CmaCh04G000200 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTAAATATATAAACATATCATGTTTAATATCTATTTTGTTCTCTATTTAAATTTTGTACCGGCTTCTCATCGATGGCGCGTGTTTACGAGAGAGGGATGCATGGAGAAGAAGCAGTCGCCTCGCCATTAAGGATTTCATTCCATTGTTGTTGCAAATTGGGATATCGCTTTCGGTAATTCTCTCTCCAAAACCTGTAATCCCCAATTGACTCTCCTTAATATTATAGTAATCCTTAGAATCATTCTCAAACAGCACAGTTGAACATTGTTTTATATATGTCACACAAATCGTTGTATCTTTGTATATGTTGAAGGTATATTTTTATGGTCAAGGGCATTCCATCCGATTAATGCCATTGAAACGAGAGACGGAGAATTGGATGAAAATGGGAGACGAAGCGGAGATCAATCAGCGGTGGCGTCTCATTCTGGAAAATTTCTTAACCCTCGAAGAATGCAGGGAACTGGAGTTCATCCATAAGAGCTGCTGTACGGTGGGTTATAGACCATACGTCTTCTCCACCACTCTTTTGCATCTTGTTGTCTCTAATTCTGCTCAATTGATCATGCCTTTTGTTTCGATTAGAGGTATGACCACCCATTCCTCCATTTTCTCCATTTTTTCCTTTTTGGTAATGTTTATGCCTAATTTTGATTAGAGTTCAATATTTGTGACAGAGCGGTTGAAGGAGAAAGCGGAGGAGTTCTTTGGCTGTGAATATGAGCTCTTCGTCGAGTTCACTGGCTTGATAAGGTTATTCTTTTTCCTCCTTATGTGTTAAAGGCTTAAATGGGTGTTAGTCTCTTCTTGCGTAAACCCCAAATTTTGAAGAATGAACATAGAGAGTCAGACGGCCATAAATTAGAAGGCTGAGTCTTTCTTTGTCATTGAAAATCGTCTATATGGTTAACTTTAGTTCAGGGAGTCTGACGGCCATGTAACAGGAGTACGTTATAATCAGCCCAGTCTGGTATGGGCCTTCGCAGGTTGGTTCTTGTGATCCACGGTTTAATTTCTGTGTGTTTAGTATGACCCGTGGAAGGACTAAATCTTGGAATTTCAACGACTTACCTAGACCCGAATACATAAAAAGTTCAAAATCTTGCTTCATAGTTTGTAACAGTGATTGGTTCTTCCTCAAAAATACTTGCAATAATACTGGGTTGGTTGAATGCCATTACAACCGTTTCTTTTGAATATTTGGATAGAATGGAATAAAAGAAATTCTCAAGATTGATACAAAAATCATTGTGAAATTTGGGATTCATTCTATCTTGTTTTTTTTTATTCACTTGGGAGTGTTCTTTTCTTTCTTGTTCTGGCAATCTCATTTGTGATTAATGTCTATATATTTTTCAATGAAATATCTTTTTTTTCGCTCTCTTTTGTGAACTATATAGAATACTTCATTTGATTTAATTTTCATTTTCAAAAAAAAGTGTAGTAGAATCTGTATTTTTCTTCTAACATTCTGTCGTAGTTCAGCTGGACCAGGGGAGCAAGGATTGGATGGCATAGTGACGACAACCGGCCCTATCTAAAACAACGTGAATTTACAGTATGTGGACCAATCTTTCCTGGGAAAGTCAGATGTCATTTTTTGCTATCCCTTCGACAACCTATTCTTTCATTTCAATTGTAGTTTTATATCCTTTTTATTCTCTCTTGGACTTCTTTTCTGTTTTTCTTTCTGACAAGGGGGAGGGTGGTTCAATTCCTATAGTACCTTCTCCCTGAAATTCATTTGGTATTTCTTCTCCATCATTACAGTACTCTAGCTGATGGTTGTCTTCGTGTATTTGGCAAAAGGCAGTGTGTTACTTGAATAGTTATGGAGTAGATTTCGAAGGTGGGCTGTTTCACTTTCAGGACGGGGAACCAAAAACTATCTCGCCTCTTTGTGGAGTAAGTTGATTGATAAAAGCTTTTTACCTCTTCCATTTATTTTACTCGGTACATACAGCAATTTTTCTAATAAAAAAAATTGTACATTTCTATGTTTGTCAACATGAATGTAGTTCAATTGGTTAAGACATTAAAACCTCAATTGAAAGGTGGAGGTTCAAATCTCATCCTCTCATATTGTAGAACTCGAAAATGGTACATATGCTTCTTTGAAGGATGTGCTTGTGCTCTTTTGAGCGAAGCAATCTTCAGTATTTTTTGGTCAATAGAAATAATAAGTGGAGCTTAATCCTCGGCAGTATGAATTATAGCCCATGTTTCATTGCTGTTCTTATAGTTCCCTTTCTAATTATTTTAGTAATTATGCCTTCTTTGTAAATTATAATTAATTCTAATTGTGGGGATATTCTATAAGAACGTTTGACTTTGATGTAAATGGAGATGAGTCATGCAGAAAAGGGCATTTTCTCTGAATTGTTGGATTTCGGTGATAGGTTTTTAGTTCATTTATCTATATCAATGAAAAGTTGTTTTTCCTCTTACAAGAAATGCCATATTTGTCTGAATAATTGAAGGTGGTGGATTATATTTGCTAGTAGTTTGAAACAATGTACCAATCAAGTATAGTTAATACATGTTTTGCTTTATCAGGATTGTGTGATGTACACGGCTGACAGCCTCAATGTTCATTCTGTTGATGAGGTATGTCCAAACACTCTGTCCCTCTGAATCTGCATGTGAAATCATTGTTTAAATGAATAACATCAAATCTCTCCCATGGTTCTTTGAGGAATAATCTAACTTTTATTGAGAGGAAATGAAACAATACAAGGAATATAAAATTAAAGCCGACAAATGGAAGTCAAACTATATAAAAAAAGGCTTCAATCCAGTAAAATAAGATCAAAGGGTAATTCAAAAAAGCCTCGTCATCGAAGCCGAGAGAGAGCACATTAATTCTTTCTTGCTGTTTTTCTTTTACTGTAATTGAGGGATCATGCATGTTGATTAATCCTCAAGAGAGTCGCTAGTAGCCCTCTCGTAGACAGCTGTACTTCATCTTGCTTACCACGTGGTTTCCTTGGATAGGTAACCAGTGGAGAAAGACTTACGCTGACATTATGGTTCACCCGTGATAGTTCCCATGATGAAGATGCAAAACTTCTTTCCCTTCTTTCACAAAGCCATTTACACGATCGTCTTCCTGACTCATGCCTACCTCAGCCTCCATCCTGTAATATGTATTGGTTTTCACCAAAAGACGATCCAAATTTCAAGTTCGGTTTTGATATATGTTGGGCAAGACTGCATGCGCTAGGATACGGCATTTATTTTCCTCAGGACCATAGTTTGTCAGAGTATCCAGATTTATTCTCACAGGATGTACAATTAGTACGGGGTAATAAGATCTTCTCTCAGAAGTTTGATAGCATTTTGCATGCACTTCAGGTATTCCGTCGAAATCACCCTCAACATTATTCCCCCTTGTGATTATATAGCAGAATCTGGTCGTTTTTCACGTAACGAGAAAAAAAAAGTTGTCATATTCAGAATCGTCAAATACTATAATTAATTCACTTCGTTTTATGTAGTTTCCTCATTGAAAAAGTCTGCTAAAACGAGTTACCTACACCTGCTTAAACAGGTAGTGCAATTTCTATATTGGAAAGGCAAAGAATTGGATTCTACTGACTCCAAGGAAGATTCAAGCTATGCAGAAGGTTTATCTCCAAAGAGAAATGTGGGAGTCGATTTCTTTAAATCCGAGTTCTCAAAGGACGATGCACTGGCGGAGTCAGTCTTCTTGTATGCTAGTTCTGATGTCAAGGAGAAGCAACACCGGTTGGGGTGGGCTAAGCTTGCTGCAGTAGCAGAAGCTTGGGAAGATTATGCTTCCAATTTAAGGAGAGAACTCCTTCGGAGCTTCGCCCATTGGAGAACCAGTCAATCCATATACAGTGTTCCATATGGTAGTTGACTCTTCCACTTCTGGGATAGTGGCAGTCTCAAATGCTAGAAGTAGCTGAGCTTCAAGGTCAGTTATGGGCCTTTGTACAGCTTAACTAGATTTTACTTGTCCCAAGTGTGCAATCCTTTGTGTTATATTCTTACCCTTTTCAACGATTTAGCCATTTTTCACCGTTTTTAAAGGGATATCATTTCTGTTTCTAAAAAACTTGGTTCTCGTTTTAGTGTCTTAGTATCTGTCT TTTTTTTTTAAATATATAAACATATCATGTTTAATATCTATTTTGTTCTCTATTTAAATTTTGTACCGGCTTCTCATCGATGGCGCGTGTTTACGAGAGAGGGATGCATGGAGAAGAAGCAGTCGCCTCGCCATTAAGGATTTCATTCCATTGTTGTTGCAAATTGGGATATCGCTTTCGGTATATTTTTATGGTCAAGGGCATTCCATCCGATTAATGCCATTGAAACGAGAGACGGAGAATTGGATGAAAATGGGAGACGAAGCGGAGATCAATCAGCGGTGGCGTCTCATTCTGGAAAATTTCTTAACCCTCGAAGAATGCAGGGAACTGGAGTTCATCCATAAGAGCTGCTGTACGGTGGGTTATAGACCATACGTCTTCTCCACCACTCTTTTGCATCTTGTTGTCTCTAATTCTGCTCAATTGATCATGCCTTTTGTTTCGATTAGAGAGCGGTTGAAGGAGAAAGCGGAGGAGTTCTTTGGCTGTGAATATGAGCTCTTCGTCGAGTTCACTGGCTTGATAAGCTGGACCAGGGGAGCAAGGATTGGATGGCATAGTGACGACAACCGGCCCTATCTAAAACAACGTGAATTTACAGCAGTGTGTTACTTGAATAGTTATGGAGTAGATTTCGAAGGTGGGCTGTTTCACTTTCAGGACGGGGAACCAAAAACTATCTCGCCTCTTTGTGGAGATTGTGTGATGTACACGGCTGACAGCCTCAATGTTCATTCTGTTGATGAGGTAACCAGTGGAGAAAGACTTACGCTGACATTATGGTTCACCCGTGATAGTTCCCATGATGAAGATGCAAAACTTCTTTCCCTTCTTTCACAAAGCCATTTACACGATCGTCTTCCTGACTCATGCCTACCTCAGCCTCCATCCTGTAATATGTATTGGTTTTCACCAAAAGACGATCCAAATTTCAAGTTCGGTTTTGATATATGTTGGGCAAGACTGCATGCGCTAGGATACGGCATTTATTTTCCTCAGGACCATAGTTTGTCAGAGTATCCAGATTTATTCTCACAGGATGTACAATTAGTACGGGGTAATAAGATCTTCTCTCAGAAGTTTGATAGCATTTTGCATGCACTTCAGGTAGTGCAATTTCTATATTGGAAAGGCAAAGAATTGGATTCTACTGACTCCAAGGAAGATTCAAGCTATGCAGAAGGTTTATCTCCAAAGAGAAATGTGGGAGTCGATTTCTTTAAATCCGAGTTCTCAAAGGACGATGCACTGGCGGAGTCAGTCTTCTTGTATGCTAGTTCTGATGTCAAGGAGAAGCAACACCGGTTGGGGTGGGCTAAGCTTGCTGCAGTAGCAGAAGCTTGGGAAGATTATGCTTCCAATTTAAGGAGAGAACTCCTTCGGAGCTTCGCCCATTGGAGAACCAGTCAATCCATATACAGTGTTCCATATGGTAGTTGACTCTTCCACTTCTGGGATAGTGGCAGTCTCAAATGCTAGAAGTAGCTGAGCTTCAAGGTCAGTTATGGGCCTTTGTACAGCTTAACTAGATTTTACTTGTCCCAAGTGTGCAATCCTTTGTGTTATATTCTTACCCTTTTCAACGATTTAGCCATTTTTCACCGTTTTTAAAGGGATATCATTTCTGTTTCTAAAAAACTTGGTTCTCGTTTTAGTGTCTTAGTATCTGTCT ATGCCATTGAAACGAGAGACGGAGAATTGGATGAAAATGGGAGACGAAGCGGAGATCAATCAGCGGTGGCGTCTCATTCTGGAAAATTTCTTAACCCTCGAAGAATGCAGGGAACTGGAGTTCATCCATAAGAGCTGCTGTACGGTGGGTTATAGACCATACGTCTTCTCCACCACTCTTTTGCATCTTGTTGTCTCTAATTCTGCTCAATTGATCATGCCTTTTGTTTCGATTAGAGAGCGGTTGAAGGAGAAAGCGGAGGAGTTCTTTGGCTGTGAATATGAGCTCTTCGTCGAGTTCACTGGCTTGATAAGCTGGACCAGGGGAGCAAGGATTGGATGGCATAGTGACGACAACCGGCCCTATCTAAAACAACGTGAATTTACAGCAGTGTGTTACTTGAATAGTTATGGAGTAGATTTCGAAGGTGGGCTGTTTCACTTTCAGGACGGGGAACCAAAAACTATCTCGCCTCTTTGTGGAGATTGTGTGATGTACACGGCTGACAGCCTCAATGTTCATTCTGTTGATGAGGTAACCAGTGGAGAAAGACTTACGCTGACATTATGGTTCACCCGTGATAGTTCCCATGATGAAGATGCAAAACTTCTTTCCCTTCTTTCACAAAGCCATTTACACGATCGTCTTCCTGACTCATGCCTACCTCAGCCTCCATCCTGTAATATGTATTGGTTTTCACCAAAAGACGATCCAAATTTCAAGTTCGGTTTTGATATATGTTGGGCAAGACTGCATGCGCTAGGATACGGCATTTATTTTCCTCAGGACCATAGTTTGTCAGAGTATCCAGATTTATTCTCACAGGATGTACAATTAGTACGGGGTAATAAGATCTTCTCTCAGAAGTTTGATAGCATTTTGCATGCACTTCAGGTAGTGCAATTTCTATATTGGAAAGGCAAAGAATTGGATTCTACTGACTCCAAGGAAGATTCAAGCTATGCAGAAGGTTTATCTCCAAAGAGAAATGTGGGAGTCGATTTCTTTAAATCCGAGTTCTCAAAGGACGATGCACTGGCGGAGTCAGTCTTCTTGTATGCTAGTTCTGATGTCAAGGAGAAGCAACACCGGTTGGGGTGGGCTAAGCTTGCTGCAGTAGCAGAAGCTTGGGAAGATTATGCTTCCAATTTAAGGAGAGAACTCCTTCGGAGCTTCGCCCATTGGAGAACCAGTCAATCCATATACAGTGTTCCATATGGTAGTTGA MPLKRETENWMKMGDEAEINQRWRLILENFLTLEECRELEFIHKSCCTVGYRPYVFSTTLLHLVVSNSAQLIMPFVSIRERLKEKAEEFFGCEYELFVEFTGLISWTRGARIGWHSDDNRPYLKQREFTAVCYLNSYGVDFEGGLFHFQDGEPKTISPLCGDCVMYTADSLNVHSVDEVTSGERLTLTLWFTRDSSHDEDAKLLSLLSQSHLHDRLPDSCLPQPPSCNMYWFSPKDDPNFKFGFDICWARLHALGYGIYFPQDHSLSEYPDLFSQDVQLVRGNKIFSQKFDSILHALQVVQFLYWKGKELDSTDSKEDSSYAEGLSPKRNVGVDFFKSEFSKDDALAESVFLYASSDVKEKQHRLGWAKLAAVAEAWEDYASNLRRELLRSFAHWRTSQSIYSVPYGS
BLAST of CmaCh04G000200 vs. Swiss-Prot
Match: P3H1_HUMAN (Prolyl 3-hydroxylase 1 OS=Homo sapiens GN=P3H1 PE=1 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 5.8e-12 Identity = 54/222 (24.32%), Postives = 96/222 (43.24%), Query Frame = 1
BLAST of CmaCh04G000200 vs. Swiss-Prot
Match: P3H1_MOUSE (Prolyl 3-hydroxylase 1 OS=Mus musculus GN=P3h1 PE=1 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 5.8e-12 Identity = 53/222 (23.87%), Postives = 101/222 (45.50%), Query Frame = 1
BLAST of CmaCh04G000200 vs. Swiss-Prot
Match: P3H1_RAT (Prolyl 3-hydroxylase 1 OS=Rattus norvegicus GN=P3h1 PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 7.5e-12 Identity = 53/222 (23.87%), Postives = 101/222 (45.50%), Query Frame = 1
BLAST of CmaCh04G000200 vs. Swiss-Prot
Match: P3H2_RAT (Prolyl 3-hydroxylase 2 OS=Rattus norvegicus GN=P3h2 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.3e-11 Identity = 66/238 (27.73%), Postives = 103/238 (43.28%), Query Frame = 1
BLAST of CmaCh04G000200 vs. Swiss-Prot
Match: P3H2_CHICK (Prolyl 3-hydroxylase 2 OS=Gallus gallus GN=P3H2 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-11 Identity = 64/244 (26.23%), Postives = 106/244 (43.44%), Query Frame = 1
BLAST of CmaCh04G000200 vs. TrEMBL
Match: A0A0A0KMN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G289640 PE=4 SV=1) HSP 1 Score: 657.5 bits (1695), Expect = 1.0e-185 Identity = 324/411 (78.83%), Postives = 344/411 (83.70%), Query Frame = 1
BLAST of CmaCh04G000200 vs. TrEMBL
Match: V4UGA2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015473mg PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 7.3e-131 Identity = 232/389 (59.64%), Postives = 281/389 (72.24%), Query Frame = 1
BLAST of CmaCh04G000200 vs. TrEMBL
Match: F6HFA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g06280 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 1.6e-130 Identity = 229/393 (58.27%), Postives = 283/393 (72.01%), Query Frame = 1
BLAST of CmaCh04G000200 vs. TrEMBL
Match: M5Y3D7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017932mg PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 6.2e-130 Identity = 234/394 (59.39%), Postives = 282/394 (71.57%), Query Frame = 1
BLAST of CmaCh04G000200 vs. TrEMBL
Match: A0A067F0I4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015648mg PE=4 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 4.0e-129 Identity = 230/389 (59.13%), Postives = 278/389 (71.47%), Query Frame = 1
BLAST of CmaCh04G000200 vs. TAIR10
Match: AT1G68080.1 (AT1G68080.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 419.5 bits (1077), Expect = 2.4e-117 Identity = 214/385 (55.58%), Postives = 267/385 (69.35%), Query Frame = 1
BLAST of CmaCh04G000200 vs. NCBI nr
Match: gi|449445405|ref|XP_004140463.1| (PREDICTED: prolyl 3-hydroxylase 1 [Cucumis sativus]) HSP 1 Score: 667.5 bits (1721), Expect = 1.4e-188 Identity = 324/396 (81.82%), Postives = 344/396 (86.87%), Query Frame = 1
BLAST of CmaCh04G000200 vs. NCBI nr
Match: gi|659113939|ref|XP_008456831.1| (PREDICTED: uncharacterized protein LOC103496668 isoform X1 [Cucumis melo]) HSP 1 Score: 665.2 bits (1715), Expect = 7.2e-188 Identity = 324/397 (81.61%), Postives = 345/397 (86.90%), Query Frame = 1
BLAST of CmaCh04G000200 vs. NCBI nr
Match: gi|700195676|gb|KGN50853.1| (hypothetical protein Csa_5G289640 [Cucumis sativus]) HSP 1 Score: 657.5 bits (1695), Expect = 1.5e-185 Identity = 324/411 (78.83%), Postives = 344/411 (83.70%), Query Frame = 1
BLAST of CmaCh04G000200 vs. NCBI nr
Match: gi|659113941|ref|XP_008456833.1| (PREDICTED: uncharacterized protein LOC103496668 isoform X2 [Cucumis melo]) HSP 1 Score: 588.2 bits (1515), Expect = 1.1e-164 Identity = 297/397 (74.81%), Postives = 316/397 (79.60%), Query Frame = 1
BLAST of CmaCh04G000200 vs. NCBI nr
Match: gi|645228334|ref|XP_008220946.1| (PREDICTED: uncharacterized protein LOC103320983 [Prunus mume]) HSP 1 Score: 481.5 bits (1238), Expect = 1.5e-132 Identity = 238/397 (59.95%), Postives = 286/397 (72.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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