Cla005414 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla005414
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	CASP-like protein POPTRDRAFT_834139 (AHRD V1 ***- CSPLA_POPTR); contains Interpro domain(s) IPR006459 Uncharacterised protein family UPF0497, trans-membrane plant subgroup
Location	Chr7 : 27880257 .. 27882868 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGTAATAACAAATACACCAATAATGGTATGACATCTCCGCCCCTAACCTCCTCCGACCACACCCTCGCCGCCACCGGCATGCGGGCAGCCGACACCTTGCTCCGCCTTGTCCCGATGGGCCTCTGCGTCGCTGCGCTTATTGTCATGCTCAAGAACTCTCAGATCGACGACTATGGCTCTGTCGCTTACTCCGACCTCGGAGCTTTCAAGTATGTAATTTTTTTAAATATATACGTGCAAAGAAAAAAGAAGAGTTTTTTTTTTTCTTCTTCCTTTTTGGCTTTTCTTTATGGATTCTGTGAGATCTGAATTTTTTTTTTTTTAACGAATAACTATTTTGTTTTTATTTTTGAAATTTGGATTTGTTTTATTAGAATCATGGTTTGCTTGCTAACTAAATAACTTTATTTTTTCCAAAATTTTGATTGATTTTTTAGAACACTTATAACAAAAATAAAGACAATCAATAGATGGAAGGGGAGGGTGGGTTTCGTTTGATAATTTTTTTTTTAATTATTATTATTTCTAATCACTTCTCTTTTTTAAGTCTTTCACTCTTCTTTTTTTTTTAATCATTTGATCTTTTATTTTTTATTTTTTATTTTTTAAAATTAAGTCTATGAACATTTTTTCTACCTCTCAATTTCTTGATTTGTTTTCTACCTTTTACCAAAAATAAGCCAAATTTTAAAAGAAAAAAAATTAATTTTAAAAATAAATTTTTGATTTTGAAATTTAACTAAGAATTAAATGTTGTTACTTAAAAAAGATTCAAAATATCTTAAGAAATAAGAAGGAAATAGTAAGAAAGATTTAAAAACAAAGAAACAATTACCTATCTTGATTTCTTAAAATATGTAGAAGTAGTATGTTGGTAAGTTTAATTAATTTTCAAAATAAATTAAGAAAATTTTAGCTTGTTTGATAAATATTTAGATTGGGTCATCCATTTTGATAGCTATTTGATTTTTAATTTTTAGTGGTTGAAAATTAAGTTTAGAAATACAAATTTCACTTTAAAATTTCAACCATTAATTTTAAAAAAATAAAGCCAAAGTAGGGTTTAAATTTTTTTTTTTTTAAATTTGATTTAGAATTTAACTCTTTTACTTAAAATAAATAAATAAAAAAAATAAATATGCTAGGATTTTAAAAACAAAAAAGTAAAATAGTTATCCGGCCTAGTTTCTTTGTTTTCTATTTTTCCTTTTTAAAATCTGTTTGCATGAACATATAAATTCTTATGTTGGAAAATGACTGTAGGTTTTTGGTGCATGCTAATGGGATATGTGCTGGCTACTCGTTTTTGTCGGCGGCGGTGGCGGCCATGTCTCCGGCTTCTACCATTTCTAAAGCTTGGACTCTCTTCTTCCTCGATCAGGTTTAATCTCCCTTCTAATTCTTTTTTGGATATTAATATATTGGAACATATAGATAATATCCTTAATTAAGTAGTTTTCATGATAAGATTTTTCATCATTTATATGGGTTAGTACTGTTTAAGTTTAAATACCACTACCTTGGTTGCTGCACTCTCAATTTTAGTTCCATTTTTCTTTTTGATATTTAGACTTTCAAAAATAGTTCATTCTAGTATCTATGTTTTTAAAATGTTCATTTTAATCTCTATATTTTAAAAAGCGATTATTTTGGTGCCTTTATTTTCATTTTTATTTTATTTTAAATGGACCAAAATGATCACTTTTTAAAAATACATAGACTAAAATAAATAAAAGTTAAGAGTACTAATATCAAGATGAATATTTTGAAAGTAAAGGAAACCAAAAATTAAGAGTACAACGACTAAAACAAACATTTTATAATAGAAGAACCAAAATAAACTAGAATTATGAAGTGATACTTAGAAAATATAATTATTAAAATTATTTAAAGAATCAAAATTACAACGATAAAAGTAGTATTTAAAATTTTTTTTTATTATTATTATTACTCTATCCTAATGGAAGGTTTATGAACTCATAATTGAGATAAGTATTAAAAGTATTTGAAATAAATTATATTTACGTTAACTCATTTGCTTATGTAATATGGTATTTAGAGCAGAAGTGATAAAATAGTATGAATATAGTTAAATTTAATTATCTTAACCCATCAACTTAATATTTAAACTTCATACTCAAGGTGATGAACCTACTTGTTTAGGTGTTTTATAAAATTTTCAAAGTCAGAAGTACAGAAGGCCATTAAATCATTGTTATGATTACATTTACTATGCATTAGATCAAATATTGTATATCTATTAAATAGTTGAAATATAATAACAAAATATCTGACGAATAGAGTTTTTGTTTGATTACCTTGGATCTCGGTAGCTGTTGACGTACCTAACCCTAGCGGCGGGGACGGTGTCGACGGAGGTGTTGTACCTAGCCTACAATGGTGACACTGAAATAACTTGGAGTTCAGCCTGTGGGACATTTGGGAAATTCTGCACCAAAGCTACAACTTCAGTTGTCATCACCTTTGTTGTAGTTGCTTTCTATGCTTTCATTTCCATTTTATCTTCTTACAAACTCTTTAGTAGGTATAATGCTCCACTGCCTGATCCTTCCAAGCAACTTCAGATTCCAGCTTTCCATGGCTAG

mRNA sequence

ATGGACAGTAATAACAAATACACCAATAATGGTATGACATCTCCGCCCCTAACCTCCTCCGACCACACCCTCGCCGCCACCGGCATGCGGGCAGCCGACACCTTGCTCCGCCTTGTCCCGATGGGCCTCTGCGTCGCTGCGCTTATTGTCATGCTCAAGAACTCTCAGATCGACGACTATGGCTCTGTCGCTTACTCCGACCTCGGAGCTTTCAAGTTTTTGGTGCATGCTAATGGGATATGTGCTGGCTACTCGTTTTTGTCGGCGGCGGTGGCGGCCATGTCTCCGGCTTCTACCATTTCTAAAGCTTGGACTCTCTTCTTCCTCGATCAGCTGTTGACGTACCTAACCCTAGCGGCGGGGACGGTGTCGACGGAGGTGTTGTACCTAGCCTACAATGGTGACACTGAAATAACTTGGAGTTCAGCCTGTGGGACATTTGGGAAATTCTGCACCAAAGCTACAACTTCAGTTGTCATCACCTTTGTTGTAGTTGCTTTCTATGCTTTCATTTCCATTTTATCTTCTTACAAACTCTTTAGTAGGTATAATGCTCCACTGCCTGATCCTTCCAAGCAACTTCAGATTCCAGCTTTCCATGGCTAG

Coding sequence (CDS)

ATGGACAGTAATAACAAATACACCAATAATGGTATGACATCTCCGCCCCTAACCTCCTCCGACCACACCCTCGCCGCCACCGGCATGCGGGCAGCCGACACCTTGCTCCGCCTTGTCCCGATGGGCCTCTGCGTCGCTGCGCTTATTGTCATGCTCAAGAACTCTCAGATCGACGACTATGGCTCTGTCGCTTACTCCGACCTCGGAGCTTTCAAGTTTTTGGTGCATGCTAATGGGATATGTGCTGGCTACTCGTTTTTGTCGGCGGCGGTGGCGGCCATGTCTCCGGCTTCTACCATTTCTAAAGCTTGGACTCTCTTCTTCCTCGATCAGCTGTTGACGTACCTAACCCTAGCGGCGGGGACGGTGTCGACGGAGGTGTTGTACCTAGCCTACAATGGTGACACTGAAATAACTTGGAGTTCAGCCTGTGGGACATTTGGGAAATTCTGCACCAAAGCTACAACTTCAGTTGTCATCACCTTTGTTGTAGTTGCTTTCTATGCTTTCATTTCCATTTTATCTTCTTACAAACTCTTTAGTAGGTATAATGCTCCACTGCCTGATCCTTCCAAGCAACTTCAGATTCCAGCTTTCCATGGCTAG

Protein sequence

MDSNNKYTNNGMTSPPLTSSDHTLAATGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSRYNAPLPDPSKQLQIPAFHG

Homology

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BLAST of Cla005414 vs. Swiss-Prot
Match: CSPLA_POPTR (CASP-like protein 2A1 OS=Populus trichocarpa GN=POPTRDRAFT_834139 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.3e-61
Identity = 116/173 (67.05%), Postives = 138/173 (79.77%), Query Frame = 1


Query: 30  RAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSVAYSDLGAFKFLVHANGICAGYSFLSA 89
           R A+T+LRLVPM LCV+AL+VMLKN+Q +DYGS++YSDLGAF++LVH NGICAGYS LSA
Sbjct: 29  RTAETMLRLVPMALCVSALVVMLKNTQTNDYGSLSYSDLGAFRYLVHVNGICAGYSLLSA 88

Query: 90  AVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGK 149
            + AM  AST+ +AW  F LDQ+LTY+ LAAGTVSTEVLYLA  GDT ITWS AC +FG 
Sbjct: 89  VIVAMPRASTMPRAWAFFLLDQVLTYVILAAGTVSTEVLYLASKGDTTITWSEACVSFGG 148

Query: 150 FCTKATTSVVITFVVVAFYAFISILSSYKLFSRYNAP-LPDPSKQLQIPAFHG 202
           FC KA  S+VITFVVV  YA +S+LSSYKLFS+Y++P L  P K ++I  FHG
Sbjct: 149 FCHKALISIVITFVVVICYAALSLLSSYKLFSKYDSPVLTYPGKGIEIATFHG 201

[Close]

BLAST of Cla005414 vs. Swiss-Prot
Match: CSPL1_GOSHI (CASP-like protein F16 OS=Gossypium hirsutum GN=F16 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.6e-60
Identity = 113/175 (64.57%), Postives = 139/175 (79.43%), Query Frame = 1


Query: 27  TGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSVAYSDLGAFKFLVHANGICAGYSF 86
           T MR A+T+LRLVPM L VAAL+VMLKNSQ +D+GSV+YSDLGAF++LVHANGICAGYS 
Sbjct: 33  TSMRTAETMLRLVPMALGVAALVVMLKNSQSNDFGSVSYSDLGAFRYLVHANGICAGYSL 92

Query: 87  LSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGT 146
           LSA +AA+   ST+ +AWT F LDQ+LTY+ L A  VSTEVLYLA  GD+ ITWS+ACGT
Sbjct: 93  LSAIIAAVPSPSTMPRAWTFFLLDQILTYVILGAAAVSTEVLYLANKGDSAITWSAACGT 152

Query: 147 FGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSRYNAPLPDPSKQLQIPAFHG 202
           F  FC KAT +VVITFV V  YA +S++SSY+LF++++AP+  PSK ++   FHG
Sbjct: 153 FAGFCHKATIAVVITFVAVICYAVLSLVSSYRLFTKFDAPVNYPSKTIEATVFHG 207

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BLAST of Cla005414 vs. Swiss-Prot
Match: CSPLA_SOYBN (CASP-like protein 2A2 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.2e-60
Identity = 113/184 (61.41%), Postives = 140/184 (76.09%), Query Frame = 1


Query: 21  DHTL---AATGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSVAYSDLGAFKFLVHA 80
           DH L     + +R A+T LRL P+GLCV+AL++MLK+SQ ++YGSV YSDLGAF++LVHA
Sbjct: 23  DHELEGNTTSALRTAETFLRLFPVGLCVSALVLMLKSSQQNEYGSVDYSDLGAFRYLVHA 82

Query: 81  NGICAGYSFLSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTE 140
           NGICAGYS  SA +AAM   STI +AWT F LDQ+LTY+ LAAG VSTEVLYLA NGD  
Sbjct: 83  NGICAGYSLFSAVIAAMPCPSTIPRAWTFFLLDQVLTYIILAAGAVSTEVLYLAENGDAA 142

Query: 141 ITWSSACGTFGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSRYNAPLPDPSKQLQIP 200
            TWSSACG+FG+FC K T SV ITFV V  Y  +S++SSYKLF++Y+AP   P++ +++ 
Sbjct: 143 TTWSSACGSFGRFCHKVTASVAITFVAVFCYVLLSLVSSYKLFTKYDAPASRPTEAIEVA 202

Query: 201 AFHG 202
           AF G
Sbjct: 203 AFPG 206

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BLAST of Cla005414 vs. Swiss-Prot
Match: CSPLD_RICCO (CASP-like protein 2A1 OS=Ricinus communis GN=RCOM_0477780 PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.8e-60
Identity = 113/183 (61.75%), Postives = 141/183 (77.05%), Query Frame = 1


Query: 19  SSDHTLAATGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSVAYSDLGAFKFLVHAN 78
           S D  L +  MR A+T+LRLVPM  C++AL++MLKNSQ +D+G+++YSDLGAF++LVHAN
Sbjct: 22  SRDDELESGSMRTAETVLRLVPMAFCISALVLMLKNSQTNDFGTLSYSDLGAFRYLVHAN 81

Query: 79  GICAGYSFLSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEI 138
           GICAGYS LSA + AM   ST+S+AWT FFLDQ+LTY+ LAA  VS E LYLA  GD  I
Sbjct: 82  GICAGYSLLSAIIVAMPRPSTMSRAWTFFFLDQVLTYVILAAAAVSVEALYLARKGDIAI 141

Query: 139 TWSSACGTFGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSRYNAP-LPDPSKQLQIP 198
           TWS+AC +FG FC KA TS VITF+VV  YA +S++SSYKLFSRY AP +  P K +++ 
Sbjct: 142 TWSAACVSFGGFCHKAITSAVITFIVVVCYALLSLVSSYKLFSRYGAPDVSYPGKGIEVA 201

Query: 199 AFH 201
           AFH
Sbjct: 202 AFH 204

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BLAST of Cla005414 vs. Swiss-Prot
Match: CSPLA_VITVI (CASP-like protein 2A1 OS=Vitis vinifera GN=VIT_01s0010g01870 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.1e-59
Identity = 109/174 (62.64%), Postives = 133/174 (76.44%), Query Frame = 1


Query: 27  TGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSVAYSDLGAFKFLVHANGICAGYSF 86
           + MR  +TLLRLVP+ LC  +L+VMLKNSQ +D+GS++YSDLGAF++LVHANGICAGYS 
Sbjct: 31  SSMRTVETLLRLVPVALCTVSLVVMLKNSQTNDFGSLSYSDLGAFRYLVHANGICAGYSL 90

Query: 87  LSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGT 146
           LSA   AM    T+S+AWT F LDQ+LTYL LAAG VSTEV+YLAY GD  +TWS AC +
Sbjct: 91  LSAIFTAMPRPPTMSRAWTFFLLDQVLTYLILAAGAVSTEVVYLAYKGDEAVTWSDACSS 150

Query: 147 FGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSRYNAPLPDPSKQLQIPAFH 201
           FG FC K T S+ ITFV V  YA +S++SSYKLFS+Y+AP+    K ++I AFH
Sbjct: 151 FGGFCQKTTASISITFVTVLCYAVLSLISSYKLFSKYDAPICFNGKGIEIAAFH 204

[Close]

BLAST of Cla005414 vs. TrEMBL
Match: A0A0A0KVC7_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_4G064080 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.6e-89
Identity = 174/201 (86.57%), Postives = 185/201 (92.04%), Query Frame = 1


Query: 4   NNKYTNNGMTSPPLTSS-DHTLAATGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGS 63
           +NKYTNN    P L+SS D +LAATGMRAADTLLRLVPMGLC+AALIVMLKNS+ +DYGS
Sbjct: 2   DNKYTNNN--PPGLSSSEDDSLAATGMRAADTLLRLVPMGLCIAALIVMLKNSEANDYGS 61

Query: 64  VAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGT 123
           VAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSP ST+SKAWTLFFLDQLLTYLTLAAGT
Sbjct: 62  VAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPPSTLSKAWTLFFLDQLLTYLTLAAGT 121

Query: 124 VSTEVLYLAYNGDTEITWSSACGTFGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSR 183
           VSTEVLYLAYNGD EITWS+ACGTFGKFC+KAT SVVITFVVVAFYAFISILSSYKLFSR
Sbjct: 122 VSTEVLYLAYNGDKEITWSAACGTFGKFCSKATASVVITFVVVAFYAFISILSSYKLFSR 181

Query: 184 YNAPLPDPS--KQLQIPAFHG 202
           YNAPLP P+  +QLQ P FHG
Sbjct: 182 YNAPLPHPNSKQQLQTPVFHG 200

[Close]

BLAST of Cla005414 vs. TrEMBL
Match: A0A0K9QF81_SPIOL (CASP-like protein OS=Spinacia oleracea GN=SOVF_185150 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.3e-60
Identity = 119/200 (59.50%), Postives = 149/200 (74.50%), Query Frame = 1


Query: 3   SNNKYTNNGMTSPPLTSSDHTLAATGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGS 62
           +  K   N + S     +D +   T MR A+TL RL PMGLCV ALIVMLKN++ +DYGS
Sbjct: 2   AEKKQKGNVVVSERAAVNDESGRTTSMRTAETLFRLFPMGLCVTALIVMLKNTETNDYGS 61

Query: 63  VAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGT 122
           ++Y+DLGAFK+LVHANGICAGYS LSA   A+    TIS+AWT F LDQ+LTY+ LAAG 
Sbjct: 62  LSYTDLGAFKYLVHANGICAGYSLLSAVFTAVPRPPTISRAWTFFLLDQVLTYVILAAGA 121

Query: 123 VSTEVLYLAYNGDTEITWSSACGTFGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSR 182
           VSTEV+YLAY GDT ITWS+ACGTFG FC KATTSV++TF V+  YA +S++SSY+LFSR
Sbjct: 122 VSTEVVYLAYKGDTAITWSAACGTFGAFCHKATTSVILTFGVMLCYAALSLISSYRLFSR 181

Query: 183 YNAP--LPDPSKQLQIPAFH 201
           ++ P    D +K  ++ AFH
Sbjct: 182 FDPPSATHDANKAAEMAAFH 201

[Close]

BLAST of Cla005414 vs. TrEMBL
Match: A0A061F9N7_THECC (CASP-like protein OS=Theobroma cacao GN=TCM_032366 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-60
Identity = 113/163 (69.33%), Postives = 138/163 (84.66%), Query Frame = 1


Query: 25  AATGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSVAYSDLGAFKFLVHANGICAGY 84
           A TGMR  +T+LRLVPM LC+AAL+VMLKNSQ +++GSV+YSDLGAF++LVHANGICAGY
Sbjct: 35  ANTGMRTTETMLRLVPMALCIAALVVMLKNSQSNEFGSVSYSDLGAFRYLVHANGICAGY 94

Query: 85  SFLSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEITWSSAC 144
           S LSA +AAM   ST+ +AWTLF LDQ+LTY+ LAAG VSTEVLYL   GD  +TWS+AC
Sbjct: 95  SLLSAIIAAMPRPSTMPRAWTLFLLDQILTYIILAAGAVSTEVLYLTNKGDAAVTWSAAC 154

Query: 145 GTFGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSRYNAPL 188
           GTF  FC KATTSV+ITFVVVA Y  +S++SSY+LFS+Y+AP+
Sbjct: 155 GTFASFCHKATTSVIITFVVVACYVVLSLISSYRLFSKYDAPV 197

[Close]

BLAST of Cla005414 vs. TrEMBL
Match: A0A067E5W9_CITSI (CASP-like protein OS=Citrus sinensis GN=CISIN_1g028477mg PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.7e-60
Identity = 113/173 (65.32%), Postives = 139/173 (80.35%), Query Frame = 1


Query: 29  MRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSVAYSDLGAFKFLVHANGICAGYSFLS 88
           +R A+ + RLVPM LCVAAL++MLKNS+  D+GS++YSDLGAF++LVHANGICAGYS LS
Sbjct: 36  LRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLS 95

Query: 89  AAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFG 148
           A +AAM   ST+S+AWT FFLDQLLTYL LAAG VSTEVLYL   GD  ITWS+ CG+FG
Sbjct: 96  AIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFG 155

Query: 149 KFCTKATTSVVITFVVVAFYAFISILSSYKLFSRYNAPLPDPSKQLQIPAFHG 202
            FC KA  SV+ITFV VA Y  +S++SSYKLFS+Y+AP+    K +++ AFHG
Sbjct: 156 GFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIEVAAFHG 208

[Close]

BLAST of Cla005414 vs. TrEMBL
Match: V4VR20_9ROSI (CASP-like protein OS=Citrus clementina GN=CICLE_v10022266mg PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.7e-60
Identity = 113/173 (65.32%), Postives = 139/173 (80.35%), Query Frame = 1


Query: 29  MRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSVAYSDLGAFKFLVHANGICAGYSFLS 88
           +R A+ + RLVPM LCVAAL++MLKNS+  D+GS++YSDLGAF++LVHANGICAGYS LS
Sbjct: 36  LRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLS 95

Query: 89  AAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFG 148
           A +AAM   ST+S+AWT FFLDQLLTYL LAAG VSTEVLYL   GD  ITWS+ CG+FG
Sbjct: 96  AIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFG 155

Query: 149 KFCTKATTSVVITFVVVAFYAFISILSSYKLFSRYNAPLPDPSKQLQIPAFHG 202
            FC KA  SV+ITFV VA Y  +S++SSYKLFS+Y+AP+    K +++ AFHG
Sbjct: 156 GFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIEVAAFHG 208

[Close]

BLAST of Cla005414 vs. NCBI nr
Match: gi|659101839|ref|XP_008451819.1| (PREDICTED: CASP-like protein F16 [Cucumis melo])

HSP 1 Score: 344.4 bits (882), Expect = 1.4e-91
Identity = 175/200 (87.50%), Postives = 187/200 (93.50%), Query Frame = 1


Query: 4   NNKYTNNGMTSPPLTSSDHTLAATGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSV 63
           +NKYTNN    P L+SSD +LAATGMRAADTLLRLVPMGLC+AALIVMLKNS+ +DYGSV
Sbjct: 2   DNKYTNNN--PPGLSSSDDSLAATGMRAADTLLRLVPMGLCIAALIVMLKNSEANDYGSV 61

Query: 64  AYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTV 123
           AYSDLGAFKFLVHANGICAGYSFLSAAVAAMSP STISKAWTLFFLDQLLTYLTLAAGTV
Sbjct: 62  AYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPPSTISKAWTLFFLDQLLTYLTLAAGTV 121

Query: 124 STEVLYLAYNGDTEITWSSACGTFGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSRY 183
           STEVLYLAYNGDTEITWS+ACGTFGKFC+KAT SVVITF+VVAFYAFISILSSYKLFSRY
Sbjct: 122 STEVLYLAYNGDTEITWSAACGTFGKFCSKATASVVITFIVVAFYAFISILSSYKLFSRY 181

Query: 184 NAPLPDPS--KQLQIPAFHG 202
           NAPLP P+  +QLQ+P FHG
Sbjct: 182 NAPLPHPNSKQQLQMPVFHG 199

[Close]

BLAST of Cla005414 vs. NCBI nr
Match: gi|449460050|ref|XP_004147759.1| (PREDICTED: CASP-like protein F16 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 3.8e-89
Identity = 174/201 (86.57%), Postives = 185/201 (92.04%), Query Frame = 1


Query: 4   NNKYTNNGMTSPPLTSS-DHTLAATGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGS 63
           +NKYTNN    P L+SS D +LAATGMRAADTLLRLVPMGLC+AALIVMLKNS+ +DYGS
Sbjct: 2   DNKYTNNN--PPGLSSSEDDSLAATGMRAADTLLRLVPMGLCIAALIVMLKNSEANDYGS 61

Query: 64  VAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGT 123
           VAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSP ST+SKAWTLFFLDQLLTYLTLAAGT
Sbjct: 62  VAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPPSTLSKAWTLFFLDQLLTYLTLAAGT 121

Query: 124 VSTEVLYLAYNGDTEITWSSACGTFGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSR 183
           VSTEVLYLAYNGD EITWS+ACGTFGKFC+KAT SVVITFVVVAFYAFISILSSYKLFSR
Sbjct: 122 VSTEVLYLAYNGDKEITWSAACGTFGKFCSKATASVVITFVVVAFYAFISILSSYKLFSR 181

Query: 184 YNAPLPDPS--KQLQIPAFHG 202
           YNAPLP P+  +QLQ P FHG
Sbjct: 182 YNAPLPHPNSKQQLQTPVFHG 200

[Close]

BLAST of Cla005414 vs. NCBI nr
Match: gi|902155558|gb|KNA05915.1| (hypothetical protein SOVF_185150 [Spinacia oleracea])

HSP 1 Score: 239.6 bits (610), Expect = 4.8e-60
Identity = 119/200 (59.50%), Postives = 149/200 (74.50%), Query Frame = 1


Query: 3   SNNKYTNNGMTSPPLTSSDHTLAATGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGS 62
           +  K   N + S     +D +   T MR A+TL RL PMGLCV ALIVMLKN++ +DYGS
Sbjct: 2   AEKKQKGNVVVSERAAVNDESGRTTSMRTAETLFRLFPMGLCVTALIVMLKNTETNDYGS 61

Query: 63  VAYSDLGAFKFLVHANGICAGYSFLSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGT 122
           ++Y+DLGAFK+LVHANGICAGYS LSA   A+    TIS+AWT F LDQ+LTY+ LAAG 
Sbjct: 62  LSYTDLGAFKYLVHANGICAGYSLLSAVFTAVPRPPTISRAWTFFLLDQVLTYVILAAGA 121

Query: 123 VSTEVLYLAYNGDTEITWSSACGTFGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSR 182
           VSTEV+YLAY GDT ITWS+ACGTFG FC KATTSV++TF V+  YA +S++SSY+LFSR
Sbjct: 122 VSTEVVYLAYKGDTAITWSAACGTFGAFCHKATTSVILTFGVMLCYAALSLISSYRLFSR 181

Query: 183 YNAP--LPDPSKQLQIPAFH 201
           ++ P    D +K  ++ AFH
Sbjct: 182 FDPPSATHDANKAAEMAAFH 201

[Close]

BLAST of Cla005414 vs. NCBI nr
Match: gi|590611782|ref|XP_007022201.1| (CASP-like protein isoform 1 [Theobroma cacao])

HSP 1 Score: 239.2 bits (609), Expect = 6.3e-60
Identity = 113/163 (69.33%), Postives = 138/163 (84.66%), Query Frame = 1


Query: 25  AATGMRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSVAYSDLGAFKFLVHANGICAGY 84
           A TGMR  +T+LRLVPM LC+AAL+VMLKNSQ +++GSV+YSDLGAF++LVHANGICAGY
Sbjct: 35  ANTGMRTTETMLRLVPMALCIAALVVMLKNSQSNEFGSVSYSDLGAFRYLVHANGICAGY 94

Query: 85  SFLSAAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEITWSSAC 144
           S LSA +AAM   ST+ +AWTLF LDQ+LTY+ LAAG VSTEVLYL   GD  +TWS+AC
Sbjct: 95  SLLSAIIAAMPRPSTMPRAWTLFLLDQILTYIILAAGAVSTEVLYLTNKGDAAVTWSAAC 154

Query: 145 GTFGKFCTKATTSVVITFVVVAFYAFISILSSYKLFSRYNAPL 188
           GTF  FC KATTSV+ITFVVVA Y  +S++SSY+LFS+Y+AP+
Sbjct: 155 GTFASFCHKATTSVIITFVVVACYVVLSLISSYRLFSKYDAPV 197

[Close]

BLAST of Cla005414 vs. NCBI nr
Match: gi|567899472|ref|XP_006442224.1| (hypothetical protein CICLE_v10022266mg [Citrus clementina])

HSP 1 Score: 238.0 bits (606), Expect = 1.4e-59
Identity = 113/173 (65.32%), Postives = 139/173 (80.35%), Query Frame = 1


Query: 29  MRAADTLLRLVPMGLCVAALIVMLKNSQIDDYGSVAYSDLGAFKFLVHANGICAGYSFLS 88
           +R A+ + RLVPM LCVAAL++MLKNS+  D+GS++YSDLGAF++LVHANGICAGYS LS
Sbjct: 36  LRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLS 95

Query: 89  AAVAAMSPASTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFG 148
           A +AAM   ST+S+AWT FFLDQLLTYL LAAG VSTEVLYL   GD  ITWS+ CG+FG
Sbjct: 96  AIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFG 155

Query: 149 KFCTKATTSVVITFVVVAFYAFISILSSYKLFSRYNAPLPDPSKQLQIPAFHG 202
            FC KA  SV+ITFV VA Y  +S++SSYKLFS+Y+AP+    K +++ AFHG
Sbjct: 156 GFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIEVAAFHG 208

The following BLAST results are available for this feature:

BLAST of Cla005414 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPLA_POPTR	4.3e-61	67.05	CASP-like protein 2A1 OS=Populus trichocarpa GN=POPTRDRAFT_834139 PE=3 SV=1	[more]
CSPL1_GOSHI	1.6e-60	64.57	CASP-like protein F16 OS=Gossypium hirsutum GN=F16 PE=2 SV=1	[more]
CSPLA_SOYBN	2.2e-60	61.41	CASP-like protein 2A2 OS=Glycine max PE=2 SV=1	[more]
CSPLD_RICCO	4.8e-60	61.75	CASP-like protein 2A1 OS=Ricinus communis GN=RCOM_0477780 PE=2 SV=1	[more]
CSPLA_VITVI	4.1e-59	62.64	CASP-like protein 2A1 OS=Vitis vinifera GN=VIT_01s0010g01870 PE=2 SV=1	[more]

BLAST of Cla005414 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVC7_CUCSA	2.6e-89	86.57	CASP-like protein OS=Cucumis sativus GN=Csa_4G064080 PE=3 SV=1	[more]
A0A0K9QF81_SPIOL	3.3e-60	59.50	CASP-like protein OS=Spinacia oleracea GN=SOVF_185150 PE=3 SV=1	[more]
A0A061F9N7_THECC	4.4e-60	69.33	CASP-like protein OS=Theobroma cacao GN=TCM_032366 PE=3 SV=1	[more]
A0A067E5W9_CITSI	9.7e-60	65.32	CASP-like protein OS=Citrus sinensis GN=CISIN_1g028477mg PE=3 SV=1	[more]
V4VR20_9ROSI	9.7e-60	65.32	CASP-like protein OS=Citrus clementina GN=CICLE_v10022266mg PE=3 SV=1	[more]

BLAST of Cla005414 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101839\|ref\|XP_008451819.1\|	1.4e-91	87.50	PREDICTED: CASP-like protein F16 [Cucumis melo]	[more]
gi\|449460050\|ref\|XP_004147759.1\|	3.8e-89	86.57	PREDICTED: CASP-like protein F16 [Cucumis sativus]	[more]
gi\|902155558\|gb\|KNA05915.1\|	4.8e-60	59.50	hypothetical protein SOVF_185150 [Spinacia oleracea]	[more]
gi\|590611782\|ref\|XP_007022201.1\|	6.3e-60	69.33	CASP-like protein isoform 1 [Theobroma cacao]	[more]
gi\|567899472\|ref\|XP_006442224.1\|	1.4e-59	65.32	hypothetical protein CICLE_v10022266mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006459	CASP/CASPL
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0080167	response to karrikin
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla005414	Cla005414.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAMs	TIGR01569	TIGR01569	coord: 36..178 score: 2.7
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 28..166 score: 1.2
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 25..188 score: 5.5
None	No IPR available	PANTHER	PTHR11615:SF151	SUBFAMILY NOT NAMED	coord: 25..188 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla005414	Cla97C07G137370	Watermelon (97103) v2	wmwmbB168
Cla005414	Csa4G064080	Cucumber (Chinese Long) v2	cuwmB311
Cla005414	MELO3C016174	Melon (DHL92) v3.5.1	mewmB508
Cla005414	ClCG07G010640	Watermelon (Charleston Gray)	wcgwmB366
Cla005414	CSPI04G07440	Wild cucumber (PI 183967)	cpiwmB314
Cla005414	Cucsa.179760	Cucumber (Gy14) v1	cgywmB343
Cla005414	CmaCh04G006350	Cucurbita maxima (Rimu)	cmawmB692
Cla005414	CmoCh04G006840	Cucurbita moschata (Rifu)	cmowmB686
Cla005414	Lsi07G008300	Bottle gourd (USVL1VR-Ls)	lsiwmB440
Cla005414	Cp4.1LG01g00810	Cucurbita pepo (Zucchini)	cpewmB419
Cla005414	CsGy4G007320	Cucumber (Gy14) v2	cgybwmB289
Cla005414	MELO3C016174.2	Melon (DHL92) v3.6.1	medwmB494
Cla005414	Carg13111	Silver-seed gourd	carwmB0043
Cla005414	CsaV3_4G007660	Cucumber (Chinese Long) v3	cucwmB323
Cla005414	Bhi01G002412	Wax gourd	wgowmB188

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla005414	Silver-seed gourd	carwmB0652
Cla005414	Cucumber (Chinese Long) v3	cucwmB321
Cla005414	Cucurbita maxima (Rimu)	cmawmB308
Cla005414	Cucurbita moschata (Rifu)	cmowmB302
Cla005414	Cucumber (Chinese Long) v2	cuwmB307
Cla005414	Cucurbita pepo (Zucchini)	cpewmB219