CmoCh03G008720 (gene) Cucurbita moschata (Rifu)

BLAST of CmoCh03G008720 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 1.0e-160
Identity = 418/1336 (31.29%), Postives = 664/1336 (49.70%), Query Frame = 1

Query: 79   WYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAMQIRMELSTIQ 138
            W   D+   S I   ++++V++ ++   TAR  W  LE  + S +    + ++ +L  + 
Sbjct: 52   WADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALH 111

Query: 139  KKDMT-IADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYT 198
              + T    +      L   LA +G +IE+E+    +L  L   YD L T+I        
Sbjct: 112  MSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIE 171

Query: 199  VSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGR-GSRGRSRQLNSGHGQS 258
            + DV + +L  E    +     Q        R   R   N GR G+RG+S+  +    ++
Sbjct: 172  LKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRN 231

Query: 259  RRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAALATSGYT 318
                N PG       +      +  G+ N D      + +       N ++  +  SG  
Sbjct: 232  CYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPE 291

Query: 319  SDTNWYVDTGATDHITNDLERLTTRERYTGTD--QIQVANGAGLSISHIGNSLIS---GS 378
            S+  W VDT A+ H T   +      RY   D   +++ N +   I+ IG+  I    G 
Sbjct: 292  SE--WVVDTAASHHATPVRDLFC---RYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGC 351

Query: 379  SLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYFLVKDRVTKKLLL--HGRCKNGL 438
            +LVLK + +VP +  +LIS   +A D +    +  N    K R+TK  L+   G  +  L
Sbjct: 352  TLVLKDVRHVPDLRMNLIS--GIALDRDGYESYFANQ---KWRLTKGSLVIAKGVARGTL 411

Query: 439  YVLPHNFSQALLTA---KLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNAC 498
            Y       Q  L A   ++S + WH+R+GH  S   ++IL   +L       +   C+ C
Sbjct: 412  YRTNAEICQGELNAAQDEISVDLWHKRMGH-MSEKGLQILAKKSLISYAKGTTVKPCDYC 471

Query: 499  QLGKAHQLPFGSSQHVSTAPLQLIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLR 558
              GK H++ F +S       L L+++DV GP  I S+  +KY+V+F+DD SR +W+Y L+
Sbjct: 472  LFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILK 531

Query: 559  CKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEY--HRLHNYFKSTGIEHHISCPHTHQ 618
             K  V  VF +F   VE     K++ ++SD GGEY       Y  S GI H  + P T Q
Sbjct: 532  TKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQ 591

Query: 619  QNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFG 678
             NG+ ER +R IVE   ++L  A +P S+W EA  TAC+LINR PS  +  + P      
Sbjct: 592  HNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTN 651

Query: 679  KSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISR 738
            K   YS L+VFGC  + ++      KL  ++  CIF+GY                     
Sbjct: 652  KEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGY--------------------G 711

Query: 739  DVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLASFYTENAL---TDIEPVVSNSHMN 798
            D  F   ++                PV    +      + E+ +    D+   V N  + 
Sbjct: 712  DEEFGYRLWD---------------PVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIP 771

Query: 799  DGQTDNIASDNLSGVSLSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQH 858
            +  T    S+N +    ++ + +   E+  E   +   ++   +  EH    PT+   QH
Sbjct: 772  NFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEH----PTQGEEQH 831

Query: 859  -PMRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHP-- 918
             P+R   R  +                SR++ S   +   +I    EP +L+E + HP  
Sbjct: 832  QPLRRSERPRV---------------ESRRYPSTEYV---LISDDREPESLKEVLSHPEK 891

Query: 919  -RWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGF 978
             +   AM +E+ +L++N T+ LV    G   +  KWV+K+K+  D  + R KARLV KGF
Sbjct: 892  NQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGF 951

Query: 979  KQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPG 1038
            +Q+ G+D+ + FSPV+K ++IR ILSLA +    + Q+D++ AFLHG L+EE+YM QP G
Sbjct: 952  EQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEG 1011

Query: 1039 FQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREIT- 1098
            F+ + K K+ +CKL K+LYGLKQAP+ W+ +    +    +  + +D  ++  +  E   
Sbjct: 1012 FEVAGK-KHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNF 1071

Query: 1099 IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEV--KKTRDGIILSQ 1158
            I +L+YVDD++IV        +L   L   F +KDLG  +  LG+++  ++T   + LSQ
Sbjct: 1072 IILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQ 1131

Query: 1159 RRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEE-----QFKYRSTVGALQY- 1218
             +Y   +L+R NM+  KP+STP+    KL ++   P + EE     +  Y S VG+L Y 
Sbjct: 1132 EKYIERVLERFNMKNAKPVSTPLAGHLKLSKKM-CPTTVEEKGNMAKVPYSSAVGSLMYA 1191

Query: 1219 LTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMMLSGFSDA 1278
            +  TRPD+A AV  V ++L  P   HW AVK ILRY++GT    +    S  +L G++DA
Sbjct: 1192 MVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDA 1251

Query: 1279 DWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLL 1338
            D AG  D+R+S++G+        ISW S+ Q  V+ S+TEAEY A      EMIW+K  L
Sbjct: 1252 DMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFL 1311

Query: 1339 KELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKAMEVRFISSS 1384
            +ELG++Q K   ++CD+  A  L+ N ++HARTKHI+V +H++RE V  ++++V  IS++
Sbjct: 1312 QELGLHQ-KEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTN 1316

BLAST of CmoCh03G008720 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 340.5 bits (872), Expect = 1.0e-91
Identity = 189/494 (38.26%), Postives = 285/494 (57.69%), Query Frame = 1

Query: 899  WRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQ 958
            W  A+N EL+A K N TW +       N++DS+WV+ VK    G+  R KARLVA+GF Q
Sbjct: 906  WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965

Query: 959  RFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQ 1018
            ++ +DY +TF+PV + S+ R ILSL +     + Q+D++ AFL+G LKEE+YMR P G  
Sbjct: 966  KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGIS 1025

Query: 1019 DSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREI--TI 1078
             ++   + +CKL KA+YGLKQA + W       L E  F  S  D  ++IL    I   I
Sbjct: 1026 CNS---DNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI 1085

Query: 1079 YMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRY 1138
            Y+L+YVDD++I +          + L   F + DL  +++F+GI ++   D I LSQ  Y
Sbjct: 1086 YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAY 1145

Query: 1139 ALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFK--YRSTVGALQYLTM-TRP 1198
               +L + NME C  +STP+ S  K+  E    L+++E      RS +G L Y+ + TRP
Sbjct: 1146 VKKILSKFNMENCNAVSTPLPS--KINYEL---LNSDEDCNTPCRSLIGCLMYIMLCTRP 1205

Query: 1199 DLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMM---LSGFSDADWA 1258
            DL  AVN + +Y        W  +KR+LRY+KGT+ + +  +K+      + G+ D+DWA
Sbjct: 1206 DLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWA 1265

Query: 1259 GCPDDRRSTSGFAV-FLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKE 1318
            G   DR+ST+G+       NLI W++++Q +V+ SSTEAEY A+     E +W+K LL  
Sbjct: 1266 GSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTS 1325

Query: 1319 LGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKAMEVRFISSSDQ 1378
            + +      +++ DN G   + +NP  H R KHI++ +HF REQV    + + +I + +Q
Sbjct: 1326 INIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQ 1385

Query: 1379 VADILTKPLSKTPF 1384
            +ADI TKPL    F
Sbjct: 1386 LADIFTKPLPAARF 1391

BLAST of CmoCh03G008720 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.4e-55
Identity = 111/228 (48.68%), Postives = 152/228 (66.67%), Query Frame = 1

Query: 1076 IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRR 1135
            +Y+L+YVDDI++  SS+     LI +L   F++KDLG + YFLGI++K    G+ LSQ +
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 1136 YALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDL 1195
            YA  +L    M  CKPMSTP+                 +   +RS VGALQYLT+TRPD+
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLPLK---LNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDI 120

Query: 1196 AFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMM-LSGFSDADWAGCPD 1255
            ++AVN VCQ +H PT A +  +KR+LRYVKGT+  G+ I K++ + +  F D+DWAGC  
Sbjct: 121  SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 180

Query: 1256 DRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIW 1303
             RRST+GF  FLG N+ISWS+++Q TVSRSSTE EY+A+A   AE+ W
Sbjct: 181  TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmoCh03G008720 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 2.7e-36
Identity = 93/311 (29.90%), Postives = 168/311 (54.02%), Query Frame = 1

Query: 994  VDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLI 1053
            +D+  AFL+  + E +Y++QPPGF +   P +Y+ +L   +YGLKQAP  W+  +   L 
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNP-DYVWELYGGMYGLKQAPLLWNEHINNTLK 60

Query: 1054 ELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGG 1113
            ++GF     +  L+     +  IY+ +YVDD+++ + S +  +R+ Q+L   +++KDLG 
Sbjct: 61   KIGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 120

Query: 1114 LEYFLGIEVKKTRDG-IILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSA 1173
            ++ FLG+ + ++ +G I LS + Y         +   K   TP+ +++ LF      L  
Sbjct: 121  VDKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHL-- 180

Query: 1174 EEQFKYRSTVGALQYLTMT-RPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALG 1233
            ++   Y+S VG L +   T RPD+++ V+ + ++L  P   H  + +R+LRY+  T ++ 
Sbjct: 181  KDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMC 240

Query: 1234 VKIQK-STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRK-QATVSRSSTEAE 1293
            +K +  S + L+ + DA      D   ST G+   L    ++WSS+K +  +   STEAE
Sbjct: 241  LKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAE 300

Query: 1294 YKAIANLTAEM 1301
            Y   +    E+
Sbjct: 301  YITASETVMEI 308

BLAST of CmoCh03G008720 vs. Swiss-Prot
Match: YJ41B_YEAST (Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY4B-J PE=3 SV=3)

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-32
Identity = 162/639 (25.35%), Postives = 286/639 (44.76%), Query Frame = 1

Query: 786  NIASDNLSGVSLSSADNTRSS-------EEIAEYEAESSSINAQNQTHEHVSDQPTEAAS 845
            N+ +DN + VS     N  +S        + A    E SS+N + +   H  D+     S
Sbjct: 1181 NVPTDNGTNVSPRLEQNIEASGSPVQTVNKSAFLNKEFSSLNMKRKRKRH--DKNNSLTS 1240

Query: 846  QHPMRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPII------ETATEPRNLQE 905
                R + R+   + K   D             +  T++ P I      E  ++  +L+E
Sbjct: 1241 YELERDKKRSKKNRVKLIPD-------------NMETVSAPKIRAIYYNEAISKNPDLKE 1300

Query: 906  AMQHPRWRGAMNDELSALKRNATWDLVPPK-----PGINLIDSKWVYKVKRKADGSVERL 965
              ++ +   A + EL  LK    +D+         P   ++ +  ++  KR         
Sbjct: 1301 KHEYKQ---AYHKELQNLKDMKVFDVDVKYSRSEIPDNLIVPTNTIFTKKRNGI-----Y 1360

Query: 966  KARLVAKGFKQRFGVDYTDTFSPVIKPST----IRVILSLAVTKGWNMRQVDIQNAFLHG 1025
            KAR+V +G  Q       DT+S +   S     I++ L +A  +   M+ +DI +AFL+ 
Sbjct: 1361 KARIVCRGDTQS-----PDTYSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYA 1420

Query: 1026 ILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVAD 1085
             L+EE+Y+  P         +  + KL KALYGLKQ+PK W+  L   L  +G K +   
Sbjct: 1421 KLEEEIYIPHP-------HDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYT 1480

Query: 1086 SSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGL------EYF 1145
              L+  +++ + I   +YVDD +I +S++Q  +  I KLK +F +K  G L         
Sbjct: 1481 PGLYQTEDKNLMI--AVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDI 1540

Query: 1146 LGIEV--KKTRDGIILSQRRYALDLLKRVNME--KCKPMSTPMGSAEKLFREQGIPLSAE 1205
            LG+++   K    I L+ + +   + K+ N E  K +  S P  S  K+  ++ +   +E
Sbjct: 1541 LGMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSE 1600

Query: 1206 EQF-----KYRSTVGALQYLT-MTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGT 1265
            E+F     K +  +G L Y+    R D+ FAV KV + ++ P +  +  + +I++Y+   
Sbjct: 1601 EEFRQGVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKIIQYLVRY 1660

Query: 1266 LALGVKIQKST---MMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRS 1325
              +G+   +       +   +DA   G   D +S  G  ++ G N+ +  S K      S
Sbjct: 1661 KDIGIHYDRDCNKDKKVIAITDAS-VGSEYDAQSRIGVILWYGMNIFNVYSNKSTNRCVS 1720

Query: 1326 STEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIE 1384
            STEAE  AI    A+   +K  LKELG   +    +  D+  A    +      + K   
Sbjct: 1721 STEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPKEKFTW 1780

BLAST of CmoCh03G008720 vs. TrEMBL
Match: Q75LJ1_ORYSJ (Putative copia-like retrotransposon protein OS=Oryza sativa subsp. japonica GN=OSJNBa0096I06.16 PE=4 SV=1)

HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 674/1425 (47.30%), Postives = 930/1425 (65.26%), Query Frame = 1

Query: 2    SIPNNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEP 61
            S  +   ++P     +S KLT+ NY LWS Q+L  +R   L G + G+  APS  I    
Sbjct: 4    SSSSTASTNPLFGVQVSEKLTKGNYALWSAQVLAAIRGARLDGHITGATAAPSMEIEKTA 63

Query: 62   SEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS 121
            S++T  +  I+NP +  W+  DQ VL  + S+++ ++L+ +   +TA +AW  +   F +
Sbjct: 64   SDKTTEK--IVNPAYQEWFASDQQVLGFLLSTLSRDILTQVATASTAAQAWQQVCAMFTA 123

Query: 122  TSRARAMQIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPD 181
             ++AR++ +R+ L+  QK +M+I++Y  K+K L D +A+ GK +++E+L+AY+L GL  D
Sbjct: 124  QTKARSLNVRLTLTNTQKGNMSISEYCGKMKALADEIASSGKPLDEEDLVAYVLNGLDDD 183

Query: 182  YDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGRG 241
            ++P+V++I  R +  T+++VY+ +L++E R        Q  ++ N   +     A     
Sbjct: 184  FEPVVSAIVARNESTTMAEVYSQLLNFENRQ----ALRQAHASANAAVVVFSVVAAAAVA 243

Query: 242  SRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQA 301
              G +  L    G +   +              G+              CWHR+D+ Y  
Sbjct: 244  HVGAAILLLQDVGAALEEIR------------LGV--------------CWHRYDETYVP 303

Query: 302  ENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSIS 361
            +   +++A A + Y  DTNWY+DTGATDHITN+L++L  RE+Y G D+I  A+GAG+ I 
Sbjct: 304  D---ERSAAAAAAYGIDTNWYLDTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIK 363

Query: 362  HIGNSLISGSS--LVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYFLVKDRVTKKL 421
            HIG+S+I   +  L LK+IL+VP+  K+LIS  RLA DN A +E H NYFL+KDR T+  
Sbjct: 364  HIGDSVIHTPTRELHLKNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRATRNT 423

Query: 422  LLHGRCKNGLYVLPHNFSQALLTAKL-SKEQWHRRLGHPASPITIRILQDNNLAIDTNIP 481
            +L GRC+  LY LP + ++ +  A   S  +WH RLGHPA PI  R+L  NNL   T   
Sbjct: 424  ILKGRCRRRLYSLPTSPAKQVHAATTPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVAN 483

Query: 482  SSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRY 541
              SIC+ACQ GK+HQLP+  S  VS+ PL+LI ++VWGP+  SV   K+YVSF+DD+S++
Sbjct: 484  KDSICDACQKGKSHQLPYPKSSSVSSQPLELIFSNVWGPAPISVGGKKFYVSFIDDYSKF 543

Query: 542  VWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISC 601
             W+Y L+ KS+V   F +FQ  VE     KI +VQ+DWGGEY +L+ +F   GI HH+SC
Sbjct: 544  TWVYLLKHKSEVFQKFQEFQTLVERFFGHKILAVQTDWGGEYQKLNTFFAKIGISHHVSC 603

Query: 602  PHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPL 661
            P+ HQQNG  ERKHRH++E  L LLA A+MP+ +WDEA   A +LINR PS+ I    PL
Sbjct: 604  PYAHQQNGSAERKHRHLIEVALTLLAHASMPIKFWDEAVLAAAYLINRTPSKVINFACPL 663

Query: 662  HKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGR 721
             +LF + P+Y+ LR+FGCA WPNLRPYN  KL+FR+ RC+FLGYS+ HKG+KCL  +TGR
Sbjct: 664  EQLFKEKPNYTALRIFGCAVWPNLRPYNKHKLAFRSKRCVFLGYSNLHKGFKCLEIATGR 723

Query: 722  IYISRDVVFDENIFPFEE-----SKPPNKTTNPHHPVLLPALAKLASFYTENALTDIEPV 781
            +Y+SRDV FDE+IFPF E             +   P L+P L+ L      N + +  P 
Sbjct: 724  VYVSRDVTFDESIFPFSELHSNAGARLRAEISLLPPSLVPHLSSLGG-EQNNHVLNYPPN 783

Query: 782  VSNSHMNDGQTDNIASDNLS-GVSLSSADNTRSSEEIAEYEAESSSINAQNQTH------ 841
            V         TD    +N   G  + +     ++    E  A +++  AQ+  H      
Sbjct: 784  V---------TDQFGEENAEIGEEIVANGEENAAAAADENAAAAANGGAQDDVHGVAYDA 843

Query: 842  --EHVS----DQPTEAASQHPMRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPI 901
              EH S    D    AA QH    +   ++VQA   T      S TS   AS+  +   +
Sbjct: 844  SPEHSSPVTDDAMASAAEQHGNPIQ-EEHLVQASPQT-----ASSTSPSVASSAGVHDDV 903

Query: 902  I------------ETATEP--------------RNLQEAMQHPRWRGAMNDELSALKRNA 961
                         E A  P              ++L+EA+ +  W+ AM+ E  AL  N 
Sbjct: 904  TTDQSDQTDQAMPEAAVAPIRPKTRLQSGIRKEKSLEEAVNNKHWKEAMDAEYMALIENK 963

Query: 962  TWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKP 1021
            TW LVPP+ G N+ID KWVYKVKRKADGS++R KARLVAKGFKQR+G+DY DTFSPV+K 
Sbjct: 964  TWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKA 1023

Query: 1022 STIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKAL 1081
            +TIR++LSLAV++GW++RQ+D++NAFLHG+L+EEVYM+QPPG++  + P NY+CKL KAL
Sbjct: 1024 ATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMP-NYVCKLDKAL 1083

Query: 1082 YGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQA 1141
            YGLKQAP+AW+SRL+ KL ELGF  S AD+SLF  K  +++I++LIYVDDII+ SS   A
Sbjct: 1084 YGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVPDA 1143

Query: 1142 TERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMST 1201
            T  L+Q+L  DFA+KDLG L YFLGIEV K +DG++LSQ +YA DLL+RV M +CKP+ST
Sbjct: 1144 TSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVST 1203

Query: 1202 PMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHW 1261
            P+ ++EKL   +G  L  ++  +YRS VGALQYLT+TRPD++F++NKVCQ+LH PT  HW
Sbjct: 1204 PLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHW 1263

Query: 1262 GAVKRILRYVKGTLALGVKI-QKSTMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISW 1321
             AVKRILRYVK T+  G+K  +  ++++SGFSDADWAG PDDRRST GFAVFLG NL+SW
Sbjct: 1264 AAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSW 1323

Query: 1322 SSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSN 1379
            S+RKQATVSRSS EAEYKA+AN TAE++W+++LL+ELGV   +A +LWCDNLGA YL++N
Sbjct: 1324 SARKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSAN 1376

BLAST of CmoCh03G008720 vs. TrEMBL
Match: Q2QRW4_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g26180 PE=4 SV=1)

HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 686/1459 (47.02%), Postives = 929/1459 (63.67%), Query Frame = 1

Query: 2    SIPNNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEP 61
            S  +   ++P     IS KL + N+ LW  Q+   +R   L G + G+   P   IAV  
Sbjct: 3    SSSSTAATNPFQGHPISEKLGKANHALWKVQVSAAVRGARLQGHLTGATKRPPAEIAVT- 62

Query: 62   SEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS 121
              + G  K   NP    W   DQ VL  + SS+T EVL  +    TA E W  +E+ +++
Sbjct: 63   --KDGATKKEPNPAHEDWEATDQQVLGYLLSSLTREVLMQVATCDTAAEVWSAIEQMYST 122

Query: 122  TSRARAMQIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKR-IEDEELIAYMLQGLGP 181
             +RARA+  R  L+  +K +M+  +YF K+K LGD +A  G R I++EELI Y++ GLG 
Sbjct: 123  HTRARAINTRFALTNTKKGNMSTPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGE 182

Query: 182  DYDPLVTSITTRTDVYTVSDVYAHMLSYEMRH-LRKGTFEQLSSANNVNRISIRGGANGG 241
             Y  +V+++  R +  +VSD+Y+ +L++E R  + +G  E   +  N    S  GG    
Sbjct: 183  GYSEVVSAVCARVEPISVSDLYSQVLNFEARQAIYRGAQEVTVNVANRGGFS-HGGRGNS 242

Query: 242  RGSRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGI----VCQICGKPNHDALQCWHRF 301
             G +G SR    G G  R    N G    + ++  G+    +CQ+C K  H A  CW+R+
Sbjct: 243  NGGQGGSRGGGGGGGHGR---GNGGGGHGRGRTPGGVDKRPICQVCFKRGHTAADCWYRY 302

Query: 302  DQAYQAENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANG 361
            D+ Y  +     AA A + Y  DTNWY+DTGATDH+T +L++LT +E+Y G +QI  A+G
Sbjct: 303  DEDYVPDAK-HVAAAAVNSYGVDTNWYIDTGATDHVTGELDKLTMKEKYNGGEQIHTASG 362

Query: 362  AGLSISHIGNSLI---SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYFLVK 421
            AG+ ISHIG++++   +  ++ L+++LYVP+  K+L+SV RL +DN+A +E H +YF +K
Sbjct: 363  AGMDISHIGHAIVHNPNSRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFFLK 422

Query: 422  DRVTKKLLLHGRCKNGLYVLPHN-FSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNL 481
            D++T+K LL GR    LY LPH+   QA    KLS ++WH RLGHP+     +++   +L
Sbjct: 423  DQITRKTLLKGRSWRRLYPLPHSSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSL 482

Query: 482  AIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSF 541
               +++ S S+CNACQ  K+HQLPF  S  VS  PL+L+ +DVWGP+  SV   KYYVSF
Sbjct: 483  PC-SDLSSESVCNACQQAKSHQLPFPISSSVSKHPLELVFSDVWGPAPESVGRKKYYVSF 542

Query: 542  VDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTG 601
            +DDFS++ WIY ++ KS V   F +FQ  VE   + KI ++Q+DWGGEY  L+++F   G
Sbjct: 543  IDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIG 602

Query: 602  IEHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRT 661
            I HH+SCPHTHQQNG  ERKHRHIVE GL+LL+ A+MPL +WDEAF  A +LINR+PSR 
Sbjct: 603  IVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRV 662

Query: 662  IQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKC 721
            I   +PL KLF + PDYS LR+FGCACWPNLRPYNN KL FR+ RC+FLG+S+ HKG+KC
Sbjct: 663  IHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKC 722

Query: 722  LNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLASFYTENALTDIE 781
            L  STGRIYISRDVVFDENIFPF E           H      L       T   L  I 
Sbjct: 723  LEVSTGRIYISRDVVFDENIFPFTEL----------HANAGARLRSEIDILTPELLGPIR 782

Query: 782  PVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSSEEIAEYEAE--------SSSINAQN 841
             V +   M+    +N  S ++S    + A+       +   +AE         +S   + 
Sbjct: 783  SVGNEQCMH--PVNNPLSADVSAALSNRANEPHRDGAVHPADAEDPPATPPLDASSGPEP 842

Query: 842  QTHEHVSDQPTEAASQHPMRT---------------RLRNNIVQAKQFTDGTI----RYS 901
                H S   T ++ +HP  T                  +++ QA Q  +  +      S
Sbjct: 843  DRVVHHSPAAT-SSGRHPGPTPGSVPRGAASSLAEETAEDSVSQAVQEQESQVVQEQEQS 902

Query: 902  ETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWR------------------------ 961
              +++ A AVT  T  ++ A       EA   PR R                        
Sbjct: 903  SPAQEHAQAVTDETNTLQHADVTDTGSEAPAGPRTRLQSGVRKEKVYTDGTIKYKHSWFT 962

Query: 962  --GAMNDELSALKRNATWDLVPPKPGINLIDS-----------------KWVYKVKRKAD 1021
              G   ++L ALK +  W L        L+ +                 KWVYK+KRKAD
Sbjct: 963  ASGEPTNDLEALK-DKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKAD 1022

Query: 1022 GSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFL 1081
            G+++R KARLVAKGFKQR+G+DY DTFSPV+K +TIR+ILSLAV+KGW++RQ+D+QNAFL
Sbjct: 1023 GTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFL 1082

Query: 1082 HGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASV 1141
            HG L+EEVYM QPPGF+D  KP +++CKL KALYGLKQAP+AW SRL+ KL++LGFK S 
Sbjct: 1083 HGYLEEEVYMLQPPGFEDPTKP-HHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSK 1142

Query: 1142 ADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIE 1201
             D+SLF L   +IT+++L+YVDDII+ SSS++AT  L+Q LK +FA+KDLG L YFLGIE
Sbjct: 1143 PDTSLFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIE 1202

Query: 1202 VKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRST 1261
            V K ++GI+L+Q +YA DLLK+V M  CKP +TP+  +EKL   +G  L  E+   YRS 
Sbjct: 1203 VSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSV 1262

Query: 1262 VGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMM 1321
            VGALQYLT+TRPD+AF+VNKVCQ+LH PT  HW AVKRILRY+K    LG++I KS + +
Sbjct: 1263 VGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTL 1322

Query: 1322 LSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEM 1380
            +SGFSDADWAGC DDRRST GFA+FLG+NL+SW++RKQATVSRSSTE+EYKAIAN TAE+
Sbjct: 1323 VSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEI 1382

BLAST of CmoCh03G008720 vs. TrEMBL
Match: A5BFR8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012106 PE=4 SV=1)

HSP 1 Score: 1061.2 bits (2743), Expect = 1.2e-306
Identity = 589/1428 (41.25%), Postives = 854/1428 (59.80%), Query Frame = 1

Query: 2    SIPNNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEP 61
            SIP+  M    ++  + VKL + NY+LW +QI   + +     F+DG+   P + ++   
Sbjct: 25   SIPSYQM----LNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEKDLSPG- 84

Query: 62   SEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS 121
                     ++NP F  W  QD+ +LS I SS+T  +++ ++G  T+  AW  LE  F+S
Sbjct: 85   ---------VMNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSS 144

Query: 122  TSRARAMQIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPD 181
            +SRAR MQ+R+EL + +K  M++ DY  K+K   D LAAIG+ + +++ +  +L GLG D
Sbjct: 145  SSRARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSD 204

Query: 182  YDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGA---NG 241
            Y+ +VT+I  R D  ++  +++ +L++E R  ++ + EQ+S AN  +  + RGG    NG
Sbjct: 205  YNAVVTAINIRDDKISLEAIHSMLLAFEHRLEQQSSIEQMS-ANYASSSNNRGGGRKFNG 264

Query: 242  GRGS-----------RGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHD 301
            GRG            RGR R     +GQ  R  ++P  +P          CQ+CGK  H 
Sbjct: 265  GRGQGYSPNNNNYTYRGRGR--GGRNGQGGRQNSSPSEKPQ---------CQLCGKFGHT 324

Query: 302  ALQCWHRFDQAYQA-------------ENNLKQAALATSGYTSDTNWYVDTGATDHITND 361
            A  C+HRFD ++Q              +NN+     + S   +D +WY+D+GA+ H+T +
Sbjct: 325  AQICYHRFDISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADESWYLDSGASHHLTQN 384

Query: 362  LERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGS--SLVLKHILYVPKINKHLISVQ 421
            L  LT+   YTGTD++ + NG  LSIS+IG+  +     S  LK + +VP I+ +LISV 
Sbjct: 385  LGNLTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRLKKVFHVPFISANLISVA 444

Query: 422  RLASDNNAVVEFHPNYFLVKDRVTKKLLLHGRCKNGLYVLP-----------HN----FS 481
            +  S+NNA++EFH N F VKD  TK +L  G+ +NGLY  P           +N     S
Sbjct: 445  KFCSENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPVFSNLKPYSSINNASAFHS 504

Query: 482  QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFG 541
            Q   T +   E WH RLGH +  I  +++   N+A  +    S +C+ CQL K+H+LP  
Sbjct: 505  QFSSTVENKAELWHNRLGHASFDIVSKVMNTCNVA--SGKYKSFVCSDCQLAKSHRLPTQ 564

Query: 542  SSQHVSTAPLQLIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQ 601
             S   ++ PL+L++TD+WGP SI S + ++Y++ FVDD+SRY W Y L+ K     +F  
Sbjct: 565  LSNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIFKX 624

Query: 602  FQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIV 661
            F+  +E   +TKI+ +QSD GGE+    ++ ++ GI H  SCP+   QNG VERKHRH+V
Sbjct: 625  FKLQMENQFDTKIKCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYNSXQNGRVERKHRHVV 684

Query: 662  ETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGC 721
            ETGLALL+ A++P+ YW  AF T  FLINRMPS+ ++ D+P   LF + PDY   RVFGC
Sbjct: 685  ETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFRRHPDYKSFRVFGC 744

Query: 722  ACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEE 781
             C+P +RPYN  KL +R+ +C+FLGYS +HKG+ CL+ +TGR+YI+  VVFDE+ FP  +
Sbjct: 745  LCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFPLAQ 804

Query: 782  SKPPNKTTNPHHPVLLPALAKLASFYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVS 841
            SK  + + +       PAL    SF        + P    SH +        S++    +
Sbjct: 805  SKSSSSSNDTSAEGSTPALITPPSF------PCLLPDSKISHASIDSHSLSTSESPIPTT 864

Query: 842  LSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQF 901
             SS  +T SS    +   +S               +P   A    M TR    I + K  
Sbjct: 865  SSSPLDTSSSSPAIDLSPKS-------------VPEPQITALAPRMTTRSMRGITKKKTI 924

Query: 902  TDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATW 961
             D             SA+ +        +EP  L++A + P W  AM  E++AL RN TW
Sbjct: 925  LDL------------SAIKV--------SEPSTLKQAFKDPNWTKAMEMEIAALHRNHTW 984

Query: 962  DLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPST 1021
            DLV   P +N+I  KWVYK+K K DGS+ER KARLVAKG+ Q  G+DY +TFSPV+K +T
Sbjct: 985  DLVEQPPNVNVIGCKWVYKLKHKPDGSIERYKARLVAKGYNQTHGLDYFETFSPVVKAAT 1044

Query: 1022 IRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYG 1081
            IR+IL++A++  W +RQ+D+ NAFL+G L+E+VYM QPPG+ D   P N +C+LKKALYG
Sbjct: 1045 IRIILTVALSFKWEIRQLDVHNAFLNGELEEQVYMSQPPGYFDPQFP-NRVCRLKKALYG 1104

Query: 1082 LKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATE 1141
            LKQAP+AW  RL+  L++ GF  S  DSS+F+   +  T+ +L+YVDDI++  SS     
Sbjct: 1105 LKQAPRAWFQRLSSALLQWGFSMSRTDSSMFLHFGKATTLIVLVYVDDILVTGSSSTQIS 1164

Query: 1142 RLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPM 1201
             LI KL   FA++DLG L +FLGIEV      + LSQ +Y  DLL R  +   KP +TP 
Sbjct: 1165 SLIAKLDSVFALRDLGQLSFFLGIEVSYNEGSMTLSQTKYISDLLHRTELFDTKPANTPG 1224

Query: 1202 GSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGA 1261
               + L +  G P++  +   YRS VGALQY+T+TRPD+AFAVNK CQ++  PT AHW +
Sbjct: 1225 AVGKNLSKFDGDPMT--DVTHYRSVVGALQYVTLTRPDIAFAVNKACQFMQQPTTAHWLS 1284

Query: 1262 VKRILRYVKGTLALGVKIQ-KSTMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSS 1321
            VKRILRY++GT+  G+     S + + GF+DADW    DDRRS+SG+ V+LG NL+SWSS
Sbjct: 1285 VKRILRYLRGTMQDGLLFSPSSNLTIEGFTDADWGAHLDDRRSSSGYLVYLGGNLVSWSS 1344

Query: 1322 RKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPV 1381
             KQ  VSRSS E+EY+ +   TAE++W+++LL+EL V     P LW DN+ A ++  NPV
Sbjct: 1345 TKQKVVSRSSAESEYRGLVFATAEIVWMQALLQELCVPIPAIPLLWYDNISAYHMAKNPV 1382

Query: 1382 FHARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPF 1384
            FHARTKHIE+D HF+R+QV R  ++++F+ + +Q  D+LTK L+ + F
Sbjct: 1405 FHARTKHIEIDLHFIRDQVMRGKIQLQFVPTEEQPVDLLTKHLTSSRF 1382

BLAST of CmoCh03G008720 vs. TrEMBL
Match: A5BQ73_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039158 PE=4 SV=1)

HSP 1 Score: 1028.5 bits (2658), Expect = 8.8e-297
Identity = 587/1422 (41.28%), Postives = 843/1422 (59.28%), Query Frame = 1

Query: 2    SIPNNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEP 61
            SIP+  M + S+     VKL + NY+LW +QI   + +     F+DG+   P + +   P
Sbjct: 22   SIPSYQMLNYSLP----VKLDRTNYILWRSQIDNVIFANGFEDFIDGTSVCPEKEL--RP 81

Query: 62   SEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS 121
             E        INP F     QD+ +LS I SS+T  +++ ++G  ++  AW  LE+ F+S
Sbjct: 82   GE--------INPAFVAXRRQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSS 141

Query: 122  TSRARAMQIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPD 181
             SRAR MQ+ +E  + +K  M++ DY  KVK   D+LAAIG+ + +++ I  +L GLG D
Sbjct: 142  CSRARIMQLXLEFQSTKKGSMSMIDYIMKVKGAADSLAAIGEPVSEQDQIMNLLGGLGSD 201

Query: 182  YDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLS--SANNVNRISIRGGA--- 241
            Y+ +VT+I  R D  ++  V++ +L++E R  ++G+ EQL   SAN  +  + RGG    
Sbjct: 202  YNAVVTAINIREDKISLEAVHSMLLAFEQRLEQQGSIEQLPAMSANYASXSNNRGGGRKY 261

Query: 242  NGGRGSRGRSRQLN-SGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRF 301
            NGGRG        N  G G+  R     GRQ S   SS    CQ+CGK  H    C+HRF
Sbjct: 262  NGGRGPNFMMTNSNFRGRGRGXR-YGQSGRQNSS--SSERPQCQLCGKFGHTVQVCYHRF 321

Query: 302  DQAYQA------------ENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRER 361
            D  +Q+             +N   A +A S   +D NWY+D+GA+ H+T ++  LT    
Sbjct: 322  DITFQSTQNNTTGVSNSGNSNXMPAMVAXSNNXADDNWYLDSGASHHLTQNVANLTNATP 381

Query: 362  YTGTDQIQVANGAGLSISHIGNSLISGS--SLVLKHILYVPKINKHLISVQRLASDNNAV 421
            YTG D++ + NG  L+IS+   + +  +  S  LK + +VP I+ +LISV +  SDNNA+
Sbjct: 382  YTGADKVTIGNGKHLTISNTXFTRLFSNPHSFQLKKVFHVPFISANLISVAKFCSDNNAL 441

Query: 422  VEFHPNYFLVKDRVTKKLLLHGRCKNGLYVLP--HNFSQALL-----------TAKLSKE 481
            +EFH N F +KD  TK++L  G+ +NGLY  P   N   A +             +  +E
Sbjct: 442  IEFHSNGFFLKDLHTKRVLAQGKLENGLYKFPVISNKKTAYVGITNDSTFQCSNIENKRE 501

Query: 482  QWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQ 541
             WH RLGH A+ I  RI+ + N++       +++C++CQL K+H+LP   S   ++ PL+
Sbjct: 502  LWHHRLGHAATDIVTRIMHNCNVSCGKY--KATVCSSCQLAKSHRLPTHLSSFHASKPLE 561

Query: 542  LIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNT 601
            L++TD+WGP S+ S + +KY++ FVDD+SRY W+Y L+ K     +F  F+  VE     
Sbjct: 562  LVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEA 621

Query: 602  KIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQAN 661
            KI+ +Q D GGE+    ++ + +GI H  SCP+   QNG VERKHRH+VETGLALLA A 
Sbjct: 622  KIKCLQXDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAG 681

Query: 662  MPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNN 721
            +PL +W  AF TA FLINRMPS+ +   +P   LF ++PDY  LRVFGC C+P +RPYNN
Sbjct: 682  LPLKFWSYAFQTATFLINRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNN 741

Query: 722  KKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPH 781
             KL +R+ +C+FLGYS  HKGY CL+  TGR+Y+S  VVFDE  FPF ++   + + +  
Sbjct: 742  HKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISSSPSKDAS 801

Query: 782  HPVLLPALAKLASFYTENALTDIEPVVSNSHMNDGQTDNIASDNLSG-----VSLSSADN 841
               ++P +           +    P   + H   G   ++AS NL+       S +    
Sbjct: 802  DESIIPXI-----------IVSSNPSTLSFH---GSNHSMASPNLTSTLTHPTSPTDTPT 861

Query: 842  TRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQFTDGTIR 901
            TR S E    EAE   + AQ Q    V   P        + TR  + I + K        
Sbjct: 862  TRXSRE-PVLEAE-VXLPAQQQV---VVPPPR-------VTTRSMSGITKRK-------- 921

Query: 902  YSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPK 961
                         I        +EP  L++A++ P W  AM+ E++AL +N TWDLV P 
Sbjct: 922  ------------PIFNLAASKISEPTTLKQAIKDPNWAEAMHTEIAALHKNQTWDLVDPP 981

Query: 962  PGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILS 1021
              +N+I  KWVYK+K K DGSV+R KARLVA+GF Q FG+DY +TFSPV+K +TIR++L+
Sbjct: 982  KDVNIIGCKWVYKLKYKXDGSVDRYKARLVARGFNQTFGLDYFETFSPVVKAATIRIVLT 1041

Query: 1022 LAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPK 1081
            + ++  W +RQ+D             VYM QPPGF     P N +CKLKKALYGLKQ+P+
Sbjct: 1042 IXLSYRWELRQLD-------------VYMAQPPGFLHPNHP-NKVCKLKKALYGLKQSPR 1101

Query: 1082 AWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKL 1141
            AW ++L+  L+  GF +S  DSS+F+   R  T+ +L+YVDDII+  SS    ++LI KL
Sbjct: 1102 AWFTKLSSALLSXGFNSSRTDSSMFVHFGRHSTLIVLVYVDDIIVTGSSPILIQQLIHKL 1161

Query: 1142 KIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKL 1201
               FA++DLG L YFLGIEV      + LSQR+Y  DLL+R +M   K  +TP      L
Sbjct: 1162 HSLFALRDLGQLSYFLGIEVTYDGGSLHLSQRKYITDLLQRTSMLDSKAAATPGTVGLSL 1221

Query: 1202 FREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILR 1261
             +  G  +  ++   YRS VGALQY T+TRPD+AF++NK CQ++H PT  HW +VKRILR
Sbjct: 1222 SQFDGDLM--DDVTMYRSVVGALQYATLTRPDIAFSINKACQFMHRPTSTHWSSVKRILR 1281

Query: 1262 YVKGTLALGVKIQKST-MMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATV 1321
            Y+KGT+  G+ +Q S    +  ++DADW   PDDRRS+SG+ V+LG NL+SW++ KQ  V
Sbjct: 1282 YLKGTITHGLLLQPSAHFTIQAYTDADWGAQPDDRRSSSGYLVYLGNNLVSWTASKQKVV 1341

Query: 1322 SRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTK 1381
            SRSS E+EY+ +A  TAE+IW ++LL+EL +  +  P L+ DN+ A Y+  NPVFHARTK
Sbjct: 1342 SRSSAESEYRGLAIATAEIIWTQALLRELCISITSIPTLYYDNISAYYMAKNPVFHARTK 1362

Query: 1382 HIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPF 1384
            HIE+D HF+R+QV    +++++I S+DQ ADILTK L+ + F
Sbjct: 1402 HIEIDLHFIRDQVLHNKLQLQYIPSTDQPADILTKHLTSSRF 1362

BLAST of CmoCh03G008720 vs. TrEMBL
Match: A0A151U9E7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan GN=KK1_020152 PE=4 SV=1)

HSP 1 Score: 1011.9 bits (2615), Expect = 8.6e-292
Identity = 581/1443 (40.26%), Postives = 836/1443 (57.93%), Query Frame = 1

Query: 12   SISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKII 71
            + S  IS KL+++N+L W  Q    +R   L   + G+M  P+Q        +    K +
Sbjct: 15   AFSNPISSKLSEDNFLTWRQQAESTIRGYRLKKHILGAMHVPAQH-----KTDEDKAKGV 74

Query: 72   INPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAMQIR 131
            ++PE+  +  QD L+ S +  S+  +    MVG     + W  LE  FAS ++AR  Q++
Sbjct: 75   LSPEYEDYDQQDNLLKSWLLESMEPQFKVRMVGYEWCHQIWNNLEIYFASQTKARVKQLK 134

Query: 132  MELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITT 191
            ++L  I KK   I  Y  ++K + + LAAIG  +   E I  +  GL  +YDP +TS+ T
Sbjct: 135  IQLRGI-KKTTAINQYLLEIKKIVNNLAAIGSPLNTAEHIDAIFDGLSEEYDPFITSVLT 194

Query: 192  RTDVYTVSDVYAHMLSYEMRHLRKGTFEQL--------SSANNVNRISIRGGANGGRGSR 251
            RT+ Y+V  + + +++ E R  +    E +         S N+  + + +G  +   G+ 
Sbjct: 195  RTEEYSVEQIESLLMAQEERLEKHKASESVPLQANLAQGSFNSRKQFTNQGRGSNNNGTH 254

Query: 252  GRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAEN 311
            GR      G G+S +      +QP          CQ+CGK  H A  CWHR+DQ Y   N
Sbjct: 255  GRGPHRGRGRGRSAQHFGRGNKQP----------CQVCGKIGHIAFHCWHRYDQQYTEPN 314

Query: 312  -----------NLKQAALATSGYTS---DTNWYVDTGATDHITNDLERLTTRERYTGTDQ 371
                       N +Q     +G  +   D  WY D+GAT+H+T+DL  L ++  YTG D+
Sbjct: 315  LNHNTNVYNPGNQQQMQAMIAGSQNMVYDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDK 374

Query: 372  IQVANGAGLSISHIGNSL----ISGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFH 431
            I + NG  + I+H G S     +S     LK +L+VP I K+L+SV +   DNN  VEFH
Sbjct: 375  IHMGNGQAIGINHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFH 434

Query: 432  PNYFLVKDRVTKKLLLHGRCKNGLYV------------------LPHNFSQALLT-AKLS 491
             NY LVK + +K+ LL G  KNGLYV                  +P N +   +   + S
Sbjct: 435  TNYCLVKSQDSKETLLRGNLKNGLYVFDEVQILKPDVYEHTVDSVPTNRTTLYVQRTRKS 494

Query: 492  KEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAP 551
             + WH RL H +  I   +++  N+ +  N   S +C +C +GK+H LPF  S  V  +P
Sbjct: 495  YDVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNSP 554

Query: 552  LQLIHTDVWGPS-IASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETML 611
            L+L+++DVWGPS  AS    +YYV F D FS+Y WIYF+  KS+    F+ F+  VE   
Sbjct: 555  LELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQF 614

Query: 612  NTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQ 671
              KI+  QSD G E+  L   F   GI H +SCPH+HQQNG  ERKHRHI E GL LL+ 
Sbjct: 615  GHKIKMFQSDGGKEFTCLTKLFNENGITHRLSCPHSHQQNGTAERKHRHITEVGLTLLSS 674

Query: 672  ANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPY 731
            + +P  +W +AF+TA  +INR+P+  +   +P   LF K PDY +LR FGCAC+P+LRP+
Sbjct: 675  SGLPHIFWSDAFSTAIHVINRLPTPILGHKSPYEVLFNKIPDYLLLRPFGCACYPHLRPF 734

Query: 732  NNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKT-- 791
            N+ K+ FR+++C+F+GYS  HKGYKC   + G+I ISR+VVFDE+ FP       N    
Sbjct: 735  NSHKMDFRSSQCVFIGYSMQHKGYKCFT-TNGKIIISRNVVFDEDTFPGPSYFNTNNVAG 794

Query: 792  -TNPHHPVLLPALAKLAS-FYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSAD 851
             ++ H P  +P++  L S     N+ T + P+VS+        +++    L+  + +S D
Sbjct: 795  LSSSHSPQPVPSIHVLPSQSLAPNSATTV-PLVSSI------DESLQDSQLTSTTDTSQD 854

Query: 852  NTRSSEEIAEYEAESSSINAQN--QTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQFTDG 911
            N  +S         SS  N Q    T    +   T   +QHPM TR +  + + K F   
Sbjct: 855  NLITS---------SSQPNPQPIITTVPDPASPATRTTNQHPMITRAKIGVFKPKAFL-- 914

Query: 912  TIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLV 971
                                     +EP ++ +A+ +  W+ AM DE +AL +N TWDLV
Sbjct: 915  -----------------------ATSEPISVAQALDNKHWKQAMQDEYNALLKNHTWDLV 974

Query: 972  PPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRV 1031
               PG   I  KW++K K K DGS+ R KARLVA+GF Q+ G+DYTDTFSPV+KP +IR+
Sbjct: 975  SLPPGRTAITCKWIFKNKYKQDGSILRHKARLVARGFSQQQGLDYTDTFSPVVKPVSIRI 1034

Query: 1032 ILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQ 1091
            +L+LAV+KGW + Q+D+ NAFL+G LKE++YM QP GF + A   N +CKL+KALYGLKQ
Sbjct: 1035 VLALAVSKGWPIHQIDVDNAFLNGDLKEDIYMLQPQGFHNGA--PNTVCKLRKALYGLKQ 1094

Query: 1092 APKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLI 1151
            AP+AW  +LT  L++LGFK + +DSSLF   ++  +IY+LIYVDDIII S+S  A + LI
Sbjct: 1095 APRAWFQKLTLILLQLGFKQARSDSSLFTFTSKVTSIYILIYVDDIIITSNSPAAIQTLI 1154

Query: 1152 QKLKIDFAVKDLGGLEYFLGIEVKKT-RDGIILSQRRYALDLLKRVNMEKCKPMSTPMGS 1211
              L   F +KDLG L YFLGIEV      GI LSQ +Y  D+L ++NM   KP+ TPM  
Sbjct: 1155 STLHRFFPLKDLGSLHYFLGIEVNSDGAGGIHLSQTKYLKDILDKLNMSNAKPVKTPMAP 1214

Query: 1212 AEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVK 1271
            + KL  + G  +  +    YRS +GALQYLT+TRPD+A+ VNK+CQ++H P ++HW AVK
Sbjct: 1215 SLKLTND-GTAVCPDPSL-YRSVIGALQYLTITRPDIAYTVNKLCQFMHHPLESHWKAVK 1274

Query: 1272 RILRYVKGTLALGVKIQKST-MMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRK 1331
            R+LRY++GTL  G+  +KST   +  + D+DWA   +D RSTSG  V+LG N++SW ++K
Sbjct: 1275 RLLRYLQGTLQHGLHYKKSTDTGIHAYCDSDWASDHEDMRSTSGNCVYLGPNIVSWMAKK 1334

Query: 1332 QATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFH 1391
            Q  VSRSSTEAE++++A+L  E+ +I++LL EL    ++ P +WCDN GA  L++NPV H
Sbjct: 1335 QRVVSRSSTEAEFRSLASLVTEVQYIQNLLSELHNSSTQPPLIWCDNQGAVLLSANPVLH 1394

Query: 1392 ARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHFLHKLDTIYAT 1401
             +TKH E+D  FVRE+VAR  ++V+ I +  QVAD+LTK  S + F     HKL     +
Sbjct: 1395 TKTKHFELDLWFVRERVARGQIQVKHIPARFQVADLLTKAPSSSIFLA-LRHKLTVDKQS 1394

BLAST of CmoCh03G008720 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 408.3 bits (1048), Expect = 2.2e-113
Identity = 212/482 (43.98%), Postives = 305/482 (63.28%), Query Frame = 1

Query: 881  IETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKA 940
            I  A EP    EA +   W GAM+DE+ A++   TW++    P    I  KWVYK+K  +
Sbjct: 80   IAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS 139

Query: 941  DGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAF 1000
            DG++ER KARLVAKG+ Q+ G+D+ +TFSPV K +++++IL+++    + + Q+DI NAF
Sbjct: 140  DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAF 199

Query: 1001 LHGILKEEVYMRQPPGF---QDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGF 1060
            L+G L EE+YM+ PPG+   Q  + P N +C LKK++YGLKQA + W  + +  LI  GF
Sbjct: 200  LNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGF 259

Query: 1061 KASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYF 1120
              S +D + F+     + + +L+YVDDIII S++D A + L  +LK  F ++DLG L+YF
Sbjct: 260  VQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 319

Query: 1121 LGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFK 1180
            LG+E+ ++  GI + QR+YALDLL    +  CKP S PM  +       G      +   
Sbjct: 320  LGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF--VDAKA 379

Query: 1181 YRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGV-KIQK 1240
            YR  +G L YL +TR D++FAVNK+ Q+   P  AH  AV +IL Y+KGT+  G+    +
Sbjct: 380  YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 439

Query: 1241 STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANL 1300
            + M L  FSDA +  C D RRST+G+ +FLG +LISW S+KQ  VS+SS EAEY+A++  
Sbjct: 440  AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFA 499

Query: 1301 TAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVAR 1359
            T EM+W+    +EL +  SK   L+CDN  A ++ +N VFH RTKHIE D H VRE+   
Sbjct: 500  TDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVY 559

BLAST of CmoCh03G008720 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 218.8 bits (556), Expect = 2.5e-56
Identity = 111/228 (48.68%), Postives = 152/228 (66.67%), Query Frame = 1

Query: 1076 IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRR 1135
            +Y+L+YVDDI++  SS+     LI +L   F++KDLG + YFLGI++K    G+ LSQ +
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 1136 YALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDL 1195
            YA  +L    M  CKPMSTP+                 +   +RS VGALQYLT+TRPD+
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLPLK---LNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDI 120

Query: 1196 AFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMM-LSGFSDADWAGCPD 1255
            ++AVN VCQ +H PT A +  +KR+LRYVKGT+  G+ I K++ + +  F D+DWAGC  
Sbjct: 121  SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 180

Query: 1256 DRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIW 1303
             RRST+GF  FLG N+ISWS+++Q TVSRSSTE EY+A+A   AE+ W
Sbjct: 181  TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmoCh03G008720 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 111.7 bits (278), Expect = 4.2e-24
Identity = 55/112 (49.11%), Postives = 80/112 (71.43%), Query Frame = 1

Query: 873 AVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKW 932
           ++TITT I +   EP+++  A++ P W  AM +EL AL RN TW LVPP    N++  KW
Sbjct: 17  SLTITTTIKK---EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKW 76

Query: 933 VYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLA 985
           V+K K  +DG+++RLKARLVAKGF Q  G+ + +T+SPV++ +TIR IL++A
Sbjct: 77  VFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

BLAST of CmoCh03G008720 vs. TAIR10
Match: ATMG00240.1 (ATMG00240.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-14
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 1

Query: 1187 YLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQ-KSTMMLSGFS 1246
            YLT+TRPDL FAVN++ Q+      A   AV ++L YVKGT+  G+     S + L  F+
Sbjct: 2    YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 1247 DADWAGCPDDRRSTSGFAV-----FLGA 1269
            D+DWA CPD RRS +GF       FLGA
Sbjct: 62   DSDWASCPDTRRSVTGFCSLVPLWFLGA 89

BLAST of CmoCh03G008720 vs. TAIR10
Match: AT1G34070.1 (AT1G34070.1 Retrotransposon gag protein (InterPro:IPR005162))

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-14
Identity = 66/261 (25.29%), Postives = 108/261 (41.38%), Query Frame = 1

Query: 17  ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEF 76
           + + + + NY  W    L +  S +++G +DG++                   +  N   
Sbjct: 22  VMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTL-------------------LPTNAND 81

Query: 77  TVWYPQDQLV-LSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAMQIRMELS 136
             W  +D +V LSL  +   ++   + V  +T+R+ W+ ++ QF +   ARA+++  EL 
Sbjct: 82  VNWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELR 141

Query: 137 TIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDV 196
           T    DM +ADY+RK+K L D+L  +   + D  L+ Y+L GL P +D ++  I  R   
Sbjct: 142 TKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPF 201

Query: 197 YTVSDVYAHMLSYEMR-------------HLRKGTFEQLSSANNVNRISIRGGANGGRGS 256
            +  D    +   E R             H    T    S A  V      GG   G   
Sbjct: 202 PSFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQRSGGNQMGYRG 261

Query: 257 RGRSRQLNSGHGQSRRTVNNP 264
           RGR   +  G G      N P
Sbjct: 262 RGRGNNIFRGRGGRFSYYNMP 263

BLAST of CmoCh03G008720 vs. NCBI nr
Match: gi|40714683|gb|AAR88589.1| (putative copia-like retrotransposon protein [Oryza sativa Japonica Group])

HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 674/1425 (47.30%), Postives = 930/1425 (65.26%), Query Frame = 1

Query: 2    SIPNNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEP 61
            S  +   ++P     +S KLT+ NY LWS Q+L  +R   L G + G+  APS  I    
Sbjct: 4    SSSSTASTNPLFGVQVSEKLTKGNYALWSAQVLAAIRGARLDGHITGATAAPSMEIEKTA 63

Query: 62   SEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS 121
            S++T  +  I+NP +  W+  DQ VL  + S+++ ++L+ +   +TA +AW  +   F +
Sbjct: 64   SDKTTEK--IVNPAYQEWFASDQQVLGFLLSTLSRDILTQVATASTAAQAWQQVCAMFTA 123

Query: 122  TSRARAMQIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPD 181
             ++AR++ +R+ L+  QK +M+I++Y  K+K L D +A+ GK +++E+L+AY+L GL  D
Sbjct: 124  QTKARSLNVRLTLTNTQKGNMSISEYCGKMKALADEIASSGKPLDEEDLVAYVLNGLDDD 183

Query: 182  YDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGRG 241
            ++P+V++I  R +  T+++VY+ +L++E R        Q  ++ N   +     A     
Sbjct: 184  FEPVVSAIVARNESTTMAEVYSQLLNFENRQ----ALRQAHASANAAVVVFSVVAAAAVA 243

Query: 242  SRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQA 301
              G +  L    G +   +              G+              CWHR+D+ Y  
Sbjct: 244  HVGAAILLLQDVGAALEEIR------------LGV--------------CWHRYDETYVP 303

Query: 302  ENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSIS 361
            +   +++A A + Y  DTNWY+DTGATDHITN+L++L  RE+Y G D+I  A+GAG+ I 
Sbjct: 304  D---ERSAAAAAAYGIDTNWYLDTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIK 363

Query: 362  HIGNSLISGSS--LVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYFLVKDRVTKKL 421
            HIG+S+I   +  L LK+IL+VP+  K+LIS  RLA DN A +E H NYFL+KDR T+  
Sbjct: 364  HIGDSVIHTPTRELHLKNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRATRNT 423

Query: 422  LLHGRCKNGLYVLPHNFSQALLTAKL-SKEQWHRRLGHPASPITIRILQDNNLAIDTNIP 481
            +L GRC+  LY LP + ++ +  A   S  +WH RLGHPA PI  R+L  NNL   T   
Sbjct: 424  ILKGRCRRRLYSLPTSPAKQVHAATTPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVAN 483

Query: 482  SSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRY 541
              SIC+ACQ GK+HQLP+  S  VS+ PL+LI ++VWGP+  SV   K+YVSF+DD+S++
Sbjct: 484  KDSICDACQKGKSHQLPYPKSSSVSSQPLELIFSNVWGPAPISVGGKKFYVSFIDDYSKF 543

Query: 542  VWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISC 601
             W+Y L+ KS+V   F +FQ  VE     KI +VQ+DWGGEY +L+ +F   GI HH+SC
Sbjct: 544  TWVYLLKHKSEVFQKFQEFQTLVERFFGHKILAVQTDWGGEYQKLNTFFAKIGISHHVSC 603

Query: 602  PHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPL 661
            P+ HQQNG  ERKHRH++E  L LLA A+MP+ +WDEA   A +LINR PS+ I    PL
Sbjct: 604  PYAHQQNGSAERKHRHLIEVALTLLAHASMPIKFWDEAVLAAAYLINRTPSKVINFACPL 663

Query: 662  HKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGR 721
             +LF + P+Y+ LR+FGCA WPNLRPYN  KL+FR+ RC+FLGYS+ HKG+KCL  +TGR
Sbjct: 664  EQLFKEKPNYTALRIFGCAVWPNLRPYNKHKLAFRSKRCVFLGYSNLHKGFKCLEIATGR 723

Query: 722  IYISRDVVFDENIFPFEE-----SKPPNKTTNPHHPVLLPALAKLASFYTENALTDIEPV 781
            +Y+SRDV FDE+IFPF E             +   P L+P L+ L      N + +  P 
Sbjct: 724  VYVSRDVTFDESIFPFSELHSNAGARLRAEISLLPPSLVPHLSSLGG-EQNNHVLNYPPN 783

Query: 782  VSNSHMNDGQTDNIASDNLS-GVSLSSADNTRSSEEIAEYEAESSSINAQNQTH------ 841
            V         TD    +N   G  + +     ++    E  A +++  AQ+  H      
Sbjct: 784  V---------TDQFGEENAEIGEEIVANGEENAAAAADENAAAAANGGAQDDVHGVAYDA 843

Query: 842  --EHVS----DQPTEAASQHPMRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPI 901
              EH S    D    AA QH    +   ++VQA   T      S TS   AS+  +   +
Sbjct: 844  SPEHSSPVTDDAMASAAEQHGNPIQ-EEHLVQASPQT-----ASSTSPSVASSAGVHDDV 903

Query: 902  I------------ETATEP--------------RNLQEAMQHPRWRGAMNDELSALKRNA 961
                         E A  P              ++L+EA+ +  W+ AM+ E  AL  N 
Sbjct: 904  TTDQSDQTDQAMPEAAVAPIRPKTRLQSGIRKEKSLEEAVNNKHWKEAMDAEYMALIENK 963

Query: 962  TWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKP 1021
            TW LVPP+ G N+ID KWVYKVKRKADGS++R KARLVAKGFKQR+G+DY DTFSPV+K 
Sbjct: 964  TWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKA 1023

Query: 1022 STIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKAL 1081
            +TIR++LSLAV++GW++RQ+D++NAFLHG+L+EEVYM+QPPG++  + P NY+CKL KAL
Sbjct: 1024 ATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMP-NYVCKLDKAL 1083

Query: 1082 YGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQA 1141
            YGLKQAP+AW+SRL+ KL ELGF  S AD+SLF  K  +++I++LIYVDDII+ SS   A
Sbjct: 1084 YGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVPDA 1143

Query: 1142 TERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMST 1201
            T  L+Q+L  DFA+KDLG L YFLGIEV K +DG++LSQ +YA DLL+RV M +CKP+ST
Sbjct: 1144 TSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVST 1203

Query: 1202 PMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHW 1261
            P+ ++EKL   +G  L  ++  +YRS VGALQYLT+TRPD++F++NKVCQ+LH PT  HW
Sbjct: 1204 PLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHW 1263

Query: 1262 GAVKRILRYVKGTLALGVKI-QKSTMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISW 1321
             AVKRILRYVK T+  G+K  +  ++++SGFSDADWAG PDDRRST GFAVFLG NL+SW
Sbjct: 1264 AAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSW 1323

Query: 1322 SSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSN 1379
            S+RKQATVSRSS EAEYKA+AN TAE++W+++LL+ELGV   +A +LWCDNLGA YL++N
Sbjct: 1324 SARKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSAN 1376

BLAST of CmoCh03G008720 vs. NCBI nr
Match: gi|77555253|gb|ABA98049.1| (retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group])

HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 686/1459 (47.02%), Postives = 929/1459 (63.67%), Query Frame = 1

Query: 2    SIPNNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEP 61
            S  +   ++P     IS KL + N+ LW  Q+   +R   L G + G+   P   IAV  
Sbjct: 3    SSSSTAATNPFQGHPISEKLGKANHALWKVQVSAAVRGARLQGHLTGATKRPPAEIAVT- 62

Query: 62   SEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS 121
              + G  K   NP    W   DQ VL  + SS+T EVL  +    TA E W  +E+ +++
Sbjct: 63   --KDGATKKEPNPAHEDWEATDQQVLGYLLSSLTREVLMQVATCDTAAEVWSAIEQMYST 122

Query: 122  TSRARAMQIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKR-IEDEELIAYMLQGLGP 181
             +RARA+  R  L+  +K +M+  +YF K+K LGD +A  G R I++EELI Y++ GLG 
Sbjct: 123  HTRARAINTRFALTNTKKGNMSTPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGE 182

Query: 182  DYDPLVTSITTRTDVYTVSDVYAHMLSYEMRH-LRKGTFEQLSSANNVNRISIRGGANGG 241
             Y  +V+++  R +  +VSD+Y+ +L++E R  + +G  E   +  N    S  GG    
Sbjct: 183  GYSEVVSAVCARVEPISVSDLYSQVLNFEARQAIYRGAQEVTVNVANRGGFS-HGGRGNS 242

Query: 242  RGSRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGI----VCQICGKPNHDALQCWHRF 301
             G +G SR    G G  R    N G    + ++  G+    +CQ+C K  H A  CW+R+
Sbjct: 243  NGGQGGSRGGGGGGGHGR---GNGGGGHGRGRTPGGVDKRPICQVCFKRGHTAADCWYRY 302

Query: 302  DQAYQAENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANG 361
            D+ Y  +     AA A + Y  DTNWY+DTGATDH+T +L++LT +E+Y G +QI  A+G
Sbjct: 303  DEDYVPDAK-HVAAAAVNSYGVDTNWYIDTGATDHVTGELDKLTMKEKYNGGEQIHTASG 362

Query: 362  AGLSISHIGNSLI---SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYFLVK 421
            AG+ ISHIG++++   +  ++ L+++LYVP+  K+L+SV RL +DN+A +E H +YF +K
Sbjct: 363  AGMDISHIGHAIVHNPNSRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFFLK 422

Query: 422  DRVTKKLLLHGRCKNGLYVLPHN-FSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNL 481
            D++T+K LL GR    LY LPH+   QA    KLS ++WH RLGHP+     +++   +L
Sbjct: 423  DQITRKTLLKGRSWRRLYPLPHSSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSL 482

Query: 482  AIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSF 541
               +++ S S+CNACQ  K+HQLPF  S  VS  PL+L+ +DVWGP+  SV   KYYVSF
Sbjct: 483  PC-SDLSSESVCNACQQAKSHQLPFPISSSVSKHPLELVFSDVWGPAPESVGRKKYYVSF 542

Query: 542  VDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTG 601
            +DDFS++ WIY ++ KS V   F +FQ  VE   + KI ++Q+DWGGEY  L+++F   G
Sbjct: 543  IDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIG 602

Query: 602  IEHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRT 661
            I HH+SCPHTHQQNG  ERKHRHIVE GL+LL+ A+MPL +WDEAF  A +LINR+PSR 
Sbjct: 603  IVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRV 662

Query: 662  IQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKC 721
            I   +PL KLF + PDYS LR+FGCACWPNLRPYNN KL FR+ RC+FLG+S+ HKG+KC
Sbjct: 663  IHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKC 722

Query: 722  LNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLASFYTENALTDIE 781
            L  STGRIYISRDVVFDENIFPF E           H      L       T   L  I 
Sbjct: 723  LEVSTGRIYISRDVVFDENIFPFTEL----------HANAGARLRSEIDILTPELLGPIR 782

Query: 782  PVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSSEEIAEYEAE--------SSSINAQN 841
             V +   M+    +N  S ++S    + A+       +   +AE         +S   + 
Sbjct: 783  SVGNEQCMH--PVNNPLSADVSAALSNRANEPHRDGAVHPADAEDPPATPPLDASSGPEP 842

Query: 842  QTHEHVSDQPTEAASQHPMRT---------------RLRNNIVQAKQFTDGTI----RYS 901
                H S   T ++ +HP  T                  +++ QA Q  +  +      S
Sbjct: 843  DRVVHHSPAAT-SSGRHPGPTPGSVPRGAASSLAEETAEDSVSQAVQEQESQVVQEQEQS 902

Query: 902  ETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWR------------------------ 961
              +++ A AVT  T  ++ A       EA   PR R                        
Sbjct: 903  SPAQEHAQAVTDETNTLQHADVTDTGSEAPAGPRTRLQSGVRKEKVYTDGTIKYKHSWFT 962

Query: 962  --GAMNDELSALKRNATWDLVPPKPGINLIDS-----------------KWVYKVKRKAD 1021
              G   ++L ALK +  W L        L+ +                 KWVYK+KRKAD
Sbjct: 963  ASGEPTNDLEALK-DKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKAD 1022

Query: 1022 GSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFL 1081
            G+++R KARLVAKGFKQR+G+DY DTFSPV+K +TIR+ILSLAV+KGW++RQ+D+QNAFL
Sbjct: 1023 GTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFL 1082

Query: 1082 HGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASV 1141
            HG L+EEVYM QPPGF+D  KP +++CKL KALYGLKQAP+AW SRL+ KL++LGFK S 
Sbjct: 1083 HGYLEEEVYMLQPPGFEDPTKP-HHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSK 1142

Query: 1142 ADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIE 1201
             D+SLF L   +IT+++L+YVDDII+ SSS++AT  L+Q LK +FA+KDLG L YFLGIE
Sbjct: 1143 PDTSLFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIE 1202

Query: 1202 VKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRST 1261
            V K ++GI+L+Q +YA DLLK+V M  CKP +TP+  +EKL   +G  L  E+   YRS 
Sbjct: 1203 VSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSV 1262

Query: 1262 VGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMM 1321
            VGALQYLT+TRPD+AF+VNKVCQ+LH PT  HW AVKRILRY+K    LG++I KS + +
Sbjct: 1263 VGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTL 1322

Query: 1322 LSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEM 1380
            +SGFSDADWAGC DDRRST GFA+FLG+NL+SW++RKQATVSRSSTE+EYKAIAN TAE+
Sbjct: 1323 VSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEI 1382

BLAST of CmoCh03G008720 vs. NCBI nr
Match: gi|147790209|emb|CAN61322.1| (hypothetical protein VITISV_012106 [Vitis vinifera])

HSP 1 Score: 1061.2 bits (2743), Expect = 1.8e-306
Identity = 589/1428 (41.25%), Postives = 854/1428 (59.80%), Query Frame = 1

Query: 2    SIPNNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEP 61
            SIP+  M    ++  + VKL + NY+LW +QI   + +     F+DG+   P + ++   
Sbjct: 25   SIPSYQM----LNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEKDLSPG- 84

Query: 62   SEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS 121
                     ++NP F  W  QD+ +LS I SS+T  +++ ++G  T+  AW  LE  F+S
Sbjct: 85   ---------VMNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSS 144

Query: 122  TSRARAMQIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPD 181
            +SRAR MQ+R+EL + +K  M++ DY  K+K   D LAAIG+ + +++ +  +L GLG D
Sbjct: 145  SSRARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSD 204

Query: 182  YDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGA---NG 241
            Y+ +VT+I  R D  ++  +++ +L++E R  ++ + EQ+S AN  +  + RGG    NG
Sbjct: 205  YNAVVTAINIRDDKISLEAIHSMLLAFEHRLEQQSSIEQMS-ANYASSSNNRGGGRKFNG 264

Query: 242  GRGS-----------RGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHD 301
            GRG            RGR R     +GQ  R  ++P  +P          CQ+CGK  H 
Sbjct: 265  GRGQGYSPNNNNYTYRGRGR--GGRNGQGGRQNSSPSEKPQ---------CQLCGKFGHT 324

Query: 302  ALQCWHRFDQAYQA-------------ENNLKQAALATSGYTSDTNWYVDTGATDHITND 361
            A  C+HRFD ++Q              +NN+     + S   +D +WY+D+GA+ H+T +
Sbjct: 325  AQICYHRFDISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADESWYLDSGASHHLTQN 384

Query: 362  LERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGS--SLVLKHILYVPKINKHLISVQ 421
            L  LT+   YTGTD++ + NG  LSIS+IG+  +     S  LK + +VP I+ +LISV 
Sbjct: 385  LGNLTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRLKKVFHVPFISANLISVA 444

Query: 422  RLASDNNAVVEFHPNYFLVKDRVTKKLLLHGRCKNGLYVLP-----------HN----FS 481
            +  S+NNA++EFH N F VKD  TK +L  G+ +NGLY  P           +N     S
Sbjct: 445  KFCSENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPVFSNLKPYSSINNASAFHS 504

Query: 482  QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFG 541
            Q   T +   E WH RLGH +  I  +++   N+A  +    S +C+ CQL K+H+LP  
Sbjct: 505  QFSSTVENKAELWHNRLGHASFDIVSKVMNTCNVA--SGKYKSFVCSDCQLAKSHRLPTQ 564

Query: 542  SSQHVSTAPLQLIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQ 601
             S   ++ PL+L++TD+WGP SI S + ++Y++ FVDD+SRY W Y L+ K     +F  
Sbjct: 565  LSNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIFKX 624

Query: 602  FQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIV 661
            F+  +E   +TKI+ +QSD GGE+    ++ ++ GI H  SCP+   QNG VERKHRH+V
Sbjct: 625  FKLQMENQFDTKIKCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYNSXQNGRVERKHRHVV 684

Query: 662  ETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGC 721
            ETGLALL+ A++P+ YW  AF T  FLINRMPS+ ++ D+P   LF + PDY   RVFGC
Sbjct: 685  ETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFRRHPDYKSFRVFGC 744

Query: 722  ACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEE 781
             C+P +RPYN  KL +R+ +C+FLGYS +HKG+ CL+ +TGR+YI+  VVFDE+ FP  +
Sbjct: 745  LCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFPLAQ 804

Query: 782  SKPPNKTTNPHHPVLLPALAKLASFYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVS 841
            SK  + + +       PAL    SF        + P    SH +        S++    +
Sbjct: 805  SKSSSSSNDTSAEGSTPALITPPSF------PCLLPDSKISHASIDSHSLSTSESPIPTT 864

Query: 842  LSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQF 901
             SS  +T SS    +   +S               +P   A    M TR    I + K  
Sbjct: 865  SSSPLDTSSSSPAIDLSPKS-------------VPEPQITALAPRMTTRSMRGITKKKTI 924

Query: 902  TDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATW 961
             D             SA+ +        +EP  L++A + P W  AM  E++AL RN TW
Sbjct: 925  LDL------------SAIKV--------SEPSTLKQAFKDPNWTKAMEMEIAALHRNHTW 984

Query: 962  DLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPST 1021
            DLV   P +N+I  KWVYK+K K DGS+ER KARLVAKG+ Q  G+DY +TFSPV+K +T
Sbjct: 985  DLVEQPPNVNVIGCKWVYKLKHKPDGSIERYKARLVAKGYNQTHGLDYFETFSPVVKAAT 1044

Query: 1022 IRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYG 1081
            IR+IL++A++  W +RQ+D+ NAFL+G L+E+VYM QPPG+ D   P N +C+LKKALYG
Sbjct: 1045 IRIILTVALSFKWEIRQLDVHNAFLNGELEEQVYMSQPPGYFDPQFP-NRVCRLKKALYG 1104

Query: 1082 LKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATE 1141
            LKQAP+AW  RL+  L++ GF  S  DSS+F+   +  T+ +L+YVDDI++  SS     
Sbjct: 1105 LKQAPRAWFQRLSSALLQWGFSMSRTDSSMFLHFGKATTLIVLVYVDDILVTGSSSTQIS 1164

Query: 1142 RLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPM 1201
             LI KL   FA++DLG L +FLGIEV      + LSQ +Y  DLL R  +   KP +TP 
Sbjct: 1165 SLIAKLDSVFALRDLGQLSFFLGIEVSYNEGSMTLSQTKYISDLLHRTELFDTKPANTPG 1224

Query: 1202 GSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGA 1261
               + L +  G P++  +   YRS VGALQY+T+TRPD+AFAVNK CQ++  PT AHW +
Sbjct: 1225 AVGKNLSKFDGDPMT--DVTHYRSVVGALQYVTLTRPDIAFAVNKACQFMQQPTTAHWLS 1284

Query: 1262 VKRILRYVKGTLALGVKIQ-KSTMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSS 1321
            VKRILRY++GT+  G+     S + + GF+DADW    DDRRS+SG+ V+LG NL+SWSS
Sbjct: 1285 VKRILRYLRGTMQDGLLFSPSSNLTIEGFTDADWGAHLDDRRSSSGYLVYLGGNLVSWSS 1344

Query: 1322 RKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPV 1381
             KQ  VSRSS E+EY+ +   TAE++W+++LL+EL V     P LW DN+ A ++  NPV
Sbjct: 1345 TKQKVVSRSSAESEYRGLVFATAEIVWMQALLQELCVPIPAIPLLWYDNISAYHMAKNPV 1382

Query: 1382 FHARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPF 1384
            FHARTKHIE+D HF+R+QV R  ++++F+ + +Q  D+LTK L+ + F
Sbjct: 1405 FHARTKHIEIDLHFIRDQVMRGKIQLQFVPTEEQPVDLLTKHLTSSRF 1382

BLAST of CmoCh03G008720 vs. NCBI nr
Match: gi|147856699|emb|CAN81355.1| (hypothetical protein VITISV_039158 [Vitis vinifera])

HSP 1 Score: 1028.5 bits (2658), Expect = 1.3e-296
Identity = 587/1422 (41.28%), Postives = 843/1422 (59.28%), Query Frame = 1

Query: 2    SIPNNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEP 61
            SIP+  M + S+     VKL + NY+LW +QI   + +     F+DG+   P + +   P
Sbjct: 22   SIPSYQMLNYSLP----VKLDRTNYILWRSQIDNVIFANGFEDFIDGTSVCPEKEL--RP 81

Query: 62   SEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS 121
             E        INP F     QD+ +LS I SS+T  +++ ++G  ++  AW  LE+ F+S
Sbjct: 82   GE--------INPAFVAXRRQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSS 141

Query: 122  TSRARAMQIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPD 181
             SRAR MQ+ +E  + +K  M++ DY  KVK   D+LAAIG+ + +++ I  +L GLG D
Sbjct: 142  CSRARIMQLXLEFQSTKKGSMSMIDYIMKVKGAADSLAAIGEPVSEQDQIMNLLGGLGSD 201

Query: 182  YDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLS--SANNVNRISIRGGA--- 241
            Y+ +VT+I  R D  ++  V++ +L++E R  ++G+ EQL   SAN  +  + RGG    
Sbjct: 202  YNAVVTAINIREDKISLEAVHSMLLAFEQRLEQQGSIEQLPAMSANYASXSNNRGGGRKY 261

Query: 242  NGGRGSRGRSRQLN-SGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRF 301
            NGGRG        N  G G+  R     GRQ S   SS    CQ+CGK  H    C+HRF
Sbjct: 262  NGGRGPNFMMTNSNFRGRGRGXR-YGQSGRQNSS--SSERPQCQLCGKFGHTVQVCYHRF 321

Query: 302  DQAYQA------------ENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRER 361
            D  +Q+             +N   A +A S   +D NWY+D+GA+ H+T ++  LT    
Sbjct: 322  DITFQSTQNNTTGVSNSGNSNXMPAMVAXSNNXADDNWYLDSGASHHLTQNVANLTNATP 381

Query: 362  YTGTDQIQVANGAGLSISHIGNSLISGS--SLVLKHILYVPKINKHLISVQRLASDNNAV 421
            YTG D++ + NG  L+IS+   + +  +  S  LK + +VP I+ +LISV +  SDNNA+
Sbjct: 382  YTGADKVTIGNGKHLTISNTXFTRLFSNPHSFQLKKVFHVPFISANLISVAKFCSDNNAL 441

Query: 422  VEFHPNYFLVKDRVTKKLLLHGRCKNGLYVLP--HNFSQALL-----------TAKLSKE 481
            +EFH N F +KD  TK++L  G+ +NGLY  P   N   A +             +  +E
Sbjct: 442  IEFHSNGFFLKDLHTKRVLAQGKLENGLYKFPVISNKKTAYVGITNDSTFQCSNIENKRE 501

Query: 482  QWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQ 541
             WH RLGH A+ I  RI+ + N++       +++C++CQL K+H+LP   S   ++ PL+
Sbjct: 502  LWHHRLGHAATDIVTRIMHNCNVSCGKY--KATVCSSCQLAKSHRLPTHLSSFHASKPLE 561

Query: 542  LIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNT 601
            L++TD+WGP S+ S + +KY++ FVDD+SRY W+Y L+ K     +F  F+  VE     
Sbjct: 562  LVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEA 621

Query: 602  KIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQAN 661
            KI+ +Q D GGE+    ++ + +GI H  SCP+   QNG VERKHRH+VETGLALLA A 
Sbjct: 622  KIKCLQXDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAG 681

Query: 662  MPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNN 721
            +PL +W  AF TA FLINRMPS+ +   +P   LF ++PDY  LRVFGC C+P +RPYNN
Sbjct: 682  LPLKFWSYAFQTATFLINRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNN 741

Query: 722  KKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPH 781
             KL +R+ +C+FLGYS  HKGY CL+  TGR+Y+S  VVFDE  FPF ++   + + +  
Sbjct: 742  HKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISSSPSKDAS 801

Query: 782  HPVLLPALAKLASFYTENALTDIEPVVSNSHMNDGQTDNIASDNLSG-----VSLSSADN 841
               ++P +           +    P   + H   G   ++AS NL+       S +    
Sbjct: 802  DESIIPXI-----------IVSSNPSTLSFH---GSNHSMASPNLTSTLTHPTSPTDTPT 861

Query: 842  TRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQFTDGTIR 901
            TR S E    EAE   + AQ Q    V   P        + TR  + I + K        
Sbjct: 862  TRXSRE-PVLEAE-VXLPAQQQV---VVPPPR-------VTTRSMSGITKRK-------- 921

Query: 902  YSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPK 961
                         I        +EP  L++A++ P W  AM+ E++AL +N TWDLV P 
Sbjct: 922  ------------PIFNLAASKISEPTTLKQAIKDPNWAEAMHTEIAALHKNQTWDLVDPP 981

Query: 962  PGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILS 1021
              +N+I  KWVYK+K K DGSV+R KARLVA+GF Q FG+DY +TFSPV+K +TIR++L+
Sbjct: 982  KDVNIIGCKWVYKLKYKXDGSVDRYKARLVARGFNQTFGLDYFETFSPVVKAATIRIVLT 1041

Query: 1022 LAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPK 1081
            + ++  W +RQ+D             VYM QPPGF     P N +CKLKKALYGLKQ+P+
Sbjct: 1042 IXLSYRWELRQLD-------------VYMAQPPGFLHPNHP-NKVCKLKKALYGLKQSPR 1101

Query: 1082 AWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKL 1141
            AW ++L+  L+  GF +S  DSS+F+   R  T+ +L+YVDDII+  SS    ++LI KL
Sbjct: 1102 AWFTKLSSALLSXGFNSSRTDSSMFVHFGRHSTLIVLVYVDDIIVTGSSPILIQQLIHKL 1161

Query: 1142 KIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKL 1201
               FA++DLG L YFLGIEV      + LSQR+Y  DLL+R +M   K  +TP      L
Sbjct: 1162 HSLFALRDLGQLSYFLGIEVTYDGGSLHLSQRKYITDLLQRTSMLDSKAAATPGTVGLSL 1221

Query: 1202 FREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILR 1261
             +  G  +  ++   YRS VGALQY T+TRPD+AF++NK CQ++H PT  HW +VKRILR
Sbjct: 1222 SQFDGDLM--DDVTMYRSVVGALQYATLTRPDIAFSINKACQFMHRPTSTHWSSVKRILR 1281

Query: 1262 YVKGTLALGVKIQKST-MMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATV 1321
            Y+KGT+  G+ +Q S    +  ++DADW   PDDRRS+SG+ V+LG NL+SW++ KQ  V
Sbjct: 1282 YLKGTITHGLLLQPSAHFTIQAYTDADWGAQPDDRRSSSGYLVYLGNNLVSWTASKQKVV 1341

Query: 1322 SRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTK 1381
            SRSS E+EY+ +A  TAE+IW ++LL+EL +  +  P L+ DN+ A Y+  NPVFHARTK
Sbjct: 1342 SRSSAESEYRGLAIATAEIIWTQALLRELCISITSIPTLYYDNISAYYMAKNPVFHARTK 1362

Query: 1382 HIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPF 1384
            HIE+D HF+R+QV    +++++I S+DQ ADILTK L+ + F
Sbjct: 1402 HIEIDLHFIRDQVLHNKLQLQYIPSTDQPADILTKHLTSSRF 1362

BLAST of CmoCh03G008720 vs. NCBI nr
Match: gi|1012364758|gb|KYP75940.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan])

HSP 1 Score: 1011.9 bits (2615), Expect = 1.2e-291
Identity = 581/1443 (40.26%), Postives = 836/1443 (57.93%), Query Frame = 1

Query: 12   SISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKII 71
            + S  IS KL+++N+L W  Q    +R   L   + G+M  P+Q        +    K +
Sbjct: 15   AFSNPISSKLSEDNFLTWRQQAESTIRGYRLKKHILGAMHVPAQH-----KTDEDKAKGV 74

Query: 72   INPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAMQIR 131
            ++PE+  +  QD L+ S +  S+  +    MVG     + W  LE  FAS ++AR  Q++
Sbjct: 75   LSPEYEDYDQQDNLLKSWLLESMEPQFKVRMVGYEWCHQIWNNLEIYFASQTKARVKQLK 134

Query: 132  MELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITT 191
            ++L  I KK   I  Y  ++K + + LAAIG  +   E I  +  GL  +YDP +TS+ T
Sbjct: 135  IQLRGI-KKTTAINQYLLEIKKIVNNLAAIGSPLNTAEHIDAIFDGLSEEYDPFITSVLT 194

Query: 192  RTDVYTVSDVYAHMLSYEMRHLRKGTFEQL--------SSANNVNRISIRGGANGGRGSR 251
            RT+ Y+V  + + +++ E R  +    E +         S N+  + + +G  +   G+ 
Sbjct: 195  RTEEYSVEQIESLLMAQEERLEKHKASESVPLQANLAQGSFNSRKQFTNQGRGSNNNGTH 254

Query: 252  GRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAEN 311
            GR      G G+S +      +QP          CQ+CGK  H A  CWHR+DQ Y   N
Sbjct: 255  GRGPHRGRGRGRSAQHFGRGNKQP----------CQVCGKIGHIAFHCWHRYDQQYTEPN 314

Query: 312  -----------NLKQAALATSGYTS---DTNWYVDTGATDHITNDLERLTTRERYTGTDQ 371
                       N +Q     +G  +   D  WY D+GAT+H+T+DL  L ++  YTG D+
Sbjct: 315  LNHNTNVYNPGNQQQMQAMIAGSQNMVYDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDK 374

Query: 372  IQVANGAGLSISHIGNSL----ISGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFH 431
            I + NG  + I+H G S     +S     LK +L+VP I K+L+SV +   DNN  VEFH
Sbjct: 375  IHMGNGQAIGINHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFH 434

Query: 432  PNYFLVKDRVTKKLLLHGRCKNGLYV------------------LPHNFSQALLT-AKLS 491
             NY LVK + +K+ LL G  KNGLYV                  +P N +   +   + S
Sbjct: 435  TNYCLVKSQDSKETLLRGNLKNGLYVFDEVQILKPDVYEHTVDSVPTNRTTLYVQRTRKS 494

Query: 492  KEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAP 551
             + WH RL H +  I   +++  N+ +  N   S +C +C +GK+H LPF  S  V  +P
Sbjct: 495  YDVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNSP 554

Query: 552  LQLIHTDVWGPS-IASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETML 611
            L+L+++DVWGPS  AS    +YYV F D FS+Y WIYF+  KS+    F+ F+  VE   
Sbjct: 555  LELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQF 614

Query: 612  NTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQ 671
              KI+  QSD G E+  L   F   GI H +SCPH+HQQNG  ERKHRHI E GL LL+ 
Sbjct: 615  GHKIKMFQSDGGKEFTCLTKLFNENGITHRLSCPHSHQQNGTAERKHRHITEVGLTLLSS 674

Query: 672  ANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPY 731
            + +P  +W +AF+TA  +INR+P+  +   +P   LF K PDY +LR FGCAC+P+LRP+
Sbjct: 675  SGLPHIFWSDAFSTAIHVINRLPTPILGHKSPYEVLFNKIPDYLLLRPFGCACYPHLRPF 734

Query: 732  NNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKT-- 791
            N+ K+ FR+++C+F+GYS  HKGYKC   + G+I ISR+VVFDE+ FP       N    
Sbjct: 735  NSHKMDFRSSQCVFIGYSMQHKGYKCFT-TNGKIIISRNVVFDEDTFPGPSYFNTNNVAG 794

Query: 792  -TNPHHPVLLPALAKLAS-FYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSAD 851
             ++ H P  +P++  L S     N+ T + P+VS+        +++    L+  + +S D
Sbjct: 795  LSSSHSPQPVPSIHVLPSQSLAPNSATTV-PLVSSI------DESLQDSQLTSTTDTSQD 854

Query: 852  NTRSSEEIAEYEAESSSINAQN--QTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQFTDG 911
            N  +S         SS  N Q    T    +   T   +QHPM TR +  + + K F   
Sbjct: 855  NLITS---------SSQPNPQPIITTVPDPASPATRTTNQHPMITRAKIGVFKPKAFL-- 914

Query: 912  TIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLV 971
                                     +EP ++ +A+ +  W+ AM DE +AL +N TWDLV
Sbjct: 915  -----------------------ATSEPISVAQALDNKHWKQAMQDEYNALLKNHTWDLV 974

Query: 972  PPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRV 1031
               PG   I  KW++K K K DGS+ R KARLVA+GF Q+ G+DYTDTFSPV+KP +IR+
Sbjct: 975  SLPPGRTAITCKWIFKNKYKQDGSILRHKARLVARGFSQQQGLDYTDTFSPVVKPVSIRI 1034

Query: 1032 ILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQ 1091
            +L+LAV+KGW + Q+D+ NAFL+G LKE++YM QP GF + A   N +CKL+KALYGLKQ
Sbjct: 1035 VLALAVSKGWPIHQIDVDNAFLNGDLKEDIYMLQPQGFHNGA--PNTVCKLRKALYGLKQ 1094

Query: 1092 APKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLI 1151
            AP+AW  +LT  L++LGFK + +DSSLF   ++  +IY+LIYVDDIII S+S  A + LI
Sbjct: 1095 APRAWFQKLTLILLQLGFKQARSDSSLFTFTSKVTSIYILIYVDDIIITSNSPAAIQTLI 1154

Query: 1152 QKLKIDFAVKDLGGLEYFLGIEVKKT-RDGIILSQRRYALDLLKRVNMEKCKPMSTPMGS 1211
              L   F +KDLG L YFLGIEV      GI LSQ +Y  D+L ++NM   KP+ TPM  
Sbjct: 1155 STLHRFFPLKDLGSLHYFLGIEVNSDGAGGIHLSQTKYLKDILDKLNMSNAKPVKTPMAP 1214

Query: 1212 AEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVK 1271
            + KL  + G  +  +    YRS +GALQYLT+TRPD+A+ VNK+CQ++H P ++HW AVK
Sbjct: 1215 SLKLTND-GTAVCPDPSL-YRSVIGALQYLTITRPDIAYTVNKLCQFMHHPLESHWKAVK 1274

Query: 1272 RILRYVKGTLALGVKIQKST-MMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRK 1331
            R+LRY++GTL  G+  +KST   +  + D+DWA   +D RSTSG  V+LG N++SW ++K
Sbjct: 1275 RLLRYLQGTLQHGLHYKKSTDTGIHAYCDSDWASDHEDMRSTSGNCVYLGPNIVSWMAKK 1334

Query: 1332 QATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFH 1391
            Q  VSRSSTEAE++++A+L  E+ +I++LL EL    ++ P +WCDN GA  L++NPV H
Sbjct: 1335 QRVVSRSSTEAEFRSLASLVTEVQYIQNLLSELHNSSTQPPLIWCDNQGAVLLSANPVLH 1394

Query: 1392 ARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHFLHKLDTIYAT 1401
             +TKH E+D  FVRE+VAR  ++V+ I +  QVAD+LTK  S + F     HKL     +
Sbjct: 1395 TKTKHFELDLWFVRERVARGQIQVKHIPARFQVADLLTKAPSSSIFLA-LRHKLTVDKQS 1394