CmoCh04G000210 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATATAAACCGTGTTTAATATCTATTTTGTTCTCTATTTAAATTTCGTACCGGCTTCATCGATGGCGCGTGTTTATGAGAGAGGGATACATGGAGAAGCAGCAGTCGCCTCGCCTTAAAGGATTTCATTCGATTATTGTTGCAAATTGGGATATCGCTTTCGGTAATTCTCTCTCCAAAACCTGTAATCCCCAATTGACTCTCCTTAATATTATAGGAATACTTAGAATCCTTTCTCAAACAGCACAGTTGAACATTGTTTTATATATGTCACACAAATCGTTGTATCTTTGTATATGTTGAAGGTATATTTTTATGGTCAAGGGCATTCCATCCGATTACTGCCATTGAAACGAGAGACAGAGAATTGGATGAAAATGGGAGACGAAGCGGAGATCAATCAGCGGCGGCGTCTCCCTCTGGAAAATTTCTTAACCCTCGAAGAATGCAGGGAACTGGAGTTCATCCATAAGAGCTGCTGTACGGTGGGTTATAGACCATACGTCTTCTCCACCACTCTTTTGCATCTTGTTGTCTCTAATTCTGCTCATTTGATCATGCCTTTTGTTTCGATTAGAGGTATGACCACCCATTCCTCCATTTTCTCCATTTTTTCCTTTTTTGTAATGTTTATGCCTAATTTTGATTAGAGTTCAATATTTGTGACAGAGCGGTTGAAGGAGAAAGCGGAGGAGTTCTTTGGCTGTGAATATGAGCTCTTCGTCGAGTTCACTGGCTTGATAAGGTTATTCTTTTTCCTCCTTATGTGTTTAAGGCTTAAATGGGTGTTGTCTCTTTTTGCGTAAACCCCAAAATTTGAAGAATGAACATAGGGAGTAAGACGGCCATAAATTAGAAGGCTGAGTCTTTCTTTGTCATTGAAATCGTCTATATGGTTACCTTTAGTTCAGGGAGTCTGACGGCCATGTTACTGGAGTACTTTATAATCAGCCCAGTCTGGTATGGGCCTTCGCAGGTTGGTTCTTGTGATCCACGGTTTAATTTCTGTGTGTTTAGCATGACCCGTGGAAGGACTAAATCTTGGAATTTCAACGACTTACCCAGACCTGAATACATAAAAAGTTCAAAATCTTGCTTCATAGTTTGTAACAGTGATTGGTTCTTCCTAAAAACATGATTACCTTTTCAAAAATACTTGCAATAATACTGCGTTGGTTGAATGCCATTACAACCGTTTCTTTTGAATATTTGGATAGAAAGGAATAAAAGAAATTCTCAAGATTGATACAAAAATCATAGTGAAATTTGGGATTCATTCTATCTTGTTTTTTTTTATTCACTTGGGAGTGTTCTTTTCTTTCTTGTTCTGGCAATCTCATTTGTGATTAATGTCTATATATTTTTCAATGAAATATCTTTCTTTTCGCTCTCTTTTGTGAACTATATAGAATACTTCATTTGATTTACTTTTCATTTTTAAAAAAAGTGTAGTAGAATCTGTATTTTTCTTCTAACATTCTGTCGTAGTTCAGCTGGACCAGGGGAGCAAGGATTGGATGGCATAGTGACGACAACCGGCCCTATCTAAAACAACGTGAATTTACAGTATGTGGACCAATTTTTCCTGGGAAAGTCAGATGTCATTTGTTGCTATCCCTTCGACAACCTATTCTTTCATTTCAATTGTAGTTTTATATCCTTTTTATTCTCTCTTGGACTTCTTTTCTGTTTTTCTTTCTGACAAGGGGGAGGGTGGTTCAATTCCTATAGTACCTTCTCCCTGAAATTCATTTGGTATTTCTTCTCCATCATTACAGTACTCTAGCTGATGGTTGTCTTCGTGTATTTGGCAAAAGGCAGTGTGTTACTTGAATAGTTATGGAGTAGATTTCGAAGGTGGGCTGTTTCACTTTCAGGACGGGGAACCAAAAACTATCTCGCCTCTTTGTGGAGTAAGTTGATTGATAAAAGCTTTTGACCTCTTCCATTTATTTTACTCGGTACATACAGCACTTTTTCTTATAAAAAAAATTGTACATTTCTATGTTTTTTCTATGTTTTGCAACATGATTGTAGCTCAATTGGTTAAGACATTAAAAGGCGGAGGTTCAAATCTCATCCTCACATATTGTAGAACTCGAAAATGGTACATATGCTTCTTTGAAGGATGTGCTTGTGCTCTTTTGCGCGAAGCAATCTTCAGTATTTTTTGGTCAATAGAAATAATAAGTGGAATTTAATCCTCGGCAGTATGAATTATAACCCATGTTTCATTGCTGTTCTTATAGTTCCCTTTCTAATTATTTTAGTAATTATGCCTTCTTTGTAAATTATAATTAATTCTAATTGTGGGGATATTCTATAAGAACGTTTGACTTTGATGTAAATGGAGACGAGTCATGCAGAAAAGGGCATCTTCTCTGAATTGTTGGATTTCGGTGATAGGTTTTTAGTTCATTTATCTATATCAATGAAAAGTTGTTTTTCCTCTTACAAGAAATGCCATATTAGTCTGAATAATTGAAGGTGGTGGATTATATTTGCTAGTAGTTTGAAACAATGTACCAATCAAGTATAGTTAATACATGTTTCGCTTTATCAGGATTGTGTGATGTACACGGCTGACAGCCTCAATGTTCATTCTGTTGATGAGGTATGTCCAAACACTCTGGCCCTCTGAATCTGCATGTGAAATCATTGTTTAAATGAATAACATCAAATCTCTCCCATGGTTCTTTGAGGAATAATCTAACTTTCATTGAGAAGAAATGAAACAATACAAGTTATATAAAATTAAAGCCTACAAATGGGAGTCAAACTATATAAAAAAAGGCTTCAATCCAGTAAAATAAGATCAAAGGGTAATTCAAAAAAGCCTCGTCATCGAAGCCGATAGAGAGCACATTAATTCTTTCTTGCTGTTTTTCTTTTACTGTAACTGAGGAATCATGCATGTTGATTAATCCTCAAGAGAGTCGCCAGTAGCCCTCTCGTAGACAGCTGTACTTCATCTTGCTTACCACGTGGTTTCCTTGGATAGGTAACCAGTGGAGAAAGACTTACGCTGACATTATGGTTCACCCGTGATAGTTCCCATGATGAAGATGCAAAACTTGTTTCCCTTCTTTCACAAAGCCATTTACACGATCGTCTTCCTGACTCATGCCTACCTCAGCCTCCATCCTGTAATATGTATTGGTTTTCACCAAAAGACGATCCAAATTTCAAGTTCGGTTTTGATATATGTTGGGCAAGACTGCATGCGCTAGGATACGGCATTTATTTTCCTCAGGACCATAGTTTGTCAGAGTATCCAGATTTATTCTCACAGGATGTACAATTAGTACGTGGTAATAAGATCTTCTCTCAGAAGTTTGATAGCATTTTGCATGCACTTCAGGTATTCCGTCGAAATCACCCTCAACATTAGTCCCCCTTGTGATTATATAGCAGAATCTAGTCGTTTTTCACGTAACGAGAAAAAAAAAGTTGTCATATTCAGAATCGTCAAATACTATGATTAATTCACTTCGTTTTATGTAGTTTCCTCATTGAAAAAGTCTGCTAAAACGAGTTACCTACACCTGCTTAAACAGGTAGTGCAATTTCTATATTGGAAAGGCAAAGAATTGGATTCTACTAACTCCAAGGAAGATTCAAGCTATGCAGAAGGTTTATCTCCAAAGAGAAATGTGGGAGTCGATTACTTTAAATCCGAGTTCTCAAAGGACGATGCACTGGCGGAGTCAGTCTTCTTGTATGCTAGTTCTGATGTCAAGGAGAAGCAACACCGGTTGGGGTGGGCTAAGCTTGCTGCAGTAGCAGCAGCTTGGGAAGATTATGCTTCCAATTTAAGGAGAGAACTCCTTCGGAGCTTCGCCCATTGGAGAACCAGTCAATCCATATACAGTGTTCCATATGGTAGTTGACTCTTCCACTTCTGGGATAGTGGCAGTCTCAAATGCTAAAAGTAGCTGAGCTTCAAGGTTAGTTATGGGCCTTTGTACAGCTTAACTAGATTTTACTTGTCCCAAGTGTGCAATCCTTTGTGTTATATTCTTACCCTTTTCAACGATTTAGCCATTTTTCACAGTTTTTAAAGGG TATATAAACCGTGTTTAATATCTATTTTGTTCTCTATTTAAATTTCGTACCGGCTTCATCGATGGCGCGTGTTTATGAGAGAGGGATACATGGAGAAGCAGCAGTCGCCTCGCCTTAAAGGATTTCATTCGATTATTGTTGCAAATTGGGATATCGCTTTCGGTATATTTTTATGGTCAAGGGCATTCCATCCGATTACTGCCATTGAAACGAGAGACAGAGAATTGGATGAAAATGGGAGACGAAGCGGAGATCAATCAGCGGCGGCGTCTCCCTCTGGAAAATTTCTTAACCCTCGAAGAATGCAGGGAACTGGAGTTCATCCATAAGAGCTGCTGTACGGTGGGTTATAGACCATACGTCTTCTCCACCACTCTTTTGCATCTTGTTGTCTCTAATTCTGCTCATTTGATCATGCCTTTTGTTTCGATTAGAGAGCGGTTGAAGGAGAAAGCGGAGGAGTTCTTTGGCTGTGAATATGAGCTCTTCGTCGAGTTCACTGGCTTGATAAGTTCAGGGAGTCTGACGGCCATGTTACTGGAGTACTTTATAATCAGCCCAGTCTGGTATGGGCCTTCGCAGTTCAGCTGGACCAGGGGAGCAAGGATTGGATGGCATAGTGACGACAACCGGCCCTATCTAAAACAACGTGAATTTACAGCAGTGTGTTACTTGAATAGTTATGGAGTAGATTTCGAAGGTGGGCTGTTTCACTTTCAGGACGGGGAACCAAAAACTATCTCGCCTCTTTGTGGAGATTGTGTGATGTACACGGCTGACAGCCTCAATGTTCATTCTGTTGATGAGGTAACCAGTGGAGAAAGACTTACGCTGACATTATGGTTCACCCGTGATAGTTCCCATGATGAAGATGCAAAACTTGTTTCCCTTCTTTCACAAAGCCATTTACACGATCGTCTTCCTGACTCATGCCTACCTCAGCCTCCATCCTGTAATATGTATTGGTTTTCACCAAAAGACGATCCAAATTTCAAGTTCGGTTTTGATATATGTTGGGCAAGACTGCATGCGCTAGGATACGGCATTTATTTTCCTCAGGACCATAGTTTGTCAGAGTATCCAGATTTATTCTCACAGGATGTACAATTAGTACGTGGTAATAAGATCTTCTCTCAGAAGTTTGATAGCATTTTGCATGCACTTCAGGTAGTGCAATTTCTATATTGGAAAGGCAAAGAATTGGATTCTACTAACTCCAAGGAAGATTCAAGCTATGCAGAAGGTTTATCTCCAAAGAGAAATGTGGGAGTCGATTACTTTAAATCCGAGTTCTCAAAGGACGATGCACTGGCGGAGTCAGTCTTCTTGTATGCTAGTTCTGATGTCAAGGAGAAGCAACACCGGTTGGGGTGGGCTAAGCTTGCTGCAGTAGCAGCAGCTTGGGAAGATTATGCTTCCAATTTAAGGAGAGAACTCCTTCGGAGCTTCGCCCATTGGAGAACCAGTCAATCCATATACAGTGTTCCATATGGTAGTTGACTCTTCCACTTCTGGGATAGTGGCAGTCTCAAATGCTAAAAGTAGCTGAGCTTCAAGGTTAGTTATGGGCCTTTGTACAGCTTAACTAGATTTTACTTGTCCCAAGTGTGCAATCCTTTGTGTTATATTCTTACCCTTTTCAACGATTTAGCCATTTTTCACAGTTTTTAAAGGG ATGAAAATGGGAGACGAAGCGGAGATCAATCAGCGGCGGCGTCTCCCTCTGGAAAATTTCTTAACCCTCGAAGAATGCAGGGAACTGGAGTTCATCCATAAGAGCTGCTGTACGGTGGGTTATAGACCATACGTCTTCTCCACCACTCTTTTGCATCTTGTTGTCTCTAATTCTGCTCATTTGATCATGCCTTTTGTTTCGATTAGAGAGCGGTTGAAGGAGAAAGCGGAGGAGTTCTTTGGCTGTGAATATGAGCTCTTCGTCGAGTTCACTGGCTTGATAAGTTCAGGGAGTCTGACGGCCATGTTACTGGAGTACTTTATAATCAGCCCAGTCTGGTATGGGCCTTCGCAGTTCAGCTGGACCAGGGGAGCAAGGATTGGATGGCATAGTGACGACAACCGGCCCTATCTAAAACAACGTGAATTTACAGCAGTGTGTTACTTGAATAGTTATGGAGTAGATTTCGAAGGTGGGCTGTTTCACTTTCAGGACGGGGAACCAAAAACTATCTCGCCTCTTTGTGGAGATTGTGTGATGTACACGGCTGACAGCCTCAATGTTCATTCTGTTGATGAGGTAACCAGTGGAGAAAGACTTACGCTGACATTATGGTTCACCCGTGATAGTTCCCATGATGAAGATGCAAAACTTGTTTCCCTTCTTTCACAAAGCCATTTACACGATCGTCTTCCTGACTCATGCCTACCTCAGCCTCCATCCTGTAATATGTATTGGTTTTCACCAAAAGACGATCCAAATTTCAAGTTCGGTTTTGATATATGTTGGGCAAGACTGCATGCGCTAGGATACGGCATTTATTTTCCTCAGGACCATAGTTTGTCAGAGTATCCAGATTTATTCTCACAGGATGTACAATTAGTACGTGGTAATAAGATCTTCTCTCAGAAGTTTGATAGCATTTTGCATGCACTTCAGGTAGTGCAATTTCTATATTGGAAAGGCAAAGAATTGGATTCTACTAACTCCAAGGAAGATTCAAGCTATGCAGAAGGTTTATCTCCAAAGAGAAATGTGGGAGTCGATTACTTTAAATCCGAGTTCTCAAAGGACGATGCACTGGCGGAGTCAGTCTTCTTGTATGCTAGTTCTGATGTCAAGGAGAAGCAACACCGGTTGGGGTGGGCTAAGCTTGCTGCAGTAGCAGCAGCTTGGGAAGATTATGCTTCCAATTTAAGGAGAGAACTCCTTCGGAGCTTCGCCCATTGGAGAACCAGTCAATCCATATACAGTGTTCCATATGGTAGTTGA
BLAST of CmoCh04G000210 vs. Swiss-Prot
Match: P3H1_CHICK (Prolyl 3-hydroxylase 1 OS=Gallus gallus GN=P3H1 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 6.4e-14 Identity = 73/273 (26.74%), Postives = 117/273 (42.86%), Query Frame = 1
BLAST of CmoCh04G000210 vs. Swiss-Prot
Match: P3H1_RAT (Prolyl 3-hydroxylase 1 OS=Rattus norvegicus GN=P3h1 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.1e-11 Identity = 59/230 (25.65%), Postives = 106/230 (46.09%), Query Frame = 1
BLAST of CmoCh04G000210 vs. Swiss-Prot
Match: P3H1_MOUSE (Prolyl 3-hydroxylase 1 OS=Mus musculus GN=P3h1 PE=1 SV=2) HSP 1 Score: 67.8 bits (164), Expect = 3.3e-10 Identity = 55/227 (24.23%), Postives = 102/227 (44.93%), Query Frame = 1
BLAST of CmoCh04G000210 vs. Swiss-Prot
Match: P3H2_CHICK (Prolyl 3-hydroxylase 2 OS=Gallus gallus GN=P3H2 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 5.6e-10 Identity = 63/248 (25.40%), Postives = 108/248 (43.55%), Query Frame = 1
BLAST of CmoCh04G000210 vs. Swiss-Prot
Match: P3H1_HUMAN (Prolyl 3-hydroxylase 1 OS=Homo sapiens GN=P3H1 PE=1 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 1.6e-09 Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 1
BLAST of CmoCh04G000210 vs. TrEMBL
Match: A0A0A0KMN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G289640 PE=4 SV=1) HSP 1 Score: 665.6 bits (1716), Expect = 4.0e-188 Identity = 330/421 (78.38%), Postives = 350/421 (83.14%), Query Frame = 1
BLAST of CmoCh04G000210 vs. TrEMBL
Match: V4UGA2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015473mg PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 1.0e-127 Identity = 233/414 (56.28%), Postives = 282/414 (68.12%), Query Frame = 1
BLAST of CmoCh04G000210 vs. TrEMBL
Match: F6HFA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g06280 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 5.1e-127 Identity = 233/429 (54.31%), Postives = 288/429 (67.13%), Query Frame = 1
BLAST of CmoCh04G000210 vs. TrEMBL
Match: M5Y3D7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017932mg PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 5.1e-127 Identity = 236/419 (56.32%), Postives = 284/419 (67.78%), Query Frame = 1
BLAST of CmoCh04G000210 vs. TrEMBL
Match: A0A067F0I4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015648mg PE=4 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 5.6e-126 Identity = 231/414 (55.80%), Postives = 279/414 (67.39%), Query Frame = 1
BLAST of CmoCh04G000210 vs. TAIR10
Match: AT1G68080.1 (AT1G68080.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 406.0 bits (1042), Expect = 2.9e-113 Identity = 214/410 (52.20%), Postives = 267/410 (65.12%), Query Frame = 1
BLAST of CmoCh04G000210 vs. NCBI nr
Match: gi|700195676|gb|KGN50853.1| (hypothetical protein Csa_5G289640 [Cucumis sativus]) HSP 1 Score: 665.6 bits (1716), Expect = 5.7e-188 Identity = 330/421 (78.38%), Postives = 350/421 (83.14%), Query Frame = 1
BLAST of CmoCh04G000210 vs. NCBI nr
Match: gi|449445405|ref|XP_004140463.1| (PREDICTED: prolyl 3-hydroxylase 1 [Cucumis sativus]) HSP 1 Score: 659.8 bits (1701), Expect = 3.1e-186 Identity = 327/421 (77.67%), Postives = 346/421 (82.19%), Query Frame = 1
BLAST of CmoCh04G000210 vs. NCBI nr
Match: gi|659113939|ref|XP_008456831.1| (PREDICTED: uncharacterized protein LOC103496668 isoform X1 [Cucumis melo]) HSP 1 Score: 657.5 bits (1695), Expect = 1.6e-185 Identity = 327/422 (77.49%), Postives = 347/422 (82.23%), Query Frame = 1
BLAST of CmoCh04G000210 vs. NCBI nr
Match: gi|659113941|ref|XP_008456833.1| (PREDICTED: uncharacterized protein LOC103496668 isoform X2 [Cucumis melo]) HSP 1 Score: 580.5 bits (1495), Expect = 2.4e-162 Identity = 300/422 (71.09%), Postives = 318/422 (75.36%), Query Frame = 1
BLAST of CmoCh04G000210 vs. NCBI nr
Match: gi|645228334|ref|XP_008220946.1| (PREDICTED: uncharacterized protein LOC103320983 [Prunus mume]) HSP 1 Score: 472.2 bits (1214), Expect = 9.2e-130 Identity = 240/422 (56.87%), Postives = 288/422 (68.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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