CmoCh04G001230 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G001230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Trichome birefringence-like protein
Location	Cmo_Chr04 : 639508 .. 640669 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAAATGAAATTTTACAGACAAGGGTCTTTCGAGGATGAAGCACAGGACATAGTGGAGCTGTCCACGGAGGATGCTTATCGCATGGCAATGAAGAGCATGTTGAGATGGGTTAGGAAGAACATGGACCCCAAAAAGACTAGGGTTTTCTTCACTGCCATGTCCCCTTCTCATGGAAAGTTAGTTCTCTTTTTTCATATTCGAATATAATGTGACATCTGATTTTACACGAAAAATTATTTGAGGATAACACATATTTGTAGCGGCTATATTGAATAATGTTTTTTGTCATAGCCATCGTAACGTAACCAAGCTTTCATTTGGCTCTATAGGAGTATTGATTGGGGTGGTGAACAGGGTGACAACTGCTACAACCAAACGACTCTAATTGAAGATTCAAACTATTGGGGATCCGATTCGAAAAAAAGCTTAATGAAAGTGATTGGGGAAGTTTTCAGCCGGTCGAAGTTTCCTATCACATTTCTTAACATCACACAGCTCTCGAGCTATCGTAGAGATGCACACACATCGATTTACAAGAAGCAATGGTCACCATTAACGCCGGAGCAGCTAGCGAACCCGGTAAGCTATGCGGATTGCATCCATTGGTGCATGCCTGGTCTCCAAGATACTTGGAATGAGCTTCTTTTTACCAAACTTTTATATCCTCATTAATTGATGTTAAAATTCATCTGGGTTCTTCCCTCGGATCCTCTTTCTTTCATGTGGGTTTGTGAGCTTTGGGATTGATTGGTAGAGATAAAAGATGAGAAAATCAATTGAAAGATAGAGAGTGAATGATCACTATCACGGTCGTACATCTTTAATCGTACGATGTCGTAATTTTGACACGCTTACGACAAGTCTTAAGGGGGACTCAAGCTCTATTCATATTTTTTGTCCGACTTTGTGGCTTCGTCGTATCGTCAACAAGGTTTGCCTTTGCCAATTGAACACATCCTATGTGAAATCTAAGTTTGTTCAGCCGCACATACTGTTCATGTGTGCGTGTTCAATCGTGTGTGACACAATCACGTTGCATCATACCGTCATCTTGGTTCCCAACAACACAATTCATGCATCGTGGTGCCGATCCATGCCTCAGGACACATCCATTCATGTGAAATTCAAAAAGGGATGAGCTGAGTTTTTTTTTTGG

mRNA sequence

ATGAATGAAATGAAATTTTACAGACAAGGGTCTTTCGAGGATGAAGCACAGGACATAGTGGAGCTGTCCACGGAGGATGCTTATCGCATGGCAATGAAGAGCATGTTGAGATGGGTTAGGAAGAACATGGACCCCAAAAAGACTAGGGTTTTCTTCACTGCCATGTCCCCTTCTCATGGAAAGAGTATTGATTGGGGTGGTGAACAGGGTGACAACTGCTACAACCAAACGACTCTAATTGAAGATTCAAACTATTGGGGATCCGATTCGAAAAAAAGCTTAATGAAAGTGATTGGGGAAGTTTTCAGCCGGTCGAAGTTTCCTATCACATTTCTTAACATCACACAGCTCTCGAGCTATCGTAGAGATGCACACACATCGATTTACAAGAAGCAATGGTCACCATTAACGCCGGAGCAGCTAGCGAACCCGGTAAGCTATGCGGATTGCATCCATTGGTGCATGCCTGGTCTCCAAGATACTTGGAATGAGCTTCTTTTTACCAAACTTTTATATCCTCATTAATTGATGTTAAAATTCATCTGGGTTCTTCCCTCGGATCCTCTTTCTTTCATGTGGGTTTGTGAGCTTTGGGATTGATTGGTAGAGATAAAAGATGAGAAAATCAATTGAAAGATAGAGAGTGAATGATCACTATCACGGTCGTACATCTTTAATCGTACGATGTCGTAATTTTGACACGCTTACGACAAGTCTTAAGGGGGACTCAAGCTCTATTCATATTTTTTGTCCGACTTTGTGGCTTCGTCGTATCGTCAACAAGGTTTGCCTTTGCCAATTGAACACATCCTATGTGAAATCTAAGTTTGTTCAGCCGCACATACTGTTCATGTGTGCGTGTTCAATCGTGTGTGACACAATCACGTTGCATCATACCGTCATCTTGGTTCCCAACAACACAATTCATGCATCGTGGTGCCGATCCATGCCTCAGGACACATCCATTCATGTGAAATTCAAAAAGGGATGAGCTGAGTTTTTTTTTTGG

Coding sequence (CDS)

ATGAATGAAATGAAATTTTACAGACAAGGGTCTTTCGAGGATGAAGCACAGGACATAGTGGAGCTGTCCACGGAGGATGCTTATCGCATGGCAATGAAGAGCATGTTGAGATGGGTTAGGAAGAACATGGACCCCAAAAAGACTAGGGTTTTCTTCACTGCCATGTCCCCTTCTCATGGAAAGAGTATTGATTGGGGTGGTGAACAGGGTGACAACTGCTACAACCAAACGACTCTAATTGAAGATTCAAACTATTGGGGATCCGATTCGAAAAAAAGCTTAATGAAAGTGATTGGGGAAGTTTTCAGCCGGTCGAAGTTTCCTATCACATTTCTTAACATCACACAGCTCTCGAGCTATCGTAGAGATGCACACACATCGATTTACAAGAAGCAATGGTCACCATTAACGCCGGAGCAGCTAGCGAACCCGGTAAGCTATGCGGATTGCATCCATTGGTGCATGCCTGGTCTCCAAGATACTTGGAATGAGCTTCTTTTTACCAAACTTTTATATCCTCATTAA

Homology

[Close]

BLAST of CmoCh04G001230 vs. Swiss-Prot
Match: TBL33_ARATH (Protein trichome birefringence-like 33 OS=Arabidopsis thaliana GN=TBL33 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.9e-77
Identity = 130/164 (79.27%), Postives = 146/164 (89.02%), Query Frame = 1


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSF+D+ ++IVE+STEDAYRM MKSMLRWV+ NMD KKTRVFFT+MSP+H K IDWGGE
Sbjct: 261 QGSFDDKEKNIVEVSTEDAYRMGMKSMLRWVKNNMDRKKTRVFFTSMSPTHAKGIDWGGE 320

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
            G NCYNQTTLIED +YWGSD +KS+MKVIGEVF RSK PIT LNITQ+S+YR+DAHTSI
Sbjct: 321 PGQNCYNQTTLIEDPSYWGSDCRKSIMKVIGEVFGRSKTPITLLNITQMSNYRKDAHTSI 380

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLY 173
           YKKQWSPLT EQL NP SYADC+HWC+PGLQDTWNELLF KL Y
Sbjct: 381 YKKQWSPLTAEQLENPTSYADCVHWCLPGLQDTWNELLFAKLFY 424

[Close]

BLAST of CmoCh04G001230 vs. Swiss-Prot
Match: TBL32_ARATH (Protein trichome birefringence-like 32 OS=Arabidopsis thaliana GN=TBL32 PE=2 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.4e-70
Identity = 120/166 (72.29%), Postives = 141/166 (84.94%), Query Frame = 1


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           +GSF+DE + IVE+ +EDAYRMA+K+M++WV+KNMDP KTRVFF  MSP+H K  DWGGE
Sbjct: 286 EGSFKDEKKRIVEMESEDAYRMALKTMVKWVKKNMDPLKTRVFFATMSPTHYKGEDWGGE 345

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIG-EVFSRSKFPITFLNITQLSSYRRDAHTS 128
           QG NCYNQTT I+D N+W SD  K+LMKVIG E+  R++FP+T LNITQLS YR+DAHTS
Sbjct: 346 QGKNCYNQTTPIQDMNHWPSDCSKTLMKVIGEELDQRAEFPVTVLNITQLSGYRKDAHTS 405

Query: 129 IYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYP 174
           IYKKQWSPLT EQLANP SY+DCIHWC+PGLQDTWNEL F KL YP
Sbjct: 406 IYKKQWSPLTKEQLANPASYSDCIHWCLPGLQDTWNELFFAKLFYP 451

[Close]

BLAST of CmoCh04G001230 vs. Swiss-Prot
Match: TBL3_ARATH (Protein trichome birefringence-like 3 OS=Arabidopsis thaliana GN=TBL3 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.3e-42
Identity = 79/162 (48.77%), Postives = 103/162 (63.58%), Query Frame = 1


Query: 10  GSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGEQ 69
           GSF +       L T+ AYR+ +K+   WV   +DP KTRVFFT MSP+H +S DWG   
Sbjct: 273 GSFGNGESGAEALDTQVAYRLGLKTWANWVDSTVDPNKTRVFFTTMSPTHTRSADWGKPN 332

Query: 70  GDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSIY 129
           G  C+N+T  I+D  +WG+ S K +MKV+  V       +T +NITQLS YR DAHTS+Y
Sbjct: 333 GTKCFNETKPIKDKKFWGTGSNKQMMKVVSSVIKHMTTHVTVINITQLSEYRIDAHTSVY 392

Query: 130 KKQWSP-LTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKL 171
            +     LT EQ A+P+ +ADCIHWC+PGL DTWN +L   L
Sbjct: 393 TETGGKILTAEQRADPMHHADCIHWCLPGLPDTWNRILLAHL 434

[Close]

BLAST of CmoCh04G001230 vs. Swiss-Prot
Match: TBL31_ARATH (Protein trichome birefringence-like 31 OS=Arabidopsis thaliana GN=TBL31 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38
Identity = 69/161 (42.86%), Postives = 109/161 (67.70%), Query Frame = 1


Query: 15  EAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGEQGDNCY 74
           +  ++ E +   AY+MA+++  +W +  ++ +K +VFFT+MSP+H  S +W       CY
Sbjct: 249 DTSEVREYNVTTAYKMALETWAKWFKTKINSEKQKVFFTSMSPTHLWSWEWNPGSDGTCY 308

Query: 75  NQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSIY-KKQW 134
           ++   I+  +YWG+ S + +MK++G+V SR    +TFLNITQLS YR+D HT++Y +++ 
Sbjct: 309 DELYPIDKRSYWGTGSNQEIMKIVGDVLSRVGENVTFLNITQLSEYRKDGHTTVYGERRG 368

Query: 135 SPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
             LT EQ A+P +Y DCIHWC+PG+ DTWNE+L+  LL  H
Sbjct: 369 KLLTKEQRADPKNYGDCIHWCLPGVPDTWNEILYAYLLRSH 409

[Close]

BLAST of CmoCh04G001230 vs. Swiss-Prot
Match: TBL35_ARATH (Protein trichome birefringence-like 35 OS=Arabidopsis thaliana GN=TBL35 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-37
Identity = 73/171 (42.69%), Postives = 101/171 (59.06%), Query Frame = 1


Query: 2   NEMKFYRQGSFE-----DEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMS 61
           N   ++RQ S +     +E     E+ + +   MAM S   WV  N+DP K RVFF  MS
Sbjct: 276 NTYLWWRQDSVKLRWSSEEKGSCEEVKSAEGMEMAMDSWGDWVANNVDPNKKRVFFVTMS 335

Query: 62  PSHGKSIDWGGEQGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQ 121
           P+H  S +W      NCY +   IE+ +YWGS S    M+++  V  R    ++ +NITQ
Sbjct: 336 PTHQWSREWNPGSEGNCYGEKKPIEEESYWGSGSDIPTMRMVKRVLERLGPKVSVINITQ 395

Query: 122 LSSYRRDAHTSIYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLF 168
           LS YR+D H S+Y+K W PL  ++L NP SY+DC HWC+PG+ D WN+LLF
Sbjct: 396 LSEYRKDGHPSVYRKFWEPLNEDRLKNPASYSDCTHWCVPGVPDVWNQLLF 446

[Close]

BLAST of CmoCh04G001230 vs. TrEMBL
Match: A0A0A0KM73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G217170 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 3.6e-87
Identity = 149/166 (89.76%), Postives = 161/166 (96.99%), Query Frame = 1


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           +GSFEDE QDIVELSTEDAYRMAMKSMLRWVRKNM+PKKTRVFFT+MSPSHGKSIDWGGE
Sbjct: 264 EGSFEDEVQDIVELSTEDAYRMAMKSMLRWVRKNMNPKKTRVFFTSMSPSHGKSIDWGGE 323

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           +G NCYNQTT+IED NYWGSDS+KS+M+VIGEVF +SKFPITFLNITQLSSYRRDAHTSI
Sbjct: 324 EGGNCYNQTTIIEDPNYWGSDSRKSIMEVIGEVFEKSKFPITFLNITQLSSYRRDAHTSI 383

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADC+HWC+PGLQDTWNELLFTKL YP+
Sbjct: 384 YKKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFTKLFYPY 429

[Close]

BLAST of CmoCh04G001230 vs. TrEMBL
Match: B9S472_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0687400 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 2.7e-82
Identity = 141/165 (85.45%), Postives = 157/165 (95.15%), Query Frame = 1


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSF+DEA+DIVEL TEDAYRMAMKSM+RWVRKNM+PKKTRVFFT+MSPSHGKSIDWGGE
Sbjct: 257 QGSFDDEAKDIVELPTEDAYRMAMKSMIRWVRKNMNPKKTRVFFTSMSPSHGKSIDWGGE 316

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
             +NCYN+TTLI ++ YWGSDS+KS+M+VIGEVF +SKFPITFLNITQLS+YR+DAHTSI
Sbjct: 317 PDNNCYNETTLINNATYWGSDSRKSIMEVIGEVFRKSKFPITFLNITQLSNYRKDAHTSI 376

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYP 174
           YKKQWSPLTPEQLANPVSYADC+HWCMPGLQDTWNELLF KL YP
Sbjct: 377 YKKQWSPLTPEQLANPVSYADCVHWCMPGLQDTWNELLFAKLFYP 421

[Close]

BLAST of CmoCh04G001230 vs. TrEMBL
Match: A0A151U187_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_005705 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 2.7e-82
Identity = 142/163 (87.12%), Postives = 156/163 (95.71%), Query Frame = 1


Query: 10  GSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGEQ 69
           GSF+DEA++IVELSTEDAYRMAMKSMLRWVR NMDPKKTRVFFT+MSPSHGKSIDWGGE+
Sbjct: 263 GSFDDEAKEIVELSTEDAYRMAMKSMLRWVRLNMDPKKTRVFFTSMSPSHGKSIDWGGEE 322

Query: 70  GDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSIY 129
           G NCYN+TTLI+D  YWGSD +KS+M+VIGEVFS++K PITFLNITQLSSYRRDAHTSIY
Sbjct: 323 GGNCYNETTLIDDPTYWGSDCRKSIMEVIGEVFSKTKVPITFLNITQLSSYRRDAHTSIY 382

Query: 130 KKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLY 173
           KKQWSPLTPEQLANPVSYADC+HWC+PGLQDTWNELLFTKL Y
Sbjct: 383 KKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFTKLFY 425

[Close]

BLAST of CmoCh04G001230 vs. TrEMBL
Match: A0A067LJA3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01200 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.0e-81
Identity = 142/171 (83.04%), Postives = 160/171 (93.57%), Query Frame = 1


Query: 3   EMKFYRQGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKS 62
           +MK  R GSF+DEA+DIVE+ TEDAYRMAMKSM+RWVRKNM+P+KTRVFFT+MSPSHGKS
Sbjct: 253 KMKILR-GSFDDEAKDIVEIPTEDAYRMAMKSMMRWVRKNMNPRKTRVFFTSMSPSHGKS 312

Query: 63  IDWGGEQGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRR 122
           IDWGGE G NCYN+TTLI +S+YWGSD +KS+M+VIGEVF +SKFPITFLNITQLSSYR+
Sbjct: 313 IDWGGEPGLNCYNETTLITNSSYWGSDCRKSIMEVIGEVFGKSKFPITFLNITQLSSYRK 372

Query: 123 DAHTSIYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYP 174
           DAHTSIYKKQWSPLTPEQLANPVSYADC+HWC+PGLQDTWNELLF KL YP
Sbjct: 373 DAHTSIYKKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFAKLFYP 422

[Close]

BLAST of CmoCh04G001230 vs. TrEMBL
Match: D7T4I9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01930 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.0e-81
Identity = 142/171 (83.04%), Postives = 158/171 (92.40%), Query Frame = 1


Query: 3   EMKFYRQGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKS 62
           +MK  R GSF+DE +DIVE++TEDA+RMAMKSML+WV KNMDPKKTRVFFT+MSPSH KS
Sbjct: 250 KMKILR-GSFDDEVKDIVEITTEDAFRMAMKSMLKWVEKNMDPKKTRVFFTSMSPSHAKS 309

Query: 63  IDWGGEQGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRR 122
           IDWGGE G NCYN+TT+IED  YWGSD +KS+M+VIGEVFS+SK PITFLNITQLSSYRR
Sbjct: 310 IDWGGEAGKNCYNETTMIEDPTYWGSDCRKSVMEVIGEVFSKSKVPITFLNITQLSSYRR 369

Query: 123 DAHTSIYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYP 174
           DAHTSIYKKQWSPLTPEQLANPVSYADC+HWC+PGLQDTWNELLFTKL YP
Sbjct: 370 DAHTSIYKKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFTKLFYP 419

[Close]

BLAST of CmoCh04G001230 vs. TAIR10
Match: AT2G40320.1 (AT2G40320.1 TRICHOME BIREFRINGENCE-LIKE 33)

HSP 1 Score: 289.3 bits (739), Expect = 1.6e-78
Identity = 130/164 (79.27%), Postives = 146/164 (89.02%), Query Frame = 1


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSF+D+ ++IVE+STEDAYRM MKSMLRWV+ NMD KKTRVFFT+MSP+H K IDWGGE
Sbjct: 261 QGSFDDKEKNIVEVSTEDAYRMGMKSMLRWVKNNMDRKKTRVFFTSMSPTHAKGIDWGGE 320

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
            G NCYNQTTLIED +YWGSD +KS+MKVIGEVF RSK PIT LNITQ+S+YR+DAHTSI
Sbjct: 321 PGQNCYNQTTLIEDPSYWGSDCRKSIMKVIGEVFGRSKTPITLLNITQMSNYRKDAHTSI 380

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLY 173
           YKKQWSPLT EQL NP SYADC+HWC+PGLQDTWNELLF KL Y
Sbjct: 381 YKKQWSPLTAEQLENPTSYADCVHWCLPGLQDTWNELLFAKLFY 424

[Close]

BLAST of CmoCh04G001230 vs. TAIR10
Match: AT3G11030.1 (AT3G11030.1 TRICHOME BIREFRINGENCE-LIKE 32)

HSP 1 Score: 265.8 bits (678), Expect = 1.9e-71
Identity = 120/166 (72.29%), Postives = 141/166 (84.94%), Query Frame = 1


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           +GSF+DE + IVE+ +EDAYRMA+K+M++WV+KNMDP KTRVFF  MSP+H K  DWGGE
Sbjct: 286 EGSFKDEKKRIVEMESEDAYRMALKTMVKWVKKNMDPLKTRVFFATMSPTHYKGEDWGGE 345

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIG-EVFSRSKFPITFLNITQLSSYRRDAHTS 128
           QG NCYNQTT I+D N+W SD  K+LMKVIG E+  R++FP+T LNITQLS YR+DAHTS
Sbjct: 346 QGKNCYNQTTPIQDMNHWPSDCSKTLMKVIGEELDQRAEFPVTVLNITQLSGYRKDAHTS 405

Query: 129 IYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYP 174
           IYKKQWSPLT EQLANP SY+DCIHWC+PGLQDTWNEL F KL YP
Sbjct: 406 IYKKQWSPLTKEQLANPASYSDCIHWCLPGLQDTWNELFFAKLFYP 451

[Close]

BLAST of CmoCh04G001230 vs. TAIR10
Match: AT5G01360.1 (AT5G01360.1 Plant protein of unknown function (DUF828))

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-43
Identity = 79/162 (48.77%), Postives = 103/162 (63.58%), Query Frame = 1


Query: 10  GSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGEQ 69
           GSF +       L T+ AYR+ +K+   WV   +DP KTRVFFT MSP+H +S DWG   
Sbjct: 273 GSFGNGESGAEALDTQVAYRLGLKTWANWVDSTVDPNKTRVFFTTMSPTHTRSADWGKPN 332

Query: 70  GDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSIY 129
           G  C+N+T  I+D  +WG+ S K +MKV+  V       +T +NITQLS YR DAHTS+Y
Sbjct: 333 GTKCFNETKPIKDKKFWGTGSNKQMMKVVSSVIKHMTTHVTVINITQLSEYRIDAHTSVY 392

Query: 130 KKQWSP-LTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKL 171
            +     LT EQ A+P+ +ADCIHWC+PGL DTWN +L   L
Sbjct: 393 TETGGKILTAEQRADPMHHADCIHWCLPGLPDTWNRILLAHL 434

[Close]

BLAST of CmoCh04G001230 vs. TAIR10
Match: AT1G73140.1 (AT1G73140.1 Plant protein of unknown function (DUF828))

HSP 1 Score: 161.0 bits (406), Expect = 6.6e-40
Identity = 69/161 (42.86%), Postives = 109/161 (67.70%), Query Frame = 1


Query: 15  EAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGEQGDNCY 74
           +  ++ E +   AY+MA+++  +W +  ++ +K +VFFT+MSP+H  S +W       CY
Sbjct: 249 DTSEVREYNVTTAYKMALETWAKWFKTKINSEKQKVFFTSMSPTHLWSWEWNPGSDGTCY 308

Query: 75  NQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSIY-KKQW 134
           ++   I+  +YWG+ S + +MK++G+V SR    +TFLNITQLS YR+D HT++Y +++ 
Sbjct: 309 DELYPIDKRSYWGTGSNQEIMKIVGDVLSRVGENVTFLNITQLSEYRKDGHTTVYGERRG 368

Query: 135 SPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
             LT EQ A+P +Y DCIHWC+PG+ DTWNE+L+  LL  H
Sbjct: 369 KLLTKEQRADPKNYGDCIHWCLPGVPDTWNEILYAYLLRSH 409

[Close]

BLAST of CmoCh04G001230 vs. TAIR10
Match: AT5G01620.3 (AT5G01620.3 TRICHOME BIREFRINGENCE-LIKE 35)

HSP 1 Score: 157.1 bits (396), Expect = 9.6e-39
Identity = 73/171 (42.69%), Postives = 101/171 (59.06%), Query Frame = 1


Query: 2   NEMKFYRQGSFE-----DEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMS 61
           N   ++RQ S +     +E     E+ + +   MAM S   WV  N+DP K RVFF  MS
Sbjct: 284 NTYLWWRQDSVKLRWSSEEKGSCEEVKSAEGMEMAMDSWGDWVANNVDPNKKRVFFVTMS 343

Query: 62  PSHGKSIDWGGEQGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQ 121
           P+H  S +W      NCY +   IE+ +YWGS S    M+++  V  R    ++ +NITQ
Sbjct: 344 PTHQWSREWNPGSEGNCYGEKKPIEEESYWGSGSDIPTMRMVKRVLERLGPKVSVINITQ 403

Query: 122 LSSYRRDAHTSIYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLF 168
           LS YR+D H S+Y+K W PL  ++L NP SY+DC HWC+PG+ D WN+LLF
Sbjct: 404 LSEYRKDGHPSVYRKFWEPLNEDRLKNPASYSDCTHWCVPGVPDVWNQLLF 454

[Close]

BLAST of CmoCh04G001230 vs. NCBI nr
Match: gi|659109721|ref|XP_008454841.1| (PREDICTED: protein trichome birefringence-like 33 [Cucumis melo])

HSP 1 Score: 329.7 bits (844), Expect = 3.0e-87
Identity = 150/166 (90.36%), Postives = 161/166 (96.99%), Query Frame = 1


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSFED+ QDIVELSTEDAYRMAMKSMLRWVRKNM+PKKTRVFFT+MSPSHGKSIDWGGE
Sbjct: 263 QGSFEDQVQDIVELSTEDAYRMAMKSMLRWVRKNMNPKKTRVFFTSMSPSHGKSIDWGGE 322

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           +G NCYNQTTLIED NYWGSDS+KS+M+VIGEVF +SKFPITFLNITQLSSYRRDAHTSI
Sbjct: 323 EGGNCYNQTTLIEDPNYWGSDSRKSIMEVIGEVFGKSKFPITFLNITQLSSYRRDAHTSI 382

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADC+HWC+PGLQDTWNELLFTKL YP+
Sbjct: 383 YKKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFTKLFYPY 428

[Close]

BLAST of CmoCh04G001230 vs. NCBI nr
Match: gi|449460876|ref|XP_004148170.1| (PREDICTED: protein trichome birefringence-like 33 [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 5.2e-87
Identity = 149/166 (89.76%), Postives = 161/166 (96.99%), Query Frame = 1


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           +GSFEDE QDIVELSTEDAYRMAMKSMLRWVRKNM+PKKTRVFFT+MSPSHGKSIDWGGE
Sbjct: 264 EGSFEDEVQDIVELSTEDAYRMAMKSMLRWVRKNMNPKKTRVFFTSMSPSHGKSIDWGGE 323

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           +G NCYNQTT+IED NYWGSDS+KS+M+VIGEVF +SKFPITFLNITQLSSYRRDAHTSI
Sbjct: 324 EGGNCYNQTTIIEDPNYWGSDSRKSIMEVIGEVFEKSKFPITFLNITQLSSYRRDAHTSI 383

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADC+HWC+PGLQDTWNELLFTKL YP+
Sbjct: 384 YKKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFTKLFYPY 429

[Close]

BLAST of CmoCh04G001230 vs. NCBI nr
Match: gi|255559543|ref|XP_002520791.1| (PREDICTED: protein trichome birefringence-like 33 [Ricinus communis])

HSP 1 Score: 312.8 bits (800), Expect = 3.9e-82
Identity = 141/165 (85.45%), Postives = 157/165 (95.15%), Query Frame = 1


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSF+DEA+DIVEL TEDAYRMAMKSM+RWVRKNM+PKKTRVFFT+MSPSHGKSIDWGGE
Sbjct: 257 QGSFDDEAKDIVELPTEDAYRMAMKSMIRWVRKNMNPKKTRVFFTSMSPSHGKSIDWGGE 316

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
             +NCYN+TTLI ++ YWGSDS+KS+M+VIGEVF +SKFPITFLNITQLS+YR+DAHTSI
Sbjct: 317 PDNNCYNETTLINNATYWGSDSRKSIMEVIGEVFRKSKFPITFLNITQLSNYRKDAHTSI 376

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYP 174
           YKKQWSPLTPEQLANPVSYADC+HWCMPGLQDTWNELLF KL YP
Sbjct: 377 YKKQWSPLTPEQLANPVSYADCVHWCMPGLQDTWNELLFAKLFYP 421

[Close]

BLAST of CmoCh04G001230 vs. NCBI nr
Match: gi|1012361909|gb|KYP73092.1| (hypothetical protein KK1_005705, partial [Cajanus cajan])

HSP 1 Score: 312.8 bits (800), Expect = 3.9e-82
Identity = 142/163 (87.12%), Postives = 156/163 (95.71%), Query Frame = 1


Query: 10  GSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGEQ 69
           GSF+DEA++IVELSTEDAYRMAMKSMLRWVR NMDPKKTRVFFT+MSPSHGKSIDWGGE+
Sbjct: 263 GSFDDEAKEIVELSTEDAYRMAMKSMLRWVRLNMDPKKTRVFFTSMSPSHGKSIDWGGEE 322

Query: 70  GDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSIY 129
           G NCYN+TTLI+D  YWGSD +KS+M+VIGEVFS++K PITFLNITQLSSYRRDAHTSIY
Sbjct: 323 GGNCYNETTLIDDPTYWGSDCRKSIMEVIGEVFSKTKVPITFLNITQLSSYRRDAHTSIY 382

Query: 130 KKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLY 173
           KKQWSPLTPEQLANPVSYADC+HWC+PGLQDTWNELLFTKL Y
Sbjct: 383 KKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFTKLFY 425

[Close]

BLAST of CmoCh04G001230 vs. NCBI nr
Match: gi|802546738|ref|XP_012086714.1| (PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas])

HSP 1 Score: 310.8 bits (795), Expect = 1.5e-81
Identity = 142/171 (83.04%), Postives = 160/171 (93.57%), Query Frame = 1


Query: 3   EMKFYRQGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKS 62
           +MK  R GSF+DEA+DIVE+ TEDAYRMAMKSM+RWVRKNM+P+KTRVFFT+MSPSHGKS
Sbjct: 253 KMKILR-GSFDDEAKDIVEIPTEDAYRMAMKSMMRWVRKNMNPRKTRVFFTSMSPSHGKS 312

Query: 63  IDWGGEQGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRR 122
           IDWGGE G NCYN+TTLI +S+YWGSD +KS+M+VIGEVF +SKFPITFLNITQLSSYR+
Sbjct: 313 IDWGGEPGLNCYNETTLITNSSYWGSDCRKSIMEVIGEVFGKSKFPITFLNITQLSSYRK 372

Query: 123 DAHTSIYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYP 174
           DAHTSIYKKQWSPLTPEQLANPVSYADC+HWC+PGLQDTWNELLF KL YP
Sbjct: 373 DAHTSIYKKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFAKLFYP 422

The following BLAST results are available for this feature:

BLAST of CmoCh04G001230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TBL33_ARATH	2.9e-77	79.27	Protein trichome birefringence-like 33 OS=Arabidopsis thaliana GN=TBL33 PE=2 SV=...	[more]
TBL32_ARATH	3.4e-70	72.29	Protein trichome birefringence-like 32 OS=Arabidopsis thaliana GN=TBL32 PE=2 SV=...	[more]
TBL3_ARATH	2.3e-42	48.77	Protein trichome birefringence-like 3 OS=Arabidopsis thaliana GN=TBL3 PE=2 SV=1	[more]
TBL31_ARATH	1.2e-38	42.86	Protein trichome birefringence-like 31 OS=Arabidopsis thaliana GN=TBL31 PE=2 SV=...	[more]
TBL35_ARATH	1.7e-37	42.69	Protein trichome birefringence-like 35 OS=Arabidopsis thaliana GN=TBL35 PE=2 SV=...	[more]

BLAST of CmoCh04G001230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM73_CUCSA	3.6e-87	89.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G217170 PE=4 SV=1	[more]
B9S472_RICCO	2.7e-82	85.45	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0687400 PE=4 SV=1	[more]
A0A151U187_CAJCA	2.7e-82	87.12	Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_005705 PE=4 SV=1	[more]
A0A067LJA3_JATCU	1.0e-81	83.04	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01200 PE=4 SV=1	[more]
D7T4I9_VITVI	1.0e-81	83.04	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01930 PE=4 SV=...	[more]

BLAST of CmoCh04G001230 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40320.1	1.6e-78	79.27	TRICHOME BIREFRINGENCE-LIKE 33	[more]
AT3G11030.1	1.9e-71	72.29	TRICHOME BIREFRINGENCE-LIKE 32	[more]
AT5G01360.1	1.3e-43	48.77	Plant protein of unknown function (DUF828)	[more]
AT1G73140.1	6.6e-40	42.86	Plant protein of unknown function (DUF828)	[more]
AT5G01620.3	9.6e-39	42.69	TRICHOME BIREFRINGENCE-LIKE 35	[more]

BLAST of CmoCh04G001230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109721\|ref\|XP_008454841.1\|	3.0e-87	90.36	PREDICTED: protein trichome birefringence-like 33 [Cucumis melo]	[more]
gi\|449460876\|ref\|XP_004148170.1\|	5.2e-87	89.76	PREDICTED: protein trichome birefringence-like 33 [Cucumis sativus]	[more]
gi\|255559543\|ref\|XP_002520791.1\|	3.9e-82	85.45	PREDICTED: protein trichome birefringence-like 33 [Ricinus communis]	[more]
gi\|1012361909\|gb\|KYP73092.1\|	3.9e-82	87.12	hypothetical protein KK1_005705, partial [Cajanus cajan]	[more]
gi\|802546738\|ref\|XP_012086714.1\|	1.5e-81	83.04	PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026057	PC-Esterase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G001230.1	CmoCh04G001230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026057	PC-Esterase	PFAM	PF13839	PC-Esterase	coord: 7..168 score: 1.0
None	No IPR available	PANTHER	PTHR32285:SF62	PROTEIN TRICHOME BIREFRINGENCE-LIKE 33	coord: 1..172 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G001230	Lsi04G010600	Bottle gourd (USVL1VR-Ls)	cmolsiB663
CmoCh04G001230	Cp4.1LG01g05460	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G001230	Cp4.1LG01g11430	Cucurbita pepo (Zucchini)	cmocpeB674
CmoCh04G001230	MELO3C018390.2	Melon (DHL92) v3.6.1	cmomedB722
CmoCh04G001230	CsaV3_5G010540	Cucumber (Chinese Long) v3	cmocucB0873
CmoCh04G001230	Cla97C07G133090	Watermelon (97103) v2	cmowmbB755
CmoCh04G001230	Bhi07G000464	Wax gourd	cmowgoB0889
CmoCh04G001230	CsGy5G008420	Cucumber (Gy14) v2	cgybcmoB652
CmoCh04G001230	Carg24498	Silver-seed gourd	carcmoB1219
CmoCh04G001230	Carg00197	Silver-seed gourd	carcmoB0924

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G001230	CmoCh04G011590	Cucurbita moschata (Rifu)	cmocmoB464

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G001230	Wax gourd	cmowgoB0884
CmoCh04G001230	Cucurbita moschata (Rifu)	cmocmoB187
CmoCh04G001230	Cucumber (Gy14) v1	cgycmoB0401
CmoCh04G001230	Cucurbita maxima (Rimu)	cmacmoB239
CmoCh04G001230	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G001230	Cucurbita maxima (Rimu)	cmacmoB731
CmoCh04G001230	Wild cucumber (PI 183967)	cmocpiB747
CmoCh04G001230	Wild cucumber (PI 183967)	cmocpiB692
CmoCh04G001230	Cucumber (Chinese Long) v2	cmocuB678
CmoCh04G001230	Cucumber (Chinese Long) v2	cmocuB737
CmoCh04G001230	Melon (DHL92) v3.5.1	cmomeB635
CmoCh04G001230	Melon (DHL92) v3.5.1	cmomeB661
CmoCh04G001230	Watermelon (Charleston Gray)	cmowcgB649
CmoCh04G001230	Watermelon (Charleston Gray)	cmowcgB676
CmoCh04G001230	Watermelon (97103) v1	cmowmB669
CmoCh04G001230	Watermelon (97103) v1	cmowmB685
CmoCh04G001230	Cucurbita pepo (Zucchini)	cmocpeB695
CmoCh04G001230	Bottle gourd (USVL1VR-Ls)	cmolsiB639
CmoCh04G001230	Cucumber (Gy14) v2	cgybcmoB125
CmoCh04G001230	Cucumber (Chinese Long) v3	cmocucB0806
CmoCh04G001230	Watermelon (97103) v2	cmowmbB721