CmoCh03G008360 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G008360
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Dehydration responsive element binding transcription factor) (Ethylene-responsive transcription factor)
Location	Cmo_Chr03 : 6662075 .. 6663100 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCAGCTATAGATGTTTATACTGGAATTTCAACGCAGGTTTACTCTTCGGATCCTTTTAGCGAGGAATTAATGAAGGCATTTCAACCTTTTATGAAAAGTGCTGTTTCAACCTCCTACTCTTCTTCTTCTTCTTCTTCTTCTGTTTCTTGTCAGCCAAGATTAAGTACTGCTGTTTGCTCCCCGTCGAGCACCTGCTTGTTTTCTCAAGGCTTCTCGGGAATTGAGCAGATGGGTCTTGAGCAATCAGGTCCAATCGGCCTAAACAATCTCACCCCTTCTCAGATATGCCAAATTCAAGCTCAAATTCAGCTACCCCCACAAACCATGTCTTCCCTCTCTTCTTCTTCTTCTTCTTTCCAGTCTCAATATTGTAACTTCCTTGCCCCCAAATCCATCCCCATGAAGCTCATTGGCTCTCCATCTAAGCCCACTAAACTGTACAGGGGAGTCCGGCAGCGGCACTGGGGAAAATGGGTGGCAGAAATCAGACTCCCAAAGAACCGAACCAGGCTTTGGCTTGGGACCTTCGACACGTCCGAGGAGGCTGCTTTAGCCTATGACAAAGCTGCTTACAAGCTCCGTGGGGAGTTTGCCAGGCTCAATTTCCCACATCTCAAACACCAATTCGGAGAATTCAAACCTCTTCACCCTTCTGTGGACGCGAAACTTCAAGCAATTTGTGAGAGCCTGAAACAGGGGAAAACAGAGAAGCTCTGTTCTGCTGAGGATGAAAAGGCAAACACCAGTCCACCTCCATTGGAGTCAAACTTAGTGGTTGACAATTATTGGGAACCGGAATTGAAAAGCGAAGTGGAGACCTCATCCTCATCCTCATCCTCATCCTCGTCTCCTTCACGGTCTGAAGAATTGTCCACCGGATCATCCCCTGAATCAAGTATCAGCTTCTTGGATTTTTCAGATTCCCAATGGGGTGAAGGAGAAGCATTTTGTTTGGAGAAGTTTCCTTCTGTGGAAATTGACTGGGCAGCTCTGAGTCAAATGGTCGAATGGGAGTGTTAA

mRNA sequence

ATGGCTGCAGCTATAGATGTTTATACTGGAATTTCAACGCAGGTTTACTCTTCGGATCCTTTTAGCGAGGAATTAATGAAGGCATTTCAACCTTTTATGAAAAGTGCTGTTTCAACCTCCTACTCTTCTTCTTCTTCTTCTTCTTCTGTTTCTTGTCAGCCAAGATTAAGTACTGCTGTTTGCTCCCCGTCGAGCACCTGCTTGTTTTCTCAAGGCTTCTCGGGAATTGAGCAGATGGGTCTTGAGCAATCAGGTCCAATCGGCCTAAACAATCTCACCCCTTCTCAGATATGCCAAATTCAAGCTCAAATTCAGCTACCCCCACAAACCATGTCTTCCCTCTCTTCTTCTTCTTCTTCTTTCCAGTCTCAATATTGTAACTTCCTTGCCCCCAAATCCATCCCCATGAAGCTCATTGGCTCTCCATCTAAGCCCACTAAACTGTACAGGGGAGTCCGGCAGCGGCACTGGGGAAAATGGGTGGCAGAAATCAGACTCCCAAAGAACCGAACCAGGCTTTGGCTTGGGACCTTCGACACGTCCGAGGAGGCTGCTTTAGCCTATGACAAAGCTGCTTACAAGCTCCGTGGGGAGTTTGCCAGGCTCAATTTCCCACATCTCAAACACCAATTCGGAGAATTCAAACCTCTTCACCCTTCTGTGGACGCGAAACTTCAAGCAATTTGTGAGAGCCTGAAACAGGGGAAAACAGAGAAGCTCTGTTCTGCTGAGGATGAAAAGGCAAACACCAGTCCACCTCCATTGGAGTCAAACTTAGTGGTTGACAATTATTGGGAACCGGAATTGAAAAGCGAAGTGGAGACCTCATCCTCATCCTCATCCTCATCCTCGTCTCCTTCACGGTCTGAAGAATTGTCCACCGGATCATCCCCTGAATCAAGTATCAGCTTCTTGGATTTTTCAGATTCCCAATGGGGTGAAGGAGAAGCATTTTGTTTGGAGAAGTTTCCTTCTGTGGAAATTGACTGGGCAGCTCTGAGTCAAATGGTCGAATGGGAGTGTTAA

Coding sequence (CDS)

ATGGCTGCAGCTATAGATGTTTATACTGGAATTTCAACGCAGGTTTACTCTTCGGATCCTTTTAGCGAGGAATTAATGAAGGCATTTCAACCTTTTATGAAAAGTGCTGTTTCAACCTCCTACTCTTCTTCTTCTTCTTCTTCTTCTGTTTCTTGTCAGCCAAGATTAAGTACTGCTGTTTGCTCCCCGTCGAGCACCTGCTTGTTTTCTCAAGGCTTCTCGGGAATTGAGCAGATGGGTCTTGAGCAATCAGGTCCAATCGGCCTAAACAATCTCACCCCTTCTCAGATATGCCAAATTCAAGCTCAAATTCAGCTACCCCCACAAACCATGTCTTCCCTCTCTTCTTCTTCTTCTTCTTTCCAGTCTCAATATTGTAACTTCCTTGCCCCCAAATCCATCCCCATGAAGCTCATTGGCTCTCCATCTAAGCCCACTAAACTGTACAGGGGAGTCCGGCAGCGGCACTGGGGAAAATGGGTGGCAGAAATCAGACTCCCAAAGAACCGAACCAGGCTTTGGCTTGGGACCTTCGACACGTCCGAGGAGGCTGCTTTAGCCTATGACAAAGCTGCTTACAAGCTCCGTGGGGAGTTTGCCAGGCTCAATTTCCCACATCTCAAACACCAATTCGGAGAATTCAAACCTCTTCACCCTTCTGTGGACGCGAAACTTCAAGCAATTTGTGAGAGCCTGAAACAGGGGAAAACAGAGAAGCTCTGTTCTGCTGAGGATGAAAAGGCAAACACCAGTCCACCTCCATTGGAGTCAAACTTAGTGGTTGACAATTATTGGGAACCGGAATTGAAAAGCGAAGTGGAGACCTCATCCTCATCCTCATCCTCATCCTCGTCTCCTTCACGGTCTGAAGAATTGTCCACCGGATCATCCCCTGAATCAAGTATCAGCTTCTTGGATTTTTCAGATTCCCAATGGGGTGAAGGAGAAGCATTTTGTTTGGAGAAGTTTCCTTCTGTGGAAATTGACTGGGCAGCTCTGAGTCAAATGGTCGAATGGGAGTGTTAA

Homology

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BLAST of CmoCh03G008360 vs. Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.1e-59
Identity = 165/362 (45.58%), Postives = 212/362 (58.56%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSSSSVSCQPRLSTAV 60
           MAAA+++YT       S      ELM A  PF+KS   +  SSS++S+S    P   +  
Sbjct: 1   MAAAMNLYTCSR----SFQDSGGELMDALVPFIKSVSDSPSSSSAASASAFLHPSAFSLP 60

Query: 61  CSPS---STCLFSQGFSGIEQMGLEQSGP-IGLNNLTPSQICQIQAQIQLPPQTMSSLSS 120
             P     +   +Q FS      L+Q+G  IGLNNL+ SQI QIQ+QI  P      L  
Sbjct: 61  PLPGYYPDSTFLTQPFS--YGSDLQQTGSLIGLNNLSSSQIHQIQSQIHHP------LPP 120

Query: 121 SSSSFQSQYCNFLAPKSIPMKLIGS-----------PSKPTKLYRGVRQRHWGKWVAEIR 180
           +  +  + + N L+PK + MK  G            PSKPTKLYRGVRQRHWGKWVAEIR
Sbjct: 121 THHNNNNSFSNLLSPKPLLMKQSGVAGSCFAYGSGVPSKPTKLYRGVRQRHWGKWVAEIR 180

Query: 181 LPKNRTRLWLGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKH-------QFGEFKPLH 240
           LP+NRTRLWLGTFDT+EEAALAYDKAAYKLRG+FARLNFP+L+H        FGE+KPLH
Sbjct: 181 LPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLH 240

Query: 241 PSVDAKLQAICESL----KQGKTEKLCSAEDEKANTSPPPLESNLVVDNYWEPELKSEVE 300
            SVDAKL+AIC+S+    KQ K+ K     ++K ++                P+L  +V+
Sbjct: 241 SSVDAKLEAICKSMAETQKQDKSTKSSKKREKKVSS----------------PDLSEKVK 300

Query: 301 TSSSSSSSSSSP--SRSEELSTGSSPESSISFLDFSD-SQWGEGEAFCLEKFPSVEIDWA 334
              +S S   SP  +  EE + GSSP S ++F D  +  QW   E F LEK+PS EIDW 
Sbjct: 301 AEENSVSIGGSPPVTEFEESTAGSSPLSDLTFADPEEPPQW--NETFSLEKYPSYEIDWD 332

[Close]

BLAST of CmoCh03G008360 vs. Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.8e-54
Identity = 160/343 (46.65%), Postives = 194/343 (56.56%), Query Frame = 1


Query: 3   AAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSSSSVSCQPRLSTAVCS 62
           AAID++        ++DPF EELMKA QP         Y++++ SSS    P  S  V  
Sbjct: 2   AAIDMFNS------NTDPFQEELMKALQP---------YTTNTDSSS----PTYSNTV-- 61

Query: 63  PSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSLSSSSSSFQ 122
                            G  Q+  +GLN LTP QI QIQ Q+    Q  + +S +     
Sbjct: 62  ----------------FGFNQTTSLGLNQLTPYQIHQIQNQLN---QRRNIISPN----- 121

Query: 123 SQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTSE 182
                 LAPK +PMK + +     KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT+E
Sbjct: 122 ------LAPKPVPMKNMTAQ----KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAE 181

Query: 183 EAALAYDKAAYKLRGEFARLNFPHLKHQFGE------FKPLHPSVDAKLQAICESLKQGK 242
           EAA+AYD AAYKLRGEFARLNFP  +H+ G       F PLH SVDAKLQ IC+SL++ +
Sbjct: 182 EAAMAYDLAAYKLRGEFARLNFPQFRHEDGYYGGGSCFNPLHSSVDAKLQEICQSLRKTE 241

Query: 243 TEKLCSAEDEKANTSPPPLESNLVVDNYWEPELKSEVETSSSSSSSSSSPSRSEELSTGS 302
              L  +E E     PP  E             +SE     S  +S S  S  E     S
Sbjct: 242 DIDLPCSETE---LFPPKTEYQ-----------ESEYGFLRSDENSFSDESHVE----SS 271

Query: 303 SPESSI-SFLDFSDSQWGEGEAFCLEKFPSVEIDWAALSQMVE 339
           SPES I +FLDFSDS + E  +F LEKFPSVEIDW A+S++ E
Sbjct: 302 SPESGITTFLDFSDSGFDEIGSFGLEKFPSVEIDWDAISKLSE 271

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BLAST of CmoCh03G008360 vs. Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-48
Identity = 129/263 (49.05%), Postives = 166/263 (63.12%), Query Frame = 1


Query: 80  GLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSLSSSSSSFQSQYCNFLAPKSIPMK-L 139
           G+ +S P+GLN LTP QI QIQ Q+     T+S+LS               P  I MK L
Sbjct: 16  GVNKSMPLGLNQLTPYQIHQIQNQLNHRRSTISNLS---------------PNRIRMKNL 75

Query: 140 IGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTSEEAALAYDKAAYKLRGE 199
             S SK   LYRGVRQRHWGKWVAEIRLPKNRTRLWLGTF+T+E+AALAYD+AA++LRG+
Sbjct: 76  TPSTSKTKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGD 135

Query: 200 FARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQGKTEKLCSAEDEKANTS----PPP 259
            A+LNFP+L H+  +  PL  SVD KLQAIC+SL+  KTE++CS  D+    S       
Sbjct: 136 IAKLNFPNLIHE--DMNPLPSSVDTKLQAICKSLR--KTEEICSVSDQTKEYSVYSVSDK 195

Query: 260 LESNLVVDNYWEPELKSEVETSSSSSSSSSSPSRS-EELSTGSSPESSISFLDFSDSQWG 319
            E  L     + P+ +  +ET+  S+ S  S   S  + S      S  +FLDFSD+++ 
Sbjct: 196 TELFLPKAELFLPK-REHLETNELSNESPRSDETSLLDESQAEYSSSDKTFLDFSDTEFE 255

Query: 320 EGEAFCLEKFPSVEIDWAALSQM 337
           E  +F L KFPSVEIDW A+S++
Sbjct: 256 EIGSFGLRKFPSVEIDWDAISKL 258

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BLAST of CmoCh03G008360 vs. Swiss-Prot
Match: RA213_ARATH (Ethylene-responsive transcription factor RAP2-13 OS=Arabidopsis thaliana GN=RAP2-13 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.7e-46
Identity = 109/217 (50.23%), Postives = 141/217 (64.98%), Query Frame = 1


Query: 125 YCNFLAPKSIPMKLIG-SPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTSEE 184
           + + L+PK + MK  G S +KPTKLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDT+EE
Sbjct: 58  FSHHLSPKPVSMKQTGTSAAKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEE 117

Query: 185 AALAYDKAAYKLRGEFARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQGKTEKLCSA 244
           AALAYDKAAYKLRG+FARLNFP L+H   E++PL  SVDAKL+AIC++L +   +++ S 
Sbjct: 118 AALAYDKAAYKLRGDFARLNFPDLRHN-DEYQPLQSSVDAKLEAICQNLAETTQKQVRST 177

Query: 245 EDEKANTSPPPLESNLVVDNYWEPELKSEVETSSSSSSSSSSPSRSEELSTG--SSPESS 304
           +   +      +   L  ++Y               SS+ SSP  +E   +G  SSP S 
Sbjct: 178 KKSSSRKRSSTVAVKLPEEDY---------------SSAGSSPLLTESYGSGGSSSPLSE 237

Query: 305 ISFLDFSDS---QWGEGEAFCLEKFPSVEIDWAALSQ 336
           ++F D  +     W E     LEK+PS EIDW ++ Q
Sbjct: 238 LTFGDTEEEIQPPWNEN---ALEKYPSYEIDWDSILQ 255

[Close]

BLAST of CmoCh03G008360 vs. Swiss-Prot
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-45
Identity = 135/319 (42.32%), Postives = 180/319 (56.43%), Query Frame = 1


Query: 21  FSEELMKAFQPFMKSAVSTSYSSSSSSSSVSCQPRLSTAVCSPSSTCLFSQGFSGIEQMG 80
           + +E M+A +PFMK        +SSSS+S S  P+  T    P++  +            
Sbjct: 8   YVDEFMEALEPFMKV-------TSSSSTSNSSNPKPLTPNFIPNNDQVLPVS-------- 67

Query: 81  LEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSLSSSSSSFQSQYCNFLAPKSIPMKLIG 140
             Q+GPIGLN LTP+QI QIQ ++ L  Q  S   + S        + L  K   MK I 
Sbjct: 68  -NQTGPIGLNQLTPTQILQIQTELHLR-QNQSRRRAGS--------HLLTAKPTSMKKID 127

Query: 141 SPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTSEEAALAYDKAAYKLRGEFA 200
             +KP KLYRGVRQR WGKWVAEIRLPKNRTRLWLGTF+T++EAALAYD+AA+K+RG+ A
Sbjct: 128 VATKPVKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNA 187

Query: 201 RLNFPHLKHQFGEFKP-LHPSVDAKLQAICESLKQGKTEKLCSAEDEKANTSPPPLESNL 260
           RLNFP +  Q G +K  L PS++AK+++IC S        L   + EK N      ++  
Sbjct: 188 RLNFPDIVRQ-GHYKQILSPSINAKIESICNS------SDLPLPQIEKQN------KTEE 247

Query: 261 VVDNYWEPELKSEVETSSSSSSSSSSPSRSEELSTGSSPESSISFLDFSDSQWGEGEAFC 320
           V+  + +PE + E         S            GSSPES I+ LDFS     E E+F 
Sbjct: 248 VLSGFSKPEKEPEFGEIYGCGYS------------GSSPESDITLLDFSSDCVKEDESFL 276

Query: 321 --LEKFPSVEIDWAALSQM 337
             L K+PS+EIDW A+ ++
Sbjct: 308 MGLHKYPSLEIDWDAIEKL 276

[Close]

BLAST of CmoCh03G008360 vs. TrEMBL
Match: A0A0A0KGT3_CUCSA (AP2/ERF domain-containing transcription factor OS=Cucumis sativus GN=Csa_6G500550 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.6e-107
Identity = 215/269 (79.93%), Postives = 225/269 (83.64%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSSS------SVSCQP 60
           MAA IDVY G ST VY SDPFSEELMKA QPFMKSA+STS S S SSS      SVS QP
Sbjct: 1   MAAVIDVYGGTSTPVYYSDPFSEELMKALQPFMKSAISTSSSFSPSSSPSPPHPSVSSQP 60

Query: 61  RLSTAVCSPSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSL 120
           RL    CSPSST LFSQGFSGIEQMG EQSGPIGLNN TPSQI QIQAQIQLP  TMSS 
Sbjct: 61  RLIPDFCSPSSTRLFSQGFSGIEQMGFEQSGPIGLNNPTPSQILQIQAQIQLPSPTMSSF 120

Query: 121 SSSSSSFQSQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLW 180
           SSSSS FQSQY NFL PKS PMK +GSP KP KLYRGVRQRHWGKWVAEIRLPKNRTRLW
Sbjct: 121 SSSSS-FQSQYHNFLTPKSFPMKHMGSPPKPNKLYRGVRQRHWGKWVAEIRLPKNRTRLW 180

Query: 181 LGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQ 240
           LGTFDT+EEAALAYD+AAYKLRG+FARLNFPHLKHQFG+FKPLHPSVDAKLQ+IC+SLKQ
Sbjct: 181 LGTFDTAEEAALAYDQAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQSICQSLKQ 240

Query: 241 GKTEKLCSAEDEKANTSPPPLESNLVVDN 264
           GKTE +CS EDEK  T P P ESN  + N
Sbjct: 241 GKTE-VCSVEDEKPTTIPLPSESNSAILN 267

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BLAST of CmoCh03G008360 vs. TrEMBL
Match: A0A067LEQ3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24071 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.1e-95
Identity = 220/359 (61.28%), Postives = 251/359 (69.92%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYS-SDPFSEELMKAFQPFMKSAVSTSYSSSSSSSS---------- 60
           MAAAID+Y   +  V+S  DP  EELMKA +PFMKSA  TS SSS S S           
Sbjct: 1   MAAAIDIYNSKTAPVFSVMDPCREELMKALEPFMKSASPTSPSSSFSLSPPPFPSCSYHS 60

Query: 61  --VSCQPRLSTAVCSPSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTPSQICQIQAQI--Q 120
              S QP      CSPSST +FSQGFSG  QMG EQ+G IGLN+LTPSQI QIQAQI  Q
Sbjct: 61  PICSSQPNFQPEACSPSSTHVFSQGFSGYNQMGFEQTGSIGLNHLTPSQILQIQAQIHFQ 120

Query: 121 LPPQTMSSLSSSSSSFQSQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIR 180
              Q + +LSS+S    +Q  ++LAPK + MK   SPSKPTKLYRGVRQRHWGKWVAEIR
Sbjct: 121 QQQQQIPNLSSNSHLLHNQRLSYLAPKPVSMKQSASPSKPTKLYRGVRQRHWGKWVAEIR 180

Query: 181 LPKNRTRLWLGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKHQ--FGEFKPLHPSVDA 240
           LPKNRTRLWLGTFDT+EEAALAYDKAAYKLRGEFARLNFPHL+HQ  FG++KPLH SVDA
Sbjct: 181 LPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFPHLRHQGDFGDYKPLHASVDA 240

Query: 241 KLQAICESL----KQGKTEKLCSAEDEKANTSPPPLESNLVVDNYWEPELKSEVETSSSS 300
           KLQAIC+SL    KQGKT +  S  D K N S  P+++    D   + ELK E+E   + 
Sbjct: 241 KLQAICQSLATSQKQGKTGESSSVSDSKTNLS-APMKAIKEEDYSLKGELKREIENLGAE 300

Query: 301 ----SSSSSSPSRSEELSTGSSPESSISFLDFSD-SQWGEGEAFCLEKFPSVEIDWAAL 334
                 SS++ S  E L+  SSP+S ISFLDFSD SQW E E F LEK+PSVEIDWAAL
Sbjct: 301 DYRVEISSAAASSDESLAGSSSPQSEISFLDFSDSSQWDETENFGLEKYPSVEIDWAAL 358

[Close]

BLAST of CmoCh03G008360 vs. TrEMBL
Match: A0A061DJP4_THECC (AP2/ERF domain-containing transcription factor, putative OS=Theobroma cacao GN=TCM_001147 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 3.2e-95
Identity = 224/380 (58.95%), Postives = 260/380 (68.42%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTS------YSSSSSSSSVSC-- 60
           MAAAID+Y   S+ V+S DPF EELMKA +PFMKSA STS       SSSS SSS +C  
Sbjct: 1   MAAAIDMYNSSSSSVFS-DPFREELMKALEPFMKSASSTSPLASSSSSSSSPSSSPTCSF 60

Query: 61  ---------------QPRLSTAVCSPSSTCLFSQ-GFSGIEQ-MGLEQSGPIGLNNLTPS 120
                          QP +    CSPSST LFS  GFS     MG EQ+G IGLN LTPS
Sbjct: 61  FSYPSCSYSQLTSPSQPNMYPEFCSPSSTHLFSNHGFSNYNNLMGFEQTGSIGLNQLTPS 120

Query: 121 QICQIQAQI--QLPPQTMSSLSS--SSSSFQSQYCNFLAPKSIPMKLIGSPSKPTKLYRG 180
           QI QIQAQI  Q   Q    L+S  ++SS Q+Q  NFL+PK++PMK + +PSKPTKLYRG
Sbjct: 121 QILQIQAQIYQQQQQQQQQQLASMATTSSLQNQRLNFLSPKAVPMKRVSTPSKPTKLYRG 180

Query: 181 VRQRHWGKWVAEIRLPKNRTRLWLGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKHQ- 240
           VRQRHWGKWVAEIRLPKNRTRLWLGTFDT+EEAALAYDKAAYKLRGEFARLNFPHLKHQ 
Sbjct: 181 VRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFPHLKHQG 240

Query: 241 ------FGEFKPLHPSVDAKLQAICESL-KQGKTEKLCSAEDEKANT---SPPPLESNLV 300
                 FG++KPLH SVDAKLQAIC+SL KQG + K CS  D K N+   S P +E +  
Sbjct: 241 AHVSGEFGDYKPLHSSVDAKLQAICQSLQKQGNSGKTCSVSDSKPNSVVPSQPKVEFDYP 300

Query: 301 V--DNYWEPELKSEVETSSSSSSSSSSPSRSEELSTGSSPESSISFLDFSDSQWGEGEAF 339
           V  +   +    S+ +  +S SSSSS     E L+  SSPES ISFLDFSDS+W + E F
Sbjct: 301 VKTEELDQSPRFSDPKVENSLSSSSSPELSDESLAGSSSPESDISFLDFSDSKWEDNENF 360

[Close]

BLAST of CmoCh03G008360 vs. TrEMBL
Match: B9T4H7_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0198920 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.2e-89
Identity = 217/379 (57.26%), Postives = 253/379 (66.75%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYSS--DPFSEELMKAFQPFMKSA---VSTSYSSSSSSSSVSCQ-- 60
           MAAAID Y+  +T    S  DP  EEL+KA +PFMKSA    STSY+SSSSS S S    
Sbjct: 1   MAAAIDFYSSSTTPSVFSFIDPGREELLKALEPFMKSASSPTSTSYNSSSSSVSHSTSSD 60

Query: 61  -------------------PRLSTAVCSPSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTP 120
                              P +    CSP ST LFSQGFSG  Q+G EQ+G IGLN+LTP
Sbjct: 61  SLSPSPFYFPSYPSYDSSIPTMYPDFCSPLSTHLFSQGFSGYNQLGFEQTGSIGLNHLTP 120

Query: 121 SQICQIQAQIQLPPQT-MSSLSSSSSSFQS-QYCNFLAPKSIPMKLIGSPSKPTKLYRGV 180
           SQI QIQAQI L  Q  +++L+++S+   + +    LAPK +PMK   SP KPTKLYRGV
Sbjct: 121 SQILQIQAQIHLQQQQQIANLATNSNLIHNDKKLKHLAPKPVPMKQSASPPKPTKLYRGV 180

Query: 181 RQRHWGKWVAEIRLPKNRTRLWLGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKHQ-- 240
           RQRHWGKWVAEIRLPKNRTRLWLGTFDT+EEAALAYDKAAYKLRGEFARLNFPHL+HQ  
Sbjct: 181 RQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFPHLRHQGA 240

Query: 241 -----FGEFKPLHPSVDAKLQAICESL----KQGKTEKLCSAEDEKANTSPPPLESNLVV 300
                FG++KPLH SVDAKLQAIC+SL    KQGK+ +  S  D KANTS     + L  
Sbjct: 241 HVSGEFGDYKPLHSSVDAKLQAICQSLANSQKQGKSGESSSVADSKANTS-----AYLQA 300

Query: 301 DNYWEPELKSEVETSSSSSSSSSSP----SRSEELSTG-SSPESSISFLDFSD--SQWGE 334
               +  +K E+E     +  + SP    S S+E S G SSP+S ISFLDFSD  SQW E
Sbjct: 301 KKEQDCSMKREIEDYKVEAIPTGSPVAPASSSDESSAGSSSPQSEISFLDFSDSSSQWDE 360

[Close]

BLAST of CmoCh03G008360 vs. TrEMBL
Match: E7BLI5_GOSHI (C-repeat binding factor 20 OS=Gossypium hirsutum GN=DREB1C PE=2 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.5e-89
Identity = 213/355 (60.00%), Postives = 244/355 (68.73%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSSSSVSCQPRLSTAV 60
           MAAAID+Y   S     SDPFS ELMKA +PFMKSA STS  SSSSS S   Q  L    
Sbjct: 1   MAAAIDMYNSNSNSSVFSDPFSAELMKALEPFMKSASSTSPLSSSSSYS---QSNLYPEF 60

Query: 61  CSPSSTCLFS-QGFSGIEQ-MGLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSLSSSS 120
           CSP  T L S QGF   +  MG EQ+G IGLN LTPSQI QIQAQI    Q    ++S S
Sbjct: 61  CSPWRTHLCSEQGFCNYQNLMGFEQTGSIGLNQLTPSQILQIQAQIYQQQQQQQEVASKS 120

Query: 121 S--SFQSQYCNFLAPKSIPMKLIGS-PSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWL 180
           +  S ++Q  NFL+PK++PMK + S P KPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWL
Sbjct: 121 TTASLKNQRFNFLSPKAVPMKHVSSTPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWL 180

Query: 181 GTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKHQ-------FGEFKPLHPSVDAKLQAI 240
           GTFDT+EEAALAYDKAAYKLRGEFARLNFPHLKHQ       FG++KPLH +VDAKLQAI
Sbjct: 181 GTFDTAEEAALAYDKAAYKLRGEFARLNFPHLKHQGAHISGEFGDYKPLHSAVDAKLQAI 240

Query: 241 CESL-KQGKTEKLCSAEDEKANTS---PPPLESNLVVDNYWEPELKSEVETSSSSSSSSS 300
           C+SL KQ  + K CS  D         P   E       +  P  K E+ + SSSSSS S
Sbjct: 241 CQSLQKQENSGKGCSVPDSNPKVEFDYPVKREEFDQSPRFASP--KVEMNSLSSSSSSPS 300

Query: 301 SPSRSEE-LSTGSSPESSISFLDFSDSQWGEGEAFCLEKFPSVEIDWAALSQMVE 339
           SP  S+E L+  SSPES I+F DFSDS+W + E F LEK+PSVEIDW A+ ++ E
Sbjct: 301 SPDLSDESLAGSSSPESDITFFDFSDSKWDDNEIFGLEKYPSVEIDWEAIRELSE 350

[Close]

BLAST of CmoCh03G008360 vs. TAIR10
Match: AT1G78080.1 (AT1G78080.1 related to AP2 4)

HSP 1 Score: 230.3 bits (586), Expect = 1.7e-60
Identity = 165/362 (45.58%), Postives = 212/362 (58.56%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSSSSVSCQPRLSTAV 60
           MAAA+++YT       S      ELM A  PF+KS   +  SSS++S+S    P   +  
Sbjct: 1   MAAAMNLYTCSR----SFQDSGGELMDALVPFIKSVSDSPSSSSAASASAFLHPSAFSLP 60

Query: 61  CSPS---STCLFSQGFSGIEQMGLEQSGP-IGLNNLTPSQICQIQAQIQLPPQTMSSLSS 120
             P     +   +Q FS      L+Q+G  IGLNNL+ SQI QIQ+QI  P      L  
Sbjct: 61  PLPGYYPDSTFLTQPFS--YGSDLQQTGSLIGLNNLSSSQIHQIQSQIHHP------LPP 120

Query: 121 SSSSFQSQYCNFLAPKSIPMKLIGS-----------PSKPTKLYRGVRQRHWGKWVAEIR 180
           +  +  + + N L+PK + MK  G            PSKPTKLYRGVRQRHWGKWVAEIR
Sbjct: 121 THHNNNNSFSNLLSPKPLLMKQSGVAGSCFAYGSGVPSKPTKLYRGVRQRHWGKWVAEIR 180

Query: 181 LPKNRTRLWLGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKH-------QFGEFKPLH 240
           LP+NRTRLWLGTFDT+EEAALAYDKAAYKLRG+FARLNFP+L+H        FGE+KPLH
Sbjct: 181 LPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLH 240

Query: 241 PSVDAKLQAICESL----KQGKTEKLCSAEDEKANTSPPPLESNLVVDNYWEPELKSEVE 300
            SVDAKL+AIC+S+    KQ K+ K     ++K ++                P+L  +V+
Sbjct: 241 SSVDAKLEAICKSMAETQKQDKSTKSSKKREKKVSS----------------PDLSEKVK 300

Query: 301 TSSSSSSSSSSP--SRSEELSTGSSPESSISFLDFSD-SQWGEGEAFCLEKFPSVEIDWA 334
              +S S   SP  +  EE + GSSP S ++F D  +  QW   E F LEK+PS EIDW 
Sbjct: 301 AEENSVSIGGSPPVTEFEESTAGSSPLSDLTFADPEEPPQW--NETFSLEKYPSYEIDWD 332

[Close]

BLAST of CmoCh03G008360 vs. TAIR10
Match: AT4G39780.1 (AT4G39780.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 214.5 bits (545), Expect = 9.9e-56
Identity = 160/343 (46.65%), Postives = 194/343 (56.56%), Query Frame = 1


Query: 3   AAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSSSSVSCQPRLSTAVCS 62
           AAID++        ++DPF EELMKA QP         Y++++ SSS    P  S  V  
Sbjct: 2   AAIDMFNS------NTDPFQEELMKALQP---------YTTNTDSSS----PTYSNTV-- 61

Query: 63  PSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSLSSSSSSFQ 122
                            G  Q+  +GLN LTP QI QIQ Q+    Q  + +S +     
Sbjct: 62  ----------------FGFNQTTSLGLNQLTPYQIHQIQNQLN---QRRNIISPN----- 121

Query: 123 SQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTSE 182
                 LAPK +PMK + +     KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT+E
Sbjct: 122 ------LAPKPVPMKNMTAQ----KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAE 181

Query: 183 EAALAYDKAAYKLRGEFARLNFPHLKHQFGE------FKPLHPSVDAKLQAICESLKQGK 242
           EAA+AYD AAYKLRGEFARLNFP  +H+ G       F PLH SVDAKLQ IC+SL++ +
Sbjct: 182 EAAMAYDLAAYKLRGEFARLNFPQFRHEDGYYGGGSCFNPLHSSVDAKLQEICQSLRKTE 241

Query: 243 TEKLCSAEDEKANTSPPPLESNLVVDNYWEPELKSEVETSSSSSSSSSSPSRSEELSTGS 302
              L  +E E     PP  E             +SE     S  +S S  S  E     S
Sbjct: 242 DIDLPCSETE---LFPPKTEYQ-----------ESEYGFLRSDENSFSDESHVE----SS 271

Query: 303 SPESSI-SFLDFSDSQWGEGEAFCLEKFPSVEIDWAALSQMVE 339
           SPES I +FLDFSDS + E  +F LEKFPSVEIDW A+S++ E
Sbjct: 302 SPESGITTFLDFSDSGFDEIGSFGLEKFPSVEIDWDAISKLSE 271

[Close]

BLAST of CmoCh03G008360 vs. TAIR10
Match: AT2G22200.1 (AT2G22200.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 195.3 bits (495), Expect = 6.2e-50
Identity = 129/263 (49.05%), Postives = 166/263 (63.12%), Query Frame = 1


Query: 80  GLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSLSSSSSSFQSQYCNFLAPKSIPMK-L 139
           G+ +S P+GLN LTP QI QIQ Q+     T+S+LS               P  I MK L
Sbjct: 16  GVNKSMPLGLNQLTPYQIHQIQNQLNHRRSTISNLS---------------PNRIRMKNL 75

Query: 140 IGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTSEEAALAYDKAAYKLRGE 199
             S SK   LYRGVRQRHWGKWVAEIRLPKNRTRLWLGTF+T+E+AALAYD+AA++LRG+
Sbjct: 76  TPSTSKTKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGD 135

Query: 200 FARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQGKTEKLCSAEDEKANTS----PPP 259
            A+LNFP+L H+  +  PL  SVD KLQAIC+SL+  KTE++CS  D+    S       
Sbjct: 136 IAKLNFPNLIHE--DMNPLPSSVDTKLQAICKSLR--KTEEICSVSDQTKEYSVYSVSDK 195

Query: 260 LESNLVVDNYWEPELKSEVETSSSSSSSSSSPSRS-EELSTGSSPESSISFLDFSDSQWG 319
            E  L     + P+ +  +ET+  S+ S  S   S  + S      S  +FLDFSD+++ 
Sbjct: 196 TELFLPKAELFLPK-REHLETNELSNESPRSDETSLLDESQAEYSSSDKTFLDFSDTEFE 255

Query: 320 EGEAFCLEKFPSVEIDWAALSQM 337
           E  +F L KFPSVEIDW A+S++
Sbjct: 256 EIGSFGLRKFPSVEIDWDAISKL 258

[Close]

BLAST of CmoCh03G008360 vs. TAIR10
Match: AT1G22190.1 (AT1G22190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 186.0 bits (471), Expect = 3.8e-47
Identity = 109/217 (50.23%), Postives = 141/217 (64.98%), Query Frame = 1


Query: 125 YCNFLAPKSIPMKLIG-SPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTSEE 184
           + + L+PK + MK  G S +KPTKLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDT+EE
Sbjct: 58  FSHHLSPKPVSMKQTGTSAAKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEE 117

Query: 185 AALAYDKAAYKLRGEFARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQGKTEKLCSA 244
           AALAYDKAAYKLRG+FARLNFP L+H   E++PL  SVDAKL+AIC++L +   +++ S 
Sbjct: 118 AALAYDKAAYKLRGDFARLNFPDLRHN-DEYQPLQSSVDAKLEAICQNLAETTQKQVRST 177

Query: 245 EDEKANTSPPPLESNLVVDNYWEPELKSEVETSSSSSSSSSSPSRSEELSTG--SSPESS 304
           +   +      +   L  ++Y               SS+ SSP  +E   +G  SSP S 
Sbjct: 178 KKSSSRKRSSTVAVKLPEEDY---------------SSAGSSPLLTESYGSGGSSSPLSE 237

Query: 305 ISFLDFSDS---QWGEGEAFCLEKFPSVEIDWAALSQ 336
           ++F D  +     W E     LEK+PS EIDW ++ Q
Sbjct: 238 LTFGDTEEEIQPPWNEN---ALEKYPSYEIDWDSILQ 255

[Close]

BLAST of CmoCh03G008360 vs. TAIR10
Match: AT5G65130.1 (AT5G65130.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 184.9 bits (468), Expect = 8.4e-47
Identity = 135/319 (42.32%), Postives = 180/319 (56.43%), Query Frame = 1


Query: 21  FSEELMKAFQPFMKSAVSTSYSSSSSSSSVSCQPRLSTAVCSPSSTCLFSQGFSGIEQMG 80
           + +E M+A +PFMK        +SSSS+S S  P+  T    P++  +            
Sbjct: 8   YVDEFMEALEPFMKV-------TSSSSTSNSSNPKPLTPNFIPNNDQVLPVS-------- 67

Query: 81  LEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSLSSSSSSFQSQYCNFLAPKSIPMKLIG 140
             Q+GPIGLN LTP+QI QIQ ++ L  Q  S   + S        + L  K   MK I 
Sbjct: 68  -NQTGPIGLNQLTPTQILQIQTELHLR-QNQSRRRAGS--------HLLTAKPTSMKKID 127

Query: 141 SPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTSEEAALAYDKAAYKLRGEFA 200
             +KP KLYRGVRQR WGKWVAEIRLPKNRTRLWLGTF+T++EAALAYD+AA+K+RG+ A
Sbjct: 128 VATKPVKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNA 187

Query: 201 RLNFPHLKHQFGEFKP-LHPSVDAKLQAICESLKQGKTEKLCSAEDEKANTSPPPLESNL 260
           RLNFP +  Q G +K  L PS++AK+++IC S        L   + EK N      ++  
Sbjct: 188 RLNFPDIVRQ-GHYKQILSPSINAKIESICNS------SDLPLPQIEKQN------KTEE 247

Query: 261 VVDNYWEPELKSEVETSSSSSSSSSSPSRSEELSTGSSPESSISFLDFSDSQWGEGEAFC 320
           V+  + +PE + E         S            GSSPES I+ LDFS     E E+F 
Sbjct: 248 VLSGFSKPEKEPEFGEIYGCGYS------------GSSPESDITLLDFSSDCVKEDESFL 276

Query: 321 --LEKFPSVEIDWAALSQM 337
             L K+PS+EIDW A+ ++
Sbjct: 308 MGLHKYPSLEIDWDAIEKL 276

[Close]

BLAST of CmoCh03G008360 vs. NCBI nr
Match: gi|659080103|ref|XP_008440612.1| (PREDICTED: ethylene-responsive transcription factor ERF060 [Cucumis melo])

HSP 1 Score: 523.5 bits (1347), Expect = 2.8e-145
Identity = 285/350 (81.43%), Postives = 299/350 (85.43%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSS--------SSVSC 60
           MAAAIDVY+G ST VY SDPFSEELMKA QPFMKSA+STS SSSSSS         SVS 
Sbjct: 1   MAAAIDVYSGTSTPVYYSDPFSEELMKALQPFMKSAISTSSSSSSSSYSPSPPPHPSVSS 60

Query: 61  QPRLSTAVCSPSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMS 120
           QPRL    CSPSST LFSQGFSGIEQMG EQSGPIGLNN TPSQI QIQAQIQLP  TMS
Sbjct: 61  QPRLIPDFCSPSSTRLFSQGFSGIEQMGFEQSGPIGLNNPTPSQILQIQAQIQLPSPTMS 120

Query: 121 SLSSSSSSFQSQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTR 180
           S SSSSSSFQSQY NFL PKS PMK IGSP KPTKLYRGVRQRHWGKWVAEIRLPKNRTR
Sbjct: 121 SFSSSSSSFQSQYHNFLTPKSFPMKHIGSPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTR 180

Query: 181 LWLGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKHQFGEFKPLHPSVDAKLQAICESL 240
           LWLGTFDT+EEAALAYD+AAYKLRG+FARLNFPHLKHQFG+FKPLHPSVDAKLQ+IC+SL
Sbjct: 181 LWLGTFDTAEEAALAYDQAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQSICQSL 240

Query: 241 KQGKTEKLCSAEDEKANTSPPPLESNLVVDNYWEPELKSEVETSSSSSSSSSSPSRSEEL 300
           KQGKTE +CS EDEK  T P P ESN  V+N+WEPELKSEVETS SSSSSS S S     
Sbjct: 241 KQGKTE-VCSVEDEKPTTIPLPSESNSAVNNFWEPELKSEVETSFSSSSSSPSRSEDYST 300

Query: 301 STGSSPESSISFLDFSDSQWGEG-EAFCLEKFPSVEIDWAALSQMVEWEC 342
           STGSSP+SSISFLDFSDSQWGEG EAFCLEKFPS+EIDWAALSQ+ E EC
Sbjct: 301 STGSSPDSSISFLDFSDSQWGEGVEAFCLEKFPSIEIDWAALSQLAESEC 349

[Close]

BLAST of CmoCh03G008360 vs. NCBI nr
Match: gi|449451453|ref|XP_004143476.1| (PREDICTED: ethylene-responsive transcription factor ERF056 [Cucumis sativus])

HSP 1 Score: 503.8 bits (1296), Expect = 2.3e-139
Identity = 279/348 (80.17%), Postives = 293/348 (84.20%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSSS------SVSCQP 60
           MAA IDVY G ST VY SDPFSEELMKA QPFMKSA+STS S S SSS      SVS QP
Sbjct: 1   MAAVIDVYGGTSTPVYYSDPFSEELMKALQPFMKSAISTSSSFSPSSSPSPPHPSVSSQP 60

Query: 61  RLSTAVCSPSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSL 120
           RL    CSPSST LFSQGFSGIEQMG EQSGPIGLNN TPSQI QIQAQIQLP  TMSS 
Sbjct: 61  RLIPDFCSPSSTRLFSQGFSGIEQMGFEQSGPIGLNNPTPSQILQIQAQIQLPSPTMSSF 120

Query: 121 SSSSSSFQSQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLW 180
           SSSSS FQSQY NFL PKS PMK +GSP KP KLYRGVRQRHWGKWVAEIRLPKNRTRLW
Sbjct: 121 SSSSS-FQSQYHNFLTPKSFPMKHMGSPPKPNKLYRGVRQRHWGKWVAEIRLPKNRTRLW 180

Query: 181 LGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQ 240
           LGTFDT+EEAALAYD+AAYKLRG+FARLNFPHLKHQFG+FKPLHPSVDAKLQ+IC+SLKQ
Sbjct: 181 LGTFDTAEEAALAYDQAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQSICQSLKQ 240

Query: 241 GKTEKLCSAEDEKANTSPPPLESNLVVDNYWEPELKSEVETSSSSSSSSSSPSRSEELST 300
           GKTE +CS EDEK  T P P ESN  V+N+ E ELKSEVETSSSSSSSS S S     ST
Sbjct: 241 GKTE-VCSVEDEKPTTIPLPSESNSAVNNFCELELKSEVETSSSSSSSSPSRSEDYSTST 300

Query: 301 GSSPESSISFLDFSDSQWGEG-EAFCLEKFPSVEIDWAALSQMVEWEC 342
           GSSP+SSISFLDFSDSQWGEG EAFCLEKFPS+EIDWAALSQ+ E EC
Sbjct: 301 GSSPDSSISFLDFSDSQWGEGVEAFCLEKFPSIEIDWAALSQLAESEC 346

[Close]

BLAST of CmoCh03G008360 vs. NCBI nr
Match: gi|700193559|gb|KGN48763.1| (AP2/ERF domain-containing transcription factor [Cucumis sativus])

HSP 1 Score: 397.5 bits (1020), Expect = 2.3e-107
Identity = 215/269 (79.93%), Postives = 225/269 (83.64%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSSS------SVSCQP 60
           MAA IDVY G ST VY SDPFSEELMKA QPFMKSA+STS S S SSS      SVS QP
Sbjct: 1   MAAVIDVYGGTSTPVYYSDPFSEELMKALQPFMKSAISTSSSFSPSSSPSPPHPSVSSQP 60

Query: 61  RLSTAVCSPSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSL 120
           RL    CSPSST LFSQGFSGIEQMG EQSGPIGLNN TPSQI QIQAQIQLP  TMSS 
Sbjct: 61  RLIPDFCSPSSTRLFSQGFSGIEQMGFEQSGPIGLNNPTPSQILQIQAQIQLPSPTMSSF 120

Query: 121 SSSSSSFQSQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLW 180
           SSSSS FQSQY NFL PKS PMK +GSP KP KLYRGVRQRHWGKWVAEIRLPKNRTRLW
Sbjct: 121 SSSSS-FQSQYHNFLTPKSFPMKHMGSPPKPNKLYRGVRQRHWGKWVAEIRLPKNRTRLW 180

Query: 181 LGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQ 240
           LGTFDT+EEAALAYD+AAYKLRG+FARLNFPHLKHQFG+FKPLHPSVDAKLQ+IC+SLKQ
Sbjct: 181 LGTFDTAEEAALAYDQAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQSICQSLKQ 240

Query: 241 GKTEKLCSAEDEKANTSPPPLESNLVVDN 264
           GKTE +CS EDEK  T P P ESN  + N
Sbjct: 241 GKTE-VCSVEDEKPTTIPLPSESNSAILN 267

[Close]

BLAST of CmoCh03G008360 vs. NCBI nr
Match: gi|802537176|ref|XP_012093083.1| (PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Jatropha curcas])

HSP 1 Score: 358.2 bits (918), Expect = 1.6e-95
Identity = 220/359 (61.28%), Postives = 251/359 (69.92%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYS-SDPFSEELMKAFQPFMKSAVSTSYSSSSSSSS---------- 60
           MAAAID+Y   +  V+S  DP  EELMKA +PFMKSA  TS SSS S S           
Sbjct: 1   MAAAIDIYNSKTAPVFSVMDPCREELMKALEPFMKSASPTSPSSSFSLSPPPFPSCSYHS 60

Query: 61  --VSCQPRLSTAVCSPSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTPSQICQIQAQI--Q 120
              S QP      CSPSST +FSQGFSG  QMG EQ+G IGLN+LTPSQI QIQAQI  Q
Sbjct: 61  PICSSQPNFQPEACSPSSTHVFSQGFSGYNQMGFEQTGSIGLNHLTPSQILQIQAQIHFQ 120

Query: 121 LPPQTMSSLSSSSSSFQSQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIR 180
              Q + +LSS+S    +Q  ++LAPK + MK   SPSKPTKLYRGVRQRHWGKWVAEIR
Sbjct: 121 QQQQQIPNLSSNSHLLHNQRLSYLAPKPVSMKQSASPSKPTKLYRGVRQRHWGKWVAEIR 180

Query: 181 LPKNRTRLWLGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKHQ--FGEFKPLHPSVDA 240
           LPKNRTRLWLGTFDT+EEAALAYDKAAYKLRGEFARLNFPHL+HQ  FG++KPLH SVDA
Sbjct: 181 LPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFPHLRHQGDFGDYKPLHASVDA 240

Query: 241 KLQAICESL----KQGKTEKLCSAEDEKANTSPPPLESNLVVDNYWEPELKSEVETSSSS 300
           KLQAIC+SL    KQGKT +  S  D K N S  P+++    D   + ELK E+E   + 
Sbjct: 241 KLQAICQSLATSQKQGKTGESSSVSDSKTNLS-APMKAIKEEDYSLKGELKREIENLGAE 300

Query: 301 ----SSSSSSPSRSEELSTGSSPESSISFLDFSD-SQWGEGEAFCLEKFPSVEIDWAAL 334
                 SS++ S  E L+  SSP+S ISFLDFSD SQW E E F LEK+PSVEIDWAAL
Sbjct: 301 DYRVEISSAAASSDESLAGSSSPQSEISFLDFSDSSQWDETENFGLEKYPSVEIDWAAL 358

[Close]

BLAST of CmoCh03G008360 vs. NCBI nr
Match: gi|590707399|ref|XP_007047994.1| (AP2/ERF domain-containing transcription factor, putative [Theobroma cacao])

HSP 1 Score: 356.7 bits (914), Expect = 4.6e-95
Identity = 224/380 (58.95%), Postives = 260/380 (68.42%), Query Frame = 1


Query: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTS------YSSSSSSSSVSC-- 60
           MAAAID+Y   S+ V+S DPF EELMKA +PFMKSA STS       SSSS SSS +C  
Sbjct: 1   MAAAIDMYNSSSSSVFS-DPFREELMKALEPFMKSASSTSPLASSSSSSSSPSSSPTCSF 60

Query: 61  ---------------QPRLSTAVCSPSSTCLFSQ-GFSGIEQ-MGLEQSGPIGLNNLTPS 120
                          QP +    CSPSST LFS  GFS     MG EQ+G IGLN LTPS
Sbjct: 61  FSYPSCSYSQLTSPSQPNMYPEFCSPSSTHLFSNHGFSNYNNLMGFEQTGSIGLNQLTPS 120

Query: 121 QICQIQAQI--QLPPQTMSSLSS--SSSSFQSQYCNFLAPKSIPMKLIGSPSKPTKLYRG 180
           QI QIQAQI  Q   Q    L+S  ++SS Q+Q  NFL+PK++PMK + +PSKPTKLYRG
Sbjct: 121 QILQIQAQIYQQQQQQQQQQLASMATTSSLQNQRLNFLSPKAVPMKRVSTPSKPTKLYRG 180

Query: 181 VRQRHWGKWVAEIRLPKNRTRLWLGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKHQ- 240
           VRQRHWGKWVAEIRLPKNRTRLWLGTFDT+EEAALAYDKAAYKLRGEFARLNFPHLKHQ 
Sbjct: 181 VRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFPHLKHQG 240

Query: 241 ------FGEFKPLHPSVDAKLQAICESL-KQGKTEKLCSAEDEKANT---SPPPLESNLV 300
                 FG++KPLH SVDAKLQAIC+SL KQG + K CS  D K N+   S P +E +  
Sbjct: 241 AHVSGEFGDYKPLHSSVDAKLQAICQSLQKQGNSGKTCSVSDSKPNSVVPSQPKVEFDYP 300

Query: 301 V--DNYWEPELKSEVETSSSSSSSSSSPSRSEELSTGSSPESSISFLDFSDSQWGEGEAF 339
           V  +   +    S+ +  +S SSSSS     E L+  SSPES ISFLDFSDS+W + E F
Sbjct: 301 VKTEELDQSPRFSDPKVENSLSSSSSPELSDESLAGSSSPESDISFLDFSDSKWEDNENF 360

The following BLAST results are available for this feature:

BLAST of CmoCh03G008360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAP24_ARATH	3.1e-59	45.58	Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-...	[more]
ERF60_ARATH	1.8e-54	46.65	Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF06...	[more]
ERF56_ARATH	1.1e-48	49.05	Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF05...	[more]
RA213_ARATH	6.7e-46	50.23	Ethylene-responsive transcription factor RAP2-13 OS=Arabidopsis thaliana GN=RAP2...	[more]
ERF57_ARATH	1.5e-45	42.32	Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF05...	[more]

BLAST of CmoCh03G008360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGT3_CUCSA	1.6e-107	79.93	AP2/ERF domain-containing transcription factor OS=Cucumis sativus GN=Csa_6G50055...	[more]
A0A067LEQ3_JATCU	1.1e-95	61.28	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24071 PE=4 SV=1	[more]
A0A061DJP4_THECC	3.2e-95	58.95	AP2/ERF domain-containing transcription factor, putative OS=Theobroma cacao GN=T...	[more]
B9T4H7_RICCO	1.2e-89	57.26	DNA binding protein, putative OS=Ricinus communis GN=RCOM_0198920 PE=4 SV=1	[more]
E7BLI5_GOSHI	1.5e-89	60.00	C-repeat binding factor 20 OS=Gossypium hirsutum GN=DREB1C PE=2 SV=1	[more]

BLAST of CmoCh03G008360 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78080.1	1.7e-60	45.58	related to AP2 4	[more]
AT4G39780.1	9.9e-56	46.65	Integrase-type DNA-binding superfamily protein	[more]
AT2G22200.1	6.2e-50	49.05	Integrase-type DNA-binding superfamily protein	[more]
AT1G22190.1	3.8e-47	50.23	Integrase-type DNA-binding superfamily protein	[more]
AT5G65130.1	8.4e-47	42.32	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CmoCh03G008360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080103\|ref\|XP_008440612.1\|	2.8e-145	81.43	PREDICTED: ethylene-responsive transcription factor ERF060 [Cucumis melo]	[more]
gi\|449451453\|ref\|XP_004143476.1\|	2.3e-139	80.17	PREDICTED: ethylene-responsive transcription factor ERF056 [Cucumis sativus]	[more]
gi\|700193559\|gb\|KGN48763.1\|	2.3e-107	79.93	AP2/ERF domain-containing transcription factor [Cucumis sativus]	[more]
gi\|802537176\|ref\|XP_012093083.1\|	1.6e-95	61.28	PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Jatropha curcas...	[more]
gi\|590707399\|ref\|XP_007047994.1\|	4.6e-95	58.95	AP2/ERF domain-containing transcription factor, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G008360.1	CmoCh03G008360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 171..187 score: 7.5E-11coord: 149..160 score: 7.5
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 148..206 score: 6.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 149..198 score: 1.3
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 148..211 score: 8.0
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 148..205 score: 2
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 148..206 score: 3.92
None	No IPR available	PANTHER	PTHR31657	FAMILY NOT NAMED	coord: 18..338 score: 3.1E
None	No IPR available	PANTHER	PTHR31657:SF9	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED	coord: 18..338 score: 3.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G008360	Cucsa.104510	Cucumber (Gy14) v1	cgycmoB0227
CmoCh03G008360	CmaCh07G005340	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G008360	CmaCh05G004890	Cucurbita maxima (Rimu)	cmacmoB784
CmoCh03G008360	Cla014156	Watermelon (97103) v1	cmowmB623
CmoCh03G008360	Cla022083	Watermelon (97103) v1	cmowmB609
CmoCh03G008360	Csa6G500550	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G008360	MELO3C007769	Melon (DHL92) v3.5.1	cmomeB605
CmoCh03G008360	ClCG01G018900	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G008360	ClCG08G010990	Watermelon (Charleston Gray)	cmowcgB600
CmoCh03G008360	CSPI06G30360	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G008360	Lsi08G009530	Bottle gourd (USVL1VR-Ls)	cmolsiB607
CmoCh03G008360	Lsi01G007540	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G008360	Cp4.1LG19g09720	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G008360	Cp4.1LG10g01290	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G008360	Cp4.1LG07g01250	Cucurbita pepo (Zucchini)	cmocpeB639
CmoCh03G008360	MELO3C007769.2	Melon (DHL92) v3.6.1	cmomedB694
CmoCh03G008360	CsaV3_6G045580	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G008360	Cla97C08G153920	Watermelon (97103) v2	cmowmbB672
CmoCh03G008360	Cla97C01G018370	Watermelon (97103) v2	cmowmbB642
CmoCh03G008360	Bhi03G000927	Wax gourd	cmowgoB0792
CmoCh03G008360	Bhi04G000611	Wax gourd	cmowgoB0774
CmoCh03G008360	CsGy6G029860	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G008360	Carg00687	Silver-seed gourd	carcmoB0551
CmoCh03G008360	Carg16003	Silver-seed gourd	carcmoB1028

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G008360	CmoCh05G005110	Cucurbita moschata (Rifu)	cmocmoB452
CmoCh03G008360	CmoCh07G005390	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G008360	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G008360	Cucurbita maxima (Rimu)	cmacmoB727
CmoCh03G008360	Cucurbita pepo (Zucchini)	cmocpeB613
CmoCh03G008360	Cucurbita moschata (Rifu)	cmocmoB451