ClCG04G010100 (gene) Watermelon (Charleston Gray)

NameClCG04G010100
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionPentatricopeptide repeat-containing protein
LocationCG_Chr04 : 25052141 .. 25053982 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGCTCTCTCAACGCCATGGAACACTCAACTCAGAGAATTAGCAAAACGATGTCAATTTCTTCAAGCTCTAAGTCTCTATCCCCAACTACTTCGCCATGGTGGGCGCCCCAATGCCTTCACTTTCCCGTTTGCTCTCAAATCCTGCGCGGCCCTTTCCCTCCCTATACTCGGCGAACAATTCCATGGTCAAATTATCAAAGTTGGGTGTGAATTCGAACCTTTTGTGCAAACTGGTTTGATTTCTATGTATTGCAGAGGCACTTTGGTCGAGAATGCCCGTAAAGTGTTCGATGAGAATTCCCAGTCCAGAAAGCTTAGTGTTTGCTACAATGCTTTGATTTCCGGCTATGTTTCGAATTCAAAATGTTCTGACGCGGTTCTTTTGTTTCGCCAAATGAATGAAGAGGGTGTCCCTGTTAATTCAGTTACGTTGCTGGGTTTGATCCCAGTTTGTGTTTCTCCGATTAATTTAGAGCTTGGATCGTCTCTACATGGCTCCACATTGAAATATGGATTGGATTCAGATGTCTCTGTTGTTAACTGCTTTATTACTATGTACATGAAATGTGGCTCGGTTGATTATGCACAGAAGCTGTTTGATGAAATGCCTGTGAAGGGTTTGATCTCTTGGAACGCTATGGTTTCTGGGTACGCGCAAAATGGGATGGCAACTAATGTTTTGGAGCTCTATCGTAACATGGATATGCATGGGGTTCGCCCGGATCCTGTAACTCATGTTGGGGTTTTATCATCTTGCGCTAACCTTGGGGCTCAGAGTGTTGGCCATGAGGTAGAATTAAAGATTCAAGCAAGTGGGTTTAACAATAATCCGTTTCTGAATAATGCTTTGATCAATATGTACGCAAGGTGTGGCAATTTAACAAAGGCACAAGCCGTGTTTGATGAAATGCCTGAGAGAACATTAGTTTCATGGACAGCAATTATAGGTGGCTATGGAATGCATGGACATGGAGAAATTGCAGTGCAGCTTTTCGAAGAGATGATAAGGAGTGGCATTGTACCTGATGGAACTGCATTTGTGAGTGTCTTGTCTGCCTGTAGCCATGCAGGGCTCACTGATCAGGGCTTGGAATACTTCAAAATGATGACGAGAAAATATCAATTGCAACCAGGTCCAGAGCATTATTCGTGTATCGTGGATCTTCTGGGGCGAGCAGGGCGGCTTAACGAAGCTCGAAATCTCATTGAATCCATGCCAATAAAGCCTGATGGTGCCGTCTGGGGAGCTCTTCTGGGTGCTTGTAAGATCCACAAGAATGTTGAGTTAGCAGAGTTGGCTTTTGAACATGTGATCGAGCTTGAACCTGCAAACATAGGATACTATGTCTTATTGTCAAACATTTACTATGATGCCAAGAACTCAAAAGGGGTTTTGAGGATCCGGTTTATGATGAAGCAGAGAAAGTTGAAGAAGGACCCTGGATGTAGCTATGTTGAATTGAAGGGCAGAGTTCATCCATTTATAGTTGGGGATAGAAACCATCCTCAGGCTGAAGAGATATATAGAGTTTTGGAAGAGTTAGAAGCGCTAGTACAGAAATTTGGAGAGCCTAAGAAGGATGATAGAGATGAAAGCAACAAAGATTTGTTAACTGGAGTTGGAGTTCATAGCGAAAAATTGGCTGTTGCTTTTGGACTCCTGAATACCATGGCTGGGACCGAAGTTGTGATCATAAAAAATCTTAGGATATGTGAAGATTGTCACTTGTTTTTCAAGATGGTTAGCAAAATTGTCCATCGTCAGTTAACTGTTAGAGATCCTACTCGCTTCCACCATTTTAAAAATGGGAGCTGTTCTTGTAAAGATTATTGGTAG

mRNA sequence

ATGAACGCTCTCTCAACGCCATGGAACACTCAACTCAGAGAATTAGCAAAACGATGTCAATTTCTTCAAGCTCTAAGTCTCTATCCCCAACTACTTCGCCATGGTGGGCGCCCCAATGCCTTCACTTTCCCGTTTGCTCTCAAATCCTGCGCGGCCCTTTCCCTCCCTATACTCGGCGAACAATTCCATGGTCAAATTATCAAAGTTGGGTGTGAATTCGAACCTTTTGTGCAAACTGGTTTGATTTCTATGTATTGCAGAGGCACTTTGGTCGAGAATGCCCGTAAAGTGTTCGATGAGAATTCCCAGTCCAGAAAGCTTAGTGTTTGCTACAATGCTTTGATTTCCGGCTATGTTTCGAATTCAAAATGTTCTGACGCGGTTCTTTTGTTTCGCCAAATGAATGAAGAGGGTGTCCCTGTTAATTCAGTTACGTTGCTGGGTTTGATCCCAGTTTGTGTTTCTCCGATTAATTTAGAGCTTGGATCGTCTCTACATGGCTCCACATTGAAATATGGATTGGATTCAGATGTCTCTGTTGTTAACTGCTTTATTACTATGTACATGAAATGTGGCTCGGTTGATTATGCACAGAAGCTGTTTGATGAAATGCCTGTGAAGGGTTTGATCTCTTGGAACGCTATGGTTTCTGGGTACGCGCAAAATGGGATGGCAACTAATGTTTTGGAGCTCTATCGTAACATGGATATGCATGGGGTTCGCCCGGATCCTGTAACTCATGTTGGGGTTTTATCATCTTGCGCTAACCTTGGGGCTCAGAGTGTTGGCCATGAGGTAGAATTAAAGATTCAAGCAAGTGGGTTTAACAATAATCCGTTTCTGAATAATGCTTTGATCAATATGTACGCAAGGTGTGGCAATTTAACAAAGGCACAAGCCGTGTTTGATGAAATGCCTGAGAGAACATTAGTTTCATGGACAGCAATTATAGGTGGCTATGGAATGCATGGACATGGAGAAATTGCAGTGCAGCTTTTCGAAGAGATGATAAGGAGTGGCATTGTACCTGATGGAACTGCATTTGTGAGTGTCTTGTCTGCCTGTAGCCATGCAGGGCTCACTGATCAGGGCTTGGAATACTTCAAAATGATGACGAGAAAATATCAATTGCAACCAGGTCCAGAGCATTATTCGTGTATCGTGGATCTTCTGGGGCGAGCAGGGCGGCTTAACGAAGCTCGAAATCTCATTGAATCCATGCCAATAAAGCCTGATGGTGCCGTCTGGGGAGCTCTTCTGGGTGCTTGTAAGATCCACAAGAATGTTGAGTTAGCAGAGTTGGCTTTTGAACATGTGATCGAGCTTGAACCTGCAAACATAGGATACTATGTCTTATTGTCAAACATTTACTATGATGCCAAGAACTCAAAAGGGGTTTTGAGGATCCGGTTTATGATGAAGCAGAGAAAGTTGAAGAAGGACCCTGGATGTAGCTATGTTGAATTGAAGGGCAGAGTTCATCCATTTATAGTTGGGGATAGAAACCATCCTCAGGCTGAAGAGATATATAGAGTTTTGGAAGAGTTAGAAGCGCTAGTACAGAAATTTGGAGAGCCTAAGAAGGATGATAGAGATGAAAGCAACAAAGATTTGTTAACTGGAGTTGGAGTTCATAGCGAAAAATTGGCTGTTGCTTTTGGACTCCTGAATACCATGGCTGGGACCGAAGTTGTGATCATAAAAAATCTTAGGATATGTGAAGATTGTCACTTGTTTTTCAAGATGGTTAGCAAAATTGTCCATCGTCAGTTAACTGTTAGAGATCCTACTCGCTTCCACCATTTTAAAAATGGGAGCTGTTCTTGTAAAGATTATTGGTAG

Coding sequence (CDS)

ATGAACGCTCTCTCAACGCCATGGAACACTCAACTCAGAGAATTAGCAAAACGATGTCAATTTCTTCAAGCTCTAAGTCTCTATCCCCAACTACTTCGCCATGGTGGGCGCCCCAATGCCTTCACTTTCCCGTTTGCTCTCAAATCCTGCGCGGCCCTTTCCCTCCCTATACTCGGCGAACAATTCCATGGTCAAATTATCAAAGTTGGGTGTGAATTCGAACCTTTTGTGCAAACTGGTTTGATTTCTATGTATTGCAGAGGCACTTTGGTCGAGAATGCCCGTAAAGTGTTCGATGAGAATTCCCAGTCCAGAAAGCTTAGTGTTTGCTACAATGCTTTGATTTCCGGCTATGTTTCGAATTCAAAATGTTCTGACGCGGTTCTTTTGTTTCGCCAAATGAATGAAGAGGGTGTCCCTGTTAATTCAGTTACGTTGCTGGGTTTGATCCCAGTTTGTGTTTCTCCGATTAATTTAGAGCTTGGATCGTCTCTACATGGCTCCACATTGAAATATGGATTGGATTCAGATGTCTCTGTTGTTAACTGCTTTATTACTATGTACATGAAATGTGGCTCGGTTGATTATGCACAGAAGCTGTTTGATGAAATGCCTGTGAAGGGTTTGATCTCTTGGAACGCTATGGTTTCTGGGTACGCGCAAAATGGGATGGCAACTAATGTTTTGGAGCTCTATCGTAACATGGATATGCATGGGGTTCGCCCGGATCCTGTAACTCATGTTGGGGTTTTATCATCTTGCGCTAACCTTGGGGCTCAGAGTGTTGGCCATGAGGTAGAATTAAAGATTCAAGCAAGTGGGTTTAACAATAATCCGTTTCTGAATAATGCTTTGATCAATATGTACGCAAGGTGTGGCAATTTAACAAAGGCACAAGCCGTGTTTGATGAAATGCCTGAGAGAACATTAGTTTCATGGACAGCAATTATAGGTGGCTATGGAATGCATGGACATGGAGAAATTGCAGTGCAGCTTTTCGAAGAGATGATAAGGAGTGGCATTGTACCTGATGGAACTGCATTTGTGAGTGTCTTGTCTGCCTGTAGCCATGCAGGGCTCACTGATCAGGGCTTGGAATACTTCAAAATGATGACGAGAAAATATCAATTGCAACCAGGTCCAGAGCATTATTCGTGTATCGTGGATCTTCTGGGGCGAGCAGGGCGGCTTAACGAAGCTCGAAATCTCATTGAATCCATGCCAATAAAGCCTGATGGTGCCGTCTGGGGAGCTCTTCTGGGTGCTTGTAAGATCCACAAGAATGTTGAGTTAGCAGAGTTGGCTTTTGAACATGTGATCGAGCTTGAACCTGCAAACATAGGATACTATGTCTTATTGTCAAACATTTACTATGATGCCAAGAACTCAAAAGGGGTTTTGAGGATCCGGTTTATGATGAAGCAGAGAAAGTTGAAGAAGGACCCTGGATGTAGCTATGTTGAATTGAAGGGCAGAGTTCATCCATTTATAGTTGGGGATAGAAACCATCCTCAGGCTGAAGAGATATATAGAGTTTTGGAAGAGTTAGAAGCGCTAGTACAGAAATTTGGAGAGCCTAAGAAGGATGATAGAGATGAAAGCAACAAAGATTTGTTAACTGGAGTTGGAGTTCATAGCGAAAAATTGGCTGTTGCTTTTGGACTCCTGAATACCATGGCTGGGACCGAAGTTGTGATCATAAAAAATCTTAGGATATGTGAAGATTGTCACTTGTTTTTCAAGATGGTTAGCAAAATTGTCCATCGTCAGTTAACTGTTAGAGATCCTACTCGCTTCCACCATTTTAAAAATGGGAGCTGTTCTTGTAAAGATTATTGGTAG

Protein sequence

MNALSTPWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHGQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGCSYVELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDDRDESNKDLLTGVGVHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFKNGSCSCKDYW
BLAST of ClCG04G010100 vs. Swiss-Prot
Match: PP223_ARATH (Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 806.2 bits (2081), Expect = 2.5e-232
Identity = 388/609 (63.71%), Postives = 483/609 (79.31%), Query Frame = 1

Query: 5   STPWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHG 64
           STPWN +LRELA +  F +++SLY  +LR G  P+AF+FPF LKSCA+LSLP+ G+Q H 
Sbjct: 18  STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77

Query: 65  QIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKC 124
            + K GCE EPFV T LISMYC+  LV +ARKVF+EN QS +LSVCYNALISGY +NSK 
Sbjct: 78  HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137

Query: 125 SDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCF 184
           +DA  +FR+M E GV V+SVT+LGL+P+C  P  L LG SLHG  +K GLDS+V+V+N F
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197

Query: 185 ITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDP 244
           ITMYMKCGSV+  ++LFDEMPVKGLI+WNA++SGY+QNG+A +VLELY  M   GV PDP
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257

Query: 245 VTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDE 304
            T V VLSSCA+LGA+ +GHEV   ++++GF  N F++NA I+MYARCGNL KA+AVFD 
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317

Query: 305 MPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQG 364
           MP ++LVSWTA+IG YGMHG GEI + LF++MI+ GI PDG  FV VLSACSH+GLTD+G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377

Query: 365 LEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACK 424
           LE F+ M R+Y+L+PGPEHYSC+VDLLGRAGRL+EA   IESMP++PDGAVWGALLGACK
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437

Query: 425 IHKNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGC 484
           IHKNV++AELAF  VIE EP NIGYYVL+SNIY D+KN +G+ RIR MM++R  +K PG 
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497

Query: 485 SYVELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDDRDESNKDLLTGVGV 544
           SYVE KGRVH F+ GDR+H Q EE++R+L+ELE  V +       DR E   ++ +    
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGE---EVSSTTRE 557

Query: 545 HSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFKN 604
           HSE+LA+AFG+LN++ GTE+++IKNLR+CEDCH+F K VSKIV RQ  VRD +RFH+FK+
Sbjct: 558 HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKD 617

Query: 605 GSCSCKDYW 614
           G CSCKDYW
Sbjct: 618 GVCSCKDYW 623

BLAST of ClCG04G010100 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 7.8e-138
Identity = 257/643 (39.97%), Postives = 375/643 (58.32%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHGQII 67
           WNT  R  A     + AL LY  ++  G  PN++TFPF LKSCA       G+Q HG ++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 68  KVGCEFEPFVQTGLISMYCRGTLVENARKVFD-----------------------ENSQS 127
           K+GC+ + +V T LISMY +   +E+A KVFD                       EN+Q 
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 128 R------KLSVCYNALISGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPIN 187
                  K  V +NA+ISGY       +A+ LF+ M +  V  +  T++ ++  C    +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281

Query: 188 LELGSSLHGSTLKYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSG 247
           +ELG  +H     +G  S++ +VN  I +Y KCG ++ A  LF+ +P K +ISWN ++ G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341

Query: 248 YAQNGMATNVLELYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKI--QASGFN 307
           Y    +    L L++ M   G  P+ VT + +L +CA+LGA  +G  + + I  +  G  
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401

Query: 308 NNPFLNNALINMYARCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEM 367
           N   L  +LI+MYA+CG++  A  VF+ +  ++L SW A+I G+ MHG  + +  LF  M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461

Query: 368 IRSGIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGR 427
            + GI PD   FV +LSACSH+G+ D G   F+ MT+ Y++ P  EHY C++DLLG +G 
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGL 521

Query: 428 LNEARNLIESMPIKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPANIGYYVLLSNI 487
             EA  +I  M ++PDG +W +LL ACK+H NVEL E   E++I++EP N G YVLLSNI
Sbjct: 522 FKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 581

Query: 488 YYDAKNSKGVLRIRFMMKQRKLKKDPGCSYVELKGRVHPFIVGDRNHPQAEEIYRVLEEL 547
           Y  A     V + R ++  + +KK PGCS +E+   VH FI+GD+ HP+  EIY +LEE+
Sbjct: 582 YASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641

Query: 548 EALVQKFG------EPKKDDRDESNKDLLTGVGVHSEKLAVAFGLLNTMAGTEVVIIKNL 607
           E L++K G      E  ++  +E  +  L     HSEKLA+AFGL++T  GT++ I+KNL
Sbjct: 642 EVLLEKAGFVPDTSEVLQEMEEEWKEGALRH---HSEKLAIAFGLISTKPGTKLTIVKNL 701

Query: 608 RICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFKNGSCSCKDYW 614
           R+C +CH   K++SKI  R++  RD TRFHHF++G CSC DYW
Sbjct: 702 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741


HSP 2 Score: 97.1 bits (240), Expect = 7.3e-19
Identity = 68/244 (27.87%), Postives = 118/244 (48.36%), Query Frame = 1

Query: 165 LHGSTLKYGLDSDVSVVN-----CFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGY 224
           +H   +K GL +    ++     C ++ + +   + YA  +F  +    L+ WN M  G+
Sbjct: 52  IHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPYAISVFKTIQEPNLLIWNTMFRGH 111

Query: 225 AQNGMATNVLELYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNP 284
           A +    + L+LY  M   G+ P+  T   VL SCA   A   G ++   +   G + + 
Sbjct: 112 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 171

Query: 285 FLNNALINMYARCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRS 344
           +++ +LI+MY + G L  A  VFD+ P R +VS+TA+I GY   G+ E A +LF+E+   
Sbjct: 172 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI--- 231

Query: 345 GIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNE 404
             V D  ++ +++S  +  G   + LE FK M  K  ++P       +V    ++G +  
Sbjct: 232 -PVKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRPDESTMVTVVSACAQSGSIEL 288


HSP 3 Score: 81.3 bits (199), Expect = 4.2e-14
Identity = 81/335 (24.18%), Postives = 141/335 (42.09%), Query Frame = 1

Query: 47  LKSCAAL-SLPILGEQFHGQIIKVGCEFEPFVQTGLISMYCRGTLVEN---ARKVFDENS 106
           L +C  L SL I+    H Q+IK+G     +  + LI         E    A  VF    
Sbjct: 40  LHNCKTLQSLRII----HAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 99

Query: 107 QSRKLSVCYNALISGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELG 166
           +   L   +N +  G+  +S    A+ L+  M   G+  NS T   ++  C      + G
Sbjct: 100 EPNLL--IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 159

Query: 167 SSLHGSTLKYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQN 226
             +HG  LK G D D+ V    I+MY++ G ++ A K+FD+ P + ++S+ A++ GYA  
Sbjct: 160 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 219

Query: 227 GMATNVLELYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLN 286
           G   N  +L+  + +     D V+   ++S  A  G      E+   +  +    +    
Sbjct: 220 GYIENAQKLFDEIPV----KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 279

Query: 287 NALINMYARCGNLTKAQAVF----DEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIR 346
             +++  A+ G++   + V     D      L    A+I  Y   G  E A  LFE +  
Sbjct: 280 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 339

Query: 347 SGIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMTR 374
             ++    ++ +++   +H  L  + L  F+ M R
Sbjct: 340 KDVI----SWNTLIGGYTHMNLYKEALLLFQEMLR 360

BLAST of ClCG04G010100 vs. Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 1.8e-134
Identity = 255/612 (41.67%), Postives = 368/612 (60.13%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYPQLLRHG-GRPNAFTFPFALKSCAALSLPILGEQFHGQI 67
           WNT +    K   +++++ ++  L+     R +  T    L + A L    LG Q H   
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247

Query: 68  IKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKCSD 127
            K GC    +V TG IS+Y +   ++    +F E  +     V YNA+I GY SN +   
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD--IVAYNAMIHGYTSNGETEL 307

Query: 128 AVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCFIT 187
           ++ LF+++   G  + S TL+ L+PV     +L L  ++HG  LK    S  SV     T
Sbjct: 308 SLSLFKELMLSGARLRSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTT 367

Query: 188 MYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDPVT 247
           +Y K   ++ A+KLFDE P K L SWNAM+SGY QNG+  + + L+R M      P+PVT
Sbjct: 368 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 427

Query: 248 HVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDEMP 307
              +LS+CA LGA S+G  V   ++++ F ++ +++ ALI MYA+CG++ +A+ +FD M 
Sbjct: 428 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 487

Query: 308 ERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQGLE 367
           ++  V+W  +I GYG+HG G+ A+ +F EM+ SGI P    F+ VL ACSHAGL  +G E
Sbjct: 488 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDE 547

Query: 368 YFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIH 427
            F  M  +Y  +P  +HY+C+VD+LGRAG L  A   IE+M I+P  +VW  LLGAC+IH
Sbjct: 548 IFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 607

Query: 428 KNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGCSY 487
           K+  LA    E + EL+P N+GY+VLLSNI+   +N      +R   K+RKL K PG + 
Sbjct: 608 KDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 667

Query: 488 VELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFG-EPKKD----DRDESNKDLLTG 547
           +E+    H F  GD++HPQ +EIY  LE+LE  +++ G +P+ +    D +E  ++L+  
Sbjct: 668 IEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELM-- 727

Query: 548 VGVHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHH 607
           V VHSE+LA+AFGL+ T  GTE+ IIKNLR+C DCH   K++SKI  R + VRD  RFHH
Sbjct: 728 VKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHH 787

Query: 608 FKNGSCSCKDYW 614
           FK+G CSC DYW
Sbjct: 788 FKDGVCSCGDYW 792


HSP 2 Score: 188.7 bits (478), Expect = 1.9e-46
Identity = 114/391 (29.16%), Postives = 192/391 (49.10%), Query Frame = 1

Query: 37  RPNAFTFPFALKSCAALSLPILGEQFHGQIIKVGCEFEPFVQTGLISMYCRGTLVENARK 96
           +PN+ T+ FA+ + +       G   HGQ +  GC+ E  + + ++ MY +   VE+ARK
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARK 175

Query: 97  VFDENSQSRKLSVCYNALISGYVSNSKCSDAVLLFRQM-NEEGVPVNSVTLLGLIPVCVS 156
           VFD   +  K ++ +N +ISGY  N    +++ +FR + NE    +++ TLL ++P    
Sbjct: 176 VFDRMPE--KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAE 235

Query: 157 PINLELGSSLHGSTLKYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAM 216
              L LG  +H    K G  S   V+  FI++Y KCG +     LF E     ++++NAM
Sbjct: 236 LQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAM 295

Query: 217 VSGYAQNGMATNVLELYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGF 276
           + GY  NG     L L++ + + G R    T V ++    +L      H   LK   S F
Sbjct: 296 IHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLK---SNF 355

Query: 277 NNNPFLNNALINMYARCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEE 336
            ++  ++ AL  +Y++   +  A+ +FDE PE++L SW A+I GY  +G  E A+ LF E
Sbjct: 356 LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 415

Query: 337 MIRSGIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAG 396
           M +S   P+      +LSAC+  G    G ++   + R    +      + ++ +  + G
Sbjct: 416 MQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCG 475

Query: 397 RLNEARNLIESMPIKPDGAVWGALLGACKIH 427
            + EAR L + M  K +   W  ++    +H
Sbjct: 476 SIAEARRLFDLM-TKKNEVTWNTMISGYGLH 499


HSP 3 Score: 70.1 bits (170), Expect = 9.6e-11
Identity = 51/277 (18.41%), Postives = 117/277 (42.24%), Query Frame = 1

Query: 166 HGSTLKYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMA 225
           H   + +G  +D+S++          G++ YA+ +F  +    +  +N ++ G++ N   
Sbjct: 40  HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99

Query: 226 TNVLELYRNMDMH-GVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNA 285
            + L ++ ++     ++P+  T+   +S+ +       G  +  +    G ++   L + 
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159

Query: 286 LINMYARCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVP- 345
           ++ MY +   +  A+ VFD MPE+  + W  +I GY  +     ++Q+F ++I       
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219

Query: 346 DGTAFVSVLSACSHAGLTDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNL 405
           D T  + +L A +       G++   + T K          +  + L  + G++     L
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLAT-KTGCYSHDYVLTGFISLYSKCGKIKMGSAL 279

Query: 406 IESMPIKPDGAVWGALLGACKIHKNVELAELAFEHVI 441
                 KPD   + A++     +   EL+   F+ ++
Sbjct: 280 FREFR-KPDIVAYNAMIHGYTSNGETELSLSLFKELM 314

BLAST of ClCG04G010100 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 6.9e-134
Identity = 249/611 (40.75%), Postives = 369/611 (60.39%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHGQII 67
           WNT +   ++      AL +   +     +P+  T    L + +AL L  +G++ HG  +
Sbjct: 204 WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263

Query: 68  KVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKCSDA 127
           + G +    + T L+ MY +   +E AR++FD   +   +S  +N++I  YV N    +A
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS--WNSMIDAYVQNENPKEA 323

Query: 128 VLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCFITM 187
           +L+F++M +EGV    V+++G +  C    +LE G  +H  +++ GLD +VSVVN  I+M
Sbjct: 324 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 383

Query: 188 YMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDPVTH 247
           Y KC  VD A  +F ++  + L+SWNAM+ G+AQNG   + L  +  M    V+PD  T+
Sbjct: 384 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 443

Query: 248 VGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDEMPE 307
           V V+++ A L        +   +  S  + N F+  AL++MYA+CG +  A+ +FD M E
Sbjct: 444 VSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 503

Query: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQGLEY 367
           R + +W A+I GYG HG G+ A++LFEEM +  I P+G  F+SV+SACSH+GL + GL+ 
Sbjct: 504 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC 563

Query: 368 FKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIHK 427
           F MM   Y ++   +HY  +VDLLGRAGRLNEA + I  MP+KP   V+GA+LGAC+IHK
Sbjct: 564 FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK 623

Query: 428 NVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGCSYV 487
           NV  AE A E + EL P + GY+VLL+NIY  A   + V ++R  M ++ L+K PGCS V
Sbjct: 624 NVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 683

Query: 488 ELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDD-----RDESNKDLLTGV 547
           E+K  VH F  G   HP +++IY  LE+L   +++ G     +      ++  + LL+  
Sbjct: 684 EIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLS-- 743

Query: 548 GVHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHF 607
             HSEKLA++FGLLNT AGT + + KNLR+C DCH   K +S +  R++ VRD  RFHHF
Sbjct: 744 -THSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHF 803

Query: 608 KNGSCSCKDYW 614
           KNG+CSC DYW
Sbjct: 804 KNGACSCGDYW 809


HSP 2 Score: 211.8 bits (538), Expect = 2.0e-53
Identity = 136/494 (27.53%), Postives = 246/494 (49.80%), Query Frame = 1

Query: 4   LSTPWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFH 63
           L+  ++T L+  AK     +AL  + ++      P  + F + LK C   +   +G++ H
Sbjct: 99  LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158

Query: 64  GQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSK 123
           G ++K G   + F  TGL +MY +   V  ARKVFD   +   +S  +N +++GY  N  
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVS--WNTIVAGYSQNGM 218

Query: 124 CSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNC 183
              A+ + + M EE +  + +T++ ++P   +   + +G  +HG  ++ G DS V++   
Sbjct: 219 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 278

Query: 184 FITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPD 243
            + MY KCGS++ A++LFD M  + ++SWN+M+  Y QN      + +++ M   GV+P 
Sbjct: 279 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 338

Query: 244 PVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFD 303
            V+ +G L +CA+LG    G  +       G + N  + N+LI+MY +C  +  A ++F 
Sbjct: 339 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 398

Query: 304 EMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQ 363
           ++  RTLVSW A+I G+  +G    A+  F +M    + PD   +VSV++A +   +T  
Sbjct: 399 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 458

Query: 364 GLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGAC 423
             ++   +  +  L       + +VD+  + G +  AR LI  M  +     W A++   
Sbjct: 459 A-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDGY 518

Query: 424 KIHKNVELAELAFEHVIE--LEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQR---KL 483
             H   + A   FE + +  ++P  + +  ++S   +      G L+  +MMK+    +L
Sbjct: 519 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG-LKCFYMMKENYSIEL 578

Query: 484 KKDPGCSYVELKGR 493
             D   + V+L GR
Sbjct: 579 SMDHYGAMVDLLGR 587


HSP 3 Score: 188.7 bits (478), Expect = 1.9e-46
Identity = 110/326 (33.74%), Postives = 174/326 (53.37%), Query Frame = 1

Query: 39  NAFTFPFALKSCAALSLPILGEQFHGQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVF 98
           N +  P AL      SL  L  Q    + K G   E F QT L+S++CR   V+ A +VF
Sbjct: 34  NVYEHPAALLLERCSSLKEL-RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVF 93

Query: 99  DENSQSRKLSVCYNALISGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPIN 158
           +      KL+V Y+ ++ G+   S    A+  F +M  + V         L+ VC     
Sbjct: 94  EPIDS--KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAE 153

Query: 159 LELGSSLHGSTLKYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSG 218
           L +G  +HG  +K G   D+  +     MY KC  V+ A+K+FD MP + L+SWN +V+G
Sbjct: 154 LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAG 213

Query: 219 YAQNGMATNVLELYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNN 278
           Y+QNGMA   LE+ ++M    ++P  +T V VL + + L   SVG E+      SGF++ 
Sbjct: 214 YSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL 273

Query: 279 PFLNNALINMYARCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIR 338
             ++ AL++MYA+CG+L  A+ +FD M ER +VSW ++I  Y  + + + A+ +F++M+ 
Sbjct: 274 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 333

Query: 339 SGIVPDGTAFVSVLSACSHAGLTDQG 365
            G+ P   + +  L AC+  G  ++G
Sbjct: 334 EGVKPTDVSVMGALHACADLGDLERG 356


HSP 4 Score: 118.2 bits (295), Expect = 3.1e-25
Identity = 76/275 (27.64%), Postives = 131/275 (47.64%), Query Frame = 1

Query: 171 KYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLE 230
           K GL  +       ++++ + GSVD A ++F+ +  K  + ++ M+ G+A+       L+
Sbjct: 62  KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQ 121

Query: 231 LYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYA 290
            +  M    V P       +L  C +     VG E+   +  SGF+ + F    L NMYA
Sbjct: 122 FFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA 181

Query: 291 RCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVS 350
           +C  + +A+ VFD MPER LVSW  I+ GY  +G   +A+++ + M    + P     VS
Sbjct: 182 KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241

Query: 351 VLSACSHAGLTDQGLEYFKMMTRKYQLQPGPEHY----SCIVDLLGRAGRLNEARNLIES 410
           VL A S   L   G E        Y ++ G +      + +VD+  + G L  AR L + 
Sbjct: 242 VLPAVSALRLISVGKE-----IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDG 301

Query: 411 MPIKPDGAVWGALLGACKIHKNVELAELAFEHVIE 442
           M ++ +   W +++ A   ++N + A L F+ +++
Sbjct: 302 M-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330

BLAST of ClCG04G010100 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 9.9e-133
Identity = 235/610 (38.52%), Postives = 377/610 (61.80%), Query Frame = 1

Query: 7   PWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHGQI 66
           PWN  +R  ++   F  AL +Y  +      P++FTFP  LK+C+ LS   +G   H Q+
Sbjct: 86  PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145

Query: 67  IKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKCSD 126
            ++G + + FVQ GLI++Y +   + +AR VF+      +  V + A++S Y  N +  +
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205

Query: 127 AVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCFIT 186
           A+ +F QM +  V  + V L+ ++       +L+ G S+H S +K GL+ +  ++    T
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265

Query: 187 MYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDPVT 246
           MY KCG V  A+ LFD+M    LI WNAM+SGYA+NG A   ++++  M    VRPD ++
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 247 HVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDEMP 306
               +S+CA +G+      +   +  S + ++ F+++ALI+M+A+CG++  A+ VFD   
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQGLE 366
           +R +V W+A+I GYG+HG    A+ L+  M R G+ P+   F+ +L AC+H+G+  +G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 367 YFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIH 426
           +F  M   +++ P  +HY+C++DLLGRAG L++A  +I+ MP++P   VWGALL ACK H
Sbjct: 446 FFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 505

Query: 427 KNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGCSY 486
           ++VEL E A + +  ++P+N G+YV LSN+Y  A+    V  +R  MK++ L KD GCS+
Sbjct: 506 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 565

Query: 487 VELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDD---RDESNKDLLTGVG 546
           VE++GR+  F VGD++HP+ EEI R +E +E+ +++ G     D    D ++++    + 
Sbjct: 566 VEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLC 625

Query: 547 VHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFK 606
            HSE++A+A+GL++T  GT + I KNLR C +CH   K++SK+V R++ VRD  RFHHFK
Sbjct: 626 SHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFK 685

Query: 607 NGSCSCKDYW 614
           +G CSC DYW
Sbjct: 686 DGVCSCGDYW 694


HSP 2 Score: 188.3 bits (477), Expect = 2.4e-46
Identity = 111/369 (30.08%), Postives = 185/369 (50.14%), Query Frame = 1

Query: 60  EQFHGQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYV 119
           +Q H +++ +G +F  F+ T LI        +  AR+VFD+  + +     +NA+I GY 
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP--WNAIIRGYS 97

Query: 120 SNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVS 179
            N+   DA+L++  M    V  +S T   L+  C    +L++G  +H    + G D+DV 
Sbjct: 98  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 157

Query: 180 VVNCFITMYMKCGSVDYAQKLFDEMPV--KGLISWNAMVSGYAQNGMATNVLELYRNMDM 239
           V N  I +Y KC  +  A+ +F+ +P+  + ++SW A+VS YAQNG     LE++  M  
Sbjct: 158 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 217

Query: 240 HGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTK 299
             V+PD V  V VL++   L     G  +   +   G    P L  +L  MYA+CG +  
Sbjct: 218 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 277

Query: 300 AQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSH 359
           A+ +FD+M    L+ W A+I GY  +G+   A+ +F EMI   + PD  +  S +SAC+ 
Sbjct: 278 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 337

Query: 360 AGLTDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWG 419
            G  +Q    ++ + R    +      S ++D+  + G +  AR L+    +  D  VW 
Sbjct: 338 VGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSVEGAR-LVFDRTLDRDVVVWS 397

Query: 420 ALLGACKIH 427
           A++    +H
Sbjct: 398 AMIVGYGLH 402

BLAST of ClCG04G010100 vs. TrEMBL
Match: A0A0A0KFC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452690 PE=4 SV=1)

HSP 1 Score: 1123.6 bits (2905), Expect = 0.0e+00
Identity = 551/614 (89.74%), Postives = 580/614 (94.46%), Query Frame = 1

Query: 1   MNALSTPWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGE 60
           MNALSTPWNTQLRELAKRCQFLQALSLYPQ+LRHG RPNAFTFPFALKSCAALSLPILG 
Sbjct: 10  MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGS 69

Query: 61  QFHGQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVS 120
           QFHGQI KVGC FEPFVQTGLISMYC+G+LV+NARKVF+EN  SRKL+VCYNAL+SGYVS
Sbjct: 70  QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 129

Query: 121 NSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSV 180
           NSKCS+AVLLFRQMNEEGVPVNSVTLLGLIP CVSPINLELGSSLH STLKYG DSDVSV
Sbjct: 130 NSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189

Query: 181 VNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGV 240
           VNCFITMYMKCGSV+YAQKLFDEMPVKGLISWNAMVSGYAQNG+ATNVLELYRNMDM+GV
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 241 RPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQA 300
            PDPVT VGVLSSCANLGAQSVGHEVE KIQASGF +NPFLNNALINMYARCGNLTKAQA
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQA 309

Query: 301 VFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGL 360
           VFD MPERTLVSWTAIIGGYGMHGHGEIAVQLF+EMIRSGI PDGTAFV VLSACSHAGL
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369

Query: 361 TDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           TDQGLEYFKMM R YQL+PGPEHYSC+VDLLGRAGRL EA+ LIESMPIKPDGAVWGALL
Sbjct: 370 TDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL 429

Query: 421 GACKIHKNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKK 480
           GACKIHKNVELAELAFE VIELEP NIGYYVLLSNIY +A NSKGVLRIR MMK++KLKK
Sbjct: 430 GACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKK 489

Query: 481 DPGCSYVELKGRVHPFIVGDRNHPQAEEIYRVLEELEALV-QKFGEPKKDDRDESNKDLL 540
           DPGCSYVELKGRVHPFIVGDRNH Q++EIYRVLEELEA++ Q+FG+P+KD+R+ESNKD  
Sbjct: 490 DPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREESNKDGF 549

Query: 541 TGVGVHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRF 600
           T VGVHSEKLAVAFGLLNT  G EVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRD TRF
Sbjct: 550 TRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRF 609

Query: 601 HHFKNGSCSCKDYW 614
           HHF+NGSCSCKDYW
Sbjct: 610 HHFRNGSCSCKDYW 623

BLAST of ClCG04G010100 vs. TrEMBL
Match: F6HKM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g03150 PE=4 SV=1)

HSP 1 Score: 880.2 bits (2273), Expect = 1.5e-252
Identity = 415/606 (68.48%), Postives = 503/606 (83.00%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHGQII 67
           WN +LRELA++  F +AL+LY Q+L  G  PNAFTFPFA KSCA+LSLP+ G Q HG +I
Sbjct: 24  WNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVI 83

Query: 68  KVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKCSDA 127
           K GCE EPFVQT LISMYC+ + + +ARKVFDEN  SR L+VCYNALI+GY  NS+ SDA
Sbjct: 84  KTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDA 143

Query: 128 VLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCFITM 187
           VLLFRQM +EGV VN+VT+LGLIPVC  PI+L  G+SLH  ++++GLD D+SV NC +TM
Sbjct: 144 VLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTM 203

Query: 188 YMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDPVTH 247
           Y++CGSVD+A+KLFD MP KGLI+WNAM+SGYAQNG+A +VL+LYR M+  G+ PDPVT 
Sbjct: 204 YVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTL 263

Query: 248 VGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDEMPE 307
           VGVLSSCA+LGA + G EVE +I+ SGF  NPFL NALINMYARCGNL KA+A+FD M E
Sbjct: 264 VGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTE 323

Query: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQGLEY 367
           + ++SWTAII GYGMHG GE+AVQLF+EMI S  +PDG AFVSVLSACSHAGLT++GL Y
Sbjct: 324 KNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYY 383

Query: 368 FKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIHK 427
           F  M R Y LQPGPEHYSC+VDLLGRAGRL EAR LI SM ++PDGAVWGALLGACKIH+
Sbjct: 384 FTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHR 443

Query: 428 NVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGCSYV 487
           NVELAELAFE VIE EP NIGYYVLLSNI+ +A N +G+LR+R MM++RKLKK+PGCSYV
Sbjct: 444 NVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYV 503

Query: 488 ELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDDRDESNKDLLTGVGVHSE 547
           E +GR+H F+ GDR HPQA+EIY +L+ LE ++++ G    +D++  N++L+TG+GVHSE
Sbjct: 504 EYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDNDQESRNEELITGMGVHSE 563

Query: 548 KLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFKNGSC 607
           KLA+AFGL+NT  GTE+ +IKNLR+C DCHLF K+VS+IV RQL VRD TRFHHFKNG C
Sbjct: 564 KLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGVC 623

Query: 608 SCKDYW 614
           SCKDYW
Sbjct: 624 SCKDYW 629

BLAST of ClCG04G010100 vs. TrEMBL
Match: V4SWJ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011274mg PE=4 SV=1)

HSP 1 Score: 865.9 bits (2236), Expect = 2.9e-248
Identity = 422/611 (69.07%), Postives = 504/611 (82.49%), Query Frame = 1

Query: 3   ALSTPWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQF 62
           A ++PWNT+LRELA +  F +ALSLY Q+L +G  PNAFTFPFALKSC AL LP  G Q 
Sbjct: 27  AATSPWNTRLRELANQSLFTEALSLYRQMLCYGATPNAFTFPFALKSCTALWLPFAGSQL 86

Query: 63  HGQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNS 122
           H  +IK GCE EPFV T L+S+YC+  LV+NARKVFDE+ +S  L+VCYNALISGYV NS
Sbjct: 87  HCHVIKSGCELEPFVLTSLVSLYCKCRLVDNARKVFDESIKSTHLTVCYNALISGYVLNS 146

Query: 123 KCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVN 182
             S+AV LF +M E+GV +NSVT+L L+P+CV P  L LG   H   +K+GLD D SV N
Sbjct: 147 LVSEAVSLFGKMREQGVEINSVTMLCLLPICVDPGYLWLGMCCHCICVKFGLDLDFSVGN 206

Query: 183 CFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRP 242
           C +TMY+KCGSVDY +KLFD++P KGLI+WNAM+SGYAQNG+AT+VLELYR M   GV P
Sbjct: 207 CLMTMYVKCGSVDYGRKLFDQVPEKGLITWNAMISGYAQNGLATDVLELYREMKSLGVCP 266

Query: 243 DPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVF 302
           D VT VGVLSSCA+LGA SVG EVE +IQA+GF +NPFLNNALINMYARCGNL KA+A+F
Sbjct: 267 DAVTFVGVLSSCAHLGAHSVGLEVEQQIQANGFGSNPFLNNALINMYARCGNLKKARAIF 326

Query: 303 DEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTD 362
           D MP +T+VSWTAIIGGYG+HGHGE+AVQLF+EM++SGI PDGTAFVSVLSACSHAGLTD
Sbjct: 327 DGMPRKTVVSWTAIIGGYGIHGHGEVAVQLFDEMLKSGIRPDGTAFVSVLSACSHAGLTD 386

Query: 363 QGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGA 422
           +GLEYF  M  KY LQPGPEHY+C+VDLLGRAG+LNEA  LIESM ++PDGAVWGALLGA
Sbjct: 387 KGLEYFYAMKNKYGLQPGPEHYTCMVDLLGRAGQLNEALELIESMLVEPDGAVWGALLGA 446

Query: 423 CKIHKNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDP 482
           CKIHKNVELAELAF  VI+LEP N GYYVLLSNIY +A+N  G++R+R MM++R+LKKDP
Sbjct: 447 CKIHKNVELAELAFGKVIKLEPMNTGYYVLLSNIYSEARNLDGIMRVRMMMRERRLKKDP 506

Query: 483 GCSYVELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDDRDESNKDLLTGV 542
           G SYVELKGRVH F+VG+RNH Q  EIYR+L++LE LVQ+    K+ D+ +++++ L   
Sbjct: 507 GYSYVELKGRVHLFMVGERNHHQTVEIYRMLDKLENLVQEHDGTKRSDQ-KNSEEHLNDT 566

Query: 543 GVHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHF 602
            VHSEKLA+AFG++NT  GTE+V++KNLRIC DCHLF K+VSKIV RQ  VRD TRFHHF
Sbjct: 567 EVHSEKLAIAFGIINTSPGTEIVVMKNLRICGDCHLFIKLVSKIVDRQFIVRDATRFHHF 626

Query: 603 KNGSCSCKDYW 614
           K+G CSCKDYW
Sbjct: 627 KSGFCSCKDYW 636

BLAST of ClCG04G010100 vs. TrEMBL
Match: W9R4V5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019144 PE=4 SV=1)

HSP 1 Score: 861.3 bits (2224), Expect = 7.1e-247
Identity = 409/614 (66.61%), Postives = 493/614 (80.29%), Query Frame = 1

Query: 1   MNALSTPWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGE 60
           +   + PWNT LRELAK+C F +AL+LY ++LR G  PNAFTFPF LKSCA+LSL   G+
Sbjct: 23  LTTTAIPWNTHLRELAKQCLFSEALNLYRRMLRSGQSPNAFTFPFVLKSCASLSLSTAGK 82

Query: 61  QFHGQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVS 120
             HG +IK+GCE EPFVQT LISMYC+  LV+NARKVFDEN QSR L+VCYNALISGY  
Sbjct: 83  LLHGHVIKIGCEPEPFVQTSLISMYCKCCLVDNARKVFDENPQSRNLTVCYNALISGYTL 142

Query: 121 NSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSV 180
           NSK  D ++LF +M E GV VNSVT+LGLIP C  P+ L LG   HG  +K GLD D S+
Sbjct: 143 NSKFLDGIVLFSKMRETGVAVNSVTMLGLIPRCAEPVYLALGMCFHGFCVKSGLDIDFSI 202

Query: 181 VNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGV 240
            NC +TMY+KCGSV YA+ LFD MP KGLI+WNAM+SGYAQNG AT VL+LYR M + G+
Sbjct: 203 GNCLLTMYVKCGSVQYARSLFDAMPEKGLITWNAMISGYAQNGFATEVLDLYREMKLCGI 262

Query: 241 RPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQA 300
             DPVT VGVLSSC +LGA  VG EVE ++Q  GF++NPFL N+LINMYARCGNL KA+ 
Sbjct: 263 YLDPVTLVGVLSSCTHLGAHGVGREVEQQVQLCGFDSNPFLKNSLINMYARCGNLVKARE 322

Query: 301 VFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGL 360
           +FD + E+++VSWT +IGGYG+HGHGEIAVQLFEEMI++GI PD TAFVS++SACSH+G+
Sbjct: 323 IFDSVLEKSIVSWTGVIGGYGVHGHGEIAVQLFEEMIKTGIRPDKTAFVSIISACSHSGM 382

Query: 361 TDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           TD+GLEYF  M  KY LQPGPEHYSC+VDLLGRAGRL EA++LI SM + PDGAVWGALL
Sbjct: 383 TDKGLEYFSAMKSKYGLQPGPEHYSCVVDLLGRAGRLKEAKDLINSMQVNPDGAVWGALL 442

Query: 421 GACKIHKNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKK 480
            ACKIHKNVELAELAFE +IELEP NIGYYVLLSNIY DA+N +GVL++R M+++R+LKK
Sbjct: 443 NACKIHKNVELAELAFERIIELEPTNIGYYVLLSNIYSDAENLEGVLKVRVMLRERQLKK 502

Query: 481 DPGCSYVELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPK-KDDRDESNKDLL 540
           +PGCSYVELKG+VH F+ GD+ H Q  +IY +L+ELE  V++ G P  +D +    ++ L
Sbjct: 503 EPGCSYVELKGKVHMFLAGDKTHSQTADIYGMLDELENSVKQLGGPNGEDHKRRKGEEQL 562

Query: 541 TGVGVHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRF 600
            G GVHSEKLA+AFGL+NT  GTE+V+IKNLR C DCHLF K+VSKIV R+  VRD TRF
Sbjct: 563 IGEGVHSEKLAIAFGLVNTSPGTEIVVIKNLRACGDCHLFIKLVSKIVDRKFVVRDATRF 622

Query: 601 HHFKNGSCSCKDYW 614
           HHFK+G CSC+DYW
Sbjct: 623 HHFKDGVCSCRDYW 636

BLAST of ClCG04G010100 vs. TrEMBL
Match: A0A0D2RWW9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G154800 PE=4 SV=1)

HSP 1 Score: 858.2 bits (2216), Expect = 6.0e-246
Identity = 417/606 (68.81%), Postives = 499/606 (82.34%), Query Frame = 1

Query: 7   PWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHGQI 66
           PWNTQLRELAK+CQ+L+AL+LY Q+LR G  PNAF+FPFALKS A+L LP+ G+Q H Q+
Sbjct: 5   PWNTQLRELAKQCQYLEALTLYRQMLRCGSSPNAFSFPFALKSSASLPLPLSGQQLHCQV 64

Query: 67  IKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKCSD 126
           IK GC  EPFV T LISMYC+ + + NARKVFDEN  S +L+VCYNALISGY  NS+  D
Sbjct: 65  IKSGCSQEPFVLTSLISMYCKFSSLGNARKVFDENPISNQLTVCYNALISGYALNSRVFD 124

Query: 127 AVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCFIT 186
            + LF +M E GV VNSVT+LGL+PV   P  + +G   H   +K GL+ D SV NC +T
Sbjct: 125 VIALFCRMREMGVSVNSVTMLGLVPVFSEPGYISVGMCFHCCCVKLGLNLDFSVANCLVT 184

Query: 187 MYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDPVT 246
           MY+KCG++++ + LFDEMP KGLI+WNAM+SGYAQNG+A +VLELYR M+  GV PD VT
Sbjct: 185 MYVKCGAIEFGRNLFDEMPKKGLITWNAMISGYAQNGLAADVLELYRKMETAGVCPDAVT 244

Query: 247 HVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDEMP 306
            VGVLSSCANLGA SVGHEVE +I++S    NPFLNNALINMYARCGNL KA+A+FD MP
Sbjct: 245 FVGVLSSCANLGAVSVGHEVEQRIESSRLGLNPFLNNALINMYARCGNLVKARAIFDGMP 304

Query: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQGLE 366
            +++VSWTAIIGGYGMHG+GEIAV+LF+EMI+SGI PDG AFVSVL ACSHAGLT++GLE
Sbjct: 305 VKSVVSWTAIIGGYGMHGYGEIAVELFDEMIKSGIRPDGAAFVSVLCACSHAGLTEKGLE 364

Query: 367 YFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIH 426
            F  M  K++LQPGPEHYSC+VDLLGRAGRLNEA  LI+SM +KPDGAVWGALLGACKIH
Sbjct: 365 CFSEMKMKHRLQPGPEHYSCVVDLLGRAGRLNEALELIKSMQVKPDGAVWGALLGACKIH 424

Query: 427 KNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGCSY 486
           +NVE+AELAFE VIE EP NIGYYVLLSNIY +A+N +GVL++R MM++RKLKKDPG SY
Sbjct: 425 RNVEMAELAFEGVIEFEPTNIGYYVLLSNIYSEAENLEGVLKVRVMMRERKLKKDPGFSY 484

Query: 487 VELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDDRDESNKDLLTGVGVHS 546
           VE KGRVH F+ GDR+HPQ +EIYR+++ELEALV+K     KD+ +  N + L G+GVHS
Sbjct: 485 VEYKGRVHLFLAGDRSHPQKKEIYRMVDELEALVKKLA-GCKDNEERRNIEALLGMGVHS 544

Query: 547 EKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFKNGS 606
           EKLA+ FGLLN+  GTE+V+IKNLR+CEDCHLFFK VSKIV RQL VRD TRFHHF++G 
Sbjct: 545 EKLAIVFGLLNSEPGTEIVVIKNLRMCEDCHLFFKGVSKIVTRQLVVRDATRFHHFRDGH 604

Query: 607 CSCKDY 613
           CSCKDY
Sbjct: 605 CSCKDY 609

BLAST of ClCG04G010100 vs. TAIR10
Match: AT3G11460.1 (AT3G11460.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 806.2 bits (2081), Expect = 1.4e-233
Identity = 388/609 (63.71%), Postives = 483/609 (79.31%), Query Frame = 1

Query: 5   STPWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHG 64
           STPWN +LRELA +  F +++SLY  +LR G  P+AF+FPF LKSCA+LSLP+ G+Q H 
Sbjct: 18  STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77

Query: 65  QIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKC 124
            + K GCE EPFV T LISMYC+  LV +ARKVF+EN QS +LSVCYNALISGY +NSK 
Sbjct: 78  HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137

Query: 125 SDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCF 184
           +DA  +FR+M E GV V+SVT+LGL+P+C  P  L LG SLHG  +K GLDS+V+V+N F
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197

Query: 185 ITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDP 244
           ITMYMKCGSV+  ++LFDEMPVKGLI+WNA++SGY+QNG+A +VLELY  M   GV PDP
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257

Query: 245 VTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDE 304
            T V VLSSCA+LGA+ +GHEV   ++++GF  N F++NA I+MYARCGNL KA+AVFD 
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317

Query: 305 MPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQG 364
           MP ++LVSWTA+IG YGMHG GEI + LF++MI+ GI PDG  FV VLSACSH+GLTD+G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377

Query: 365 LEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACK 424
           LE F+ M R+Y+L+PGPEHYSC+VDLLGRAGRL+EA   IESMP++PDGAVWGALLGACK
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437

Query: 425 IHKNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGC 484
           IHKNV++AELAF  VIE EP NIGYYVL+SNIY D+KN +G+ RIR MM++R  +K PG 
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497

Query: 485 SYVELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDDRDESNKDLLTGVGV 544
           SYVE KGRVH F+ GDR+H Q EE++R+L+ELE  V +       DR E   ++ +    
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGE---EVSSTTRE 557

Query: 545 HSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFKN 604
           HSE+LA+AFG+LN++ GTE+++IKNLR+CEDCH+F K VSKIV RQ  VRD +RFH+FK+
Sbjct: 558 HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKD 617

Query: 605 GSCSCKDYW 614
           G CSCKDYW
Sbjct: 618 GVCSCKDYW 623

BLAST of ClCG04G010100 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 492.3 bits (1266), Expect = 4.4e-139
Identity = 257/643 (39.97%), Postives = 375/643 (58.32%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHGQII 67
           WNT  R  A     + AL LY  ++  G  PN++TFPF LKSCA       G+Q HG ++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 68  KVGCEFEPFVQTGLISMYCRGTLVENARKVFD-----------------------ENSQS 127
           K+GC+ + +V T LISMY +   +E+A KVFD                       EN+Q 
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 128 R------KLSVCYNALISGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPIN 187
                  K  V +NA+ISGY       +A+ LF+ M +  V  +  T++ ++  C    +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281

Query: 188 LELGSSLHGSTLKYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSG 247
           +ELG  +H     +G  S++ +VN  I +Y KCG ++ A  LF+ +P K +ISWN ++ G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341

Query: 248 YAQNGMATNVLELYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKI--QASGFN 307
           Y    +    L L++ M   G  P+ VT + +L +CA+LGA  +G  + + I  +  G  
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401

Query: 308 NNPFLNNALINMYARCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEM 367
           N   L  +LI+MYA+CG++  A  VF+ +  ++L SW A+I G+ MHG  + +  LF  M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461

Query: 368 IRSGIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGR 427
            + GI PD   FV +LSACSH+G+ D G   F+ MT+ Y++ P  EHY C++DLLG +G 
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGL 521

Query: 428 LNEARNLIESMPIKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPANIGYYVLLSNI 487
             EA  +I  M ++PDG +W +LL ACK+H NVEL E   E++I++EP N G YVLLSNI
Sbjct: 522 FKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 581

Query: 488 YYDAKNSKGVLRIRFMMKQRKLKKDPGCSYVELKGRVHPFIVGDRNHPQAEEIYRVLEEL 547
           Y  A     V + R ++  + +KK PGCS +E+   VH FI+GD+ HP+  EIY +LEE+
Sbjct: 582 YASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641

Query: 548 EALVQKFG------EPKKDDRDESNKDLLTGVGVHSEKLAVAFGLLNTMAGTEVVIIKNL 607
           E L++K G      E  ++  +E  +  L     HSEKLA+AFGL++T  GT++ I+KNL
Sbjct: 642 EVLLEKAGFVPDTSEVLQEMEEEWKEGALRH---HSEKLAIAFGLISTKPGTKLTIVKNL 701

Query: 608 RICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFKNGSCSCKDYW 614
           R+C +CH   K++SKI  R++  RD TRFHHF++G CSC DYW
Sbjct: 702 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741


HSP 2 Score: 97.1 bits (240), Expect = 4.1e-20
Identity = 68/244 (27.87%), Postives = 118/244 (48.36%), Query Frame = 1

Query: 165 LHGSTLKYGLDSDVSVVN-----CFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGY 224
           +H   +K GL +    ++     C ++ + +   + YA  +F  +    L+ WN M  G+
Sbjct: 52  IHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPYAISVFKTIQEPNLLIWNTMFRGH 111

Query: 225 AQNGMATNVLELYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNP 284
           A +    + L+LY  M   G+ P+  T   VL SCA   A   G ++   +   G + + 
Sbjct: 112 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 171

Query: 285 FLNNALINMYARCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRS 344
           +++ +LI+MY + G L  A  VFD+ P R +VS+TA+I GY   G+ E A +LF+E+   
Sbjct: 172 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI--- 231

Query: 345 GIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNE 404
             V D  ++ +++S  +  G   + LE FK M  K  ++P       +V    ++G +  
Sbjct: 232 -PVKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRPDESTMVTVVSACAQSGSIEL 288


HSP 3 Score: 81.3 bits (199), Expect = 2.3e-15
Identity = 81/335 (24.18%), Postives = 141/335 (42.09%), Query Frame = 1

Query: 47  LKSCAAL-SLPILGEQFHGQIIKVGCEFEPFVQTGLISMYCRGTLVEN---ARKVFDENS 106
           L +C  L SL I+    H Q+IK+G     +  + LI         E    A  VF    
Sbjct: 40  LHNCKTLQSLRII----HAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 99

Query: 107 QSRKLSVCYNALISGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELG 166
           +   L   +N +  G+  +S    A+ L+  M   G+  NS T   ++  C      + G
Sbjct: 100 EPNLL--IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 159

Query: 167 SSLHGSTLKYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQN 226
             +HG  LK G D D+ V    I+MY++ G ++ A K+FD+ P + ++S+ A++ GYA  
Sbjct: 160 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 219

Query: 227 GMATNVLELYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLN 286
           G   N  +L+  + +     D V+   ++S  A  G      E+   +  +    +    
Sbjct: 220 GYIENAQKLFDEIPV----KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 279

Query: 287 NALINMYARCGNLTKAQAVF----DEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIR 346
             +++  A+ G++   + V     D      L    A+I  Y   G  E A  LFE +  
Sbjct: 280 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 339

Query: 347 SGIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMTR 374
             ++    ++ +++   +H  L  + L  F+ M R
Sbjct: 340 KDVI----SWNTLIGGYTHMNLYKEALLLFQEMLR 360

BLAST of ClCG04G010100 vs. TAIR10
Match: AT4G30700.1 (AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 481.1 bits (1237), Expect = 1.0e-135
Identity = 255/612 (41.67%), Postives = 368/612 (60.13%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYPQLLRHG-GRPNAFTFPFALKSCAALSLPILGEQFHGQI 67
           WNT +    K   +++++ ++  L+     R +  T    L + A L    LG Q H   
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247

Query: 68  IKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKCSD 127
            K GC    +V TG IS+Y +   ++    +F E  +     V YNA+I GY SN +   
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD--IVAYNAMIHGYTSNGETEL 307

Query: 128 AVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCFIT 187
           ++ LF+++   G  + S TL+ L+PV     +L L  ++HG  LK    S  SV     T
Sbjct: 308 SLSLFKELMLSGARLRSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTT 367

Query: 188 MYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDPVT 247
           +Y K   ++ A+KLFDE P K L SWNAM+SGY QNG+  + + L+R M      P+PVT
Sbjct: 368 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 427

Query: 248 HVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDEMP 307
              +LS+CA LGA S+G  V   ++++ F ++ +++ ALI MYA+CG++ +A+ +FD M 
Sbjct: 428 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 487

Query: 308 ERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQGLE 367
           ++  V+W  +I GYG+HG G+ A+ +F EM+ SGI P    F+ VL ACSHAGL  +G E
Sbjct: 488 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDE 547

Query: 368 YFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIH 427
            F  M  +Y  +P  +HY+C+VD+LGRAG L  A   IE+M I+P  +VW  LLGAC+IH
Sbjct: 548 IFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 607

Query: 428 KNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGCSY 487
           K+  LA    E + EL+P N+GY+VLLSNI+   +N      +R   K+RKL K PG + 
Sbjct: 608 KDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 667

Query: 488 VELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFG-EPKKD----DRDESNKDLLTG 547
           +E+    H F  GD++HPQ +EIY  LE+LE  +++ G +P+ +    D +E  ++L+  
Sbjct: 668 IEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELM-- 727

Query: 548 VGVHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHH 607
           V VHSE+LA+AFGL+ T  GTE+ IIKNLR+C DCH   K++SKI  R + VRD  RFHH
Sbjct: 728 VKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHH 787

Query: 608 FKNGSCSCKDYW 614
           FK+G CSC DYW
Sbjct: 788 FKDGVCSCGDYW 792


HSP 2 Score: 188.7 bits (478), Expect = 1.0e-47
Identity = 114/391 (29.16%), Postives = 192/391 (49.10%), Query Frame = 1

Query: 37  RPNAFTFPFALKSCAALSLPILGEQFHGQIIKVGCEFEPFVQTGLISMYCRGTLVENARK 96
           +PN+ T+ FA+ + +       G   HGQ +  GC+ E  + + ++ MY +   VE+ARK
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARK 175

Query: 97  VFDENSQSRKLSVCYNALISGYVSNSKCSDAVLLFRQM-NEEGVPVNSVTLLGLIPVCVS 156
           VFD   +  K ++ +N +ISGY  N    +++ +FR + NE    +++ TLL ++P    
Sbjct: 176 VFDRMPE--KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAE 235

Query: 157 PINLELGSSLHGSTLKYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAM 216
              L LG  +H    K G  S   V+  FI++Y KCG +     LF E     ++++NAM
Sbjct: 236 LQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAM 295

Query: 217 VSGYAQNGMATNVLELYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGF 276
           + GY  NG     L L++ + + G R    T V ++    +L      H   LK   S F
Sbjct: 296 IHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLK---SNF 355

Query: 277 NNNPFLNNALINMYARCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEE 336
            ++  ++ AL  +Y++   +  A+ +FDE PE++L SW A+I GY  +G  E A+ LF E
Sbjct: 356 LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 415

Query: 337 MIRSGIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAG 396
           M +S   P+      +LSAC+  G    G ++   + R    +      + ++ +  + G
Sbjct: 416 MQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCG 475

Query: 397 RLNEARNLIESMPIKPDGAVWGALLGACKIH 427
            + EAR L + M  K +   W  ++    +H
Sbjct: 476 SIAEARRLFDLM-TKKNEVTWNTMISGYGLH 499


HSP 3 Score: 70.1 bits (170), Expect = 5.4e-12
Identity = 51/277 (18.41%), Postives = 117/277 (42.24%), Query Frame = 1

Query: 166 HGSTLKYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMA 225
           H   + +G  +D+S++          G++ YA+ +F  +    +  +N ++ G++ N   
Sbjct: 40  HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99

Query: 226 TNVLELYRNMDMH-GVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNA 285
            + L ++ ++     ++P+  T+   +S+ +       G  +  +    G ++   L + 
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159

Query: 286 LINMYARCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVP- 345
           ++ MY +   +  A+ VFD MPE+  + W  +I GY  +     ++Q+F ++I       
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219

Query: 346 DGTAFVSVLSACSHAGLTDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNL 405
           D T  + +L A +       G++   + T K          +  + L  + G++     L
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLAT-KTGCYSHDYVLTGFISLYSKCGKIKMGSAL 279

Query: 406 IESMPIKPDGAVWGALLGACKIHKNVELAELAFEHVI 441
                 KPD   + A++     +   EL+   F+ ++
Sbjct: 280 FREFR-KPDIVAYNAMIHGYTSNGETELSLSLFKELM 314

BLAST of ClCG04G010100 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 479.2 bits (1232), Expect = 3.9e-135
Identity = 249/611 (40.75%), Postives = 369/611 (60.39%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHGQII 67
           WNT +   ++      AL +   +     +P+  T    L + +AL L  +G++ HG  +
Sbjct: 204 WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263

Query: 68  KVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKCSDA 127
           + G +    + T L+ MY +   +E AR++FD   +   +S  +N++I  YV N    +A
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS--WNSMIDAYVQNENPKEA 323

Query: 128 VLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCFITM 187
           +L+F++M +EGV    V+++G +  C    +LE G  +H  +++ GLD +VSVVN  I+M
Sbjct: 324 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 383

Query: 188 YMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDPVTH 247
           Y KC  VD A  +F ++  + L+SWNAM+ G+AQNG   + L  +  M    V+PD  T+
Sbjct: 384 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 443

Query: 248 VGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDEMPE 307
           V V+++ A L        +   +  S  + N F+  AL++MYA+CG +  A+ +FD M E
Sbjct: 444 VSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 503

Query: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQGLEY 367
           R + +W A+I GYG HG G+ A++LFEEM +  I P+G  F+SV+SACSH+GL + GL+ 
Sbjct: 504 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC 563

Query: 368 FKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIHK 427
           F MM   Y ++   +HY  +VDLLGRAGRLNEA + I  MP+KP   V+GA+LGAC+IHK
Sbjct: 564 FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK 623

Query: 428 NVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGCSYV 487
           NV  AE A E + EL P + GY+VLL+NIY  A   + V ++R  M ++ L+K PGCS V
Sbjct: 624 NVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 683

Query: 488 ELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDD-----RDESNKDLLTGV 547
           E+K  VH F  G   HP +++IY  LE+L   +++ G     +      ++  + LL+  
Sbjct: 684 EIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLS-- 743

Query: 548 GVHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHF 607
             HSEKLA++FGLLNT AGT + + KNLR+C DCH   K +S +  R++ VRD  RFHHF
Sbjct: 744 -THSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHF 803

Query: 608 KNGSCSCKDYW 614
           KNG+CSC DYW
Sbjct: 804 KNGACSCGDYW 809


HSP 2 Score: 211.8 bits (538), Expect = 1.2e-54
Identity = 136/494 (27.53%), Postives = 246/494 (49.80%), Query Frame = 1

Query: 4   LSTPWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFH 63
           L+  ++T L+  AK     +AL  + ++      P  + F + LK C   +   +G++ H
Sbjct: 99  LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158

Query: 64  GQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSK 123
           G ++K G   + F  TGL +MY +   V  ARKVFD   +   +S  +N +++GY  N  
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVS--WNTIVAGYSQNGM 218

Query: 124 CSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNC 183
              A+ + + M EE +  + +T++ ++P   +   + +G  +HG  ++ G DS V++   
Sbjct: 219 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 278

Query: 184 FITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPD 243
            + MY KCGS++ A++LFD M  + ++SWN+M+  Y QN      + +++ M   GV+P 
Sbjct: 279 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 338

Query: 244 PVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFD 303
            V+ +G L +CA+LG    G  +       G + N  + N+LI+MY +C  +  A ++F 
Sbjct: 339 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 398

Query: 304 EMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQ 363
           ++  RTLVSW A+I G+  +G    A+  F +M    + PD   +VSV++A +   +T  
Sbjct: 399 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 458

Query: 364 GLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGAC 423
             ++   +  +  L       + +VD+  + G +  AR LI  M  +     W A++   
Sbjct: 459 A-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDGY 518

Query: 424 KIHKNVELAELAFEHVIE--LEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQR---KL 483
             H   + A   FE + +  ++P  + +  ++S   +      G L+  +MMK+    +L
Sbjct: 519 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG-LKCFYMMKENYSIEL 578

Query: 484 KKDPGCSYVELKGR 493
             D   + V+L GR
Sbjct: 579 SMDHYGAMVDLLGR 587


HSP 3 Score: 188.7 bits (478), Expect = 1.0e-47
Identity = 110/326 (33.74%), Postives = 174/326 (53.37%), Query Frame = 1

Query: 39  NAFTFPFALKSCAALSLPILGEQFHGQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVF 98
           N +  P AL      SL  L  Q    + K G   E F QT L+S++CR   V+ A +VF
Sbjct: 34  NVYEHPAALLLERCSSLKEL-RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVF 93

Query: 99  DENSQSRKLSVCYNALISGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPIN 158
           +      KL+V Y+ ++ G+   S    A+  F +M  + V         L+ VC     
Sbjct: 94  EPIDS--KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAE 153

Query: 159 LELGSSLHGSTLKYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSG 218
           L +G  +HG  +K G   D+  +     MY KC  V+ A+K+FD MP + L+SWN +V+G
Sbjct: 154 LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAG 213

Query: 219 YAQNGMATNVLELYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNN 278
           Y+QNGMA   LE+ ++M    ++P  +T V VL + + L   SVG E+      SGF++ 
Sbjct: 214 YSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL 273

Query: 279 PFLNNALINMYARCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIR 338
             ++ AL++MYA+CG+L  A+ +FD M ER +VSW ++I  Y  + + + A+ +F++M+ 
Sbjct: 274 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 333

Query: 339 SGIVPDGTAFVSVLSACSHAGLTDQG 365
            G+ P   + +  L AC+  G  ++G
Sbjct: 334 EGVKPTDVSVMGALHACADLGDLERG 356


HSP 4 Score: 118.2 bits (295), Expect = 1.7e-26
Identity = 76/275 (27.64%), Postives = 131/275 (47.64%), Query Frame = 1

Query: 171 KYGLDSDVSVVNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLE 230
           K GL  +       ++++ + GSVD A ++F+ +  K  + ++ M+ G+A+       L+
Sbjct: 62  KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQ 121

Query: 231 LYRNMDMHGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYA 290
            +  M    V P       +L  C +     VG E+   +  SGF+ + F    L NMYA
Sbjct: 122 FFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA 181

Query: 291 RCGNLTKAQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVS 350
           +C  + +A+ VFD MPER LVSW  I+ GY  +G   +A+++ + M    + P     VS
Sbjct: 182 KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241

Query: 351 VLSACSHAGLTDQGLEYFKMMTRKYQLQPGPEHY----SCIVDLLGRAGRLNEARNLIES 410
           VL A S   L   G E        Y ++ G +      + +VD+  + G L  AR L + 
Sbjct: 242 VLPAVSALRLISVGKE-----IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDG 301

Query: 411 MPIKPDGAVWGALLGACKIHKNVELAELAFEHVIE 442
           M ++ +   W +++ A   ++N + A L F+ +++
Sbjct: 302 M-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330

BLAST of ClCG04G010100 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 475.3 bits (1222), Expect = 5.6e-134
Identity = 235/610 (38.52%), Postives = 377/610 (61.80%), Query Frame = 1

Query: 7   PWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHGQI 66
           PWN  +R  ++   F  AL +Y  +      P++FTFP  LK+C+ LS   +G   H Q+
Sbjct: 86  PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145

Query: 67  IKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKCSD 126
            ++G + + FVQ GLI++Y +   + +AR VF+      +  V + A++S Y  N +  +
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205

Query: 127 AVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCFIT 186
           A+ +F QM +  V  + V L+ ++       +L+ G S+H S +K GL+ +  ++    T
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265

Query: 187 MYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDPVT 246
           MY KCG V  A+ LFD+M    LI WNAM+SGYA+NG A   ++++  M    VRPD ++
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 247 HVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDEMP 306
               +S+CA +G+      +   +  S + ++ F+++ALI+M+A+CG++  A+ VFD   
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQGLE 366
           +R +V W+A+I GYG+HG    A+ L+  M R G+ P+   F+ +L AC+H+G+  +G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 367 YFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIH 426
           +F  M   +++ P  +HY+C++DLLGRAG L++A  +I+ MP++P   VWGALL ACK H
Sbjct: 446 FFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 505

Query: 427 KNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGCSY 486
           ++VEL E A + +  ++P+N G+YV LSN+Y  A+    V  +R  MK++ L KD GCS+
Sbjct: 506 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 565

Query: 487 VELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDD---RDESNKDLLTGVG 546
           VE++GR+  F VGD++HP+ EEI R +E +E+ +++ G     D    D ++++    + 
Sbjct: 566 VEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLC 625

Query: 547 VHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFK 606
            HSE++A+A+GL++T  GT + I KNLR C +CH   K++SK+V R++ VRD  RFHHFK
Sbjct: 626 SHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFK 685

Query: 607 NGSCSCKDYW 614
           +G CSC DYW
Sbjct: 686 DGVCSCGDYW 694


HSP 2 Score: 188.3 bits (477), Expect = 1.4e-47
Identity = 111/369 (30.08%), Postives = 185/369 (50.14%), Query Frame = 1

Query: 60  EQFHGQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYV 119
           +Q H +++ +G +F  F+ T LI        +  AR+VFD+  + +     +NA+I GY 
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP--WNAIIRGYS 97

Query: 120 SNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVS 179
            N+   DA+L++  M    V  +S T   L+  C    +L++G  +H    + G D+DV 
Sbjct: 98  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 157

Query: 180 VVNCFITMYMKCGSVDYAQKLFDEMPV--KGLISWNAMVSGYAQNGMATNVLELYRNMDM 239
           V N  I +Y KC  +  A+ +F+ +P+  + ++SW A+VS YAQNG     LE++  M  
Sbjct: 158 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 217

Query: 240 HGVRPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTK 299
             V+PD V  V VL++   L     G  +   +   G    P L  +L  MYA+CG +  
Sbjct: 218 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 277

Query: 300 AQAVFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSH 359
           A+ +FD+M    L+ W A+I GY  +G+   A+ +F EMI   + PD  +  S +SAC+ 
Sbjct: 278 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 337

Query: 360 AGLTDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWG 419
            G  +Q    ++ + R    +      S ++D+  + G +  AR L+    +  D  VW 
Sbjct: 338 VGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSVEGAR-LVFDRTLDRDVVVWS 397

Query: 420 ALLGACKIH 427
           A++    +H
Sbjct: 398 AMIVGYGLH 402

BLAST of ClCG04G010100 vs. NCBI nr
Match: gi|659125232|ref|XP_008462579.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Cucumis melo])

HSP 1 Score: 1124.8 bits (2908), Expect = 0.0e+00
Identity = 551/614 (89.74%), Postives = 578/614 (94.14%), Query Frame = 1

Query: 1   MNALSTPWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGE 60
           MNALSTPWNTQLRELAKRCQFLQALSLYPQ+LRHG RPNAFTFPFALKSCAALS PILG 
Sbjct: 10  MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSHPILGG 69

Query: 61  QFHGQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVS 120
           QFHGQIIKVGC FEPFVQTGLISMYC+G+LVENARKVFDEN  SRKL+VCYNALISGY S
Sbjct: 70  QFHGQIIKVGCIFEPFVQTGLISMYCKGSLVENARKVFDENFHSRKLTVCYNALISGYAS 129

Query: 121 NSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSV 180
           NSKCSDAVLLFRQMNEEG+PVNSVTLLGLIP CVSPINLELGSSLH STLKYG DS+VSV
Sbjct: 130 NSKCSDAVLLFRQMNEEGIPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSEVSV 189

Query: 181 VNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGV 240
           VNCFITMYMKCGSV+YAQKLFDEMPVKGLISWNAMVSGYAQNG+ATNVLELYRNMDM+GV
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 241 RPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQA 300
           RPDP+T VGVLSSCANLGAQSVGH VE KIQASGF NNPFLNNALINMYARCGNLTKAQ+
Sbjct: 250 RPDPITLVGVLSSCANLGAQSVGHAVEFKIQASGFTNNPFLNNALINMYARCGNLTKAQS 309

Query: 301 VFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGL 360
           VFD MPERTLVSWTAIIGGYGMHGHGEIAVQLF+EMIRSGI PDGTAFV VLSACSHAGL
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369

Query: 361 TDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           TDQGLEYFKMM R Y+L+PG EHYSC+VDLLGRAGRL EA+NLIESMPIKPDGAVWGALL
Sbjct: 370 TDQGLEYFKMMKRNYRLEPGQEHYSCMVDLLGRAGRLKEAQNLIESMPIKPDGAVWGALL 429

Query: 421 GACKIHKNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKK 480
           GACKIHKNVELAELAFE VIE EP NIGYYVLLSNIY DA NSKGVLRIR MMK++KLKK
Sbjct: 430 GACKIHKNVELAELAFERVIEHEPENIGYYVLLSNIYSDANNSKGVLRIRIMMKEKKLKK 489

Query: 481 DPGCSYVELKGRVHPFIVGDRNHPQAEEIYRVLEELEALV-QKFGEPKKDDRDESNKDLL 540
           DPGCSYVELKGRVHPFIVGDRNHPQ++EIYRVLEELEA++ Q+FG+PKKD+R+ESNKD  
Sbjct: 490 DPGCSYVELKGRVHPFIVGDRNHPQSDEIYRVLEELEAIIMQEFGKPKKDNREESNKDFF 549

Query: 541 TGVGVHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRF 600
           TGVGVHSEKLAVAFGLLNT  G EVVIIKNLRICEDCHLFFKMVSKI  RQLTVRD TRF
Sbjct: 550 TGVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIADRQLTVRDATRF 609

Query: 601 HHFKNGSCSCKDYW 614
           HHF+NGSCSCKDYW
Sbjct: 610 HHFRNGSCSCKDYW 623

BLAST of ClCG04G010100 vs. NCBI nr
Match: gi|449451271|ref|XP_004143385.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Cucumis sativus])

HSP 1 Score: 1123.6 bits (2905), Expect = 0.0e+00
Identity = 551/614 (89.74%), Postives = 580/614 (94.46%), Query Frame = 1

Query: 1   MNALSTPWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGE 60
           MNALSTPWNTQLRELAKRCQFLQALSLYPQ+LRHG RPNAFTFPFALKSCAALSLPILG 
Sbjct: 10  MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGS 69

Query: 61  QFHGQIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVS 120
           QFHGQI KVGC FEPFVQTGLISMYC+G+LV+NARKVF+EN  SRKL+VCYNAL+SGYVS
Sbjct: 70  QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 129

Query: 121 NSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSV 180
           NSKCS+AVLLFRQMNEEGVPVNSVTLLGLIP CVSPINLELGSSLH STLKYG DSDVSV
Sbjct: 130 NSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189

Query: 181 VNCFITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGV 240
           VNCFITMYMKCGSV+YAQKLFDEMPVKGLISWNAMVSGYAQNG+ATNVLELYRNMDM+GV
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 241 RPDPVTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQA 300
            PDPVT VGVLSSCANLGAQSVGHEVE KIQASGF +NPFLNNALINMYARCGNLTKAQA
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQA 309

Query: 301 VFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGL 360
           VFD MPERTLVSWTAIIGGYGMHGHGEIAVQLF+EMIRSGI PDGTAFV VLSACSHAGL
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369

Query: 361 TDQGLEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           TDQGLEYFKMM R YQL+PGPEHYSC+VDLLGRAGRL EA+ LIESMPIKPDGAVWGALL
Sbjct: 370 TDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL 429

Query: 421 GACKIHKNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKK 480
           GACKIHKNVELAELAFE VIELEP NIGYYVLLSNIY +A NSKGVLRIR MMK++KLKK
Sbjct: 430 GACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKK 489

Query: 481 DPGCSYVELKGRVHPFIVGDRNHPQAEEIYRVLEELEALV-QKFGEPKKDDRDESNKDLL 540
           DPGCSYVELKGRVHPFIVGDRNH Q++EIYRVLEELEA++ Q+FG+P+KD+R+ESNKD  
Sbjct: 490 DPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREESNKDGF 549

Query: 541 TGVGVHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRF 600
           T VGVHSEKLAVAFGLLNT  G EVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRD TRF
Sbjct: 550 TRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRF 609

Query: 601 HHFKNGSCSCKDYW 614
           HHF+NGSCSCKDYW
Sbjct: 610 HHFRNGSCSCKDYW 623

BLAST of ClCG04G010100 vs. NCBI nr
Match: gi|645276950|ref|XP_008243533.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Prunus mume])

HSP 1 Score: 890.2 bits (2299), Expect = 2.1e-255
Identity = 424/609 (69.62%), Postives = 504/609 (82.76%), Query Frame = 1

Query: 5   STPWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHG 64
           STPWNT+LREL+K+C F +AL++Y Q+L HG  PNAFTFPFALKSCAALSLP+ G   H 
Sbjct: 5   STPWNTRLRELSKQCLFFEALTVYRQMLHHGHSPNAFTFPFALKSCAALSLPLAGSLLHC 64

Query: 65  QIIKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKC 124
            ++K GCE EPFVQT LISMYC+  LV++AR+VFDEN  SRKL+VCYNALISG+ SNSK 
Sbjct: 65  HVVKTGCEPEPFVQTSLISMYCKCCLVDDARRVFDENPHSRKLTVCYNALISGHTSNSKF 124

Query: 125 SDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCF 184
           SDAV LFRQM   GV VNSVT+LGL+P C +P++L LG  LHG ++K G D D+SV NC 
Sbjct: 125 SDAVSLFRQMRAAGVEVNSVTMLGLVPGCAAPVHLGLGMCLHGCSVKCGFDVDLSVTNCL 184

Query: 185 ITMYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDP 244
           +TMY+KCGSVD+A+KLFD MP KGLI+WNAM+SGYAQNG+AT+VL LY+ M+  GV PDP
Sbjct: 185 LTMYVKCGSVDHARKLFDAMPEKGLITWNAMISGYAQNGLATHVLNLYKEMESCGVSPDP 244

Query: 245 VTHVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDE 304
           VT VGVLSSC ++GA  VG EVE +I++ GF +NP+L+NAL+NMYARCGNL KA A+FD 
Sbjct: 245 VTLVGVLSSCTHIGAHGVGREVERRIESCGFGSNPYLSNALVNMYARCGNLVKAHAIFDA 304

Query: 305 MPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQG 364
           MPE++LVSWTAIIGGYG+HGHGEIA +LF +MI +GI PD   FV++LSACSHAGL D+G
Sbjct: 305 MPEKSLVSWTAIIGGYGLHGHGEIASELFNKMIMTGIRPDKAVFVTILSACSHAGLMDKG 364

Query: 365 LEYFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACK 424
           LEYF  M ++  LQPGPEHYSC+VDLLGRAGRL EA+ LIESMP+KPDGAVWGALLGACK
Sbjct: 365 LEYFVAMEKRCGLQPGPEHYSCMVDLLGRAGRLQEAKELIESMPVKPDGAVWGALLGACK 424

Query: 425 IHKNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGC 484
           IHKNVE+AELAFEHVIELEP NIGYYVLLSNIY DAKN +GVL++R M+++RKLKK+PGC
Sbjct: 425 IHKNVEIAELAFEHVIELEPTNIGYYVLLSNIYSDAKNLEGVLKVRVMVRERKLKKEPGC 484

Query: 485 SYVELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDDRDESNKDLLTGVGV 544
           SYVE KGRVH F+ GD+ H QAEEIY++LEELE LV++ G  +       N++ L G  V
Sbjct: 485 SYVECKGRVHVFLAGDKTHCQAEEIYKMLEELETLVKEPGRGR-------NEEQLIGANV 544

Query: 545 HSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFKN 604
           HSEKL VAF LLNT  GTE+V+IKNLR+C DCHLF K+VSKIV RQ  VRD TRFHHF+N
Sbjct: 545 HSEKLTVAFALLNTEPGTEIVVIKNLRVCGDCHLFIKLVSKIVDRQFVVRDATRFHHFRN 604

Query: 605 GSCSCKDYW 614
           G CSCKDYW
Sbjct: 605 GVCSCKDYW 606

BLAST of ClCG04G010100 vs. NCBI nr
Match: gi|1009160965|ref|XP_015898638.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Ziziphus jujuba])

HSP 1 Score: 881.7 bits (2277), Expect = 7.3e-253
Identity = 420/607 (69.19%), Postives = 505/607 (83.20%), Query Frame = 1

Query: 7   PWNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHGQI 66
           PWN++LRELA +C F +AL+LY Q+LR G  PNAFTFP ALKSCAALSL + G+  HG +
Sbjct: 29  PWNSRLRELANQCHFAEALTLYRQMLRSGHPPNAFTFPSALKSCAALSLLVTGKLLHGHV 88

Query: 67  IKVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKCSD 126
           +K GCE EPFVQT LISMYCR +L++NAR+VF++N  SRKL+VCYNALISGY SNSK SD
Sbjct: 89  VKTGCEPEPFVQTSLISMYCRCSLIKNARRVFEDNDSSRKLTVCYNALISGYTSNSKISD 148

Query: 127 AVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCFIT 186
           AVLLFR+M E G+ VNSVT+LGLIP C+ P++L LG  LHG  +K GLD D+SV NC +T
Sbjct: 149 AVLLFRRMREAGLSVNSVTMLGLIPGCIDPVHLGLGMCLHGCIIKSGLDIDLSVGNCLLT 208

Query: 187 MYMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDPVT 246
           MY+KCGSVDYA+ +FDEMP KGLI+WNAM+SGYAQNG+AT+VL+LYR M+  G+RPDPVT
Sbjct: 209 MYVKCGSVDYARSVFDEMPGKGLITWNAMISGYAQNGLATHVLDLYREMEFLGIRPDPVT 268

Query: 247 HVGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDEMP 306
            VGVLSSCA+LGA  VG EVE KI+  GF +N FL+N LINMYARCGNL KA A+F+ M 
Sbjct: 269 LVGVLSSCAHLGAHGVGREVEQKIKFHGFGSNTFLSNCLINMYARCGNLVKAHAIFNSMV 328

Query: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQGLE 366
           E+++VSWT IIGGYGMHGHGEIAVQLF+EM+R+GI PD T FVSVLSACSHAGLT++GLE
Sbjct: 329 EKSIVSWTVIIGGYGMHGHGEIAVQLFDEMVRTGIRPDKTIFVSVLSACSHAGLTEKGLE 388

Query: 367 YFKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIH 426
           YF  M RKY LQPGPEHYSC+VDLLGRAGRL EA ++I SM +KPDGAVWGALL ACKIH
Sbjct: 389 YFTAMERKYGLQPGPEHYSCMVDLLGRAGRLKEAEDMIGSMQVKPDGAVWGALLNACKIH 448

Query: 427 KNVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGCSY 486
           KNV+LAELAF+ VIELEP N+GYYVLLSNIY D +N +GVL +R MM++R+LKK+PG SY
Sbjct: 449 KNVDLAELAFKRVIELEPRNVGYYVLLSNIYTDGENLEGVLNVRKMMRERQLKKEPGYSY 508

Query: 487 VELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDDRDESNKDLLTGVGVHS 546
           VELKG+V+ F+ GDR H Q  EIY++L ELE+LV++  E K++     N++LL   GVHS
Sbjct: 509 VELKGKVNIFLAGDRTHHQTVEIYKMLYELESLVKELDEYKENKIQGKNEELLISEGVHS 568

Query: 547 EKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFKNGS 606
           E+LA+AFGLLNT+ GTE+++IKNLR C DCHLF K+VSKIV RQ  +RD TRFHHF+NG 
Sbjct: 569 ERLAIAFGLLNTLPGTEIIVIKNLRACRDCHLFIKLVSKIVDRQFIIRDATRFHHFENGI 628

Query: 607 CSCKDYW 614
           CSCKDYW
Sbjct: 629 CSCKDYW 635

BLAST of ClCG04G010100 vs. NCBI nr
Match: gi|359482011|ref|XP_002276416.2| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Vitis vinifera])

HSP 1 Score: 880.2 bits (2273), Expect = 2.1e-252
Identity = 415/606 (68.48%), Postives = 503/606 (83.00%), Query Frame = 1

Query: 8   WNTQLRELAKRCQFLQALSLYPQLLRHGGRPNAFTFPFALKSCAALSLPILGEQFHGQII 67
           WN +LRELA++  F +AL+LY Q+L  G  PNAFTFPFA KSCA+LSLP+ G Q HG +I
Sbjct: 24  WNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVI 83

Query: 68  KVGCEFEPFVQTGLISMYCRGTLVENARKVFDENSQSRKLSVCYNALISGYVSNSKCSDA 127
           K GCE EPFVQT LISMYC+ + + +ARKVFDEN  SR L+VCYNALI+GY  NS+ SDA
Sbjct: 84  KTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDA 143

Query: 128 VLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGSSLHGSTLKYGLDSDVSVVNCFITM 187
           VLLFRQM +EGV VN+VT+LGLIPVC  PI+L  G+SLH  ++++GLD D+SV NC +TM
Sbjct: 144 VLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTM 203

Query: 188 YMKCGSVDYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYRNMDMHGVRPDPVTH 247
           Y++CGSVD+A+KLFD MP KGLI+WNAM+SGYAQNG+A +VL+LYR M+  G+ PDPVT 
Sbjct: 204 YVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTL 263

Query: 248 VGVLSSCANLGAQSVGHEVELKIQASGFNNNPFLNNALINMYARCGNLTKAQAVFDEMPE 307
           VGVLSSCA+LGA + G EVE +I+ SGF  NPFL NALINMYARCGNL KA+A+FD M E
Sbjct: 264 VGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTE 323

Query: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGLTDQGLEY 367
           + ++SWTAII GYGMHG GE+AVQLF+EMI S  +PDG AFVSVLSACSHAGLT++GL Y
Sbjct: 324 KNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYY 383

Query: 368 FKMMTRKYQLQPGPEHYSCIVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIHK 427
           F  M R Y LQPGPEHYSC+VDLLGRAGRL EAR LI SM ++PDGAVWGALLGACKIH+
Sbjct: 384 FTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHR 443

Query: 428 NVELAELAFEHVIELEPANIGYYVLLSNIYYDAKNSKGVLRIRFMMKQRKLKKDPGCSYV 487
           NVELAELAFE VIE EP NIGYYVLLSNI+ +A N +G+LR+R MM++RKLKK+PGCSYV
Sbjct: 444 NVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYV 503

Query: 488 ELKGRVHPFIVGDRNHPQAEEIYRVLEELEALVQKFGEPKKDDRDESNKDLLTGVGVHSE 547
           E +GR+H F+ GDR HPQA+EIY +L+ LE ++++ G    +D++  N++L+TG+GVHSE
Sbjct: 504 EYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDNDQESRNEELITGMGVHSE 563

Query: 548 KLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDPTRFHHFKNGSC 607
           KLA+AFGL+NT  GTE+ +IKNLR+C DCHLF K+VS+IV RQL VRD TRFHHFKNG C
Sbjct: 564 KLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGVC 623

Query: 608 SCKDYW 614
           SCKDYW
Sbjct: 624 SCKDYW 629

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP223_ARATH2.5e-23263.71Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis th... [more]
PPR21_ARATH7.8e-13839.97Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
PP341_ARATH1.8e-13441.67Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN... [more]
PPR32_ARATH6.9e-13440.75Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP224_ARATH9.9e-13338.52Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0KFC9_CUCSA0.0e+0089.74Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452690 PE=4 SV=1[more]
F6HKM1_VITVI1.5e-25268.48Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g03150 PE=4 SV=... [more]
V4SWJ4_9ROSI2.9e-24869.07Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011274mg PE=4 SV=1[more]
W9R4V5_9ROSA7.1e-24766.61Uncharacterized protein OS=Morus notabilis GN=L484_019144 PE=4 SV=1[more]
A0A0D2RWW9_GOSRA6.0e-24668.81Uncharacterized protein OS=Gossypium raimondii GN=B456_006G154800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G11460.11.4e-23363.71 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.14.4e-13939.97 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G30700.11.0e-13541.67 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G11290.13.9e-13540.75 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G12770.15.6e-13438.52 mitochondrial editing factor 22[more]
Match NameE-valueIdentityDescription
gi|659125232|ref|XP_008462579.1|0.0e+0089.74PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Cucum... [more]
gi|449451271|ref|XP_004143385.1|0.0e+0089.74PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Cucum... [more]
gi|645276950|ref|XP_008243533.1|2.1e-25569.62PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Prunu... [more]
gi|1009160965|ref|XP_015898638.1|7.3e-25369.19PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Zizip... [more]
gi|359482011|ref|XP_002276416.2|2.1e-25268.48PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Vitis... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016554 cytidine to uridine editing
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG04G010100.1ClCG04G010100.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 383..407
score: 0.11coord: 283..308
score: 4.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 310..356
score: 7.0E-9coord: 108..150
score: 1.3E-8coord: 209..255
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 210..243
score: 5.6E-6coord: 283..308
score: 0.0024coord: 109..142
score: 2.2E-6coord: 311..344
score: 9.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 344..374
score: 7.717coord: 243..277
score: 5.251coord: 380..410
score: 7.443coord: 177..207
score: 8.177coord: 4..38
score: 6.939coord: 412..442
score: 5.218coord: 39..73
score: 5.218coord: 278..308
score: 9.547coord: 107..141
score: 9.821coord: 74..104
score: 6.029coord: 309..343
score: 11.641coord: 208..242
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 264..305
score: 1.5E-6coord: 375..463
score: 1.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 427..463
score: 4.17E-5coord: 276..302
score: 4.1
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 6..487
score:
NoneNo IPR availablePANTHERPTHR24015:SF505SUBFAMILY NOT NAMEDcoord: 6..487
score:

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG04G010100Wax gourdwcgwgoB376
ClCG04G010100Wax gourdwcgwgoB382
ClCG04G010100Watermelon (Charleston Gray)wcgwcgB051
ClCG04G010100Watermelon (Charleston Gray)wcgwcgB128
ClCG04G010100Cucumber (Gy14) v1cgywcgB431
ClCG04G010100Cucumber (Gy14) v1cgywcgB661
ClCG04G010100Cucurbita maxima (Rimu)cmawcgB230
ClCG04G010100Cucurbita maxima (Rimu)cmawcgB558
ClCG04G010100Cucurbita maxima (Rimu)cmawcgB736
ClCG04G010100Cucurbita maxima (Rimu)cmawcgB768
ClCG04G010100Cucurbita moschata (Rifu)cmowcgB214
ClCG04G010100Cucurbita moschata (Rifu)cmowcgB556
ClCG04G010100Cucurbita moschata (Rifu)cmowcgB742
ClCG04G010100Cucurbita moschata (Rifu)cmowcgB769
ClCG04G010100Wild cucumber (PI 183967)cpiwcgB225
ClCG04G010100Wild cucumber (PI 183967)cpiwcgB489
ClCG04G010100Cucumber (Chinese Long) v2cuwcgB221
ClCG04G010100Cucumber (Chinese Long) v2cuwcgB465
ClCG04G010100Melon (DHL92) v3.5.1mewcgB119
ClCG04G010100Melon (DHL92) v3.5.1mewcgB330
ClCG04G010100Watermelon (97103) v1wcgwmB251
ClCG04G010100Cucurbita pepo (Zucchini)cpewcgB071
ClCG04G010100Cucurbita pepo (Zucchini)cpewcgB432
ClCG04G010100Cucurbita pepo (Zucchini)cpewcgB553
ClCG04G010100Cucurbita pepo (Zucchini)cpewcgB675
ClCG04G010100Cucurbita pepo (Zucchini)cpewcgB784
ClCG04G010100Bottle gourd (USVL1VR-Ls)lsiwcgB068
ClCG04G010100Bottle gourd (USVL1VR-Ls)lsiwcgB241
ClCG04G010100Cucumber (Gy14) v2cgybwcgB202
ClCG04G010100Cucumber (Gy14) v2cgybwcgB427
ClCG04G010100Melon (DHL92) v3.6.1medwcgB113
ClCG04G010100Melon (DHL92) v3.6.1medwcgB324
ClCG04G010100Silver-seed gourdcarwcgB0242
ClCG04G010100Silver-seed gourdcarwcgB0789
ClCG04G010100Silver-seed gourdcarwcgB0902
ClCG04G010100Cucumber (Chinese Long) v3cucwcgB224
ClCG04G010100Cucumber (Chinese Long) v3cucwcgB486
ClCG04G010100Watermelon (97103) v2wcgwmbB195
ClCG04G010100Watermelon (97103) v2wcgwmbB197