CmoCh04G001990 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G001990
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Palmate-like pentafoliata 1 transcription factor) (Transcriptional regulator SUPERMAN, putative)
LocationCmo_Chr04 : 982910 .. 988785 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAACTCATCATCTATGGAGACAAATCCTCAACTACTCCAACACCTTCAAACCGTCGCCATCCTGGGAGGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGTCTGGCCGCCGAGGTCCTACTCCTGCAACTTCTGTATGAGACAATTCCGGTCAGCTCAGGCCCTCGGTGGCCACATGAACGTGCATCGAAGAGACCGTGCTCGTCTCCAAAACAATCCCAACCGTTCATTCCTCATCAAACCAACTCCCACCCTCGATCTTCAAACTCACCCTTTTTGTCCCAAAAACAGCAGATCAGATTCTGGGTCGTGTCTCAAACGAGCCAAAGTTTGCGTCTCTGAAGAGCAGCTTGACCTTGAGCTCAAGCTATAGCCATGGCTATAGCTAGCTACTAAAGTTTTAATTTTTTTTTTTCTTTTTTCCATCTTCCCTCGTCTCCTTTTTCATGTACGGAATATATCTGAATGGAAGCGAAGAATTTATCAATGGAAAAAAGCTGTGAGTTTAGTTTCCATCTCGTTCGTTCGTTCATTTATCTCTCTCGATAATTTTATTTCTTTCTCGAAAATATTACATCACAAATACGAGATAAACAAAACTTATATTCATAGATTTTTGTTTTACGACCGAAAATTTGAATATTTAATCTCTTCATCGAATATATCTTGAAATGCATGCAATTGCGAGTAAGAAAGATTACCTTAATATAAACAAGTTTCTCCAATTGACTATATATTAGTGTTTTTTTTTAAGGTTATTTATAGTATAAGATGATAGGGAATTAATTATATTTTTTGGAGGGAAATTTTTTTAATAGTATATAATTGGTTTATTTTTCTTATTTAATGTTAAATCGTTTGGATTTTTTCAATTAATCATTTGTTTGAAATTGATTCTTTAAATATTTTGTATTAATTGAACAAGTTGAGTTTTAATAACAAACAAAACTTATTTAATTGATTTTTAAATTCCTAAAATGCACGAGAATTCTTTTAGATACTAATTTAGAAAATGTTTCAAATAAAATTGTAATTTAAAATTAATTTTTTTAGTTAAAGTAAATACTCAAAACCCTACAAAAAGTAAAGGTAAAAAAGGTGACTCACATTTTAACTTGATTTTGTAAAAAAAAAAAAAAAAATTACCACCTAAGTTCTACGAGACGATCTCATATTTTAGCTAGATTTCATGAAGTTCAAGAGGAGTTATGGTTAAACTCGATCGACCCAGATTAAAGATGATCTAATAGAGTAAAAAAGTAAAAAAAATGGAAGTAAAAAAAGTAGGCATCAAATGAAAGTGTGATGGTTGTGATGTATACTAAAACAGCAAACAGCATTGAAAGTAATGAGAATTTTACAGTGAGGAGAAATGGAAGGCGAAGGCGAAGGGTTTTGGGATGAGATTTGAGAGCTCTTTTGATTTCTGTTCACATAGTGAGTAGCAGTGGATTTAACACACAGATCAGAATAAGATTTAAAAAAAGAAAAAAAAAAAAAAAAGATAGATAGTAACGTCTGATATTAAAAGGTCACAGTCAGCTACATTAACATCCCCCAGATGACTGATAGTAAGGAACATACCTCACCACCTTGAAATACCCTTTTAACTGTTTTATTACCTTACCATCTTCTTCTCTTTTTCCTTTTCATTCCCCATAAATTCCCTTCTTTTTCTCTCACTACATGTCTTCTCAAAATAAGTAAAATTATAACCTACTTATTACACACAAAATCCAAACTTTAGAACGTTCACGATCCCACGTTAGCTGGAGAGGAGAACGAAGAATCCTTCCTTATAAGGGTGTAGACGTGTTTTAAAACTGTGGGGCTGATAACGATACATAACAGGCCAAAACGGACAATATTAAACTTGAGTCATTACAAATGGTATCAGAGGCAGATGTATGCAAGTGACGACGGTTGGAGAGGGGAAACGAAACATTCTCTATAGAAGTGTGATAACCTCTCCCCAGTAGACATGTTTTAAAACTATGAAGTTGATGGTGATATATAACGAGCTAAAATGGACAATATTTTTTAGCAGTGGACTTGAGTTGTTACAAAAAGTACAGAAACGGTAAGATCTCACGTCGGTTGGAGAGAGAATGAAACATTTCTTATAAAGGTGTGAAAACCTCTTACTAATCATGAGGTGACGGCGATATATATTGGAGCCAAAATAAACCGTATCTTAAACAATTTAAAACGTGGAAAGATTAGTTTATGTAAAAAAGACAACAAAAAAGTCTTGTCTCTCCATCAGTGGCACTATTTACGCGTCCTTTTTGTGGTTGTGTTGCTTTAAGATACTGTGTATGTGGTCTACGTCTTTATATATACACAATATTGTTGATATATACGAACAAACCTATGGTTTTCAAATTCAATACCTATGCATGTAACATTAGAATTCAACCCTATTGTTTATTTTTTGTTTAAACTAAGGTGGATAATCATTAATCCCATAGCTGGGTAGGCATGTGCATGTAACCTTACTTTTCAACTCTTTTCTCGATGTTATTAAACATTAATGTTTTCTTTTTTGGCTATCGTTGTTTTGTGTTTGAGGAACTAGATTTGTCTTTCTAAACCTACGACAGCTCCTGTGGTTCTGGATAATGTCTTTTTGGTCTCAACCAAGGATCAAACCTAAAGGGTATGGCTTTAGAAACGACATGTAATAGCCTAAACTCATCGCTTTGACCCGTTACGTATTGTTGTCAGTTTCACTATTTTAAGACGTGTATATTAAGGAGAGGTGTCTACACCTTTACAATGAATGTTTTATTCCTCTCTCTAACCGATGATGCCAGCATCCTTGCTTACACAATGCTCGGTGTCTGGCTCTGATATCATTTGTAACAGTTCAAACTCACTGTGAGCAGATATTGTCCACTTTGACTCATTACATATCGATGTCAGCCTCACGGTTTTAAAACACGTTTGTTAGGGATAGGTTTCCACACTCTTATAAGAAATGTTTTGTTCTCCCCTCCAATCGATGTTGAGATCTCACAATCCACCCATTTGGGGCCCAACATCTTTATTCACACACCGCCCTGTGTCTAGCTCTGATACTATTTGTAATAGTTCAAACTCACTGCGAGCAGATATTGTCCGCTTTGGCCAATTACATATCGATGTCAGTCTCACAGTTTTAAAACGCGTTTGTGAGGGAGAGGTTTCCACACCCTTATAACGAATGTTTTGTTCTCCCCTCCAATCGACGTGGGATCTCACAATCCACTCCTTTGGAGGCCCCAACATCTTTATTGACACACCGCCCAGTGTCTAACTCTGATATCATTTGTAACAGCTCAAGCTCACCGCTAGTAATATATTATCTGCTTTGGCCCGTTACGTATCGTCATCGGCCTCACAGTTTTAAAATGCGTCTGTTAGGAAGAGTGCTTTGTTTTCCTCCCAAACCCCACGAGGGCCATATAGGCAAAAAAGAGAGGAGTGTTGTTCATTCCATTGACTTGTTCTCCATAAGGAAAATTGAGGCAACATGAGTTATGAGCTAAATGGGTTTGTGAGGGGAGAGAGCATTGGTGTACATGGAGGGAATTTTATGGAACTCACCGTTAATGCCCACAAAGTAGTGGAGTCACTTTGACATAAGAATGGGAGAGAATTTAGAGGAAGAGGCTCAGAATTGCCTGGTGTGTGTAAGAGATAGTTTACACGTATATTTGAAAGAGCTGAAAAGAGAAAGAAGGGTCTCAGAGATCGCACATGGCCGGGGCTGGGCTTGATTGATATGCTATATGCCTATTTTGGCTGTTGCAGTGATGCCTATGCGCCATATTTATGGAGCTGTTTTGCTTGGAAGGTTCATTGGGGAATTTCGTCGAACAGGTTGCGGGGAATAAATGCTCACCACCTTTCTTTTCTTCTTCTTCTTCTTCTTCTTTTTCTCTCATTCTCATTTATGGGGTCTTCTGTTTTTGGGGTCTGAAGCTTTCGTTGTATTAGTTTTTGTTTTGGGATTTGTAAACCCTTTTGCTTTTCTTTATTTATTTATATTATTTATTGGTTCCTTTCTCTTTTTTTGTTCTAATTTCTTTGTTTTTCTCTCTCTTTATATGGCTACAACACTGTCTTCCGTGTTTGGTTCACTTGATTTTACTTCTCGGATAACAGCATGTTTTTTTTTTTTTTTTTTCAAAAATATTTTTATCACCCTTTAAAAACTAATATTAAAATGTTCTAACGTACATTTTTCTTCCCTAACTTGACCATAATAATTTTTTTAAACATTGAGCTTGAAGGGTGTTAATGTTAGTCTTTAAATTTCATATTTTTTTTAGATTAATACTTGGACTTTTTAAATTTTCAAGGGAGTTAATGAAACTTTTTAAGGTTGAAGGATATTTTTGAAACGCTATTAAAAGTTGAAGTATATTTTTTAAACAAAATACTACGTTTCTAACGAAAATTAACAACAATAGTATTTTTTATCCTAAAACGATGAAACTTACGATAACACATAATTGACTAAAATAGACGACATCAGCTATAGCCCTTTAGCTTCAAAGTCATGGTCTACTCAATAATCAACTACATGATTCTTCAACTCCCACCTTCTTTAGTATGTTTTAAGAAGCTGAAGTGACCAAAAGTGTTGGCTGTGAATGGGCCAAGGCCAATATGAGCTGTCATTGGTTGTGCACATATTCGTTGGAGCCTAAGAGTGCCCATCATAATGACGGAGAAAGCAAAAGTTAAAACATCTTAAGCAAAAGTAAAAGCAAAAGTAAAAGGAGATAGTGTATTTAGAAATAAAGGCATATCAATCCATTTTAAGTTCTTTATATTTTATTTTAGTTTTAAATTTAGTTATCCATTTAAGAAAAAGGGAGAAAAAATCGATGAAAAAAAATAAAACAATATTTAATACAATTATGGTAGTGGAGCGTCATCACCGAACATATAATTTAGTTTATCTAGAAAAGGTAGTGCTCGATCCAGAAGTTAGACACGTGATTGTTGTGCATAGGATGAACGAGGCTATACGTTATCGTGTTCTAGATTTGAGGTCTTAGGAATCTTCGACCGTTTTTTTTTTTTTGTTTAACATTGTGGATCACATTTTAATAAATTAAAATTGAGTTCTAGATTTTTTTTTTTTTTTTTGATAAATTGGTCAAAAATAAGAAAAAAAAAACTATAACAAAAAGAAAAAGAAAAAAGAAAATATAAATCACGACCTTATGTTGACCGCTCTCCCTGTACCCAAAAACCAACGAAACCCTTCTACCTAAGCAAAGCTCTTCTCGGCACTGTCACTTCAACAACTTCATTTTGACTATAGAAAAAGGTAAGTGGTTTAGGCAAGGCCATCTTCATTGGCTGACCCAGAAGATAATTAAAGCTCTGCAAGAGGCTTCGGCGTATTCACCCTTTTCATCTTCGATTCTTGCCTTTTAGCTTCGGGTAATCGTTTCTTTTTTTCCTTCTTTCTGATGAGTTTATCTTGATTCCTCTTAATTTTTGAGTTCTGATTGAAATTCAACCAGGTTTTGTTACGTAAAGTGGGTATTTTAAATCTTATTTGCTTTGTGTATTGTGTTTGGCATTGTGGGGGGTTTTTAGTTGTAGATGGTTCATTCACATATTAGCTGAATTCTCCGAAAGTGGTTTTGTTTGAATTTGTTGAGTTGTGGATGCTTGTTTCAGAATTCGACTTCGATTTAGAGCAAAAAAGAAAGACCCGTGTAGAAGTACTCGAGGAAGACACTAAATTATGCAGAGAACTTGAGGTGGAGAACAACAATTGCAATTTCATAACGCTTTCATTTTTGTGAGATTAGCATTTTGCTTTAACTTGGTCTCATTCTCTTGCAGATTGTTGCTTGTTGA

mRNA sequence

ATGGCAGAAACTCATCATCTATGGAGACAAATCCTCAACTACTCCAACACCTTCAAACCGTCGCCATCCTGGGAGGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGTCTGGCCGCCGAGGTCCTACTCCTGCAACTTCTGTATGAGACAATTCCGTGAGGAGAAATGGAAGGCGAAGGCGAAGGGTTTTGGGATGAGATTTGAGAGCTCTTTTGATTTCTGTTCACATATGATGCCTATGCGCCATATTTATGGAGCTGTTTTGCTTGGAAGCTCTGCAAGAGGCTTCGGCGTATTCACCCTTTTCATCTTCGATTCTTGCCTTTTAGCTTCGGAATTCGACTTCGATTTAGAGCAAAAAAGAAAGACCCGTGTAGAAGTACTCGAGGAAGACACTAAATTATGCAGAGAACTTGAGATTGTTGCTTGTTGA

Coding sequence (CDS)

ATGGCAGAAACTCATCATCTATGGAGACAAATCCTCAACTACTCCAACACCTTCAAACCGTCGCCATCCTGGGAGGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGTCTGGCCGCCGAGGTCCTACTCCTGCAACTTCTGTATGAGACAATTCCGTGAGGAGAAATGGAAGGCGAAGGCGAAGGGTTTTGGGATGAGATTTGAGAGCTCTTTTGATTTCTGTTCACATATGATGCCTATGCGCCATATTTATGGAGCTGTTTTGCTTGGAAGCTCTGCAAGAGGCTTCGGCGTATTCACCCTTTTCATCTTCGATTCTTGCCTTTTAGCTTCGGAATTCGACTTCGATTTAGAGCAAAAAAGAAAGACCCGTGTAGAAGTACTCGAGGAAGACACTAAATTATGCAGAGAACTTGAGATTGTTGCTTGTTGA
Homology
[Close]
BLAST of CmoCh04G001990 vs. TrEMBL
Match: A0A0A0KLQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G183770 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-09
Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 1 

Query: 1  MAETHHLWRQILNYSNTFKPSPSWE-EKAFAEDTAAAVWPPRSYSCNFCMRQFR 54
          MA+TH LWRQIL      K +  W+ EKAFA+D A AVWPPRSYSC FCMRQFR
Sbjct: 1  MAQTHQLWRQIL------KTTSYWDQEKAFADDVA-AVWPPRSYSCTFCMRQFR 47

[Close]
BLAST of CmoCh04G001990 vs. TrEMBL
Match: A0A067G0F1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046885mg PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-07
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 1 

Query: 10 QILNYSNTFKPSPSWEEKAFAEDTAA-----AVWPPRSYSCNFCMRQFR 54
          QIL YS +   S SWEEKAFAED AA      +WPPRSYSC+FC R+F+
Sbjct: 17 QILKYSFSDSSSSSWEEKAFAEDAAARSLGGCIWPPRSYSCSFCRREFK 65

[Close]
BLAST of CmoCh04G001990 vs. TrEMBL
Match: A0A067KL22_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09121 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-06
Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 1 

Query: 1  MAETHHLWRQILNYSNTFKP-SPSWEEKAFAEDTAAA----VWPPRSYSCNFCMRQFR 54
          M   HHL +     +N+  P   SWEE+AFAED AA+    VWPPRSYSC+FC R+FR
Sbjct: 16 MTSNHHLQKS----TNSHPPYEDSWEEQAFAEDAAASLGGCVWPPRSYSCSFCRREFR 69

[Close]
BLAST of CmoCh04G001990 vs. TrEMBL
Match: V4TBE4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033532mg PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-06
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 1 

Query: 10 QILNYS-NTFKPSPSWEEKAFAEDTAA-----AVWPPRSYSCNFCMRQFR 54
          QIL YS +    S SWEEKAFAED AA      +WPPRSYSC+FC R+F+
Sbjct: 17 QILKYSFSDSSSSSSWEEKAFAEDAAARSLGGCIWPPRSYSCSFCRREFK 66

[Close]
BLAST of CmoCh04G001990 vs. TrEMBL
Match: A0A059AEF4_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_J01231 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-06
Identity = 29/52 (55.77%), Postives = 33/52 (63.46%), Query Frame = 1 

Query: 2  AETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR 54
          A  HHL +     + T     SWEEKAFAED    VWPPRSYSC+FC R+FR
Sbjct: 11 AGIHHLLKSHYGQARTPIGGDSWEEKAFAEDFGC-VWPPRSYSCSFCNREFR 61

[Close]
BLAST of CmoCh04G001990 vs. TAIR10
Match: AT2G37740.1 (AT2G37740.1 zinc-finger protein 10)

HSP 1 Score: 53.1 bits (126), Expect = 1.6e-07
Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 1 

Query: 23 SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFR 54
          SWEE AFAED AA ++WPPRSY+C+FC R+F+
Sbjct: 18 SWEELAFAEDDAAGSLWPPRSYTCSFCRREFK 49

[Close]
BLAST of CmoCh04G001990 vs. TAIR10
Match: AT4G17810.1 (AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 8.0e-07
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 1 

Query: 23 SWEEKAFAEDT----AAAVWPPRSYSCNFCMRQFR 54
          SWE KAF +DT    +   WPPRSY+CNFC R+FR
Sbjct: 22 SWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFR 56

[Close]
BLAST of CmoCh04G001990 vs. NCBI nr
Match: gi|778708382|ref|XP_004151402.2| (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 3.6e-09
Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 1 

Query: 1  MAETHHLWRQILNYSNTFKPSPSWE-EKAFAEDTAAAVWPPRSYSCNFCMRQFR 54
          MA+TH LWRQIL      K +  W+ EKAFA+D A AVWPPRSYSC FCMRQFR
Sbjct: 1  MAQTHQLWRQIL------KTTSYWDQEKAFADDVA-AVWPPRSYSCTFCMRQFR 47

[Close]
BLAST of CmoCh04G001990 vs. NCBI nr
Match: gi|659123508|ref|XP_008461701.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 70.1 bits (170), Expect = 3.6e-09
Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 1 

Query: 1  MAETHHLWRQILNYSNTFKPSPSWE-EKAFAEDTAAAVWPPRSYSCNFCMRQFR 54
          MAETH +WRQIL      K +  W+ EKAFA+D A AVWPPRSYSC FCMRQFR
Sbjct: 1  MAETHQVWRQIL------KTTSYWDQEKAFADDVA-AVWPPRSYSCTFCMRQFR 47

[Close]
BLAST of CmoCh04G001990 vs. NCBI nr
Match: gi|641850289|gb|KDO69162.1| (hypothetical protein CISIN_1g046885mg [Citrus sinensis])

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-07
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 1 

Query: 10 QILNYSNTFKPSPSWEEKAFAEDTAA-----AVWPPRSYSCNFCMRQFR 54
          QIL YS +   S SWEEKAFAED AA      +WPPRSYSC+FC R+F+
Sbjct: 17 QILKYSFSDSSSSSWEEKAFAEDAAARSLGGCIWPPRSYSCSFCRREFK 65

[Close]
BLAST of CmoCh04G001990 vs. NCBI nr
Match: gi|985459714|ref|XP_015388124.1| (PREDICTED: probable transcriptional regulator RABBIT EARS [Citrus sinensis])

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-06
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 1 

Query: 10 QILNYS-NTFKPSPSWEEKAFAEDTAA-----AVWPPRSYSCNFCMRQFR 54
          QIL YS +    S SWEEKAFAED AA      +WPPRSYSC+FC R+F+
Sbjct: 17 QILKYSFSDSSSSSSWEEKAFAEDAAARSLGGCIWPPRSYSCSFCRREFK 66

[Close]
BLAST of CmoCh04G001990 vs. NCBI nr
Match: gi|802615078|ref|XP_012074989.1| (PREDICTED: uncharacterized protein LOC105636337 [Jatropha curcas])

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-06
Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 1 

Query: 1  MAETHHLWRQILNYSNTFKP-SPSWEEKAFAEDTAAA----VWPPRSYSCNFCMRQFR 54
          M   HHL +     +N+  P   SWEE+AFAED AA+    VWPPRSYSC+FC R+FR
Sbjct: 16 MTSNHHLQKS----TNSHPPYEDSWEEQAFAEDAAASLGGCVWPPRSYSCSFCRREFR 69

The following BLAST results are available for this feature:
BLAST of CmoCh04G001990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh04G001990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLQ3_CUCSA2.5e-0966.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G183770 PE=4 SV=1[more]
A0A067G0F1_CITSI1.4e-0761.22Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046885mg PE=4 SV=1[more]
A0A067KL22_JATCU1.5e-0653.45Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09121 PE=4 SV=1[more]
V4TBE4_9ROSI1.5e-0660.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033532mg PE=4 SV=1[more]
A0A059AEF4_EUCGR3.4e-0655.77Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_J01231 PE=4 ... [more]
BLAST of CmoCh04G001990 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G37740.11.6e-0768.75 zinc-finger protein 10[more]
AT4G17810.18.0e-0760.00 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of CmoCh04G001990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778708382|ref|XP_004151402.2|3.6e-0966.67PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis sativus][more]
gi|659123508|ref|XP_008461701.1|3.6e-0966.67PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo][more]
gi|641850289|gb|KDO69162.1|2.0e-0761.22hypothetical protein CISIN_1g046885mg [Citrus sinensis][more]
gi|985459714|ref|XP_015388124.1|2.2e-0660.00PREDICTED: probable transcriptional regulator RABBIT EARS [Citrus sinensis][more]
gi|802615078|ref|XP_012074989.1|2.2e-0653.45PREDICTED: uncharacterized protein LOC105636337 [Jatropha curcas][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G001990.1CmoCh04G001990.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G001990CmaCh04G001950Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G001990Cp4.1LG01g04890Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G001990MELO3C023884.2Melon (DHL92) v3.6.1cmomedB733
CmoCh04G001990CsaV3_5G008360Cucumber (Chinese Long) v3cmocucB0873
CmoCh04G001990Cla97C07G131880Watermelon (97103) v2cmowmbB755
CmoCh04G001990Bhi06G000869Wax gourdcmowgoB0837
CmoCh04G001990CsGy5G007260Cucumber (Gy14) v2cgybcmoB652
CmoCh04G001990Carg18337Silver-seed gourdcarcmoB0123
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G001990Cucumber (Gy14) v2cgybcmoB522
CmoCh04G001990Cucumber (Gy14) v2cgybcmoB823
CmoCh04G001990Melon (DHL92) v3.6.1cmomedB798
CmoCh04G001990Silver-seed gourdcarcmoB0372
CmoCh04G001990Silver-seed gourdcarcmoB0924
CmoCh04G001990Silver-seed gourdcarcmoB1247
CmoCh04G001990Cucumber (Chinese Long) v3cmocucB0837
CmoCh04G001990Cucumber (Chinese Long) v3cmocucB0906
CmoCh04G001990Watermelon (97103) v2cmowmbB722
CmoCh04G001990Wax gourdcmowgoB0864
CmoCh04G001990Cucurbita moschata (Rifu)cmocmoB267
CmoCh04G001990Cucurbita moschata (Rifu)cmocmoB448
CmoCh04G001990Cucurbita moschata (Rifu)cmocmoB464
CmoCh04G001990Cucurbita moschata (Rifu)cmocmoB478
CmoCh04G001990Cucumber (Gy14) v1cgycmoB0373
CmoCh04G001990Cucumber (Gy14) v1cgycmoB0474
CmoCh04G001990Cucurbita maxima (Rimu)cmacmoB731
CmoCh04G001990Wild cucumber (PI 183967)cmocpiB747
CmoCh04G001990Wild cucumber (PI 183967)cmocpiB776
CmoCh04G001990Cucumber (Chinese Long) v2cmocuB737
CmoCh04G001990Cucumber (Chinese Long) v2cmocuB767
CmoCh04G001990Melon (DHL92) v3.5.1cmomeB646
CmoCh04G001990Melon (DHL92) v3.5.1cmomeB676
CmoCh04G001990Watermelon (Charleston Gray)cmowcgB630
CmoCh04G001990Watermelon (Charleston Gray)cmowcgB676
CmoCh04G001990Watermelon (97103) v1cmowmB673
CmoCh04G001990Watermelon (97103) v1cmowmB737
CmoCh04G001990Cucurbita pepo (Zucchini)cmocpeB653
CmoCh04G001990Cucurbita pepo (Zucchini)cmocpeB674
CmoCh04G001990Bottle gourd (USVL1VR-Ls)cmolsiB630
CmoCh04G001990Bottle gourd (USVL1VR-Ls)cmolsiB649
CmoCh04G001990Bottle gourd (USVL1VR-Ls)cmolsiB670