CmoCh04G003500 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G003500
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	BnaA10g07910D protein
Location	Cmo_Chr04 : 1706478 .. 1708808 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCTAAAAAGGTCCGGAAAGAAGGAAAGCGTCTGTCGTGGGTGGAAGTCGAAGGTCCGAATTTTCGGAGTCCAGTGCCCACGAAGAAGATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGTAAGTTTCCTCACTTTTTTCTCCTAATTTTCATTTGGCTGTTGAGCAACCATGTGATGTATAGAATAAAAAGTTGATCGATATGGAGAAGAAAAACTTCGTTGTTCGTCTTTTTTTTTTTGGTCCTCATTGATGTCCTATTTCTGCTCAGCTCTTCGGCTTAGTGGAAGAAGATAGTTTGCTCTAGTTTTTCAGTCATTGCAACACGAAATTGGATTTGTTTGGCTATTTTATTTGTCTTATTGGAATCAACTTCGGTTCTTATGACGCGTTACTCTAATTATAGGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATATACGCTGATTTTAAATCAGGTACACGCATTATATTGCTTTTACAGAAAATTTTGTTGTTCACATCGTCTAGCGTGTTTTGCTTCATTGTTTTTATGAACGGAAAAAAAAAATGCAATATCTACTAATTGATCTCTCGATGCTTTTACTTTTGCTTCTTGCCTTTGTTATCACGAAATCCTCCAAACTTTGCTTTAATTTATGGCAAACAGTAGAAAAGTAGATCTATTAGTGAGTTTTATGTTCGTATTTGAGGGAAAAAACTCTTTAAAGCCCATAAAAATTGGGCGACATTTTCCATCAGGTATTAGTCTGATAAAGCATTTCTTTATGTGAATGGCTTCTACCAGGACATCCAGATCAGTGATTTCCTAGTTCTTGTGATGTGAGTTTAATGTAGAGCTGACCTTAGGAGAGATTTATTGATTCCTGATGTTGTTTACCTTAGTATCATGAAGGCCTATAATTGGTGATCAATAAGAATTTCATGTAATAGTTGGTTCAATCTTTTCTTCTACTTCTCTCAACTCTGATGTGACCGACTGGAATTTCTTTCTTGTTTACTAATTTTCCTAGTTCCTCTATTGAAATTTGTAAATGCTAAAGATTTTAGAGGGAGACCCTGATAAACTTGCTATTTCATGGGAGCCGTTGCTTATCTCTGGACCTCTCATGACTGTTTGTTGTTCTACCCTAATTGGGTCTGTTGGATTATACTGCAGGTTATCATTCAGTTATGTGGAGTGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCTTTTCATTGTTCATAGGAGAACTAGGTTGCTAATTATATTATTACTTCTTTTTTAGCTCTAACTTACACATCTTTGTCTGTTTCAACTGTAATGATTGATTTTTTTGCCAATGTTCTATTGAAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGTAAGGAAAACTGATTCATTCTCTAATTTGATGCTCTAAATAAGAGAGAAATCAAATGAAAATGTTATGGAATTGTTATTTATGCTGACTAGTCGAAGAAGTAATAGCAATGAGACCGGGAAATTGAATTCGATGAAAATTAAAGTAGGCTTTATACAAGTGTAGTTGTCGAGACTCCAAAGATTCATCGTTTCTTTGTCACCATTGGCATCTATACATGAAAATGGTTGGGAGCTTCAATTTGATTGGTTGATTGTATTTATAACTCTACGAGCTTTGATCATAGCTTCCGTGGGGTGATGTCTGTTCCGAATGCTTTATTCTCCATTCTGACTGAACTTTGAATCTCATGAGCCATTTAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGTGGGTTGTTTATTACATGCTATCTTCATTGATTTTCAGAGTCAATAAGTATGAACTAACGCAGGAATTGTGATATGCCTCCATACAGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCCTCCAAAACGCTCTTCATAAGTTATTCTGTACCAAACTGTTGTCCTTTAACGACCAGAAAATCTCTTTATTGTTACTTTTCGTTTCTGAATCCAAAAATAGTTCAAAAGAAAGTTTGGATTTTTCTTTTCTCGATAATTATGTAAGAAAGGTTCCACTTAGGTTGGATCCTACTGCGATTTTGATGAAATTGTAGGTTAAAATTGAC

mRNA sequence

CCGCTAAAAAGGTCCGGAAAGAAGGAAAGCGTCTGTCGTGGGTGGAAGTCGAAGGTCCGAATTTTCGGAGTCCAGTGCCCACGAAGAAGATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATATACGCTGATTTTAAATCAGGTTATCATTCAGTTATGTGGAGTGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCTTTTCATTGTTCATAGGAGAACTAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCCTCCAAAACGCTCTTCATAAGTTATTCTGTACCAAACTGTTGTCCTTTAACGACCAGAAAATCTCTTTATTGTTACTTTTCGTTTCTGAATCCAAAAATAGTTCAAAAGAAAGTTTGGATTTTTCTTTTCTCGATAATTATGTAAGAAAGGTTCCACTTAGGTTGGATCCTACTGCGATTTTGATGAAATTGTAGGTTAAAATTGAC

Coding sequence (CDS)

ATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATATACGCTGATTTTAAATCAGGTTATCATTCAGTTATGTGGAGTGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCTTTTCATTGTTCATAGGAGAACTAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCCTCCAAAACGCTCTTCATAA

Homology

[Close]

BLAST of CmoCh04G003500 vs. TrEMBL
Match: A0A0A0L667_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G175730 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.0e-70
Identity = 141/172 (81.98%), Postives = 155/172 (90.12%), Query Frame = 1


Query: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60
           M+QRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSR ++LIL QV+IQLCGV YLF+L
Sbjct: 1   MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHSLILAQVVIQLCGVAYLFLL 60

Query: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120
           TSK+ETPDKLAISSA+ GFFSLFIGELG+R SR SF+K Y IASSL+LLLL V+VSQGNY
Sbjct: 61  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYAIASSLSLLLLLVDVSQGNY 120

Query: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 173
           TFE I DLSNWQ K+LEL E IRI LGALLQIFAI TVISLV NMSPPKR+S
Sbjct: 121 TFESIGDLSNWQAKQLELFEMIRISLGALLQIFAISTVISLVSNMSPPKRAS 172

[Close]

BLAST of CmoCh04G003500 vs. TrEMBL
Match: M5XDW6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012396mg PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47
Identity = 105/172 (61.05%), Postives = 127/172 (73.84%), Query Frame = 1


Query: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60
           M QR+SA+GRP+GTDGSDF YRMVVDSRYQKVAKGKSRL  LIL Q +IQL GV+  F+ 
Sbjct: 1   MQQRRSASGRPTGTDGSDFNYRMVVDSRYQKVAKGKSRLSALILTQAVIQLIGVL-AFLF 60

Query: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120
           TS  E P+ +AISS  IG  SL IGELGRRRSR S +K Y++ASS+ +LL    V+ GN 
Sbjct: 61  TSNGEGPNVIAISSFAIGSISLIIGELGRRRSRVSLLKVYIVASSIGILLSIACVATGNL 120

Query: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 173
           T E  ++ SNW+TKK ELLE  R  +  L+QIF + T  SL+ NMSPPKR+S
Sbjct: 121 TLEVFQNPSNWETKKFELLEATRTAIAFLVQIFTVSTTASLISNMSPPKRAS 171

[Close]

BLAST of CmoCh04G003500 vs. TrEMBL
Match: B9R9R1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1500150 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.6e-47
Identity = 104/172 (60.47%), Postives = 131/172 (76.16%), Query Frame = 1


Query: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60
           M QRKS  GRPSGTDG DF+YRMVVDSRY KVAKGKSRL TLIL Q +IQL G++ + + 
Sbjct: 1   MQQRKS--GRPSGTDGYDFSYRMVVDSRYTKVAKGKSRLCTLILTQAVIQLIGLLCIVLS 60

Query: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120
            S  +  ++LAI S+VIGFFSL  GELGRRRSR SF++ Y+I S +ALLL     +  N 
Sbjct: 61  ISNEKGANRLAILSSVIGFFSLLTGELGRRRSRVSFLRVYIITSFIALLLSIFCATASNS 120

Query: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 173
           T E I++LS+W+  K EL+ET+ + LG+LLQ+F I TVISL+GNMSPPK++S
Sbjct: 121 TLEVIQNLSHWEKNKFELVETLLLILGSLLQLFTISTVISLIGNMSPPKKAS 170

[Close]

BLAST of CmoCh04G003500 vs. TrEMBL
Match: V4U6R7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006041mg PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.8e-45
Identity = 101/173 (58.38%), Postives = 130/173 (75.14%), Query Frame = 1


Query: 1   MNQRKS-AAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFI 60
           M QRKS A+GRPSGTDGSDF+YRMVVDSRY KVA+GKSRL  LI  Q  IQL G+++ F+
Sbjct: 1   MQQRKSTASGRPSGTDGSDFSYRMVVDSRYTKVARGKSRLSKLIFAQAAIQLIGLLFTFV 60

Query: 61  LTSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGN 120
           L SK E P+ L++SSA +G  SL IGELG++RSR S ++  ++ASS+A+LL   +V + N
Sbjct: 61  LNSKEEGPNPLSLSSASLGLVSLIIGELGQKRSRVSLLRVCVVASSIAVLLSVFSVVRTN 120

Query: 121 YTFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 173
              E I + S W+TKK ELLET R+ +G+ +QIF + T ISLV NMSPPK+SS
Sbjct: 121 SILEVINNPSIWETKKFELLETARVLIGSSVQIFLVSTTISLVHNMSPPKKSS 173

[Close]

BLAST of CmoCh04G003500 vs. TrEMBL
Match: A0A068UX27_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037519001 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.2e-43
Identity = 96/172 (55.81%), Postives = 126/172 (73.26%), Query Frame = 1


Query: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60
           M+QR    GRPSGTDGSDF+YRMVVDSRY+KVA+ KSRL  LI  Q IIQL   V +F+ 
Sbjct: 1   MHQRGPGNGRPSGTDGSDFSYRMVVDSRYKKVAEYKSRLSVLIFTQAIIQLLAAVNVFLS 60

Query: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120
           T+K E  DK+A+SS+VI F SLFIGELGR+RSRASF+K YM+ SS+A+L+   N+S+  Y
Sbjct: 61  TTKMEELDKIAVSSSVICFISLFIGELGRKRSRASFLKLYMLGSSIAVLISTANLSRSAY 120

Query: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 173
             + I+D S+W T  LEL +     LG ++Q++ I T  SL+ NM+PPKR++
Sbjct: 121 VVQVIKDFSSWGTSMLELSKVATGLLGFVVQLYTISTTTSLIRNMAPPKRTA 172

[Close]

BLAST of CmoCh04G003500 vs. TAIR10
Match: AT5G51510.1 (AT5G51510.1 unknown protein)

HSP 1 Score: 137.5 bits (345), Expect = 7.7e-33
Identity = 83/172 (48.26%), Postives = 108/172 (62.79%), Query Frame = 1


Query: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60
           M QRK  AGRPSGTDGSDF+YRMVVDSRY KV K K+RL  LI  Q  I + G+   F+ 
Sbjct: 1   MQQRKPTAGRPSGTDGSDFSYRMVVDSRYTKVTKEKARLRPLIFVQAAIYVIGLSCAFLT 60

Query: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120
           T+K++  + LAI++AV G     IGELG RRSR + ++ Y  AS++ ++L      +   
Sbjct: 61  TTKKDEKNTLAIAAAVAGLVCSLIGELGCRRSRVNLLRLYTAASTIVMVLSVFCAVRSRL 120

Query: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 173
           T E  E  S+  T KLEL   I   LGA++QI AI    SLV NMSPP +++
Sbjct: 121 TME--ERNSSGTTAKLELAGFICAQLGAVVQILAIIVTGSLVNNMSPPTKAA 170

[Close]

BLAST of CmoCh04G003500 vs. NCBI nr
Match: gi|659077236|ref|XP_008439098.1| (PREDICTED: uncharacterized protein LOC103483988 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 3.6e-72
Identity = 144/172 (83.72%), Postives = 158/172 (91.86%), Query Frame = 1


Query: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60
           M+QRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSR +TLIL Q++IQLCGV YLFIL
Sbjct: 1   MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQIVIQLCGVAYLFIL 60

Query: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120
           TSK+ETPDKLAISSA+ GFFSLFIGELG+R SR SF+K Y+IASSL+LLLL V+VSQGNY
Sbjct: 61  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYVIASSLSLLLLLVDVSQGNY 120

Query: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 173
           TFE I DLSNWQTK+LEL E IRI LGALLQIFAI TVISLVGNMSPPKR+S
Sbjct: 121 TFESIGDLSNWQTKQLELFEMIRISLGALLQIFAISTVISLVGNMSPPKRAS 172

[Close]

BLAST of CmoCh04G003500 vs. NCBI nr
Match: gi|449460816|ref|XP_004148140.1| (PREDICTED: uncharacterized protein LOC101211693 [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 4.4e-70
Identity = 141/172 (81.98%), Postives = 155/172 (90.12%), Query Frame = 1


Query: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60
           M+QRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSR ++LIL QV+IQLCGV YLF+L
Sbjct: 1   MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHSLILAQVVIQLCGVAYLFLL 60

Query: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120
           TSK+ETPDKLAISSA+ GFFSLFIGELG+R SR SF+K Y IASSL+LLLL V+VSQGNY
Sbjct: 61  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYAIASSLSLLLLLVDVSQGNY 120

Query: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 173
           TFE I DLSNWQ K+LEL E IRI LGALLQIFAI TVISLV NMSPPKR+S
Sbjct: 121 TFESIGDLSNWQAKQLELFEMIRISLGALLQIFAISTVISLVSNMSPPKRAS 172

[Close]

BLAST of CmoCh04G003500 vs. NCBI nr
Match: gi|694395094|ref|XP_009372894.1| (PREDICTED: uncharacterized protein LOC103961965 [Pyrus x bretschneideri])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 108/172 (62.79%), Postives = 132/172 (76.74%), Query Frame = 1


Query: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60
           M QRK A+GRP+GTDGSDF YRMVVDSRYQKVAKGKSRLY+LIL Q +IQL GV+Y F+ 
Sbjct: 1   MQQRKPASGRPTGTDGSDFNYRMVVDSRYQKVAKGKSRLYSLILTQAVIQLTGVLYAFLF 60

Query: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120
           TS  E P+ +AISS  IG  SL IGELGRRRSR S +K YM+ASS+ +LL    V++G+ 
Sbjct: 61  TSDGEGPNVIAISSVAIGSISLIIGELGRRRSRVSLLKVYMVASSIGILLSIACVAKGSL 120

Query: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 173
           T   +++ SNW+TKK EL+E  R  +  L+QIFAI T  SL+GNMSPPKR+S
Sbjct: 121 TLAVLQNSSNWETKKFELVEATRTVIAFLVQIFAISTTTSLIGNMSPPKRAS 172

[Close]

BLAST of CmoCh04G003500 vs. NCBI nr
Match: gi|657969443|ref|XP_008376440.1| (PREDICTED: uncharacterized protein LOC103439644 [Malus domestica])

HSP 1 Score: 209.9 bits (533), Expect = 3.5e-51
Identity = 107/172 (62.21%), Postives = 132/172 (76.74%), Query Frame = 1


Query: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60
           M QR+ A+GRP+GTDGSDF YRMVVDSRYQKVAKGKSRLY+LIL Q +IQL GV+Y F+ 
Sbjct: 1   MQQRRPASGRPTGTDGSDFNYRMVVDSRYQKVAKGKSRLYSLILTQAVIQLTGVLYAFLF 60

Query: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120
           TS  E P+ +AISS  IG  SL IGELGRRRSR S +K YM+ASS+ +LL    V++G+ 
Sbjct: 61  TSDGEGPNVIAISSVAIGSISLIIGELGRRRSRVSLLKVYMVASSIGILLSIACVAKGSL 120

Query: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 173
           T   +++ SNW+TKK EL+E  R  +  L+QIFAI T  SL+GNMSPPKR+S
Sbjct: 121 TLAVLQNSSNWETKKFELVEATRTVIAFLVQIFAISTTTSLIGNMSPPKRAS 172

[Close]

BLAST of CmoCh04G003500 vs. NCBI nr
Match: gi|694389744|ref|XP_009370480.1| (PREDICTED: uncharacterized protein LOC103959836 [Pyrus x bretschneideri])

HSP 1 Score: 206.8 bits (525), Expect = 2.9e-50
Identity = 106/172 (61.63%), Postives = 130/172 (75.58%), Query Frame = 1


Query: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60
           M QRK A+GRP+GTDGSDF YRMVVDSRYQKVAKGKSRLY+LIL Q +I L GV+Y F+ 
Sbjct: 1   MQQRKPASGRPTGTDGSDFNYRMVVDSRYQKVAKGKSRLYSLILTQAVIHLTGVLYAFLF 60

Query: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120
           TS  E P+ +AISS  IG  SL IGELGRRRSR S +K YM+AS + +LL    V++G+ 
Sbjct: 61  TSDGEGPNVIAISSVAIGSISLIIGELGRRRSRVSLLKVYMVASFIGILLSIACVAKGSL 120

Query: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 173
           T   +++ SNW+TKK EL+E  R  +  L+QIFAI T  SL+GNMSPPKR+S
Sbjct: 121 TLAVLQNSSNWETKKFELVEATRTVIAFLVQIFAISTTTSLIGNMSPPKRAS 172

The following BLAST results are available for this feature:

BLAST of CmoCh04G003500 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G003500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L667_CUCSA	3.0e-70	81.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G175730 PE=4 SV=1	[more]
M5XDW6_PRUPE	1.2e-47	61.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012396mg PE=4 SV=1	[more]
B9R9R1_RICCO	3.6e-47	60.47	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1500150 PE=4 SV=1	[more]
V4U6R7_9ROSI	5.8e-45	58.38	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006041mg PE=4 SV=1	[more]
A0A068UX27_COFCA	3.2e-43	55.81	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037519001 PE=4 SV=1	[more]

BLAST of CmoCh04G003500 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51510.1	7.7e-33	48.26	unknown protein	[more]

BLAST of CmoCh04G003500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077236\|ref\|XP_008439098.1\|	3.6e-72	83.72	PREDICTED: uncharacterized protein LOC103483988 [Cucumis melo]	[more]
gi\|449460816\|ref\|XP_004148140.1\|	4.4e-70	81.98	PREDICTED: uncharacterized protein LOC101211693 [Cucumis sativus]	[more]
gi\|694395094\|ref\|XP_009372894.1\|	1.6e-51	62.79	PREDICTED: uncharacterized protein LOC103961965 [Pyrus x bretschneideri]	[more]
gi\|657969443\|ref\|XP_008376440.1\|	3.5e-51	62.21	PREDICTED: uncharacterized protein LOC103439644 [Malus domestica]	[more]
gi\|694389744\|ref\|XP_009370480.1\|	2.9e-50	61.63	PREDICTED: uncharacterized protein LOC103959836 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009787	Jagunal

Vocabulary: **Cellular Component**
Term	Definition
GO:0005789	endoplasmic reticulum membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0007029	endoplasmic reticulum organization

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007029	endoplasmic reticulum organization
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G003500.1	CmoCh04G003500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009787	Protein jagunal	PANTHER	PTHR20955	UNCHARACTERIZED	coord: 2..172 score: 8.3
IPR009787	Protein jagunal	PFAM	PF07086	Jagunal	coord: 10..134 score: 5.
None	No IPR available	PANTHER	PTHR20955:SF1	PROTEIN JAGUNAL HOMOLOG 1	coord: 2..172 score: 8.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G003500	Cucsa.251590	Cucumber (Gy14) v1	cgycmoB0716
CmoCh04G003500	CmaCh16G001870	Cucurbita maxima (Rimu)	cmacmoB338
CmoCh04G003500	CmaCh04G003330	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G003500	Csa3G175730	Cucumber (Chinese Long) v2	cmocuB694
CmoCh04G003500	Lsi05G013200	Bottle gourd (USVL1VR-Ls)	cmolsiB681
CmoCh04G003500	Cp4.1LG14g05670	Cucurbita pepo (Zucchini)	cmocpeB668
CmoCh04G003500	Cp4.1LG01g03690	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G003500	MELO3C006818.2	Melon (DHL92) v3.6.1	cmomedB777
CmoCh04G003500	Carg16734	Silver-seed gourd	carcmoB1177

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G003500	Cucumber (Gy14) v2	cgybcmoB394
CmoCh04G003500	Silver-seed gourd	carcmoB0514
CmoCh04G003500	Cucumber (Chinese Long) v3	cmocucB0823
CmoCh04G003500	Watermelon (97103) v2	cmowmbB739
CmoCh04G003500	Wax gourd	cmowgoB0852
CmoCh04G003500	Cucurbita moschata (Rifu)	cmocmoB286
CmoCh04G003500	Wild cucumber (PI 183967)	cmocpiB704
CmoCh04G003500	Melon (DHL92) v3.5.1	cmomeB685
CmoCh04G003500	Watermelon (Charleston Gray)	cmowcgB664
CmoCh04G003500	Watermelon (97103) v1	cmowmB702