CmoCh03G011410 (gene) Cucurbita moschata (Rifu)

NameCmoCh03G011410
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr03 : 9086129 .. 9087970 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCGCTCTCTCAACGCCATGGAACACTCAGCTCAGAGAATTAGCAAAACGATGCCAATTCCTTCAAGCTCTAAGTCTCTATACCCAAATGCTTCGCCATGGCGATCACCCCAATGCCTTCACTTTCCCGTTTGCCCTCAAATCCTGCGCGGCACTCTCGCTCCCCATACTCGGCGGCCAATTTCATGGTCAAATTATCAAAGTTGGGTGTGAATCTGAACCTTTTGTGCAAACTGGTTTGATTTCTATGTACTGCAGGGGTTCATTACTCGGAAATGCCCGTAAAGTGTTTGATGAAAAGTCCCAGTCCAGAAAGCTTACCGTTTGCTACAATGCTTTGATTTCCGGCTATGTTTCGAATTCTAAAAGTTCTGACGCGGTTCTTTTGTTTCGCCAAATGAATGAAGAGGGTGTCCCAGTTAATTCAGTTACATTGCTGGGTTTGATCCCAGTGTGTGTATCTCCGATTAATTTGGAGCTTGGATTGTCTCTGCATTGCTCAACATTGAAATATGGATTGGATTCAGATGTCTCCGTTGTTAACTGTTTCATTACTATGTACATGAAATGTGGCTCGGTTAATCATGCACAGAACCTGTTTGATGAAATGCCTGAGAAGGGTTTGATTTCTTGGAACGCTATGGTTTCTGGGTACGCACAAAATGGGCTGGCAGCTAATGTTTTGGAGCTCTATCATAACATGGAGTTACATGGGATTCACCCGGATCCCTTCACTCTTGTTGGGGTTTTATCATCTTGCGCCAACCTTGGGGCTCAGAGTGTTGGCCGTGAGGTAGAGCTTAAGATCCAAGCAAGTGGATTTACCAATAATCAGTTTCTAAATAATGCTTTGATCAATATGTACGCAAGGTGTGGAAATTTAACCAAGGCACAAGCATTGTTCGATGAAATGCCCGAAAGAACATTAGTTTCATGGACAGCAATTATAGGTGGGTATGGAATGCATGGACATGGAGAAATTGCAGTGCAGCTATTCGAAGACATGATAAGGAGTGGCATTGTACCTGATGGAACTGCGTTTGTGAGTGTCTTGTCTGCCTGTAGCCATGCAGGGCTGACATCTCAGGGCATGGAATATTTCAAGATGATGGGAAGAAACTATCAATTGGAACCAGGTCCAGAGCATTATTCGTGCATGGTGGATCTTCTGGGGCGAGCAGGGCGGCTAAATGAAGCTCGGAATCTCATTGAATCCATGGCAATAGAGCCTGATGGTGCCGTCTGGGGAGCTCTTCTGGGTGCTTGTAAGATCCACCAGAATGTCAAGTTAGCAGAGTTGGCTTTTGAACGTGTGGTCGAGCTTGAACCTGCAAACATAGGATACTATGTGTTATTATCAAACATTTATAATGATACCAAGAACTCGAAAGGGGTTTTGAGGATCCGGATTATGATGAAGGAGAGGAAGCTGAAGAAGGATCCTGGGTGTAGCTATGTTGAATTGAAGGGCAGAGTTCATCCATTTGTAGTTGGGGATAGAAGCCATCCCCAGGCTGAAGAGATATATAGACTGTTGGAGGAGTTAGCGTTGGTGCATGAATTTGGAGAGGCTAAAAGAGCTGATAGAGAAGAAAGCAACAAAGATTTGTTTGCTGGGGCTGCTGGAGTTCATAGTGAAAAATTGGCTGTCGCCTTTGGACTTCTGAATACCACGGCTGGGACTGAAGTTGTGATCATAAAAAACCTTAGGATATGTGAAGATTGTCACTTGTTTTTCAAGATTGTTAGCAAAATTGTTCATCGTCAACTAACTGTTCGAGACGCTACTCGCTTCCATCATTTTAGAAATGGGAGCTGTTCTTGTAAGGATTATTGGTAA

mRNA sequence

ATGACCGCTCTCTCAACGCCATGGAACACTCAGCTCAGAGAATTAGCAAAACGATGCCAATTCCTTCAAGCTCTAAGTCTCTATACCCAAATGCTTCGCCATGGCGATCACCCCAATGCCTTCACTTTCCCGTTTGCCCTCAAATCCTGCGCGGCACTCTCGCTCCCCATACTCGGCGGCCAATTTCATGGTCAAATTATCAAAGTTGGGTGTGAATCTGAACCTTTTGTGCAAACTGGTTTGATTTCTATGTACTGCAGGGGTTCATTACTCGGAAATGCCCGTAAAGTGTTTGATGAAAAGTCCCAGTCCAGAAAGCTTACCGTTTGCTACAATGCTTTGATTTCCGGCTATGTTTCGAATTCTAAAAGTTCTGACGCGGTTCTTTTGTTTCGCCAAATGAATGAAGAGGGTGTCCCAGTTAATTCAGTTACATTGCTGGGTTTGATCCCAGTGTGTGTATCTCCGATTAATTTGGAGCTTGGATTGTCTCTGCATTGCTCAACATTGAAATATGGATTGGATTCAGATGTCTCCGTTGTTAACTGTTTCATTACTATGTACATGAAATGTGGCTCGGTTAATCATGCACAGAACCTGTTTGATGAAATGCCTGAGAAGGGTTTGATTTCTTGGAACGCTATGGTTTCTGGGTACGCACAAAATGGGCTGGCAGCTAATGTTTTGGAGCTCTATCATAACATGGAGTTACATGGGATTCACCCGGATCCCTTCACTCTTGTTGGGGTTTTATCATCTTGCGCCAACCTTGGGGCTCAGAGTGTTGGCCGTGAGGTAGAGCTTAAGATCCAAGCAAGTGGATTTACCAATAATCAGTTTCTAAATAATGCTTTGATCAATATGTACGCAAGGTGTGGAAATTTAACCAAGGCACAAGCATTGTTCGATGAAATGCCCGAAAGAACATTAGTTTCATGGACAGCAATTATAGGTGGGTATGGAATGCATGGACATGGAGAAATTGCAGTGCAGCTATTCGAAGACATGATAAGGAGTGGCATTGTACCTGATGGAACTGCGTTTGTGAGTGTCTTGTCTGCCTGTAGCCATGCAGGGCTGACATCTCAGGGCATGGAATATTTCAAGATGATGGGAAGAAACTATCAATTGGAACCAGGTCCAGAGCATTATTCGTGCATGGTGGATCTTCTGGGGCGAGCAGGGCGGCTAAATGAAGCTCGGAATCTCATTGAATCCATGGCAATAGAGCCTGATGGTGCCGTCTGGGGAGCTCTTCTGGGTGCTTGTAAGATCCACCAGAATGTCAAGTTAGCAGAGTTGGCTTTTGAACGTGTGGTCGAGCTTGAACCTGCAAACATAGGATACTATGTGTTATTATCAAACATTTATAATGATACCAAGAACTCGAAAGGGGTTTTGAGGATCCGGATTATGATGAAGGAGAGGAAGCTGAAGAAGGATCCTGGGTGTAGCTATGTTGAATTGAAGGGCAGAGTTCATCCATTTGTAGTTGGGGATAGAAGCCATCCCCAGGCTGAAGAGATATATAGACTGTTGGAGGAGTTAGCGTTGGTGCATGAATTTGGAGAGGCTAAAAGAGCTGATAGAGAAGAAAGCAACAAAGATTTGTTTGCTGGGGCTGCTGGAGTTCATAGTGAAAAATTGGCTGTCGCCTTTGGACTTCTGAATACCACGGCTGGGACTGAAGTTGTGATCATAAAAAACCTTAGGATATGTGAAGATTGTCACTTGTTTTTCAAGATTGTTAGCAAAATTGTTCATCGTCAACTAACTGTTCGAGACGCTACTCGCTTCCATCATTTTAGAAATGGGAGCTGTTCTTGTAAGGATTATTGGTAA

Coding sequence (CDS)

ATGACCGCTCTCTCAACGCCATGGAACACTCAGCTCAGAGAATTAGCAAAACGATGCCAATTCCTTCAAGCTCTAAGTCTCTATACCCAAATGCTTCGCCATGGCGATCACCCCAATGCCTTCACTTTCCCGTTTGCCCTCAAATCCTGCGCGGCACTCTCGCTCCCCATACTCGGCGGCCAATTTCATGGTCAAATTATCAAAGTTGGGTGTGAATCTGAACCTTTTGTGCAAACTGGTTTGATTTCTATGTACTGCAGGGGTTCATTACTCGGAAATGCCCGTAAAGTGTTTGATGAAAAGTCCCAGTCCAGAAAGCTTACCGTTTGCTACAATGCTTTGATTTCCGGCTATGTTTCGAATTCTAAAAGTTCTGACGCGGTTCTTTTGTTTCGCCAAATGAATGAAGAGGGTGTCCCAGTTAATTCAGTTACATTGCTGGGTTTGATCCCAGTGTGTGTATCTCCGATTAATTTGGAGCTTGGATTGTCTCTGCATTGCTCAACATTGAAATATGGATTGGATTCAGATGTCTCCGTTGTTAACTGTTTCATTACTATGTACATGAAATGTGGCTCGGTTAATCATGCACAGAACCTGTTTGATGAAATGCCTGAGAAGGGTTTGATTTCTTGGAACGCTATGGTTTCTGGGTACGCACAAAATGGGCTGGCAGCTAATGTTTTGGAGCTCTATCATAACATGGAGTTACATGGGATTCACCCGGATCCCTTCACTCTTGTTGGGGTTTTATCATCTTGCGCCAACCTTGGGGCTCAGAGTGTTGGCCGTGAGGTAGAGCTTAAGATCCAAGCAAGTGGATTTACCAATAATCAGTTTCTAAATAATGCTTTGATCAATATGTACGCAAGGTGTGGAAATTTAACCAAGGCACAAGCATTGTTCGATGAAATGCCCGAAAGAACATTAGTTTCATGGACAGCAATTATAGGTGGGTATGGAATGCATGGACATGGAGAAATTGCAGTGCAGCTATTCGAAGACATGATAAGGAGTGGCATTGTACCTGATGGAACTGCGTTTGTGAGTGTCTTGTCTGCCTGTAGCCATGCAGGGCTGACATCTCAGGGCATGGAATATTTCAAGATGATGGGAAGAAACTATCAATTGGAACCAGGTCCAGAGCATTATTCGTGCATGGTGGATCTTCTGGGGCGAGCAGGGCGGCTAAATGAAGCTCGGAATCTCATTGAATCCATGGCAATAGAGCCTGATGGTGCCGTCTGGGGAGCTCTTCTGGGTGCTTGTAAGATCCACCAGAATGTCAAGTTAGCAGAGTTGGCTTTTGAACGTGTGGTCGAGCTTGAACCTGCAAACATAGGATACTATGTGTTATTATCAAACATTTATAATGATACCAAGAACTCGAAAGGGGTTTTGAGGATCCGGATTATGATGAAGGAGAGGAAGCTGAAGAAGGATCCTGGGTGTAGCTATGTTGAATTGAAGGGCAGAGTTCATCCATTTGTAGTTGGGGATAGAAGCCATCCCCAGGCTGAAGAGATATATAGACTGTTGGAGGAGTTAGCGTTGGTGCATGAATTTGGAGAGGCTAAAAGAGCTGATAGAGAAGAAAGCAACAAAGATTTGTTTGCTGGGGCTGCTGGAGTTCATAGTGAAAAATTGGCTGTCGCCTTTGGACTTCTGAATACCACGGCTGGGACTGAAGTTGTGATCATAAAAAACCTTAGGATATGTGAAGATTGTCACTTGTTTTTCAAGATTGTTAGCAAAATTGTTCATCGTCAACTAACTGTTCGAGACGCTACTCGCTTCCATCATTTTAGAAATGGGAGCTGTTCTTGTAAGGATTATTGGTAA
BLAST of CmoCh03G011410 vs. Swiss-Prot
Match: PP223_ARATH (Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 1.3e-230
Identity = 384/610 (62.95%), Postives = 478/610 (78.36%), Query Frame = 1

Query: 5   STPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQFHG 64
           STPWN +LRELA +  F +++SLY  MLR G  P+AF+FPF LKSCA+LSLP+ G Q H 
Sbjct: 18  STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77

Query: 65  QIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNSKS 124
            + K GCE+EPFV T LISMYC+  L+ +ARKVF+E  QS +L+VCYNALISGY +NSK 
Sbjct: 78  HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137

Query: 125 SDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVNCF 184
           +DA  +FR+M E GV V+SVT+LGL+P+C  P  L LG SLH   +K GLDS+V+V+N F
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197

Query: 185 ITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHPDP 244
           ITMYMKCGSV   + LFDEMP KGLI+WNA++SGY+QNGLA +VLELY  M+  G+ PDP
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257

Query: 245 FTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALFDE 304
           FTLV VLSSCA+LGA+ +G EV   ++++GF  N F++NA I+MYARCGNL KA+A+FD 
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317

Query: 305 MPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTSQG 364
           MP ++LVSWTA+IG YGMHG GEI + LF+DMI+ GI PDG  FV VLSACSH+GLT +G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377

Query: 365 MEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGACK 424
           +E F+ M R Y+LEPGPEHYSC+VDLLGRAGRL+EA   IESM +EPDGAVWGALLGACK
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437

Query: 425 IHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDPGC 484
           IH+NV +AELAF +V+E EP NIGYYVL+SNIY+D+KN +G+ RIR+MM+ER  +K PG 
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497

Query: 485 SYVELKGRVHPFVVGDRSHPQAEEIYRLLEEL-ALVHEFGEAKRADREESNKDLFAGAAG 544
           SYVE KGRVH F+ GDRSH Q EE++R+L+EL   V E       DR E      +    
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEE----VSSTTR 557

Query: 545 VHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFHHFR 604
            HSE+LA+AFG+LN+  GTE+++IKNLR+CEDCH+F K VSKIV RQ  VRDA+RFH+F+
Sbjct: 558 EHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFK 617

Query: 605 NGSCSCKDYW 614
           +G CSCKDYW
Sbjct: 618 DGVCSCKDYW 623

BLAST of CmoCh03G011410 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 7.1e-139
Identity = 252/640 (39.38%), Postives = 370/640 (57.81%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQFHGQII 67
           WNT  R  A     + AL LY  M+  G  PN++TFPF LKSCA       G Q HG ++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 68  KVGCESEPFVQTGLISMYCRGSLLGNARKVFDEK---------------------SQSRK 127
           K+GC+ + +V T LISMY +   L +A KVFD+                        ++K
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 128 L--------TVCYNALISGYVSNSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPIN 187
           L         V +NA+ISGY       +A+ LF+ M +  V  +  T++ ++  C    +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281

Query: 188 LELGLSLHCSTLKYGLDSDVSVVNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSG 247
           +ELG  +H     +G  S++ +VN  I +Y KCG +  A  LF+ +P K +ISWN ++ G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341

Query: 248 YAQNGLAANVLELYHNMELHGIHPDPFTLVGVLSSCANLGAQSVGREVELKI--QASGFT 307
           Y    L    L L+  M   G  P+  T++ +L +CA+LGA  +GR + + I  +  G T
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401

Query: 308 NNQFLNNALINMYARCGNLTKAQALFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDM 367
           N   L  +LI+MYA+CG++  A  +F+ +  ++L SW A+I G+ MHG  + +  LF  M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461

Query: 368 IRSGIVPDGTAFVSVLSACSHAGLTSQGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGR 427
            + GI PD   FV +LSACSH+G+   G   F+ M ++Y++ P  EHY CM+DLLG +G 
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGL 521

Query: 428 LNEARNLIESMAIEPDGAVWGALLGACKIHQNVKLAELAFERVVELEPANIGYYVLLSNI 487
             EA  +I  M +EPDG +W +LL ACK+H NV+L E   E ++++EP N G YVLLSNI
Sbjct: 522 FKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 581

Query: 488 YNDTKNSKGVLRIRIMMKERKLKKDPGCSYVELKGRVHPFVVGDRSHPQAEEIYRLLEEL 547
           Y        V + R ++ ++ +KK PGCS +E+   VH F++GD+ HP+  EIY +LEE+
Sbjct: 582 YASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641

Query: 548 ALVHE---FGEAKRADREESNKDLFAGAAGVHSEKLAVAFGLLNTTAGTEVVIIKNLRIC 607
            ++ E   F        +E  ++   GA   HSEKLA+AFGL++T  GT++ I+KNLR+C
Sbjct: 642 EVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 701

Query: 608 EDCHLFFKIVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614
            +CH   K++SKI  R++  RD TRFHHFR+G CSC DYW
Sbjct: 702 RNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

BLAST of CmoCh03G011410 vs. Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 1.9e-136
Identity = 255/613 (41.60%), Postives = 365/613 (59.54%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYTQMLRHG-DHPNAFTFPFALKSCAALSLPILGGQFHGQI 67
           WNT +    K   +++++ ++  ++       +  T    L + A L    LG Q H   
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247

Query: 68  IKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNSKSSD 127
            K GC S  +V TG IS+Y +   +     +F E  +     V YNA+I GY SN ++  
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD--IVAYNAMIHGYTSNGETEL 307

Query: 128 AVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVNCFIT 187
           ++ LF+++   G  + S TL+ L+PV     +L L  ++H   LK    S  SV     T
Sbjct: 308 SLSLFKELMLSGARLRSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTT 367

Query: 188 MYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHPDPFT 247
           +Y K   +  A+ LFDE PEK L SWNAM+SGY QNGL  + + L+  M+     P+P T
Sbjct: 368 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 427

Query: 248 LVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALFDEMP 307
           +  +LS+CA LGA S+G+ V   ++++ F ++ +++ ALI MYA+CG++ +A+ LFD M 
Sbjct: 428 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 487

Query: 308 ERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTSQGME 367
           ++  V+W  +I GYG+HG G+ A+ +F +M+ SGI P    F+ VL ACSHAGL  +G E
Sbjct: 488 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDE 547

Query: 368 YFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGACKIH 427
            F  M   Y  EP  +HY+CMVD+LGRAG L  A   IE+M+IEP  +VW  LLGAC+IH
Sbjct: 548 IFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 607

Query: 428 QNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDPGCSY 487
           ++  LA    E++ EL+P N+GY+VLLSNI++  +N      +R   K+RKL K PG + 
Sbjct: 608 KDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 667

Query: 488 VELKGRVHPFVVGDRSHPQAEEIYRLLEEL-ALVHEFG-----EAKRADREESNKDLFAG 547
           +E+    H F  GD+SHPQ +EIY  LE+L   + E G     E    D EE  ++L   
Sbjct: 668 IEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELM-- 727

Query: 548 AAGVHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFH 607
              VHSE+LA+AFGL+ T  GTE+ IIKNLR+C DCH   K++SKI  R + VRDA RFH
Sbjct: 728 -VKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFH 787

Query: 608 HFRNGSCSCKDYW 614
           HF++G CSC DYW
Sbjct: 788 HFKDGVCSCGDYW 792

BLAST of CmoCh03G011410 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 7.3e-136
Identity = 248/608 (40.79%), Postives = 364/608 (59.87%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQFHGQII 67
           WNT +   ++      AL +   M      P+  T    L + +AL L  +G + HG  +
Sbjct: 204 WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263

Query: 68  KVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNSKSSDA 127
           + G +S   + T L+ MY +   L  AR++FD      +  V +N++I  YV N    +A
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFD--GMLERNVVSWNSMIDAYVQNENPKEA 323

Query: 128 VLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVNCFITM 187
           +L+F++M +EGV    V+++G +  C    +LE G  +H  +++ GLD +VSVVN  I+M
Sbjct: 324 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 383

Query: 188 YMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHPDPFTL 247
           Y KC  V+ A ++F ++  + L+SWNAM+ G+AQNG   + L  +  M    + PD FT 
Sbjct: 384 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 443

Query: 248 VGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALFDEMPE 307
           V V+++ A L      + +   +  S    N F+  AL++MYA+CG +  A+ +FD M E
Sbjct: 444 VSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 503

Query: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTSQGMEY 367
           R + +W A+I GYG HG G+ A++LFE+M +  I P+G  F+SV+SACSH+GL   G++ 
Sbjct: 504 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC 563

Query: 368 FKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGACKIHQ 427
           F MM  NY +E   +HY  MVDLLGRAGRLNEA + I  M ++P   V+GA+LGAC+IH+
Sbjct: 564 FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK 623

Query: 428 NVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDPGCSYV 487
           NV  AE A ER+ EL P + GY+VLL+NIY      + V ++R+ M  + L+K PGCS V
Sbjct: 624 NVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 683

Query: 488 ELKGRVHPFVVGDRSHPQAEEIYRLLEELAL-VHEFGEAKRADREES-NKDLFAGAAGVH 547
           E+K  VH F  G  +HP +++IY  LE+L   + E G     +       D+       H
Sbjct: 684 EIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTH 743

Query: 548 SEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFHHFRNG 607
           SEKLA++FGLLNTTAGT + + KNLR+C DCH   K +S +  R++ VRD  RFHHF+NG
Sbjct: 744 SEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNG 803

Query: 608 SCSCKDYW 614
           +CSC DYW
Sbjct: 804 ACSCGDYW 809

BLAST of CmoCh03G011410 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 9.6e-136
Identity = 236/610 (38.69%), Postives = 380/610 (62.30%), Query Frame = 1

Query: 7   PWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQFHGQI 66
           PWN  +R  ++   F  AL +Y+ M      P++FTFP  LK+C+ LS   +G   H Q+
Sbjct: 86  PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145

Query: 67  IKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNSKSSD 126
            ++G +++ FVQ GLI++Y +   LG+AR VF+      +  V + A++S Y  N +  +
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205

Query: 127 AVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVNCFIT 186
           A+ +F QM +  V  + V L+ ++       +L+ G S+H S +K GL+ +  ++    T
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265

Query: 187 MYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHPDPFT 246
           MY KCG V  A+ LFD+M    LI WNAM+SGYA+NG A   ++++H M    + PD  +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 247 LVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALFDEMP 306
           +   +S+CA +G+    R +   +  S + ++ F+++ALI+M+A+CG++  A+ +FD   
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTSQGME 366
           +R +V W+A+I GYG+HG    A+ L+  M R G+ P+   F+ +L AC+H+G+  +G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 367 YFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGACKIH 426
           +F  M  ++++ P  +HY+C++DLLGRAG L++A  +I+ M ++P   VWGALL ACK H
Sbjct: 446 FFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 505

Query: 427 QNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDPGCSY 486
           ++V+L E A +++  ++P+N G+YV LSN+Y   +    V  +R+ MKE+ L KD GCS+
Sbjct: 506 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 565

Query: 487 VELKGRVHPFVVGDRSHPQAEEIYRLLEEL-ALVHE--FGEAKRADREESNKDLFAGAAG 546
           VE++GR+  F VGD+SHP+ EEI R +E + + + E  F   K A   + N +       
Sbjct: 566 VEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLC 625

Query: 547 VHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFHHFR 606
            HSE++A+A+GL++T  GT + I KNLR C +CH   K++SK+V R++ VRD  RFHHF+
Sbjct: 626 SHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFK 685

Query: 607 NGSCSCKDYW 614
           +G CSC DYW
Sbjct: 686 DGVCSCGDYW 694

BLAST of CmoCh03G011410 vs. TrEMBL
Match: A0A0A0KFC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452690 PE=4 SV=1)

HSP 1 Score: 1090.1 bits (2818), Expect = 0.0e+00
Identity = 532/615 (86.50%), Postives = 567/615 (92.20%), Query Frame = 1

Query: 1   MTALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60
           M ALSTPWNTQLRELAKRCQFLQALSLY QMLRHGD PNAFTFPFALKSCAALSLPILG 
Sbjct: 10  MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGS 69

Query: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120
           QFHGQI KVGC  EPFVQTGLISMYC+GSL+ NARKVF+E   SRKLTVCYNAL+SGYVS
Sbjct: 70  QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 129

Query: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180
           NSK S+AVLLFRQMNEEGVPVNSVTLLGLIP CVSPINLELG SLHCSTLKYG DSDVSV
Sbjct: 130 NSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189

Query: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGI 240
           VNCFITMYMKCGSVN+AQ LFDEMP KGLISWNAMVSGYAQNGLA NVLELY NM+++G+
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300
           HPDP TLVGVLSSCANLGAQSVG EVE KIQASGFT+N FLNNALINMYARCGNLTKAQA
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQA 309

Query: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGL 360
           +FD MPERTLVSWTAIIGGYGMHGHGEIAVQLF++MIRSGI PDGTAFV VLSACSHAGL
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369

Query: 361 TSQGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALL 420
           T QG+EYFKMM RNYQLEPGPEHYSCMVDLLGRAGRL EA+ LIESM I+PDGAVWGALL
Sbjct: 370 TDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL 429

Query: 421 GACKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKK 480
           GACKIH+NV+LAELAFERV+ELEP NIGYYVLLSNIY++  NSKGVLRIRIMMKE+KLKK
Sbjct: 430 GACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKK 489

Query: 481 DPGCSYVELKGRVHPFVVGDRSHPQAEEIYRLLEEL--ALVHEFGEAKRADREESNKDLF 540
           DPGCSYVELKGRVHPF+VGDR+H Q++EIYR+LEEL   ++ EFG+ ++ +REESNKD F
Sbjct: 490 DPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREESNKDGF 549

Query: 541 AGAAGVHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATR 600
               GVHSEKLAVAFGLLNTT G EVVIIKNLRICEDCHLFFK+VSKIVHRQLTVRDATR
Sbjct: 550 T-RVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATR 609

Query: 601 FHHFRNGSCSCKDYW 614
           FHHFRNGSCSCKDYW
Sbjct: 610 FHHFRNGSCSCKDYW 623

BLAST of CmoCh03G011410 vs. TrEMBL
Match: F6HKM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g03150 PE=4 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 1.1e-250
Identity = 413/607 (68.04%), Postives = 498/607 (82.04%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQFHGQII 67
           WN +LRELA++  F +AL+LY QML  GD PNAFTFPFA KSCA+LSLP+ G Q HG +I
Sbjct: 24  WNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVI 83

Query: 68  KVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNSKSSDA 127
           K GCE EPFVQT LISMYC+ S + +ARKVFDE   SR L VCYNALI+GY  NS+ SDA
Sbjct: 84  KTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDA 143

Query: 128 VLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVNCFITM 187
           VLLFRQM +EGV VN+VT+LGLIPVC  PI+L  G SLH  ++++GLD D+SV NC +TM
Sbjct: 144 VLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTM 203

Query: 188 YMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHPDPFTL 247
           Y++CGSV+ A+ LFD MPEKGLI+WNAM+SGYAQNGLA +VL+LY  ME  GI PDP TL
Sbjct: 204 YVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTL 263

Query: 248 VGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALFDEMPE 307
           VGVLSSCA+LGA + GREVE +I+ SGF  N FL NALINMYARCGNL KA+A+FD M E
Sbjct: 264 VGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTE 323

Query: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTSQGMEY 367
           + ++SWTAII GYGMHG GE+AVQLF++MI S  +PDG AFVSVLSACSHAGLT +G+ Y
Sbjct: 324 KNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYY 383

Query: 368 FKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGACKIHQ 427
           F  M R+Y L+PGPEHYSC+VDLLGRAGRL EAR LI SM++EPDGAVWGALLGACKIH+
Sbjct: 384 FTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHR 443

Query: 428 NVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDPGCSYV 487
           NV+LAELAFE+V+E EP NIGYYVLLSNI+++  N +G+LR+R+MM+ERKLKK+PGCSYV
Sbjct: 444 NVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYV 503

Query: 488 ELKGRVHPFVVGDRSHPQAEEIYRLLEELA-LVHEFGEAKRADREESNKDLFAGAAGVHS 547
           E +GR+H F+ GDR+HPQA+EIY +L+ L  ++   G +   D+E  N++L  G  GVHS
Sbjct: 504 EYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDNDQESRNEELITG-MGVHS 563

Query: 548 EKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFHHFRNGS 607
           EKLA+AFGL+NT  GTE+ +IKNLR+C DCHLF K+VS+IV RQL VRDATRFHHF+NG 
Sbjct: 564 EKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGV 623

Query: 608 CSCKDYW 614
           CSCKDYW
Sbjct: 624 CSCKDYW 629

BLAST of CmoCh03G011410 vs. TrEMBL
Match: V4SWJ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011274mg PE=4 SV=1)

HSP 1 Score: 857.1 bits (2213), Expect = 1.3e-245
Identity = 412/612 (67.32%), Postives = 500/612 (81.70%), Query Frame = 1

Query: 3   ALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQF 62
           A ++PWNT+LRELA +  F +ALSLY QML +G  PNAFTFPFALKSC AL LP  G Q 
Sbjct: 27  AATSPWNTRLRELANQSLFTEALSLYRQMLCYGATPNAFTFPFALKSCTALWLPFAGSQL 86

Query: 63  HGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNS 122
           H  +IK GCE EPFV T L+S+YC+  L+ NARKVFDE  +S  LTVCYNALISGYV NS
Sbjct: 87  HCHVIKSGCELEPFVLTSLVSLYCKCRLVDNARKVFDESIKSTHLTVCYNALISGYVLNS 146

Query: 123 KSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVN 182
             S+AV LF +M E+GV +NSVT+L L+P+CV P  L LG+  HC  +K+GLD D SV N
Sbjct: 147 LVSEAVSLFGKMREQGVEINSVTMLCLLPICVDPGYLWLGMCCHCICVKFGLDLDFSVGN 206

Query: 183 CFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHP 242
           C +TMY+KCGSV++ + LFD++PEKGLI+WNAM+SGYAQNGLA +VLELY  M+  G+ P
Sbjct: 207 CLMTMYVKCGSVDYGRKLFDQVPEKGLITWNAMISGYAQNGLATDVLELYREMKSLGVCP 266

Query: 243 DPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALF 302
           D  T VGVLSSCA+LGA SVG EVE +IQA+GF +N FLNNALINMYARCGNL KA+A+F
Sbjct: 267 DAVTFVGVLSSCAHLGAHSVGLEVEQQIQANGFGSNPFLNNALINMYARCGNLKKARAIF 326

Query: 303 DEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTS 362
           D MP +T+VSWTAIIGGYG+HGHGE+AVQLF++M++SGI PDGTAFVSVLSACSHAGLT 
Sbjct: 327 DGMPRKTVVSWTAIIGGYGIHGHGEVAVQLFDEMLKSGIRPDGTAFVSVLSACSHAGLTD 386

Query: 363 QGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGA 422
           +G+EYF  M   Y L+PGPEHY+CMVDLLGRAG+LNEA  LIESM +EPDGAVWGALLGA
Sbjct: 387 KGLEYFYAMKNKYGLQPGPEHYTCMVDLLGRAGQLNEALELIESMLVEPDGAVWGALLGA 446

Query: 423 CKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDP 482
           CKIH+NV+LAELAF +V++LEP N GYYVLLSNIY++ +N  G++R+R+MM+ER+LKKDP
Sbjct: 447 CKIHKNVELAELAFGKVIKLEPMNTGYYVLLSNIYSEARNLDGIMRVRMMMRERRLKKDP 506

Query: 483 GCSYVELKGRVHPFVVGDRSHPQAEEIYRLLEELA-LVHEFGEAKRADREESNKDLFAGA 542
           G SYVELKGRVH F+VG+R+H Q  EIYR+L++L  LV E    KR+D++ S + L    
Sbjct: 507 GYSYVELKGRVHLFMVGERNHHQTVEIYRMLDKLENLVQEHDGTKRSDQKNSEEHL--ND 566

Query: 543 AGVHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFHH 602
             VHSEKLA+AFG++NT+ GTE+V++KNLRIC DCHLF K+VSKIV RQ  VRDATRFHH
Sbjct: 567 TEVHSEKLAIAFGIINTSPGTEIVVMKNLRICGDCHLFIKLVSKIVDRQFIVRDATRFHH 626

Query: 603 FRNGSCSCKDYW 614
           F++G CSCKDYW
Sbjct: 627 FKSGFCSCKDYW 636

BLAST of CmoCh03G011410 vs. TrEMBL
Match: A0A0D2RWW9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G154800 PE=4 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 9.7e-244
Identity = 414/607 (68.20%), Postives = 490/607 (80.72%), Query Frame = 1

Query: 7   PWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQFHGQI 66
           PWNTQLRELAK+CQ+L+AL+LY QMLR G  PNAF+FPFALKS A+L LP+ G Q H Q+
Sbjct: 5   PWNTQLRELAKQCQYLEALTLYRQMLRCGSSPNAFSFPFALKSSASLPLPLSGQQLHCQV 64

Query: 67  IKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNSKSSD 126
           IK GC  EPFV T LISMYC+ S LGNARKVFDE   S +LTVCYNALISGY  NS+  D
Sbjct: 65  IKSGCSQEPFVLTSLISMYCKFSSLGNARKVFDENPISNQLTVCYNALISGYALNSRVFD 124

Query: 127 AVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVNCFIT 186
            + LF +M E GV VNSVT+LGL+PV   P  + +G+  HC  +K GL+ D SV NC +T
Sbjct: 125 VIALFCRMREMGVSVNSVTMLGLVPVFSEPGYISVGMCFHCCCVKLGLNLDFSVANCLVT 184

Query: 187 MYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHPDPFT 246
           MY+KCG++   +NLFDEMP+KGLI+WNAM+SGYAQNGLAA+VLELY  ME  G+ PD  T
Sbjct: 185 MYVKCGAIEFGRNLFDEMPKKGLITWNAMISGYAQNGLAADVLELYRKMETAGVCPDAVT 244

Query: 247 LVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALFDEMP 306
            VGVLSSCANLGA SVG EVE +I++S    N FLNNALINMYARCGNL KA+A+FD MP
Sbjct: 245 FVGVLSSCANLGAVSVGHEVEQRIESSRLGLNPFLNNALINMYARCGNLVKARAIFDGMP 304

Query: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTSQGME 366
            +++VSWTAIIGGYGMHG+GEIAV+LF++MI+SGI PDG AFVSVL ACSHAGLT +G+E
Sbjct: 305 VKSVVSWTAIIGGYGMHGYGEIAVELFDEMIKSGIRPDGAAFVSVLCACSHAGLTEKGLE 364

Query: 367 YFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGACKIH 426
            F  M   ++L+PGPEHYSC+VDLLGRAGRLNEA  LI+SM ++PDGAVWGALLGACKIH
Sbjct: 365 CFSEMKMKHRLQPGPEHYSCVVDLLGRAGRLNEALELIKSMQVKPDGAVWGALLGACKIH 424

Query: 427 QNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDPGCSY 486
           +NV++AELAFE V+E EP NIGYYVLLSNIY++ +N +GVL++R+MM+ERKLKKDPG SY
Sbjct: 425 RNVEMAELAFEGVIEFEPTNIGYYVLLSNIYSEAENLEGVLKVRVMMRERKLKKDPGFSY 484

Query: 487 VELKGRVHPFVVGDRSHPQAEEIYRLLEEL-ALVHEFGEAKRADREESNKDLFAGAAGVH 546
           VE KGRVH F+ GDRSHPQ +EIYR+++EL ALV +    K  D EE          GVH
Sbjct: 485 VEYKGRVHLFLAGDRSHPQKKEIYRMVDELEALVKKLAGCK--DNEERRNIEALLGMGVH 544

Query: 547 SEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFHHFRNG 606
           SEKLA+ FGLLN+  GTE+V+IKNLR+CEDCHLFFK VSKIV RQL VRDATRFHHFR+G
Sbjct: 545 SEKLAIVFGLLNSEPGTEIVVIKNLRMCEDCHLFFKGVSKIVTRQLVVRDATRFHHFRDG 604

Query: 607 SCSCKDY 613
            CSCKDY
Sbjct: 605 HCSCKDY 609

BLAST of CmoCh03G011410 vs. TrEMBL
Match: W9R4V5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019144 PE=4 SV=1)

HSP 1 Score: 847.8 bits (2189), Expect = 8.2e-243
Identity = 398/614 (64.82%), Postives = 488/614 (79.48%), Query Frame = 1

Query: 1   MTALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60
           +T  + PWNT LRELAK+C F +AL+LY +MLR G  PNAFTFPF LKSCA+LSL   G 
Sbjct: 23  LTTTAIPWNTHLRELAKQCLFSEALNLYRRMLRSGQSPNAFTFPFVLKSCASLSLSTAGK 82

Query: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120
             HG +IK+GCE EPFVQT LISMYC+  L+ NARKVFDE  QSR LTVCYNALISGY  
Sbjct: 83  LLHGHVIKIGCEPEPFVQTSLISMYCKCCLVDNARKVFDENPQSRNLTVCYNALISGYTL 142

Query: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180
           NSK  D ++LF +M E GV VNSVT+LGLIP C  P+ L LG+  H   +K GLD D S+
Sbjct: 143 NSKFLDGIVLFSKMRETGVAVNSVTMLGLIPRCAEPVYLALGMCFHGFCVKSGLDIDFSI 202

Query: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGI 240
            NC +TMY+KCGSV +A++LFD MPEKGLI+WNAM+SGYAQNG A  VL+LY  M+L GI
Sbjct: 203 GNCLLTMYVKCGSVQYARSLFDAMPEKGLITWNAMISGYAQNGFATEVLDLYREMKLCGI 262

Query: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300
           + DP TLVGVLSSC +LGA  VGREVE ++Q  GF +N FL N+LINMYARCGNL KA+ 
Sbjct: 263 YLDPVTLVGVLSSCTHLGAHGVGREVEQQVQLCGFDSNPFLKNSLINMYARCGNLVKARE 322

Query: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGL 360
           +FD + E+++VSWT +IGGYG+HGHGEIAVQLFE+MI++GI PD TAFVS++SACSH+G+
Sbjct: 323 IFDSVLEKSIVSWTGVIGGYGVHGHGEIAVQLFEEMIKTGIRPDKTAFVSIISACSHSGM 382

Query: 361 TSQGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALL 420
           T +G+EYF  M   Y L+PGPEHYSC+VDLLGRAGRL EA++LI SM + PDGAVWGALL
Sbjct: 383 TDKGLEYFSAMKSKYGLQPGPEHYSCVVDLLGRAGRLKEAKDLINSMQVNPDGAVWGALL 442

Query: 421 GACKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKK 480
            ACKIH+NV+LAELAFER++ELEP NIGYYVLLSNIY+D +N +GVL++R+M++ER+LKK
Sbjct: 443 NACKIHKNVELAELAFERIIELEPTNIGYYVLLSNIYSDAENLEGVLKVRVMLRERQLKK 502

Query: 481 DPGCSYVELKGRVHPFVVGDRSHPQAEEIYRLLEELA-LVHEFGEAKRADREESNKDLFA 540
           +PGCSYVELKG+VH F+ GD++H Q  +IY +L+EL   V + G     D +    +   
Sbjct: 503 EPGCSYVELKGKVHMFLAGDKTHSQTADIYGMLDELENSVKQLGGPNGEDHKRRKGEEQL 562

Query: 541 GAAGVHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRF 600
              GVHSEKLA+AFGL+NT+ GTE+V+IKNLR C DCHLF K+VSKIV R+  VRDATRF
Sbjct: 563 IGEGVHSEKLAIAFGLVNTSPGTEIVVIKNLRACGDCHLFIKLVSKIVDRKFVVRDATRF 622

Query: 601 HHFRNGSCSCKDYW 614
           HHF++G CSC+DYW
Sbjct: 623 HHFKDGVCSCRDYW 636

BLAST of CmoCh03G011410 vs. TAIR10
Match: AT3G11460.1 (AT3G11460.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 800.4 bits (2066), Expect = 7.6e-232
Identity = 384/610 (62.95%), Postives = 478/610 (78.36%), Query Frame = 1

Query: 5   STPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQFHG 64
           STPWN +LRELA +  F +++SLY  MLR G  P+AF+FPF LKSCA+LSLP+ G Q H 
Sbjct: 18  STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77

Query: 65  QIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNSKS 124
            + K GCE+EPFV T LISMYC+  L+ +ARKVF+E  QS +L+VCYNALISGY +NSK 
Sbjct: 78  HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137

Query: 125 SDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVNCF 184
           +DA  +FR+M E GV V+SVT+LGL+P+C  P  L LG SLH   +K GLDS+V+V+N F
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197

Query: 185 ITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHPDP 244
           ITMYMKCGSV   + LFDEMP KGLI+WNA++SGY+QNGLA +VLELY  M+  G+ PDP
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257

Query: 245 FTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALFDE 304
           FTLV VLSSCA+LGA+ +G EV   ++++GF  N F++NA I+MYARCGNL KA+A+FD 
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317

Query: 305 MPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTSQG 364
           MP ++LVSWTA+IG YGMHG GEI + LF+DMI+ GI PDG  FV VLSACSH+GLT +G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377

Query: 365 MEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGACK 424
           +E F+ M R Y+LEPGPEHYSC+VDLLGRAGRL+EA   IESM +EPDGAVWGALLGACK
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437

Query: 425 IHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDPGC 484
           IH+NV +AELAF +V+E EP NIGYYVL+SNIY+D+KN +G+ RIR+MM+ER  +K PG 
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497

Query: 485 SYVELKGRVHPFVVGDRSHPQAEEIYRLLEEL-ALVHEFGEAKRADREESNKDLFAGAAG 544
           SYVE KGRVH F+ GDRSH Q EE++R+L+EL   V E       DR E      +    
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEE----VSSTTR 557

Query: 545 VHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFHHFR 604
            HSE+LA+AFG+LN+  GTE+++IKNLR+CEDCH+F K VSKIV RQ  VRDA+RFH+F+
Sbjct: 558 EHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFK 617

Query: 605 NGSCSCKDYW 614
           +G CSCKDYW
Sbjct: 618 DGVCSCKDYW 623

BLAST of CmoCh03G011410 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 495.7 bits (1275), Expect = 4.0e-140
Identity = 252/640 (39.38%), Postives = 370/640 (57.81%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQFHGQII 67
           WNT  R  A     + AL LY  M+  G  PN++TFPF LKSCA       G Q HG ++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 68  KVGCESEPFVQTGLISMYCRGSLLGNARKVFDEK---------------------SQSRK 127
           K+GC+ + +V T LISMY +   L +A KVFD+                        ++K
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 128 L--------TVCYNALISGYVSNSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPIN 187
           L         V +NA+ISGY       +A+ LF+ M +  V  +  T++ ++  C    +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281

Query: 188 LELGLSLHCSTLKYGLDSDVSVVNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSG 247
           +ELG  +H     +G  S++ +VN  I +Y KCG +  A  LF+ +P K +ISWN ++ G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341

Query: 248 YAQNGLAANVLELYHNMELHGIHPDPFTLVGVLSSCANLGAQSVGREVELKI--QASGFT 307
           Y    L    L L+  M   G  P+  T++ +L +CA+LGA  +GR + + I  +  G T
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401

Query: 308 NNQFLNNALINMYARCGNLTKAQALFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDM 367
           N   L  +LI+MYA+CG++  A  +F+ +  ++L SW A+I G+ MHG  + +  LF  M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461

Query: 368 IRSGIVPDGTAFVSVLSACSHAGLTSQGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGR 427
            + GI PD   FV +LSACSH+G+   G   F+ M ++Y++ P  EHY CM+DLLG +G 
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGL 521

Query: 428 LNEARNLIESMAIEPDGAVWGALLGACKIHQNVKLAELAFERVVELEPANIGYYVLLSNI 487
             EA  +I  M +EPDG +W +LL ACK+H NV+L E   E ++++EP N G YVLLSNI
Sbjct: 522 FKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 581

Query: 488 YNDTKNSKGVLRIRIMMKERKLKKDPGCSYVELKGRVHPFVVGDRSHPQAEEIYRLLEEL 547
           Y        V + R ++ ++ +KK PGCS +E+   VH F++GD+ HP+  EIY +LEE+
Sbjct: 582 YASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641

Query: 548 ALVHE---FGEAKRADREESNKDLFAGAAGVHSEKLAVAFGLLNTTAGTEVVIIKNLRIC 607
            ++ E   F        +E  ++   GA   HSEKLA+AFGL++T  GT++ I+KNLR+C
Sbjct: 642 EVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 701

Query: 608 EDCHLFFKIVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614
            +CH   K++SKI  R++  RD TRFHHFR+G CSC DYW
Sbjct: 702 RNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

BLAST of CmoCh03G011410 vs. TAIR10
Match: AT4G30700.1 (AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 487.6 bits (1254), Expect = 1.1e-137
Identity = 255/613 (41.60%), Postives = 365/613 (59.54%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYTQMLRHG-DHPNAFTFPFALKSCAALSLPILGGQFHGQI 67
           WNT +    K   +++++ ++  ++       +  T    L + A L    LG Q H   
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247

Query: 68  IKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNSKSSD 127
            K GC S  +V TG IS+Y +   +     +F E  +     V YNA+I GY SN ++  
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD--IVAYNAMIHGYTSNGETEL 307

Query: 128 AVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVNCFIT 187
           ++ LF+++   G  + S TL+ L+PV     +L L  ++H   LK    S  SV     T
Sbjct: 308 SLSLFKELMLSGARLRSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTT 367

Query: 188 MYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHPDPFT 247
           +Y K   +  A+ LFDE PEK L SWNAM+SGY QNGL  + + L+  M+     P+P T
Sbjct: 368 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 427

Query: 248 LVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALFDEMP 307
           +  +LS+CA LGA S+G+ V   ++++ F ++ +++ ALI MYA+CG++ +A+ LFD M 
Sbjct: 428 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 487

Query: 308 ERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTSQGME 367
           ++  V+W  +I GYG+HG G+ A+ +F +M+ SGI P    F+ VL ACSHAGL  +G E
Sbjct: 488 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDE 547

Query: 368 YFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGACKIH 427
            F  M   Y  EP  +HY+CMVD+LGRAG L  A   IE+M+IEP  +VW  LLGAC+IH
Sbjct: 548 IFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 607

Query: 428 QNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDPGCSY 487
           ++  LA    E++ EL+P N+GY+VLLSNI++  +N      +R   K+RKL K PG + 
Sbjct: 608 KDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 667

Query: 488 VELKGRVHPFVVGDRSHPQAEEIYRLLEEL-ALVHEFG-----EAKRADREESNKDLFAG 547
           +E+    H F  GD+SHPQ +EIY  LE+L   + E G     E    D EE  ++L   
Sbjct: 668 IEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELM-- 727

Query: 548 AAGVHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFH 607
              VHSE+LA+AFGL+ T  GTE+ IIKNLR+C DCH   K++SKI  R + VRDA RFH
Sbjct: 728 -VKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFH 787

Query: 608 HFRNGSCSCKDYW 614
           HF++G CSC DYW
Sbjct: 788 HFKDGVCSCGDYW 792

BLAST of CmoCh03G011410 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 485.7 bits (1249), Expect = 4.1e-137
Identity = 248/608 (40.79%), Postives = 364/608 (59.87%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQFHGQII 67
           WNT +   ++      AL +   M      P+  T    L + +AL L  +G + HG  +
Sbjct: 204 WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263

Query: 68  KVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNSKSSDA 127
           + G +S   + T L+ MY +   L  AR++FD      +  V +N++I  YV N    +A
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFD--GMLERNVVSWNSMIDAYVQNENPKEA 323

Query: 128 VLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVNCFITM 187
           +L+F++M +EGV    V+++G +  C    +LE G  +H  +++ GLD +VSVVN  I+M
Sbjct: 324 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 383

Query: 188 YMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHPDPFTL 247
           Y KC  V+ A ++F ++  + L+SWNAM+ G+AQNG   + L  +  M    + PD FT 
Sbjct: 384 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 443

Query: 248 VGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALFDEMPE 307
           V V+++ A L      + +   +  S    N F+  AL++MYA+CG +  A+ +FD M E
Sbjct: 444 VSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 503

Query: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTSQGMEY 367
           R + +W A+I GYG HG G+ A++LFE+M +  I P+G  F+SV+SACSH+GL   G++ 
Sbjct: 504 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC 563

Query: 368 FKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGACKIHQ 427
           F MM  NY +E   +HY  MVDLLGRAGRLNEA + I  M ++P   V+GA+LGAC+IH+
Sbjct: 564 FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK 623

Query: 428 NVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDPGCSYV 487
           NV  AE A ER+ EL P + GY+VLL+NIY      + V ++R+ M  + L+K PGCS V
Sbjct: 624 NVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 683

Query: 488 ELKGRVHPFVVGDRSHPQAEEIYRLLEELAL-VHEFGEAKRADREES-NKDLFAGAAGVH 547
           E+K  VH F  G  +HP +++IY  LE+L   + E G     +       D+       H
Sbjct: 684 EIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTH 743

Query: 548 SEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFHHFRNG 607
           SEKLA++FGLLNTTAGT + + KNLR+C DCH   K +S +  R++ VRD  RFHHF+NG
Sbjct: 744 SEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNG 803

Query: 608 SCSCKDYW 614
           +CSC DYW
Sbjct: 804 ACSCGDYW 809

BLAST of CmoCh03G011410 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 485.3 bits (1248), Expect = 5.4e-137
Identity = 236/610 (38.69%), Postives = 380/610 (62.30%), Query Frame = 1

Query: 7   PWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQFHGQI 66
           PWN  +R  ++   F  AL +Y+ M      P++FTFP  LK+C+ LS   +G   H Q+
Sbjct: 86  PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145

Query: 67  IKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNSKSSD 126
            ++G +++ FVQ GLI++Y +   LG+AR VF+      +  V + A++S Y  N +  +
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205

Query: 127 AVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVNCFIT 186
           A+ +F QM +  V  + V L+ ++       +L+ G S+H S +K GL+ +  ++    T
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265

Query: 187 MYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHPDPFT 246
           MY KCG V  A+ LFD+M    LI WNAM+SGYA+NG A   ++++H M    + PD  +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 247 LVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALFDEMP 306
           +   +S+CA +G+    R +   +  S + ++ F+++ALI+M+A+CG++  A+ +FD   
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTSQGME 366
           +R +V W+A+I GYG+HG    A+ L+  M R G+ P+   F+ +L AC+H+G+  +G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 367 YFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGACKIH 426
           +F  M  ++++ P  +HY+C++DLLGRAG L++A  +I+ M ++P   VWGALL ACK H
Sbjct: 446 FFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 505

Query: 427 QNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDPGCSY 486
           ++V+L E A +++  ++P+N G+YV LSN+Y   +    V  +R+ MKE+ L KD GCS+
Sbjct: 506 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 565

Query: 487 VELKGRVHPFVVGDRSHPQAEEIYRLLEEL-ALVHE--FGEAKRADREESNKDLFAGAAG 546
           VE++GR+  F VGD+SHP+ EEI R +E + + + E  F   K A   + N +       
Sbjct: 566 VEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLC 625

Query: 547 VHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFHHFR 606
            HSE++A+A+GL++T  GT + I KNLR C +CH   K++SK+V R++ VRD  RFHHF+
Sbjct: 626 SHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFK 685

Query: 607 NGSCSCKDYW 614
           +G CSC DYW
Sbjct: 686 DGVCSCGDYW 694

BLAST of CmoCh03G011410 vs. NCBI nr
Match: gi|449451271|ref|XP_004143385.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Cucumis sativus])

HSP 1 Score: 1090.1 bits (2818), Expect = 0.0e+00
Identity = 532/615 (86.50%), Postives = 567/615 (92.20%), Query Frame = 1

Query: 1   MTALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60
           M ALSTPWNTQLRELAKRCQFLQALSLY QMLRHGD PNAFTFPFALKSCAALSLPILG 
Sbjct: 10  MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGS 69

Query: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120
           QFHGQI KVGC  EPFVQTGLISMYC+GSL+ NARKVF+E   SRKLTVCYNAL+SGYVS
Sbjct: 70  QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 129

Query: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180
           NSK S+AVLLFRQMNEEGVPVNSVTLLGLIP CVSPINLELG SLHCSTLKYG DSDVSV
Sbjct: 130 NSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189

Query: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGI 240
           VNCFITMYMKCGSVN+AQ LFDEMP KGLISWNAMVSGYAQNGLA NVLELY NM+++G+
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300
           HPDP TLVGVLSSCANLGAQSVG EVE KIQASGFT+N FLNNALINMYARCGNLTKAQA
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQA 309

Query: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGL 360
           +FD MPERTLVSWTAIIGGYGMHGHGEIAVQLF++MIRSGI PDGTAFV VLSACSHAGL
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369

Query: 361 TSQGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALL 420
           T QG+EYFKMM RNYQLEPGPEHYSCMVDLLGRAGRL EA+ LIESM I+PDGAVWGALL
Sbjct: 370 TDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL 429

Query: 421 GACKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKK 480
           GACKIH+NV+LAELAFERV+ELEP NIGYYVLLSNIY++  NSKGVLRIRIMMKE+KLKK
Sbjct: 430 GACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKK 489

Query: 481 DPGCSYVELKGRVHPFVVGDRSHPQAEEIYRLLEEL--ALVHEFGEAKRADREESNKDLF 540
           DPGCSYVELKGRVHPF+VGDR+H Q++EIYR+LEEL   ++ EFG+ ++ +REESNKD F
Sbjct: 490 DPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREESNKDGF 549

Query: 541 AGAAGVHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATR 600
               GVHSEKLAVAFGLLNTT G EVVIIKNLRICEDCHLFFK+VSKIVHRQLTVRDATR
Sbjct: 550 T-RVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATR 609

Query: 601 FHHFRNGSCSCKDYW 614
           FHHFRNGSCSCKDYW
Sbjct: 610 FHHFRNGSCSCKDYW 623

BLAST of CmoCh03G011410 vs. NCBI nr
Match: gi|659125232|ref|XP_008462579.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Cucumis melo])

HSP 1 Score: 1088.2 bits (2813), Expect = 0.0e+00
Identity = 531/615 (86.34%), Postives = 564/615 (91.71%), Query Frame = 1

Query: 1   MTALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60
           M ALSTPWNTQLRELAKRCQFLQALSLY QMLRHGD PNAFTFPFALKSCAALS PILGG
Sbjct: 10  MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSHPILGG 69

Query: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120
           QFHGQIIKVGC  EPFVQTGLISMYC+GSL+ NARKVFDE   SRKLTVCYNALISGY S
Sbjct: 70  QFHGQIIKVGCIFEPFVQTGLISMYCKGSLVENARKVFDENFHSRKLTVCYNALISGYAS 129

Query: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180
           NSK SDAVLLFRQMNEEG+PVNSVTLLGLIP CVSPINLELG SLHCSTLKYG DS+VSV
Sbjct: 130 NSKCSDAVLLFRQMNEEGIPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSEVSV 189

Query: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGI 240
           VNCFITMYMKCGSVN+AQ LFDEMP KGLISWNAMVSGYAQNGLA NVLELY NM+++G+
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300
            PDP TLVGVLSSCANLGAQSVG  VE KIQASGFTNN FLNNALINMYARCGNLTKAQ+
Sbjct: 250 RPDPITLVGVLSSCANLGAQSVGHAVEFKIQASGFTNNPFLNNALINMYARCGNLTKAQS 309

Query: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGL 360
           +FD MPERTLVSWTAIIGGYGMHGHGEIAVQLF++MIRSGI PDGTAFV VLSACSHAGL
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369

Query: 361 TSQGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALL 420
           T QG+EYFKMM RNY+LEPG EHYSCMVDLLGRAGRL EA+NLIESM I+PDGAVWGALL
Sbjct: 370 TDQGLEYFKMMKRNYRLEPGQEHYSCMVDLLGRAGRLKEAQNLIESMPIKPDGAVWGALL 429

Query: 421 GACKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKK 480
           GACKIH+NV+LAELAFERV+E EP NIGYYVLLSNIY+D  NSKGVLRIRIMMKE+KLKK
Sbjct: 430 GACKIHKNVELAELAFERVIEHEPENIGYYVLLSNIYSDANNSKGVLRIRIMMKEKKLKK 489

Query: 481 DPGCSYVELKGRVHPFVVGDRSHPQAEEIYRLLEEL--ALVHEFGEAKRADREESNKDLF 540
           DPGCSYVELKGRVHPF+VGDR+HPQ++EIYR+LEEL   ++ EFG+ K+ +REESNKD F
Sbjct: 490 DPGCSYVELKGRVHPFIVGDRNHPQSDEIYRVLEELEAIIMQEFGKPKKDNREESNKDFF 549

Query: 541 AGAAGVHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATR 600
            G  GVHSEKLAVAFGLLNTT G EVVIIKNLRICEDCHLFFK+VSKI  RQLTVRDATR
Sbjct: 550 TG-VGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIADRQLTVRDATR 609

Query: 601 FHHFRNGSCSCKDYW 614
           FHHFRNGSCSCKDYW
Sbjct: 610 FHHFRNGSCSCKDYW 623

BLAST of CmoCh03G011410 vs. NCBI nr
Match: gi|645276950|ref|XP_008243533.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Prunus mume])

HSP 1 Score: 875.5 bits (2261), Expect = 5.3e-251
Identity = 418/614 (68.08%), Postives = 497/614 (80.94%), Query Frame = 1

Query: 1   MTALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60
           M   STPWNT+LREL+K+C F +AL++Y QML HG  PNAFTFPFALKSCAALSLP+ G 
Sbjct: 1   MAQPSTPWNTRLRELSKQCLFFEALTVYRQMLHHGHSPNAFTFPFALKSCAALSLPLAGS 60

Query: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120
             H  ++K GCE EPFVQT LISMYC+  L+ +AR+VFDE   SRKLTVCYNALISG+ S
Sbjct: 61  LLHCHVVKTGCEPEPFVQTSLISMYCKCCLVDDARRVFDENPHSRKLTVCYNALISGHTS 120

Query: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180
           NSK SDAV LFRQM   GV VNSVT+LGL+P C +P++L LG+ LH  ++K G D D+SV
Sbjct: 121 NSKFSDAVSLFRQMRAAGVEVNSVTMLGLVPGCAAPVHLGLGMCLHGCSVKCGFDVDLSV 180

Query: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGI 240
            NC +TMY+KCGSV+HA+ LFD MPEKGLI+WNAM+SGYAQNGLA +VL LY  ME  G+
Sbjct: 181 TNCLLTMYVKCGSVDHARKLFDAMPEKGLITWNAMISGYAQNGLATHVLNLYKEMESCGV 240

Query: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300
            PDP TLVGVLSSC ++GA  VGREVE +I++ GF +N +L+NAL+NMYARCGNL KA A
Sbjct: 241 SPDPVTLVGVLSSCTHIGAHGVGREVERRIESCGFGSNPYLSNALVNMYARCGNLVKAHA 300

Query: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGL 360
           +FD MPE++LVSWTAIIGGYG+HGHGEIA +LF  MI +GI PD   FV++LSACSHAGL
Sbjct: 301 IFDAMPEKSLVSWTAIIGGYGLHGHGEIASELFNKMIMTGIRPDKAVFVTILSACSHAGL 360

Query: 361 TSQGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALL 420
             +G+EYF  M +   L+PGPEHYSCMVDLLGRAGRL EA+ LIESM ++PDGAVWGALL
Sbjct: 361 MDKGLEYFVAMEKRCGLQPGPEHYSCMVDLLGRAGRLQEAKELIESMPVKPDGAVWGALL 420

Query: 421 GACKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKK 480
           GACKIH+NV++AELAFE V+ELEP NIGYYVLLSNIY+D KN +GVL++R+M++ERKLKK
Sbjct: 421 GACKIHKNVEIAELAFEHVIELEPTNIGYYVLLSNIYSDAKNLEGVLKVRVMVRERKLKK 480

Query: 481 DPGCSYVELKGRVHPFVVGDRSHPQAEEIYRLLEEL-ALVHEFGEAKRADREESNKDLFA 540
           +PGCSYVE KGRVH F+ GD++H QAEEIY++LEEL  LV E G  +       N++   
Sbjct: 481 EPGCSYVECKGRVHVFLAGDKTHCQAEEIYKMLEELETLVKEPGRGR-------NEEQLI 540

Query: 541 GAAGVHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRF 600
           G A VHSEKL VAF LLNT  GTE+V+IKNLR+C DCHLF K+VSKIV RQ  VRDATRF
Sbjct: 541 G-ANVHSEKLTVAFALLNTEPGTEIVVIKNLRVCGDCHLFIKLVSKIVDRQFVVRDATRF 600

Query: 601 HHFRNGSCSCKDYW 614
           HHFRNG CSCKDYW
Sbjct: 601 HHFRNGVCSCKDYW 606

BLAST of CmoCh03G011410 vs. NCBI nr
Match: gi|359482011|ref|XP_002276416.2| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Vitis vinifera])

HSP 1 Score: 874.0 bits (2257), Expect = 1.5e-250
Identity = 413/607 (68.04%), Postives = 498/607 (82.04%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGGQFHGQII 67
           WN +LRELA++  F +AL+LY QML  GD PNAFTFPFA KSCA+LSLP+ G Q HG +I
Sbjct: 24  WNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVI 83

Query: 68  KVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVSNSKSSDA 127
           K GCE EPFVQT LISMYC+ S + +ARKVFDE   SR L VCYNALI+GY  NS+ SDA
Sbjct: 84  KTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDA 143

Query: 128 VLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSVVNCFITM 187
           VLLFRQM +EGV VN+VT+LGLIPVC  PI+L  G SLH  ++++GLD D+SV NC +TM
Sbjct: 144 VLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTM 203

Query: 188 YMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGIHPDPFTL 247
           Y++CGSV+ A+ LFD MPEKGLI+WNAM+SGYAQNGLA +VL+LY  ME  GI PDP TL
Sbjct: 204 YVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTL 263

Query: 248 VGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQALFDEMPE 307
           VGVLSSCA+LGA + GREVE +I+ SGF  N FL NALINMYARCGNL KA+A+FD M E
Sbjct: 264 VGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTE 323

Query: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGLTSQGMEY 367
           + ++SWTAII GYGMHG GE+AVQLF++MI S  +PDG AFVSVLSACSHAGLT +G+ Y
Sbjct: 324 KNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYY 383

Query: 368 FKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALLGACKIHQ 427
           F  M R+Y L+PGPEHYSC+VDLLGRAGRL EAR LI SM++EPDGAVWGALLGACKIH+
Sbjct: 384 FTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHR 443

Query: 428 NVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKKDPGCSYV 487
           NV+LAELAFE+V+E EP NIGYYVLLSNI+++  N +G+LR+R+MM+ERKLKK+PGCSYV
Sbjct: 444 NVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYV 503

Query: 488 ELKGRVHPFVVGDRSHPQAEEIYRLLEELA-LVHEFGEAKRADREESNKDLFAGAAGVHS 547
           E +GR+H F+ GDR+HPQA+EIY +L+ L  ++   G +   D+E  N++L  G  GVHS
Sbjct: 504 EYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDNDQESRNEELITG-MGVHS 563

Query: 548 EKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRFHHFRNGS 607
           EKLA+AFGL+NT  GTE+ +IKNLR+C DCHLF K+VS+IV RQL VRDATRFHHF+NG 
Sbjct: 564 EKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGV 623

Query: 608 CSCKDYW 614
           CSCKDYW
Sbjct: 624 CSCKDYW 629

BLAST of CmoCh03G011410 vs. NCBI nr
Match: gi|470139849|ref|XP_004305658.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Fragaria vesca subsp. vesca])

HSP 1 Score: 873.2 bits (2255), Expect = 2.6e-250
Identity = 417/614 (67.92%), Postives = 501/614 (81.60%), Query Frame = 1

Query: 1   MTALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60
           MT  ++PWN++LR+LAK+  F +ALSLY QMLR G  PNAFTFPFALKSCAAL+LP+ G 
Sbjct: 1   MTTSTSPWNSRLRDLAKQSLFSEALSLYRQMLRFGHPPNAFTFPFALKSCAALALPLTGS 60

Query: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120
             H  ++K GC+ EPFVQT LISMYC+  L  +ARKVFDE  Q RKLTVCYNALISG+ S
Sbjct: 61  LLHSHVLKTGCDPEPFVQTSLISMYCKCCLTDDARKVFDESPQ-RKLTVCYNALISGHAS 120

Query: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180
           NSK  DAVLLFR+M EEGV VNSVT+LGLIP C +P +L LG+ LH S++K GLDSD+SV
Sbjct: 121 NSKLRDAVLLFRRMREEGVGVNSVTMLGLIPGCAAPGHLSLGMCLHGSSVKCGLDSDLSV 180

Query: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGI 240
            NC +TMY+KCG V++A+ +FD MPEKGLI+WNAM+SGYAQNGLA++VL LY  ME  G 
Sbjct: 181 RNCLLTMYVKCGLVDNARKIFDAMPEKGLITWNAMISGYAQNGLASHVLNLYREMEACGF 240

Query: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300
            PDP TLVGVLSSC +LGA  VGREVE +I++SGF +N +L NALINMY RCGNL +A +
Sbjct: 241 FPDPVTLVGVLSSCTHLGAHGVGREVERRIESSGFGSNPYLKNALINMYTRCGNLVRAHS 300

Query: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGL 360
           +FD MPE++LV+WTAIIGGYGMHGHGE+A++LFE+MI SGI PD   FV+VLSACSHAGL
Sbjct: 301 IFDVMPEKSLVTWTAIIGGYGMHGHGEVALELFEEMIVSGIRPDKAVFVTVLSACSHAGL 360

Query: 361 TSQGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALL 420
           T +G+EYF  M +NY+L+PGPEHYSCMVDLLGRAGRL EA+ LI+SM ++PDG VWGALL
Sbjct: 361 TDEGLEYFAAMEKNYRLQPGPEHYSCMVDLLGRAGRLKEAKELIDSMQVKPDGGVWGALL 420

Query: 421 GACKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKK 480
           GACKIH+NV+LAE+AFE V+ELEP N GYYVL+SNIY+D KN +G+L++R+MMKER+LKK
Sbjct: 421 GACKIHKNVELAEIAFEHVIELEPTNSGYYVLMSNIYSDAKNLEGILKVRVMMKERQLKK 480

Query: 481 DPGCSYVELKGRVHPFVVGDRSHPQAEEIYRLLEELA-LVHEFGEAKRADREESNKDLFA 540
           +PGCSYVE KGRVH F+ GD SH Q E+IY +L+EL  L  E G +   D E  NK+   
Sbjct: 481 EPGCSYVECKGRVHVFLAGDNSHCQTEDIYSILDELENLARELGVSNENDGER-NKE--- 540

Query: 541 GAAGVHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRF 600
              G+HSEKLA+AFGLLNT  GTE+V+IKNLR+C DCHLF K +SKIV RQ  VRDATRF
Sbjct: 541 -RVGIHSEKLAIAFGLLNTEPGTEIVVIKNLRVCADCHLFIKSISKIVQRQFVVRDATRF 600

Query: 601 HHFRNGSCSCKDYW 614
           HHFRNG CSCKDYW
Sbjct: 601 HHFRNGICSCKDYW 608

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP223_ARATH1.3e-23062.95Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis th... [more]
PPR21_ARATH7.1e-13939.38Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
PP341_ARATH1.9e-13641.60Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN... [more]
PPR32_ARATH7.3e-13640.79Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP224_ARATH9.6e-13638.69Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0KFC9_CUCSA0.0e+0086.50Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452690 PE=4 SV=1[more]
F6HKM1_VITVI1.1e-25068.04Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g03150 PE=4 SV=... [more]
V4SWJ4_9ROSI1.3e-24567.32Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011274mg PE=4 SV=1[more]
A0A0D2RWW9_GOSRA9.7e-24468.20Uncharacterized protein OS=Gossypium raimondii GN=B456_006G154800 PE=4 SV=1[more]
W9R4V5_9ROSA8.2e-24364.82Uncharacterized protein OS=Morus notabilis GN=L484_019144 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G11460.17.6e-23262.95 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.14.0e-14039.38 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G30700.11.1e-13741.60 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G11290.14.1e-13740.79 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G12770.15.4e-13738.69 mitochondrial editing factor 22[more]
Match NameE-valueIdentityDescription
gi|449451271|ref|XP_004143385.1|0.0e+0086.50PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Cucum... [more]
gi|659125232|ref|XP_008462579.1|0.0e+0086.34PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Cucum... [more]
gi|645276950|ref|XP_008243533.1|5.3e-25168.08PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Prunu... [more]
gi|359482011|ref|XP_002276416.2|1.5e-25068.04PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Vitis... [more]
gi|470139849|ref|XP_004305658.1|2.6e-25067.92PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Fraga... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016554 cytidine to uridine editing
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G011410.1CmoCh03G011410.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 181..209
score: 5.9E-4coord: 283..308
score: 2.7E-5coord: 383..407
score: 0.02coord: 210..240
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 108..150
score: 2.1E-9coord: 310..356
score: 7.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 311..344
score: 2.1E-7coord: 210..243
score: 1.2E-5coord: 283..308
score: 0.003coord: 109..142
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 344..374
score: 6.982coord: 309..343
score: 11.345coord: 278..308
score: 9.372coord: 177..207
score: 8.451coord: 4..38
score: 7.618coord: 74..104
score: 5.897coord: 107..141
score: 9.898coord: 208..242
score: 10.676coord: 243..277
score: 5.251coord: 380..410
score: 7
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 375..463
score: 1.2E-6coord: 281..305
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 6..487
score:
NoneNo IPR availablePANTHERPTHR24015:SF505SUBFAMILY NOT NAMEDcoord: 6..487
score:

The following gene(s) are paralogous to this gene:

None