLAEKGDAATTWSSAC 146

Query: 167 GSFGKFCSKATASVVITFVVVAFYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSG 224
           GSFG+FC K TASV ITFV V  Y  +S++SSYKLF  Y AP   P+  +E++AF G
Sbjct: 147 GSFGRFCHKVTASVAITFVAVFCYVLLSLISSYKLFTNYDAPASRPTAAIEVAAFPG 203

BLAST of CmoCh04G006840 vs. NCBI nr
Match: gi|356569822|ref|XP_003553094.1| (PREDICTED: CASP-like protein 2A2 [Glycine max])

HSP 1 Score: 230.7 bits (587), Expect = 2.5e-57
Identity = 115/177 (64.97%), Postives = 139/177 (78.53%), Query Frame = 1

Query: 47  SSSGMRVADTLLRLASMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHVNGICAGY 106
           ++S +R A+T LRL  +GLCV+AL++MLKNSQ ++YGSV YSDLGAF++LVH NGICAGY
Sbjct: 27  NTSALRTAETFLRLVPVGLCVSALVLMLKNSQQNEYGSVDYSDLGAFRYLVHANGICAGY 86

Query: 107 SFLSAVVAAMSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAAC 166
           S  SAV+AAM RPSTM +AWT F LDQ+LTYI LAAG VSTEVLYLA  GD   TWS+AC
Sbjct: 87  SLFSAVIAAMPRPSTMPRAWTFFLLDQVLTYIILAAGAVSTEVLYLAEKGDAATTWSSAC 146

Query: 167 GSFGKFCSKATASVVITFVVVAFYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSG 224
           GSFG+FC K TASV ITFV V  Y  +S++SSYKLF  Y AP   P+  +E++AF G
Sbjct: 147 GSFGRFCHKVTASVAITFVAVFCYVLLSLISSYKLFTNYDAPASRPTAAIEVAAFPG 203

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CSPLD_RICCO7.7e-5963.33CASP-like protein 2A1 OS=Ricinus communis GN=RCOM_0477780 PE=2 SV=1[more]
CSPLA_POPTR1.3e-5867.63CASP-like protein 2A1 OS=Populus trichocarpa GN=POPTRDRAFT_834139 PE=3 SV=1[more]
CSPLA_VITVI1.3e-5863.69CASP-like protein 2A1 OS=Vitis vinifera GN=VIT_01s0010g01870 PE=2 SV=1[more]
CSPLA_SOYBN1.7e-5863.33CASP-like protein 2A2 OS=Glycine max PE=2 SV=1[more]
CSPL1_GOSHI4.7e-5659.18CASP-like protein F16 OS=Gossypium hirsutum GN=F16 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KVC7_CUCSA3.0e-7878.33CASP-like protein OS=Cucumis sativus GN=Csa_4G064080 PE=3 SV=1[more]
V4VR20_9ROSI7.1e-5960.39CASP-like protein OS=Citrus clementina GN=CICLE_v10022266mg PE=3 SV=1[more]
A0A067E5W9_CITSI7.1e-5960.39CASP-like protein OS=Citrus sinensis GN=CISIN_1g028477mg PE=3 SV=1[more]
A0A0B2PHW7_GLYSO1.0e-5764.97CASP-like protein OS=Glycine soja GN=glysoja_032175 PE=3 SV=1[more]
I1MZJ4_SOYBN1.7e-5764.97CASP-like protein OS=Glycine max GN=GLYMA_18G045300 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G17200.13.5e-5758.00 Uncharacterised protein family (UPF0497)[more]
AT3G14380.11.5e-3951.92 Uncharacterised protein family (UPF0497)[more]
AT5G54980.11.2e-2031.55 Uncharacterised protein family (UPF0497)[more]
AT5G06200.18.1e-1432.50 Uncharacterised protein family (UPF0497)[more]
AT3G11550.15.8e-1229.38 Uncharacterised protein family (UPF0497)[more]
Match NameE-valueIdentityDescription
gi|659101839|ref|XP_008451819.1|1.1e-7878.33PREDICTED: CASP-like protein F16 [Cucumis melo][more]
gi|449460050|ref|XP_004147759.1|4.4e-7878.33PREDICTED: CASP-like protein F16 [Cucumis sativus][more]
gi|567899472|ref|XP_006442224.1|1.0e-5860.39hypothetical protein CICLE_v10022266mg [Citrus clementina][more]
gi|734338385|gb|KHN08760.1|1.5e-5764.97CASP-like protein 10 [Glycine soja][more]
gi|356569822|ref|XP_003553094.1|2.5e-5764.97PREDICTED: CASP-like protein 2A2 [Glycine max][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006459CASP/CASPL
IPR006702CASP_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0080167 response to karrikin
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G006840.1CmoCh04G006840.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006459Casparian strip membrane proteinTIGRFAMsTIGR01569TIGR01569coord: 58..200
score: 9.7
IPR006702Domain of unknown function DUF588PFAMPF04535DUF588coord: 49..188
score: 4.8
NoneNo IPR availablePANTHERPTHR11615NITRATE, FROMATE, IRON DEHYDROGENASEcoord: 47..210
score: 1.1
NoneNo IPR availablePANTHERPTHR11615:SF151SUBFAMILY NOT NAMEDcoord: 47..210
score: 1.1