CmoCh03G006460 (gene) Cucurbita moschata (Rifu)

NameCmoCh03G006460
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr03 : 5879401 .. 5879824 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCCGATCCAGAATGTGAGGGCGCATATAGCAATGCAAAGGCCTCGAACTCGAGTTGGAAAGATCTCGGAGCAGAGGATGTTGGGGACTGGACCAAAGCCCATGACAAAGCAACAGAAGTAAGCTACAACACTGATGGTTGAGATTGTTGCATTGGCAACAGACCCCATGTTCACCAAGCTACCAATGACAAGCACGATCAGTGATATTATAAGTACCGGAATGGTAGATAGCAGAAGAGACCTGCAAGAAAAATAAAGCTTCATGGTCATAATTGAGTCACAGGAGCAACTCAAAGACCATTTGAACAACAGTGGATTGTTATTTTTGTTTACCTTCTACCAGCTACGTCCATCAGCCTCATGGCAATGCCTATGGAAGGAAGCATCAGAAATGTAGTCAGAGCACTAATGAGCAGTGA

mRNA sequence

ATGTCTCCGATCCAGAATGTGAGGGCGCATATAGCAATGCAAAGGCCTCGAACTCGAGTTGGAAAGATCTCGGAGCAGAGGATGTTGGGGACTGGACCAAAGCCCATGACAAAGCAACAGAACTACGTCCATCAGCCTCATGGCAATGCCTATGGAAGGAAGCATCAGAAATGTAGTCAGAGCACTAATGAGCAGTGA

Coding sequence (CDS)

ATGTCTCCGATCCAGAATGTGAGGGCGCATATAGCAATGCAAAGGCCTCGAACTCGAGTTGGAAAGATCTCGGAGCAGAGGATGTTGGGGACTGGACCAAAGCCCATGACAAAGCAACAGAACTACGTCCATCAGCCTCATGGCAATGCCTATGGAAGGAAGCATCAGAAATGTAGTCAGAGCACTAATGAGCAGTGA
BLAST of CmoCh03G006460 vs. TrEMBL
Match: J3LIR7_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.5e-06
Identity = 29/42 (69.05%), Postives = 30/42 (71.43%), Query Frame = 1

Query: 1  MSPIQNVRAHIAMQRPRTRVGKISEQRMLGTGPKPMTKQQNY 43
          MS  Q     +AMQRPRTRVGKIS  RMLG GP PMTKQQ Y
Sbjct: 1  MSASQKASEQMAMQRPRTRVGKISAHRMLGMGPNPMTKQQRY 42

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
J3LIR7_ORYBR4.5e-0669.05Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G006460.1CmoCh03G006460.1mRNA