CmoCh03G012100 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G012100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family, putative
Location	Cmo_Chr03 : 9415764 .. 9416090 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAAAGAACCTAAACACGATAGTTTCGATGAAGAATTCAATGCAGCAGTTATGGTGCCGAAAGACGTGGAAGAAGGCCATTTTGTGGTATTTGCAGCGGATGGTGATGAGAGAAAGAGGTTTGTCATTAATTTGAAGTTCTTGTCTAACCCTGCATTCTTGAGGCTATTGGAGCTGGCAAAGGAAGAATATGGGTTCCAACAAAAGGGAGCTCTAACAGTCCCTTGTCCGCCTGAAGAACTACAGAAGATTGTAGAAGAAAGAAGAAAACAGAAAACTGGGGGGTGGATTGCATCTAGTGTTCATATCATAACTGGCTACTAG

mRNA sequence

ATGTCTAAAGAACCTAAACACGATAGTTTCGATGAAGAATTCAATGCAGCAGTTATGGTGCCGAAAGACGTGGAAGAAGGCCATTTTGTGGTATTTGCAGCGGATGGTGATGAGAGAAAGAGGTTTGTCATTAATTTGAAGTTCTTGTCTAACCCTGCATTCTTGAGGCTATTGGAGCTGGCAAAGGAAGAATATGGGTTCCAACAAAAGGGAGCTCTAACAGTCCCTTGTCCGCCTGAAGAACTACAGAAGATTGTAGAAGAAAGAAGAAAACAGAAAACTGGGGGGTGGATTGCATCTAGTGTTCATATCATAACTGGCTACTAG

Coding sequence (CDS)

ATGTCTAAAGAACCTAAACACGATAGTTTCGATGAAGAATTCAATGCAGCAGTTATGGTGCCGAAAGACGTGGAAGAAGGCCATTTTGTGGTATTTGCAGCGGATGGTGATGAGAGAAAGAGGTTTGTCATTAATTTGAAGTTCTTGTCTAACCCTGCATTCTTGAGGCTATTGGAGCTGGCAAAGGAAGAATATGGGTTCCAACAAAAGGGAGCTCTAACAGTCCCTTGTCCGCCTGAAGAACTACAGAAGATTGTAGAAGAAAGAAGAAAACAGAAAACTGGGGGGTGGATTGCATCTAGTGTTCATATCATAACTGGCTACTAG

Homology

[Close]

BLAST of CmoCh03G012100 vs. Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.0e-09
Identity = 28/78 (35.90%), Postives = 51/78 (65.38%), Query Frame = 1


Query: 22 KDVEEGHFVV-FAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGFQQKGALTVPCPPE 81
          KDV +G   +   + G+E++RF++ + + ++P F++LL+ A++EYGF QKG +T+PC  E
Sbjct: 22 KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 82 E---LQKIVEERRKQKTG 96
          E   +Q +++  R    G
Sbjct: 82 EFRYVQALIDGERSVYNG 99

[Close]

BLAST of CmoCh03G012100 vs. Swiss-Prot
Match: SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 7.9e-09
Identity = 28/67 (41.79%), Postives = 44/67 (65.67%), Query Frame = 1


Query: 24  VEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ 83
           V EGH  V+   GDE +RFV++ + L++P F+ LL  + +EYG++QKG L +PC     +
Sbjct: 50  VPEGHVPVYV--GDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFE 109

Query: 84  KIVEERR 91
           +I+E  R
Sbjct: 110 RIMESLR 114

[Close]

BLAST of CmoCh03G012100 vs. Swiss-Prot
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-08
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 1


Query: 24  VEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ 83
           V EGH  V+   G E +RFV+N + L++P F+ LL+ + +EYG++Q+G L +PC     +
Sbjct: 38  VPEGHVPVYV--GHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFE 97

Query: 84  KIVEERR 91
           +I+E  R
Sbjct: 98  RILESLR 102

[Close]

BLAST of CmoCh03G012100 vs. Swiss-Prot
Match: SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.4e-07
Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 1


Query: 20  VPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGFQQKGALTVPCPP 79
           V   V  GH  V    G++++RFV++ + L++P F+ LL  + +EYG+ QKG L +PC  
Sbjct: 44  VASSVPSGHVPVNV--GEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNV 103

Query: 80  EELQKIVEERR 91
              +++VE  R
Sbjct: 104 FVFEQVVESLR 112

[Close]

BLAST of CmoCh03G012100 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.6e-07
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 1


Query: 15 NAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGFQQ-KGAL 74
          N A     DVE+G+  V+   G++ +RFVI + +L+ P+F  LL  A+EE+G+    G L
Sbjct: 16 NQASSKAVDVEKGYLAVYV--GEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGL 75

Query: 75 TVPCPPEELQKI 86
          T+PC  +  Q I
Sbjct: 76 TIPCSEDVFQHI 85

[Close]

BLAST of CmoCh03G012100 vs. TrEMBL
Match: A0A0A0KEQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G446450 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.7e-45
Identity = 92/108 (85.19%), Postives = 97/108 (89.81%), Query Frame = 1


Query: 1   MSKEPKHDSFDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLEL 60
           +SKE +H+SF EEF AA  VPKDVEEGHFVVFA DGDERKRFVINL+FLSNP FLRLLEL
Sbjct: 18  LSKESRHESFYEEFEAAATVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLEL 77

Query: 61  AKEEYGFQQKGALTVPCPPEELQKIVEERRKQKTGGWIASSVHIITGY 109
           AKEEYGFQQKGALTVPC PEELQKIVEERRKQK G WIASSVHIIT +
Sbjct: 78  AKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVHIITSF 125

[Close]

BLAST of CmoCh03G012100 vs. TrEMBL
Match: A0A061F057_THECC (SAUR family protein, putative OS=Theobroma cacao GN=TCM_022215 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-23
Identity = 53/89 (59.55%), Postives = 64/89 (71.91%), Query Frame = 1


Query: 10  FDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGFQQ 69
           FDE       +PKDV+EGHF V A  G + KRF++ L +L NPAFLRLLE AKEEYGF Q
Sbjct: 44  FDENVEETKKIPKDVKEGHFAVIAVKGGKPKRFILELSYLRNPAFLRLLEQAKEEYGFHQ 103

Query: 70  KGALTVPCPPEELQKIVEERRKQKTGGWI 99
            GALTVPC PEEL+KI+E+R K+    W+
Sbjct: 104 TGALTVPCQPEELEKILEDRIKKIASAWV 132

[Close]

BLAST of CmoCh03G012100 vs. TrEMBL
Match: V7BKU7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G219400g PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.7e-23
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 11  DEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGFQQK 70
           ++  +A+  VP DV EGHFVV A  G+E KRFV+ L +LSNPAFL LLE A+EEYGFQQK
Sbjct: 31  EDPLHASAQVPDDVSEGHFVVVANKGEETKRFVVELHYLSNPAFLELLERAREEYGFQQK 90

Query: 71  GALTVPCPPEELQKIVEERRKQKTG 96
           G L +PC P+ELQKI+EERR +  G
Sbjct: 91  GVLEIPCLPQELQKILEERRDESVG 115

[Close]

BLAST of CmoCh03G012100 vs. TrEMBL
Match: M5W0S3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013102mg PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-22
Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 1


Query: 7   HDSFDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEYG 66
           H+ FDE    A +VP+DV+EGHF VFA  G E +RFV+ L+ L NP FLRLLE A+EEYG
Sbjct: 43  HNDFDE----ATVVPEDVKEGHFAVFAVKGKEAERFVVKLESLQNPEFLRLLEEAEEEYG 102

Query: 67  FQQKGALTVPCPPEELQKIVEERRKQKTGGWIASSVHIITG 108
           F+QKGAL VPC PEEL KI+E RR++ +      ++ +I G
Sbjct: 103 FEQKGALAVPCRPEELHKILENRREKNSSNNNNINLRVIPG 139

[Close]

BLAST of CmoCh03G012100 vs. TrEMBL
Match: K7KFT8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G183100 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-22
Identity = 53/79 (67.09%), Postives = 63/79 (79.75%), Query Frame = 1


Query: 11  DEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGFQQK 70
           DEE   A  VP+DV+EGHF V A  G+E KRFV+ L +L++PAFL+LLE A+EEYGFQQK
Sbjct: 43  DEENEHATKVPEDVKEGHFAVIAMHGEETKRFVVELDYLTDPAFLKLLEQAREEYGFQQK 102

Query: 71  GALTVPCPPEELQKIVEER 90
           GAL VPC PEELQKI+E R
Sbjct: 103 GALAVPCTPEELQKIIENR 121

[Close]

BLAST of CmoCh03G012100 vs. TAIR10
Match: AT3G09870.1 (AT3G09870.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 101.7 bits (252), Expect = 3.0e-22
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 1


Query: 10  FDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGFQQ 69
           F+EE NAA M+P DV+EGH  V A  G+  KRFV+ L+ L+ P FLRLLE A+EE+GFQ 
Sbjct: 31  FEEEGNAASMIPSDVKEGHVAVIAVKGERIKRFVLELEELNKPEFLRLLEQAREEFGFQP 90

Query: 70  KGALTVPCPPEELQKIVEERRK 92
           +G LT+PC PEE+QKI++  R+
Sbjct: 91  RGPLTIPCQPEEVQKILQGSRE 112

[Close]

BLAST of CmoCh03G012100 vs. TAIR10
Match: AT2G28085.1 (AT2G28085.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 81.3 bits (199), Expect = 4.1e-16
Identity = 40/72 (55.56%), Postives = 50/72 (69.44%), Query Frame = 1


Query: 20  VPKDVEEGHFVVFAADG--DERKRFVINLKFLSNPAFLRLLELAKEEYGFQQKGALTVPC 79
           VPKDV+EGHF V A DG  +  +RFV+ L FL +P F +LLE A+EEYGF   GAL VPC
Sbjct: 51  VPKDVKEGHFAVIAVDGYHEPTQRFVVPLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPC 110

Query: 80  PPEELQKIVEER 90
            P  L+ I+ E+
Sbjct: 111 RPSHLRMILTEQ 122

[Close]

BLAST of CmoCh03G012100 vs. TAIR10
Match: AT3G43120.1 (AT3G43120.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 62.8 bits (151), Expect = 1.5e-10
Identity = 38/90 (42.22%), Postives = 49/90 (54.44%), Query Frame = 1


Query: 8   DSFDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGF 67
           DS +E    +   P DV +G+  V+   G E +RF+I   FLS+  F  LLE A+EEYGF
Sbjct: 63  DSDEETTCQSPEPPPDVPKGYLAVYV--GPELRRFIIPTNFLSHSLFKVLLEKAEEEYGF 122

Query: 68  QQKGALTVPCPPEE---LQKIVEERRKQKT 95
              GALT+PC  E    L K +E   K  T
Sbjct: 123 DHSGALTIPCEVETFKYLLKCIENHPKDDT 150

[Close]

BLAST of CmoCh03G012100 vs. TAIR10
Match: AT5G20810.2 (AT5G20810.2 SAUR-like auxin-responsive protein family )

HSP 1 Score: 62.0 bits (149), Expect = 2.6e-10
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 1


Query: 6   KHDSFDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEY 65
           K+   DEE   +   P DV +G+  V+   G E +RF+I   +LS+  F  LLE A+EE+
Sbjct: 61  KNGDSDEETCQSPEPPHDVPKGNLAVYV--GPELRRFIIPTSYLSHSLFKVLLEKAEEEF 120

Query: 66  GFQQKGALTVPCPPEELQKIVE 88
           GF Q GALT+PC  E  + +++
Sbjct: 121 GFDQSGALTIPCEVETFKYLLK 140

[Close]

BLAST of CmoCh03G012100 vs. TAIR10
Match: AT2G46690.1 (AT2G46690.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 61.6 bits (148), Expect = 3.4e-10
Identity = 28/78 (35.90%), Postives = 51/78 (65.38%), Query Frame = 1


Query: 22 KDVEEGHFVV-FAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGFQQKGALTVPCPPE 81
          KDV +G   +   + G+E++RF++ + + ++P F++LL+ A++EYGF QKG +T+PC  E
Sbjct: 22 KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 82 E---LQKIVEERRKQKTG 96
          E   +Q +++  R    G
Sbjct: 82 EFRYVQALIDGERSVYNG 99

[Close]

BLAST of CmoCh03G012100 vs. NCBI nr
Match: gi|659125022|ref|XP_008462469.1| (PREDICTED: uncharacterized protein LOC103500818 [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 4.0e-45
Identity = 93/108 (86.11%), Postives = 98/108 (90.74%), Query Frame = 1


Query: 1   MSKEPKHDSFDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLEL 60
           +SKEPK +SF EEF AA  VPKDVEEGHFVVFA DGDERKRFVINL+FLSNP FLRLLEL
Sbjct: 18  LSKEPKPESFYEEFEAAATVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLEL 77

Query: 61  AKEEYGFQQKGALTVPCPPEELQKIVEERRKQKTGGWIASSVHIITGY 109
           AKEEYGFQQKGALTVPC PEELQKIVEERRKQK+G WIASSVHIIT +
Sbjct: 78  AKEEYGFQQKGALTVPCRPEELQKIVEERRKQKSGEWIASSVHIITSF 125

[Close]

BLAST of CmoCh03G012100 vs. NCBI nr
Match: gi|700192981|gb|KGN48185.1| (hypothetical protein Csa_6G446450 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 6.8e-45
Identity = 92/108 (85.19%), Postives = 97/108 (89.81%), Query Frame = 1


Query: 1   MSKEPKHDSFDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLEL 60
           +SKE +H+SF EEF AA  VPKDVEEGHFVVFA DGDERKRFVINL+FLSNP FLRLLEL
Sbjct: 18  LSKESRHESFYEEFEAAATVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLEL 77

Query: 61  AKEEYGFQQKGALTVPCPPEELQKIVEERRKQKTGGWIASSVHIITGY 109
           AKEEYGFQQKGALTVPC PEELQKIVEERRKQK G WIASSVHIIT +
Sbjct: 78  AKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVHIITSF 125

[Close]

BLAST of CmoCh03G012100 vs. NCBI nr
Match: gi|657990666|ref|XP_008387552.1| (PREDICTED: uncharacterized protein LOC103450013 [Malus domestica])

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-25
Identity = 56/90 (62.22%), Postives = 73/90 (81.11%), Query Frame = 1


Query: 5   PKHDSFDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEE 64
           P+H+ FDE+   A +VPKDV+EGHF VFA  G+E +RFV+ L+ LSNP FLRLLE AKEE
Sbjct: 45  PRHNDFDEDSEVATVVPKDVKEGHFTVFAVKGNEAERFVVKLESLSNPEFLRLLEEAKEE 104

Query: 65  YGFQQKGALTVPCPPEELQKIVEERRKQKT 95
           YGF+QKGAL +PC P+ELQKI++  R++K+
Sbjct: 105 YGFEQKGALAIPCRPQELQKILQTCRRKKS 134

[Close]

BLAST of CmoCh03G012100 vs. NCBI nr
Match: gi|694403830|ref|XP_009376827.1| (PREDICTED: uncharacterized protein LOC103965486 [Pyrus x bretschneideri])

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-24
Identity = 56/89 (62.92%), Postives = 72/89 (80.90%), Query Frame = 1


Query: 6   KHDSFDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEY 65
           +H+ FDE+   A +VPKDV+EGHF VFA  G+E +RFV+ L+ LSNP FLRLLE AKEEY
Sbjct: 46  RHNDFDEDSEVATVVPKDVKEGHFTVFAVKGNEAERFVVKLESLSNPEFLRLLEEAKEEY 105

Query: 66  GFQQKGALTVPCPPEELQKIVEERRKQKT 95
           GF+QKGAL VPC P+ELQKI++  R++K+
Sbjct: 106 GFEQKGALAVPCRPQELQKILQTCRRKKS 134

[Close]

BLAST of CmoCh03G012100 vs. NCBI nr
Match: gi|731399409|ref|XP_003632616.2| (PREDICTED: uncharacterized protein LOC100255176 [Vitis vinifera])

HSP 1 Score: 116.7 bits (291), Expect = 2.5e-23
Identity = 54/82 (65.85%), Postives = 67/82 (81.71%), Query Frame = 1


Query: 10  FDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFVINLKFLSNPAFLRLLELAKEEYGFQQ 69
           +DEE  AA MVP DV+EGHF V+A  G E KRF+++L +L+NPAFLRLLE A+EEYGF+Q
Sbjct: 44  YDEELEAATMVPDDVKEGHFAVWAVMGGEPKRFIVDLCYLTNPAFLRLLEQAEEEYGFEQ 103

Query: 70  KGALTVPCPPEELQKIVEERRK 92
           KG L VPC PEELQKI++ RR+
Sbjct: 104 KGTLAVPCQPEELQKILQPRRE 125

The following BLAST results are available for this feature:

BLAST of CmoCh03G012100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU32_ARATH	6.0e-09	35.90	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1	[more]
SAU72_ARATH	7.9e-09	41.79	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1	[more]
SAU71_ARATH	3.0e-08	40.30	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1	[more]
SAU40_ARATH	7.4e-07	36.62	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana GN=SAUR40 PE=2 SV=1	[more]
AX6B_SOYBN	9.6e-07	38.89	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]

BLAST of CmoCh03G012100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEQ9_CUCSA	4.7e-45	85.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G446450 PE=4 SV=1	[more]
A0A061F057_THECC	2.3e-23	59.55	SAUR family protein, putative OS=Theobroma cacao GN=TCM_022215 PE=4 SV=1	[more]
V7BKU7_PHAVU	6.7e-23	62.35	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G219400g PE=4 SV=1	[more]
M5W0S3_PRUPE	1.5e-22	55.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013102mg PE=4 SV=1	[more]
K7KFT8_SOYBN	2.5e-22	67.09	Uncharacterized protein OS=Glycine max GN=GLYMA_03G183100 PE=4 SV=1	[more]

BLAST of CmoCh03G012100 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G09870.1	3.0e-22	57.32	SAUR-like auxin-responsive protein family	[more]
AT2G28085.1	4.1e-16	55.56	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	1.5e-10	42.22	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	2.6e-10	40.24	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	3.4e-10	35.90	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh03G012100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125022\|ref\|XP_008462469.1\|	4.0e-45	86.11	PREDICTED: uncharacterized protein LOC103500818 [Cucumis melo]	[more]
gi\|700192981\|gb\|KGN48185.1\|	6.8e-45	85.19	hypothetical protein Csa_6G446450 [Cucumis sativus]	[more]
gi\|657990666\|ref\|XP_008387552.1\|	2.1e-25	62.22	PREDICTED: uncharacterized protein LOC103450013 [Malus domestica]	[more]
gi\|694403830\|ref\|XP_009376827.1\|	1.0e-24	62.92	PREDICTED: uncharacterized protein LOC103965486 [Pyrus x bretschneideri]	[more]
gi\|731399409\|ref\|XP_003632616.2\|	2.5e-23	65.85	PREDICTED: uncharacterized protein LOC100255176 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G012100.1	CmoCh03G012100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 19..86 score: 8.7
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 1..94 score: 5.4
None	No IPR available	PANTHER	PTHR31374:SF19	F8A24.8 PROTEIN	coord: 1..94 score: 5.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G012100	Cucsa.124660	Cucumber (Gy14) v1	cgycmoB0324
CmoCh03G012100	Cucsa.385860	Cucumber (Gy14) v1	cgycmoB1069
CmoCh03G012100	CmaCh03G012140	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G012100	Cla008714	Watermelon (97103) v1	cmowmB639
CmoCh03G012100	Csa6G147590	Cucumber (Chinese Long) v2	cmocuB672
CmoCh03G012100	Csa6G446450	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G012100	MELO3C024464	Melon (DHL92) v3.5.1	cmomeB598
CmoCh03G012100	ClCG02G021410	Watermelon (Charleston Gray)	cmowcgB580
CmoCh03G012100	ClCG04G009290	Watermelon (Charleston Gray)	cmowcgB589
CmoCh03G012100	CSPI06G11770	Wild cucumber (PI 183967)	cmocpiB683
CmoCh03G012100	CSPI06G24670	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G012100	Lsi10G012400	Bottle gourd (USVL1VR-Ls)	cmolsiB575
CmoCh03G012100	Lsi01G013100	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G012100	Cp4.1LG10g04390	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G012100	Cp4.1LG16g05230	Cucurbita pepo (Zucchini)	cmocpeB610
CmoCh03G012100	MELO3C024464.2	Melon (DHL92) v3.6.1	cmomedB687
CmoCh03G012100	MELO3C026914.2	Melon (DHL92) v3.6.1	cmomedB665
CmoCh03G012100	CsaV3_6G039880	Cucumber (Chinese Long) v3	cmocucB0794
CmoCh03G012100	CsaV3_6G014200	Cucumber (Chinese Long) v3	cmocucB0796
CmoCh03G012100	Cla97C02G047510	Watermelon (97103) v2	cmowmbB652
CmoCh03G012100	CsGy6G011880	Cucumber (Gy14) v2	cgybcmoB813
CmoCh03G012100	CsGy6G024080	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G012100	Carg10428	Silver-seed gourd	carcmoB0336

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G012100	CmoCh20G005420	Cucurbita moschata (Rifu)	cmocmoB419

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G012100	Melon (DHL92) v3.5.1	cmomeB591
CmoCh03G012100	Melon (DHL92) v3.5.1	cmomeB585
CmoCh03G012100	Watermelon (Charleston Gray)	cmowcgB570
CmoCh03G012100	Watermelon (97103) v1	cmowmB606
CmoCh03G012100	Watermelon (97103) v1	cmowmB612
CmoCh03G012100	Watermelon (97103) v1	cmowmB632
CmoCh03G012100	Cucurbita pepo (Zucchini)	cmocpeB615
CmoCh03G012100	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G012100	Cucurbita pepo (Zucchini)	cmocpeB635
CmoCh03G012100	Cucurbita pepo (Zucchini)	cmocpeB642
CmoCh03G012100	Bottle gourd (USVL1VR-Ls)	cmolsiB597
CmoCh03G012100	Cucumber (Gy14) v2	cgybcmoB382
CmoCh03G012100	Melon (DHL92) v3.6.1	cmomedB676
CmoCh03G012100	Silver-seed gourd	carcmoB0220
CmoCh03G012100	Silver-seed gourd	carcmoB0349
CmoCh03G012100	Silver-seed gourd	carcmoB0903
CmoCh03G012100	Cucumber (Chinese Long) v3	cmocucB0772
CmoCh03G012100	Watermelon (97103) v2	cmowmbB644
CmoCh03G012100	Watermelon (97103) v2	cmowmbB662
CmoCh03G012100	Wax gourd	cmowgoB0764
CmoCh03G012100	Wax gourd	cmowgoB0783
CmoCh03G012100	Cucurbita moschata (Rifu)	cmocmoB217
CmoCh03G012100	Cucurbita moschata (Rifu)	cmocmoB454
CmoCh03G012100	Cucurbita moschata (Rifu)	cmocmoB455
CmoCh03G012100	Cucumber (Gy14) v1	cgycmoB0841
CmoCh03G012100	Cucurbita maxima (Rimu)	cmacmoB263
CmoCh03G012100	Cucurbita maxima (Rimu)	cmacmoB827
CmoCh03G012100	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G012100	Wild cucumber (PI 183967)	cmocpiB660
CmoCh03G012100	Cucumber (Chinese Long) v2	cmocuB649