CmoCh03G009180 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G009180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Epidermal patterning factor-like protein 2
Location	Cmo_Chr03 : 7015400 .. 7016795 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATGGCGTGATTAGGTGGGCGAGTTGAGAACAAAATCACAACAATCCCAAAACTTGAATTTTAAACCAACAACCAAAAACAGAAGAGGAGGAAAAGGAAGACCAAATCCCACTCTCACACACCTCCCATTGCGCTGCTCTCACGTCTGGCTATGGAACAACTTGGCAGCATTTAGGAGCATTTGCAAATTTTGCTCTCATCTTTCGGCTCCTTGTTATTTTGATTGCCGCCATTACAATTCCTACTTGCAACTCTCATTCTCACGAATTTTTCTTCCCTCTCACTTCTTAACTCTTATTTTATTCTATTTTCTGTTGGGTTAAAGTGTTTGGAGGGGGGGGCTCTTCTTTCGAGTTCTGAGGGGTTCTGCACTTTTTGGTACTCTCCCTTCTTTCTTGTGTTTCTTTTTCATTTGTCTTCCACGTTCAATCATCTCAAATATCTTTCCCACACTAACACACATATTCAGACCAAATTATATTATATACACGTACCACCGCCGTTGAGACCAAAATCAGAACCTATTCTCTCACCGATTCTGATTTAAAATTCACTTCTCCACCCACTTTCTTCTTTCCTTTCTTTCTGAATATCTGAGCTCTCCATCTCCAGGGACAATTCCCTGTCTCTTTCTCTGTGAGAACAATAGGAAAATGGGGTGTGAGTGTAACAACAATGGCGTCGTCATTGGGCGCAGCAGAATCTTGTGTGCGACTGTTTCTTTTCTCTGTCTTCTGATATTGGCATCGACCCAGATGAGAATCAAGGCTGAAGGTAACTGGGTATCTTTTGGATCTTCAAAACAGAGTCCAAAAACGGACTTTTATTCTTCATCTTACAATTTCAGTTCGATTTGAATCATCTTGTGAATCGTTTTTCTTTGCAGGTAGATCGATTTCAATGAGGACCAAGGTCAGTCCAGAAACCACCGCTCTTCCCTCCCTTTCTCAAATACTTCATTGTTTCTGTGAAAGCTTAGTTAATTGAGAAGAATAATAATTTTGTGTTTCTTTTTTTGTTTTGATGCCTTGGGATAGACAGTGAATGAAGATAAGGAGATATTAAGAGGACAAATTGGATCAAAGCCACCAAAATGTGAGAGAAGATGCAGCTGGTGCGGTCACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAATCAGCAACTAAAAAATCTTCAGCAGTGAAGAACATAGTTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAACTATTTTATATAACCCCCCCTTCAATTTTACTCTCTCTATCTCTCTGTAAATTAATGATTATATGATTGTTAATTTCTTTAACTCAACCACTCTCTCCCCCTCTGTTTCGTTTTGGG

mRNA sequence

GATATGGCGTGATTAGGTGGGCGAGTTGAGAACAAAATCACAACAATCCCAAAACTTGAATTTTAAACCAACAACCAAAAACAGAAGAGGAGGAAAAGGAAGACCAAATCCCACTCTCACACACCTCCCATTGCGCTGCTCTCACGTCTGGCTATGGAACAACTTGGCAGCATTTAGGAGCATTTGCAAATTTTGCTCTCATCTTTCGGCTCCTTGTTATTTTGATTGCCGCCATTACAATTCCTACTTGCAACTCTCATTCTCACGAATTTTTCTTCCCTCTCACTTCTTAACTCTTATTTTATTCTATTTTCTGTTGGGTTAAAGTGTTTGGAGGGGGGGGCTCTTCTTTCGAGTTCTGAGGGGTTCTGCACTTTTTGGTACTCTCCCTTCTTTCTTGTGTTTCTTTTTCATTTGTCTTCCACGTTCAATCATCTCAAATATCTTTCCCACACTAACACACATATTCAGACCAAATTATATTATATACACGTACCACCGCCGTTGAGACCAAAATCAGAACCTATTCTCTCACCGATTCTGATTTAAAATTCACTTCTCCACCCACTTTCTTCTTTCCTTTCTTTCTGAATATCTGAGCTCTCCATCTCCAGGGACAATTCCCTGTCTCTTTCTCTGTGAGAACAATAGGAAAATGGGGTGTGAGTGTAACAACAATGGCGTCGTCATTGGGCGCAGCAGAATCTTGTGTGCGACTGTTTCTTTTCTCTGTCTTCTGATATTGGCATCGACCCAGATGAGAATCAAGGCTGAAGGTAGATCGATTTCAATGAGGACCAAGACAGTGAATGAAGATAAGGAGATATTAAGAGGACAAATTGGATCAAAGCCACCAAAATGTGAGAGAAGATGCAGCTGGTGCGGTCACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAATCAGCAACTAAAAAATCTTCAGCAGTGAAGAACATAGTTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAACTATTTTATATAACCCCCCCTTCAATTTTACTCTCTCTATCTCTCTGTAAATTAATGATTATATGATTGTTAATTTCTTTAACTCAACCACTCTCTCCCCCTCTGTTTCGTTTTGGG

Coding sequence (CDS)

ATGGGGTGTGAGTGTAACAACAATGGCGTCGTCATTGGGCGCAGCAGAATCTTGTGTGCGACTGTTTCTTTTCTCTGTCTTCTGATATTGGCATCGACCCAGATGAGAATCAAGGCTGAAGGTAGATCGATTTCAATGAGGACCAAGACAGTGAATGAAGATAAGGAGATATTAAGAGGACAAATTGGATCAAAGCCACCAAAATGTGAGAGAAGATGCAGCTGGTGCGGTCACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAATCAGCAACTAAAAAATCTTCAGCAGTGAAGAACATAGTTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAA

Homology

[Close]

BLAST of CmoCh03G009180 vs. Swiss-Prot
Match: EPFL2_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.3e-22
Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = 1


Query: 25  LCLLILASTQMRIKAEGR----SISMRTKTVNED-KEILRGQIGSKPPKCER-RCSWCGH 84
           L LLIL ST   + A GR    S+   TK+ ++D K ++RG IGS+PP+CER RC  CGH
Sbjct: 12  LILLILNSTHFSLMANGRPEPDSVEF-TKSGDQDVKMMMRGLIGSRPPRCERVRCRSCGH 71

Query: 85  CEAIQVPANPQK-------SATKKSSAVKNIVYAR-DEASNYKPMSWKCKCGSLIFNP 129
           CEAIQVP NPQ        +++  SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 72  CEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]

BLAST of CmoCh03G009180 vs. Swiss-Prot
Match: EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09
Identity = 29/78 (37.18%), Postives = 40/78 (51.28%), Query Frame = 1


Query: 59  RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAV--------KNIVYARDEAS 118
           + ++GS PP C  RC+ C  C AIQVP  P +S   + +           ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 119 NYKPMSWKCKCGSLIFNP 129
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of CmoCh03G009180 vs. Swiss-Prot
Match: EPFL3_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-07
Identity = 28/73 (38.36%), Postives = 39/73 (53.42%), Query Frame = 1


Query: 52  NEDKEIL---RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDE 111
           NE+KE +   R +IGSKPP CE++C  C  CEAIQ P             + +I +    
Sbjct: 44  NENKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPH 103

Query: 112 ASNYKPMSWKCKC 122
            +NY+P  W+C C
Sbjct: 104 YANYQPEGWRCHC 104

[Close]

BLAST of CmoCh03G009180 vs. TrEMBL
Match: A0A0A0KGK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497000 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.0e-51
Identity = 105/131 (80.15%), Postives = 109/131 (83.21%), Query Frame = 1


Query: 1   MGCECNNNGVVIGRSRI-LCATVSFLCLLILASTQMRIKAEGRSISMRTKTVN--EDKEI 60
           MGCEC NNGV+  RSRI LC  VS L  LILASTQMR  AEGR IS   KTVN  EDK +
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSW 120
           LRGQIGS+PPKCERRCSWCGHCEAIQVPANPQKS TK SS +KNI YARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 129
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of CmoCh03G009180 vs. TrEMBL
Match: B9T176_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0338850 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-32
Identity = 76/136 (55.88%), Postives = 99/136 (72.79%), Query Frame = 1


Query: 1   MGC-ECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMR---TKTVNEDKE 60
           MGC +C ++  ++ + R+   T+SF+ LLI +STQ+R KAEGR+       ++TVNE+K 
Sbjct: 1   MGCSDCTHHSFLLCQ-RLGYVTISFMFLLISSSTQVRFKAEGRATPKSASFSQTVNEEKM 60

Query: 61  ILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQ---KSATKKSSAVKNIVYAR-DEASNY 120
           ++R QIGS+PP+CE+RCS CGHCEAIQVP NPQ    +    SS   N+ YAR D+ASNY
Sbjct: 61  LMRSQIGSRPPRCEKRCSTCGHCEAIQVPTNPQINHGNRNYSSSTFSNVAYARGDDASNY 120

Query: 121 KPMSWKCKCGSLIFNP 129
           KPMSWKCKCG LIFNP
Sbjct: 121 KPMSWKCKCGDLIFNP 135

[Close]

BLAST of CmoCh03G009180 vs. TrEMBL
Match: A0A067K7N5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12593 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 7.1e-32
Identity = 77/133 (57.89%), Postives = 93/133 (69.92%), Query Frame = 1


Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMR---TKTVNEDKEI 60
           MGC      + + + R+ C ++SFL LLI +ST +R KAEGR+       + T NE+K I
Sbjct: 1   MGCTTTPPNLFLCQ-RLRCLSISFLFLLISSSTHLRFKAEGRANPKSAGVSGTENEEKMI 60

Query: 61  LRGQIGSKPPKCERRCSWCGHCEAIQVPANPQ-KSATKKSSAVKNIVYAR-DEASNYKPM 120
           +R QIGS+PP+CERRCS CGHCEAIQVP NPQ     +  S+V NI YAR D ASNYKPM
Sbjct: 61  MRSQIGSRPPRCERRCSSCGHCEAIQVPTNPQVNHGNRNYSSVSNIAYARGDGASNYKPM 120

Query: 121 SWKCKCGSLIFNP 129
           SWKCKCG LIFNP
Sbjct: 121 SWKCKCGDLIFNP 132

[Close]

BLAST of CmoCh03G009180 vs. TrEMBL
Match: A0A0D2PDS4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G228200 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.3e-29
Identity = 73/112 (65.18%), Postives = 83/112 (74.11%), Query Frame = 1


Query: 23  SFLCLLILASTQMRIKAEGRS---ISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHC 82
           S L LLIL+STQ+R K EGRS    +  +K VNE+K ILR QIGS+PPKCERRCS CGHC
Sbjct: 18  SLLFLLILSSTQVRYKVEGRSNPKSNSFSKMVNEEKTILRAQIGSRPPKCERRCSSCGHC 77

Query: 83  EAIQVPANPQ-KSATKKSSA-VKNIVYAR-DEASNYKPMSWKCKCGSLIFNP 129
           EAI VP NPQ K   K SS  + N  YAR D +SNYKP+SWKCKCG+ IFNP
Sbjct: 78  EAILVPTNPQAKHGNKNSSTLISNAAYARGDGSSNYKPISWKCKCGNFIFNP 129

[Close]

BLAST of CmoCh03G009180 vs. TrEMBL
Match: A5AQ12_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037684 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.3e-29
Identity = 67/115 (58.26%), Postives = 86/115 (74.78%), Query Frame = 1


Query: 21  TVSFLCLLILASTQMRIKAEGRSISMR----TKTVNEDKEILRGQIGSKPPKCERRCSWC 80
           T+  L LLIL+STQ++  AEGR++  +    ++ V+E+K I+R QIGS+PPKCERRC+ C
Sbjct: 17  TIYLLFLLILSSTQLKFMAEGRAVLFKPVGFSQPVSEEKAIVRAQIGSRPPKCERRCNSC 76

Query: 81  GHCEAIQVPANPQKSA--TKKSSAVKNIVYAR-DEASNYKPMSWKCKCGSLIFNP 129
           GHCEAIQVPANPQ     T  S+ V  I Y+R D+ SNYKPMSWKCKCG+ +FNP
Sbjct: 77  GHCEAIQVPANPQVKTPNTNSSTVVGTIAYSRGDDNSNYKPMSWKCKCGNFVFNP 131

[Close]

BLAST of CmoCh03G009180 vs. TAIR10
Match: AT4G37810.1 (AT4G37810.1 unknown protein)

HSP 1 Score: 104.8 bits (260), Expect = 4.1e-23
Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = 1


Query: 25  LCLLILASTQMRIKAEGR----SISMRTKTVNED-KEILRGQIGSKPPKCER-RCSWCGH 84
           L LLIL ST   + A GR    S+   TK+ ++D K ++RG IGS+PP+CER RC  CGH
Sbjct: 12  LILLILNSTHFSLMANGRPEPDSVEF-TKSGDQDVKMMMRGLIGSRPPRCERVRCRSCGH 71

Query: 85  CEAIQVPANPQK-------SATKKSSAVKNIVYAR-DEASNYKPMSWKCKCGSLIFNP 129
           CEAIQVP NPQ        +++  SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 72  CEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]

BLAST of CmoCh03G009180 vs. TAIR10
Match: AT5G10310.1 (AT5G10310.1 unknown protein)

HSP 1 Score: 63.9 bits (154), Expect = 8.1e-11
Identity = 29/78 (37.18%), Postives = 40/78 (51.28%), Query Frame = 1


Query: 59  RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAV--------KNIVYARDEAS 118
           + ++GS PP C  RC+ C  C AIQVP  P +S   + +           ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 119 NYKPMSWKCKCGSLIFNP 129
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of CmoCh03G009180 vs. TAIR10
Match: AT3G13898.1 (AT3G13898.1 unknown protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-08
Identity = 28/73 (38.36%), Postives = 39/73 (53.42%), Query Frame = 1


Query: 52  NEDKEIL---RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDE 111
           NE+KE +   R +IGSKPP CE++C  C  CEAIQ P             + +I +    
Sbjct: 44  NENKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPH 103

Query: 112 ASNYKPMSWKCKC 122
            +NY+P  W+C C
Sbjct: 104 YANYQPEGWRCHC 104

[Close]

BLAST of CmoCh03G009180 vs. NCBI nr
Match: gi|449451341|ref|XP_004143420.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 5.8e-51
Identity = 105/131 (80.15%), Postives = 109/131 (83.21%), Query Frame = 1


Query: 1   MGCECNNNGVVIGRSRI-LCATVSFLCLLILASTQMRIKAEGRSISMRTKTVN--EDKEI 60
           MGCEC NNGV+  RSRI LC  VS L  LILASTQMR  AEGR IS   KTVN  EDK +
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSW 120
           LRGQIGS+PPKCERRCSWCGHCEAIQVPANPQKS TK SS +KNI YARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 129
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of CmoCh03G009180 vs. NCBI nr
Match: gi|659079787|ref|XP_008440444.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo])

HSP 1 Score: 207.2 bits (526), Expect = 1.7e-50
Identity = 104/131 (79.39%), Postives = 108/131 (82.44%), Query Frame = 1


Query: 1   MGCECNNNGVVIGRSRI-LCATVSFLCLLILASTQMRIKAEGRSISMRTKTVN--EDKEI 60
           MGCEC NNGV+  RSRI LC  VS L  LIL STQMR  AEGR IS   KTVN  EDK +
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSW 120
           LRGQIGS+PPKCERRCSWCGHCEAIQVPANPQKS TK SS +KNI YARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 129
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of CmoCh03G009180 vs. NCBI nr
Match: gi|255582397|ref|XP_002531987.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Ricinus communis])

HSP 1 Score: 146.4 bits (368), Expect = 3.5e-32
Identity = 76/136 (55.88%), Postives = 99/136 (72.79%), Query Frame = 1


Query: 1   MGC-ECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMR---TKTVNEDKE 60
           MGC +C ++  ++ + R+   T+SF+ LLI +STQ+R KAEGR+       ++TVNE+K 
Sbjct: 1   MGCSDCTHHSFLLCQ-RLGYVTISFMFLLISSSTQVRFKAEGRATPKSASFSQTVNEEKM 60

Query: 61  ILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQ---KSATKKSSAVKNIVYAR-DEASNY 120
           ++R QIGS+PP+CE+RCS CGHCEAIQVP NPQ    +    SS   N+ YAR D+ASNY
Sbjct: 61  LMRSQIGSRPPRCEKRCSTCGHCEAIQVPTNPQINHGNRNYSSSTFSNVAYARGDDASNY 120

Query: 121 KPMSWKCKCGSLIFNP 129
           KPMSWKCKCG LIFNP
Sbjct: 121 KPMSWKCKCGDLIFNP 135

[Close]

BLAST of CmoCh03G009180 vs. NCBI nr
Match: gi|802646175|ref|XP_012079478.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Jatropha curcas])

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-31
Identity = 77/133 (57.89%), Postives = 93/133 (69.92%), Query Frame = 1


Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMR---TKTVNEDKEI 60
           MGC      + + + R+ C ++SFL LLI +ST +R KAEGR+       + T NE+K I
Sbjct: 1   MGCTTTPPNLFLCQ-RLRCLSISFLFLLISSSTHLRFKAEGRANPKSAGVSGTENEEKMI 60

Query: 61  LRGQIGSKPPKCERRCSWCGHCEAIQVPANPQ-KSATKKSSAVKNIVYAR-DEASNYKPM 120
           +R QIGS+PP+CERRCS CGHCEAIQVP NPQ     +  S+V NI YAR D ASNYKPM
Sbjct: 61  MRSQIGSRPPRCERRCSSCGHCEAIQVPTNPQVNHGNRNYSSVSNIAYARGDGASNYKPM 120

Query: 121 SWKCKCGSLIFNP 129
           SWKCKCG LIFNP
Sbjct: 121 SWKCKCGDLIFNP 132

[Close]

BLAST of CmoCh03G009180 vs. NCBI nr
Match: gi|1009145628|ref|XP_015890436.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Ziziphus jujuba])

HSP 1 Score: 141.7 bits (356), Expect = 8.7e-31
Identity = 72/115 (62.61%), Postives = 87/115 (75.65%), Query Frame = 1


Query: 21  TVSFLCLLILASTQMRIKAEGRSISMRT----KTVNEDKEILRGQIGSKPPKCERRCSWC 80
           ++S L L++L+S Q+R  AEGR+IS R     +T +E+K I+R QIGS+PP+CERRCS C
Sbjct: 22  SISLLVLMVLSSAQLRFVAEGRAISKRIVFTQQTASENKAIVRAQIGSRPPRCERRCSSC 81

Query: 81  GHCEAIQVPANPQKSATKK--SSAVKNIVYAR-DEASNYKPMSWKCKCGSLIFNP 129
           GHCEAIQVPANPQ  A  K  SS + NI YAR D+ SNYKPMSWKCKCG  IFNP
Sbjct: 82  GHCEAIQVPANPQVKAGNKSNSSMMVNIAYARGDDNSNYKPMSWKCKCGDFIFNP 136

The following BLAST results are available for this feature:

BLAST of CmoCh03G009180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EPFL2_ARATH	7.3e-22	50.85	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana GN=EPFL2 PE=2...	[more]
EPFL1_ARATH	1.4e-09	37.18	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1...	[more]
EPFL3_ARATH	2.3e-07	38.36	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana GN=EPFL3 PE=1...	[more]

BLAST of CmoCh03G009180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGK0_CUCSA	4.0e-51	80.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497000 PE=4 SV=1	[more]
B9T176_RICCO	2.5e-32	55.88	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0338850 PE=4 SV=1	[more]
A0A067K7N5_JATCU	7.1e-32	57.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12593 PE=4 SV=1	[more]
A0A0D2PDS4_GOSRA	3.3e-29	65.18	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G228200 PE=4 SV=1	[more]
A5AQ12_VITVI	3.3e-29	58.26	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037684 PE=4 SV=1	[more]

BLAST of CmoCh03G009180 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37810.1	4.1e-23	50.85	unknown protein	[more]
AT5G10310.1	8.1e-11	37.18	unknown protein	[more]
AT3G13898.1	1.3e-08	38.36	unknown protein	[more]

BLAST of CmoCh03G009180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451341\|ref\|XP_004143420.1\|	5.8e-51	80.15	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus]	[more]
gi\|659079787\|ref\|XP_008440444.1\|	1.7e-50	79.39	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo]	[more]
gi\|255582397\|ref\|XP_002531987.1\|	3.5e-32	55.88	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Ricinus communis]	[more]
gi\|802646175\|ref\|XP_012079478.1\|	1.0e-31	57.89	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Jatropha curcas]	[more]
gi\|1009145628\|ref\|XP_015890436.1\|	8.7e-31	62.61	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G009180.1	CmoCh03G009180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33109	FAMILY NOT NAMED	coord: 104..128 score: 4.4E-42coord: 11..88 score: 4.4
None	No IPR available	PANTHER	PTHR33109:SF7	SUBFAMILY NOT NAMED	coord: 104..128 score: 4.4E-42coord: 11..88 score: 4.4
None	No IPR available	PFAM	PF17181	EPF	coord: 62..128 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G009180	Cucsa.103510	Cucumber (Gy14) v1	cgycmoB0227
CmoCh03G009180	CmaCh03G008770	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G009180	CmaCh07G006200	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G009180	Cla014062	Watermelon (97103) v1	cmowmB623
CmoCh03G009180	Csa6G497000	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G009180	MELO3C011120	Melon (DHL92) v3.5.1	cmomeB587
CmoCh03G009180	MELO3C007667	Melon (DHL92) v3.5.1	cmomeB605
CmoCh03G009180	ClCG01G017930	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G009180	CSPI06G29250	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G009180	Lsi08G010590	Bottle gourd (USVL1VR-Ls)	cmolsiB607
CmoCh03G009180	Lsi01G008560	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G009180	Cp4.1LG19g10480	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G009180	Cp4.1LG10g01810	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G009180	Cp4.1LG11g05060	Cucurbita pepo (Zucchini)	cmocpeB607
CmoCh03G009180	MELO3C007667.2	Melon (DHL92) v3.6.1	cmomedB694
CmoCh03G009180	MELO3C011120.2	Melon (DHL92) v3.6.1	cmomedB673
CmoCh03G009180	CsaV3_2G030600	Cucumber (Chinese Long) v3	cmocucB0762
CmoCh03G009180	CsaV3_6G044450	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G009180	Cla97C01G017150	Watermelon (97103) v2	cmowmbB642
CmoCh03G009180	Cla97C08G155160	Watermelon (97103) v2	cmowmbB672
CmoCh03G009180	Bhi03G000831	Wax gourd	cmowgoB0792
CmoCh03G009180	CsGy6G028800	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G009180	CsGy2G021730	Cucumber (Gy14) v2	cgybcmoB227
CmoCh03G009180	Carg00760	Silver-seed gourd	carcmoB0551
CmoCh03G009180	Carg08263	Silver-seed gourd	carcmoB0086
CmoCh03G009180	Carg18518	Silver-seed gourd	carcmoB0004

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G009180	CmoCh05G005990	Cucurbita moschata (Rifu)	cmocmoB452
CmoCh03G009180	CmoCh07G006230	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:

None