CmoCh04G003500 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGCTAAAAAGGTCCGGAAAGAAGGAAAGCGTCTGTCGTGGGTGGAAGTCGAAGGTCCGAATTTTCGGAGTCCAGTGCCCACGAAGAAGATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGTAAGTTTCCTCACTTTTTTCTCCTAATTTTCATTTGGCTGTTGAGCAACCATGTGATGTATAGAATAAAAAGTTGATCGATATGGAGAAGAAAAACTTCGTTGTTCGTCTTTTTTTTTTTGGTCCTCATTGATGTCCTATTTCTGCTCAGCTCTTCGGCTTAGTGGAAGAAGATAGTTTGCTCTAGTTTTTCAGTCATTGCAACACGAAATTGGATTTGTTTGGCTATTTTATTTGTCTTATTGGAATCAACTTCGGTTCTTATGACGCGTTACTCTAATTATAGGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATATACGCTGATTTTAAATCAGGTACACGCATTATATTGCTTTTACAGAAAATTTTGTTGTTCACATCGTCTAGCGTGTTTTGCTTCATTGTTTTTATGAACGGAAAAAAAAAATGCAATATCTACTAATTGATCTCTCGATGCTTTTACTTTTGCTTCTTGCCTTTGTTATCACGAAATCCTCCAAACTTTGCTTTAATTTATGGCAAACAGTAGAAAAGTAGATCTATTAGTGAGTTTTATGTTCGTATTTGAGGGAAAAAACTCTTTAAAGCCCATAAAAATTGGGCGACATTTTCCATCAGGTATTAGTCTGATAAAGCATTTCTTTATGTGAATGGCTTCTACCAGGACATCCAGATCAGTGATTTCCTAGTTCTTGTGATGTGAGTTTAATGTAGAGCTGACCTTAGGAGAGATTTATTGATTCCTGATGTTGTTTACCTTAGTATCATGAAGGCCTATAATTGGTGATCAATAAGAATTTCATGTAATAGTTGGTTCAATCTTTTCTTCTACTTCTCTCAACTCTGATGTGACCGACTGGAATTTCTTTCTTGTTTACTAATTTTCCTAGTTCCTCTATTGAAATTTGTAAATGCTAAAGATTTTAGAGGGAGACCCTGATAAACTTGCTATTTCATGGGAGCCGTTGCTTATCTCTGGACCTCTCATGACTGTTTGTTGTTCTACCCTAATTGGGTCTGTTGGATTATACTGCAGGTTATCATTCAGTTATGTGGAGTGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCTTTTCATTGTTCATAGGAGAACTAGGTTGCTAATTATATTATTACTTCTTTTTTAGCTCTAACTTACACATCTTTGTCTGTTTCAACTGTAATGATTGATTTTTTTGCCAATGTTCTATTGAAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGTAAGGAAAACTGATTCATTCTCTAATTTGATGCTCTAAATAAGAGAGAAATCAAATGAAAATGTTATGGAATTGTTATTTATGCTGACTAGTCGAAGAAGTAATAGCAATGAGACCGGGAAATTGAATTCGATGAAAATTAAAGTAGGCTTTATACAAGTGTAGTTGTCGAGACTCCAAAGATTCATCGTTTCTTTGTCACCATTGGCATCTATACATGAAAATGGTTGGGAGCTTCAATTTGATTGGTTGATTGTATTTATAACTCTACGAGCTTTGATCATAGCTTCCGTGGGGTGATGTCTGTTCCGAATGCTTTATTCTCCATTCTGACTGAACTTTGAATCTCATGAGCCATTTAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGTGGGTTGTTTATTACATGCTATCTTCATTGATTTTCAGAGTCAATAAGTATGAACTAACGCAGGAATTGTGATATGCCTCCATACAGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCCTCCAAAACGCTCTTCATAAGTTATTCTGTACCAAACTGTTGTCCTTTAACGACCAGAAAATCTCTTTATTGTTACTTTTCGTTTCTGAATCCAAAAATAGTTCAAAAGAAAGTTTGGATTTTTCTTTTCTCGATAATTATGTAAGAAAGGTTCCACTTAGGTTGGATCCTACTGCGATTTTGATGAAATTGTAGGTTAAAATTGAC CCGCTAAAAAGGTCCGGAAAGAAGGAAAGCGTCTGTCGTGGGTGGAAGTCGAAGGTCCGAATTTTCGGAGTCCAGTGCCCACGAAGAAGATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATATACGCTGATTTTAAATCAGGTTATCATTCAGTTATGTGGAGTGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCTTTTCATTGTTCATAGGAGAACTAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCCTCCAAAACGCTCTTCATAAGTTATTCTGTACCAAACTGTTGTCCTTTAACGACCAGAAAATCTCTTTATTGTTACTTTTCGTTTCTGAATCCAAAAATAGTTCAAAAGAAAGTTTGGATTTTTCTTTTCTCGATAATTATGTAAGAAAGGTTCCACTTAGGTTGGATCCTACTGCGATTTTGATGAAATTGTAGGTTAAAATTGAC ATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATATACGCTGATTTTAAATCAGGTTATCATTCAGTTATGTGGAGTGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCTTTTCATTGTTCATAGGAGAACTAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCCTCCAAAACGCTCTTCATAA
BLAST of CmoCh04G003500 vs. TrEMBL
Match: A0A0A0L667_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G175730 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 3.0e-70 Identity = 141/172 (81.98%), Postives = 155/172 (90.12%), Query Frame = 1
BLAST of CmoCh04G003500 vs. TrEMBL
Match: M5XDW6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012396mg PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47 Identity = 105/172 (61.05%), Postives = 127/172 (73.84%), Query Frame = 1
BLAST of CmoCh04G003500 vs. TrEMBL
Match: B9R9R1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1500150 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 3.6e-47 Identity = 104/172 (60.47%), Postives = 131/172 (76.16%), Query Frame = 1
BLAST of CmoCh04G003500 vs. TrEMBL
Match: V4U6R7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006041mg PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 5.8e-45 Identity = 101/173 (58.38%), Postives = 130/173 (75.14%), Query Frame = 1
BLAST of CmoCh04G003500 vs. TrEMBL
Match: A0A068UX27_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037519001 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 3.2e-43 Identity = 96/172 (55.81%), Postives = 126/172 (73.26%), Query Frame = 1
BLAST of CmoCh04G003500 vs. TAIR10
Match: AT5G51510.1 (AT5G51510.1 unknown protein) HSP 1 Score: 137.5 bits (345), Expect = 7.7e-33 Identity = 83/172 (48.26%), Postives = 108/172 (62.79%), Query Frame = 1
BLAST of CmoCh04G003500 vs. NCBI nr
Match: gi|659077236|ref|XP_008439098.1| (PREDICTED: uncharacterized protein LOC103483988 [Cucumis melo]) HSP 1 Score: 279.6 bits (714), Expect = 3.6e-72 Identity = 144/172 (83.72%), Postives = 158/172 (91.86%), Query Frame = 1
BLAST of CmoCh04G003500 vs. NCBI nr
Match: gi|449460816|ref|XP_004148140.1| (PREDICTED: uncharacterized protein LOC101211693 [Cucumis sativus]) HSP 1 Score: 272.7 bits (696), Expect = 4.4e-70 Identity = 141/172 (81.98%), Postives = 155/172 (90.12%), Query Frame = 1
BLAST of CmoCh04G003500 vs. NCBI nr
Match: gi|694395094|ref|XP_009372894.1| (PREDICTED: uncharacterized protein LOC103961965 [Pyrus x bretschneideri]) HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51 Identity = 108/172 (62.79%), Postives = 132/172 (76.74%), Query Frame = 1
BLAST of CmoCh04G003500 vs. NCBI nr
Match: gi|657969443|ref|XP_008376440.1| (PREDICTED: uncharacterized protein LOC103439644 [Malus domestica]) HSP 1 Score: 209.9 bits (533), Expect = 3.5e-51 Identity = 107/172 (62.21%), Postives = 132/172 (76.74%), Query Frame = 1
BLAST of CmoCh04G003500 vs. NCBI nr
Match: gi|694389744|ref|XP_009370480.1| (PREDICTED: uncharacterized protein LOC103959836 [Pyrus x bretschneideri]) HSP 1 Score: 206.8 bits (525), Expect = 2.9e-50 Identity = 106/172 (61.63%), Postives = 130/172 (75.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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