CmoCh03G006170 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G006170
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SNF1 protein kinase subunit beta-2
Location	Cmo_Chr03 : 5762437 .. 5766049 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTGGGGATCGGGAGCAGGACGACTTTGTCAACCATGACGTGACGATGATTCCTGTTATCCTTAAAAGCCCATCAACCTTGGGCCACCATTCGATCTTCCTGACTCATCGGAGAAAAGATTAAGAAGGTTAATCTTTGCGCTTTGTTCTTTTTAGCATCCTTCTCGTAAGAACACATATCCGAATCCTTCAATTTGTTTGGGTTTTCAATTTTATGCCACTTTGATTTCCTTGCAATTTCTGCGGATGAACTATGAATCTTAGGATTATGAGGGTTTCTCTGTTTATGTCGTCCCTAATCACTTGATTGTTCTTTTTCTGTGGAGAATCGTTTTTCCACCCATTTTCATTCTTTTTCGCCCACCCACAAAGGATTCCGGGTTTTATTTATTTATTTATTTATTTACTTTCCATTTATTCTTGTTCGTATTAATGGGGAATGTGAACGGGAGAGAAGATGAGGACGCTAATCCATCTGGGGTTGAAGAAGAAGATGAAGAAGTCGGTAGCCGACGGAGGAGTTTGCCGGACGGCCTGGCTGCGCCTCCTGATGCTCACCTTGACTACCTCACTGGCGATCCGCCTACAGAGCTGATGGGTCATTCTCCTCCTCGTAGCCCTCGCGCCATTCCATCTCCATTGATGTTTACTCCCCAAGTGAGTTAGTTCCCTGAATTTTGCCTTTCATTCCTGGTCGTGAATTCCTCCAGTTCATTGAAAATTGATATACGGTGGGGATGTTTGGTGTTGTATGTAATTGGAAATTCCTTTCGTTTCCTTTTTCGATAAGTTTCTTGCGAGGAATCTTGGCCTTTTCGTGTCGCTACTTTACCTGCACGGTATGTGTTTGATGTAAGTCCTACATGAATAGATGGACGATTTGGTGAATCTACAGGGCTATTGTTACACTATAATTCTCTGTGCAAATTCGATCGACTGCCTCTTATCTTTTATCTTCCCATTTCAGTGTTGTGCTGTATAAGCTTTCTTGAATCTTTGTCCAGAATGCATCTTGATTTTAGGGTTCAAAATACGCTTGAACTTTGGTGTAGATTTCAATCATGAAAAAGCACCTTGGATAGTTTTCTGTAATAATAAAAACTGGAAAGTGTTCATAGCATCATTTACAATTCAAGCTCAACTATATAGAGATTAAGATCATTGTTAGTTTCAAGTTAAAAGATGTTCATATCGTTAACTCAACCAACATGAACGATATTATAAACGATGGCGTACAAATTTTCATTCACCATTTTAATGAAAAAGTCTCTATAGGTATTTTTTGGAACAGTTTCAATATTATAACTCATCTAACTTGCAAATTCACTTTGAATGCCTAGAAAGTTACCCATTTTGGATTCTGGAAAACAGTCAAAGATGCTGTTGAGCTATAACCATAATGTTCCTCTTCAGTTTTGATCAATAATGTTACTATAGATTGAGCTGTGAATCATTCTGTGATCTCTGCACTGGTTTCTTTTCTTCAGTGTCTGACCTTCTGTCCTTGCGAGCCATGATTTTGAGTACTTCTATCTGTCTTAACAGGTACCGGTTGTTCCACTGCCAAGACCTGATGAGTTGCCCAATTCAAGCGAGTCCTGGATGAATAACAGTTCGTTGTTTGACGACGTGAGCAGTGAACAAGGAATCCCAACGATGATTACCTGGAGTCATGGAGGCAAGGAAGTAGCTGTTGAGGGATCTTGGGACAACTGGAAATCGAAGTTTGTTGCTCTGTTCTCTCAATTTGTAGTTCGTTTCTTACTCGATTGACTGACCGCCATCTGATACCCAATGTCTTCTTCCTGATCAGAATACCGTTGCAGAGATCTGGGAAGGACTTCACGATTATGAAGGTTTTGTCTTCTGGTGTTTACCAGTATAGGTTTATTGCTGATGGACAATGGAGATATGCTCCTGACTTGCCTTGGGCCCAAGATGATGCAGGCAATGCTTACAATATCTTGGACTTGCAGGTAAAAATCTCTTTCTTGTTGACCATCTCATACCCTCTTACTATCCTGATATGAAAGTTGTCGATGAAACTCGGTTTCGTGAGATGCATGAAAGTTGATCATTTTGGTTGTTTTTGTTTAAAATTACCAACAAGTATGGAGCTTTCTGATCTAGTGCTCAGGGTTGAGAGTCAAATTCCTCTCGTTCTACCTTGGTGATGCTATTTGTAACAGCCCAAACCCACCACTGGCCGATATTGTTCTCTTTGGACTTTTCCTTTCGGGCTTCCTTCAAGGTTTTTAAAATACGTCTACTAGGGAGAGGTTTCCACACGCCCATAAAGAATGCTTCGTTCTCCTCTCCAACGTGGAATCTCACAATCCATCTCTCTTAGGGGCCAGCATTCTCGCTGGCACTCTTTCCCTTCTCCAATCGATGTGGGATCCCCTCATCCACCTTCCTTCGAGGCCCAGCGTCCTTGCTGGCACACCGCCTCGTGTCCACCCCCCTTCAGGGCTCAACCTCCTTGCTGGCACATCGCCCAATGTCTAGCTCTGTTACTATTTGTAACGGCTCAAACCAACCGCCAGCAAATATTGCCCTCTTTGGGCTTTTCCCTGTCGGGGTTACCCTCAACGTTTTTAAAACGTGTATGCTATAGAAAAGTTTCCACACCTTTATAAAGAATACTTCGTTCTCCTCTTCAACCGATGTGGGATCTCACACGCTTTTTTAAAAATCCAAAATAGTGAGTTTCAAGATAACTTTGTAAGCATGTGTTTATACCATCATATGGATGACTCTCTCTCTCTCTCGTTTTTAGTCAAGAAGCTTGATAATCAACTGAGCTCAATTTATGCTTATGTGACACTTTGATGCAGCATTTGATATATATATTGCAAAAATAATCGTGTTTTTTTCTTTCATATCTGGGTGTTGTATTTGGAATAATAGAAGCTTGTAGAGCTTATTTTTTAATGGATGAATGCTATAGGACTATGTCCCAGAAGACATCGAAAGCATTTCAAGCTTTGAACCTCCTCAGTCCCCAGAGTCCAGTTACAGCAGTTTGCAGCTTGGATCTGAAGATTTTTCAAAGGAGCCACCACTGGCTCCTCCCCACTTGAAAACCACACTGCTCGACATGCCTTCCCCATACAATGAAATCTTACCTCCTATATCAAGACCTCAGCATGTTGTGCTGAATCATCTTTACATGCAGAAGGAAAGGGGTGGCCCCTCCGTCGTCGCACTCGGGATGACTCACCGGTTCCTTGCCAAGTACGTAACCGTCGTGCTCTATAAATCCTTGCAGAGACAACGTTAGAATAGGCATCCTGTGTAATCAAATTCACAATCTAAACCCATTTTTCCTTACTGGAGCTCTATATGGTGTCGATGCCATTTCGTTTAAACACTTCTGAATCAACCACGAAGTCTGAATGGATCGTTCTTCAAGATTGTACCTTACATAATACCATCTCTCCTTTTTCTATCTGACATGCATTTTATCCAGTTGCTAAAATTTCCCCTTCCTTGTAGCAGGATCATCTCACTCCCTCTCCCTCTCCCATTTGTCTCGATGGTTGCAAGTTTTGCTAATGATGGTTGCAAGTTTTGCTAATGAATACAAATGCAGCTTTGTAATAGTTCATAG

mRNA sequence

GGGTGGGGATCGGGAGCAGGACGACTTTGTCAACCATGACGTGACGATGATTCCTGTTATCCTTAAAAGCCCATCAACCTTGGGCCACCATTCGATCTTCCTGACTCATCGGAGAAAAGATTAAGAAGGTTAATCTTTGCGCTTTGTTCTTTTTAGCATCCTTCTCGTAAGAACACATATCCGAATCCTTCAATTTGTTTGGGTTTTCAATTTTATGCCACTTTGATTTCCTTGCAATTTCTGCGGATGAACTATGAATCTTAGGATTATGAGGGTTTCTCTGTTTATGTCGTCCCTAATCACTTGATTGTTCTTTTTCTGTGGAGAATCGTTTTTCCACCCATTTTCATTCTTTTTCGCCCACCCACAAAGGATTCCGGGTTTTATTTATTTATTTATTTATTTACTTTCCATTTATTCTTGTTCGTATTAATGGGGAATGTGAACGGGAGAGAAGATGAGGACGCTAATCCATCTGGGGTTGAAGAAGAAGATGAAGAAGTCGGTAGCCGACGGAGGAGTTTGCCGGACGGCCTGGCTGCGCCTCCTGATGCTCACCTTGACTACCTCACTGGCGATCCGCCTACAGAGCTGATGGGTCATTCTCCTCCTCGTAGCCCTCGCGCCATTCCATCTCCATTGATGTTTACTCCCCAAGTACCGGTTGTTCCACTGCCAAGACCTGATGAGTTGCCCAATTCAAGCGAGTCCTGGATGAATAACAGTTCGTTGTTTGACGACGTGAGCAGTGAACAAGGAATCCCAACGATGATTACCTGGAGTCATGGAGGCAAGGAAGTAGCTGTTGAGGGATCTTGGGACAACTGGAAATCGAAAATACCGTTGCAGAGATCTGGGAAGGACTTCACGATTATGAAGGTTTTGTCTTCTGGTGTTTACCAGTATAGGTTTATTGCTGATGGACAATGGAGATATGCTCCTGACTTGCCTTGGGCCCAAGATGATGCAGGCAATGCTTACAATATCTTGGACTTGCAGGACTATGTCCCAGAAGACATCGAAAGCATTTCAAGCTTTGAACCTCCTCAGTCCCCAGAGTCCAGTTACAGCAGTTTGCAGCTTGGATCTGAAGATTTTTCAAAGGAGCCACCACTGGCTCCTCCCCACTTGAAAACCACACTGCTCGACATGCCTTCCCCATACAATGAAATCTTACCTCCTATATCAAGACCTCAGCATGTTGTGCTGAATCATCTTTACATGCAGAAGGAAAGGGGTGGCCCCTCCGTCGTCGCACTCGGGATGACTCACCGGTTCCTTGCCAAGTACGTAACCGTCGTGCTCTATAAATCCTTGCAGAGACAACGTTAGAATAGGCATCCTGTGTAATCAAATTCACAATCTAAACCCATTTTTCCTTACTGGAGCTCTATATGGTGTCGATGCCATTTCGTTTAAACACTTCTGAATCAACCACGAAGTCTGAATGGATCGTTCTTCAAGATTGTACCTTACATAATACCATCTCTCCTTTTTCTATCTGACATGCATTTTATCCAGTTGCTAAAATTTCCCCTTCCTTGTAGCAGGATCATCTCACTCCCTCTCCCTCTCCCATTTGTCTCGATGGTTGCAAGTTTTGCTAATGATGGTTGCAAGTTTTGCTAATGAATACAAATGCAGCTTTGTAATAGTTCATAG

Coding sequence (CDS)

ATGGGGAATGTGAACGGGAGAGAAGATGAGGACGCTAATCCATCTGGGGTTGAAGAAGAAGATGAAGAAGTCGGTAGCCGACGGAGGAGTTTGCCGGACGGCCTGGCTGCGCCTCCTGATGCTCACCTTGACTACCTCACTGGCGATCCGCCTACAGAGCTGATGGGTCATTCTCCTCCTCGTAGCCCTCGCGCCATTCCATCTCCATTGATGTTTACTCCCCAAGTACCGGTTGTTCCACTGCCAAGACCTGATGAGTTGCCCAATTCAAGCGAGTCCTGGATGAATAACAGTTCGTTGTTTGACGACGTGAGCAGTGAACAAGGAATCCCAACGATGATTACCTGGAGTCATGGAGGCAAGGAAGTAGCTGTTGAGGGATCTTGGGACAACTGGAAATCGAAAATACCGTTGCAGAGATCTGGGAAGGACTTCACGATTATGAAGGTTTTGTCTTCTGGTGTTTACCAGTATAGGTTTATTGCTGATGGACAATGGAGATATGCTCCTGACTTGCCTTGGGCCCAAGATGATGCAGGCAATGCTTACAATATCTTGGACTTGCAGGACTATGTCCCAGAAGACATCGAAAGCATTTCAAGCTTTGAACCTCCTCAGTCCCCAGAGTCCAGTTACAGCAGTTTGCAGCTTGGATCTGAAGATTTTTCAAAGGAGCCACCACTGGCTCCTCCCCACTTGAAAACCACACTGCTCGACATGCCTTCCCCATACAATGAAATCTTACCTCCTATATCAAGACCTCAGCATGTTGTGCTGAATCATCTTTACATGCAGAAGGAAAGGGGTGGCCCCTCCGTCGTCGCACTCGGGATGACTCACCGGTTCCTTGCCAAGTACGTAACCGTCGTGCTCTATAAATCCTTGCAGAGACAACGTTAG

Homology

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BLAST of CmoCh03G006170 vs. Swiss-Prot
Match: KINB2_ARATH (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 8.3e-109
Identity = 202/299 (67.56%), Postives = 241/299 (80.60%), Query Frame = 1


Query: 1   MGNVNGREDEDAN-PSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSP 60
           MGNVN RE+ ++N  S VE+ED E+ SR     + ++A  D +        P ELMG SP
Sbjct: 1   MGNVNAREEANSNNASAVEDEDAEICSR-----EAMSAASDGN-----HVAPPELMGQSP 60

Query: 61  PRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNN-SSLFDDVSSEQGIPTMITWSH 120
           P SPRA  SPLMF PQVPV+PL RPDE+   + SWM + SSL+++ S+EQGIPTMITW H
Sbjct: 61  PHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQGIPTMITWCH 120

Query: 121 GGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDD 180
           GGKE+AVEGSWDNWK++  LQRSGKDFTIMKVL SGVY+YRFI DGQWR+AP+LP A+DD
Sbjct: 121 GGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDD 180

Query: 181 AGNAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLL 240
           AGN +NILDLQDYVPEDI+SIS FEPPQSPE+SYS+L LG+ED+SKEPP+ PPHL+ TLL
Sbjct: 181 AGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLL 240

Query: 241 DMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 298
           ++P+   +I  P+ RPQHV+LNHLYMQK + GPSVVALG THRFLAKYVTVVLYKSLQR
Sbjct: 241 NLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289

[Close]

BLAST of CmoCh03G006170 vs. Swiss-Prot
Match: KINB1_ARATH (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana GN=KINB1 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.6e-64
Identity = 139/297 (46.80%), Postives = 187/297 (62.96%), Query Frame = 1


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGN NG++++ A  SG    D    S R +  D     P A   +    P ++ M  SPP
Sbjct: 1   MGNANGKDEDAAAGSG--GADVTSSSARSNGGD-----PSARSRHRR--PSSDSMSSSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
            SP   PSP +F PQVPV PL R +  P ++  W  +  +FD+   EQGIPT+ITW+ GG
Sbjct: 61  GSPARSPSPFLFAPQVPVAPLQRANAPPPNNIQWNQSQRVFDN-PPEQGIPTIITWNQGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
            +VAVEGSWDNW+S+  LQ+SGKD +I+ VL SG+Y Y+ I DG+ +Y PDLP+  D+ G
Sbjct: 121 NDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           N  NILD+ ++VPE+ ESI  FE P SP+ SY      +ED++KEP   PP L  TLL  
Sbjct: 181 NVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLGT 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 298
                E     ++PQHVVLNH+++++     S+VALG+THRF +KY+TVVLYK L R
Sbjct: 241 ----TEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]

BLAST of CmoCh03G006170 vs. Swiss-Prot
Match: AAKB2_RAT (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.7e-27
Identity = 86/253 (33.99%), Postives = 123/253 (48.62%), Query Frame = 1


Query: 56  GHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVS-SEQGIPTMI 115
           GH P +  + +      T    V  LP   +LP   E       L D V  ++Q  PT+I
Sbjct: 25  GHGPGKEHKIMVGS---TDDPSVFSLP-DSKLPGDKEFVPWQQDLDDSVKPTQQARPTVI 84

Query: 116 TWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPW 175
            WS GGKEV + GS++NW +KIPL +S  DF  +  L  G +QY+F  DGQW + P  P 
Sbjct: 85  RWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPV 144

Query: 176 AQDDAGNAYNILDLQ--DYVPEDIESISSFEPPQSPESSYSSLQLG----------SEDF 235
                G   N++ ++  D+   D   + S E  ++     SS   G          SE+ 
Sbjct: 145 VTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEER 204

Query: 236 SKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRF 295
            K PP+ PPHL   +L+  +  +     +  P HV+LNHLY    +   SV+ L  THR+
Sbjct: 205 FKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSTK--DSVMVLSATHRY 264

[Close]

BLAST of CmoCh03G006170 vs. Swiss-Prot
Match: AAKB2_HUMAN (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.7e-27
Identity = 86/253 (33.99%), Postives = 124/253 (49.01%), Query Frame = 1


Query: 56  GHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVS-SEQGIPTMI 115
           GH+P +  + +      T    V  LP   +LP   E       L D V  ++Q  PT+I
Sbjct: 26  GHAPGKEHKIMVGS---TDDPSVFSLP-DSKLPGDKEFVSWQQDLEDSVKPTQQARPTVI 85

Query: 116 TWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPW 175
            WS GGKEV + GS++NW +KIPL +S  DF  +  L  G +QY+F  DGQW + P  P 
Sbjct: 86  RWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPV 145

Query: 176 AQDDAGNAYNILDLQ--DYVPEDIESISSFEPPQSPESSYSSLQLG----------SEDF 235
                G   N++ ++  D+   D   + S E  ++     SS   G          SE+ 
Sbjct: 146 VTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYAFRSEER 205

Query: 236 SKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRF 295
            K PP+ PPHL   +L+  +  +     +  P HV+LNHLY    +   SV+ L  THR+
Sbjct: 206 FKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIK--DSVMVLSATHRY 265

[Close]

BLAST of CmoCh03G006170 vs. Swiss-Prot
Match: AAKB2_MOUSE (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.7e-27
Identity = 86/253 (33.99%), Postives = 123/253 (48.62%), Query Frame = 1


Query: 56  GHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVS-SEQGIPTMI 115
           GH P +  + +      T    V  LP   +LP   E       L D V  ++Q  PT+I
Sbjct: 25  GHGPGKEHKIMVGS---TDDPSVFSLP-DSKLPGDKEFVPWQQDLDDSVKPAQQARPTVI 84

Query: 116 TWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPW 175
            WS GGKEV + GS++NW +KIPL +S  DF  +  L  G +QY+F  DGQW + P  P 
Sbjct: 85  RWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPV 144

Query: 176 AQDDAGNAYNILDLQ--DYVPEDIESISSFEPPQSPESSYSSLQLG----------SEDF 235
                G   N++ ++  D+   D   + S E  ++     SS   G          SE+ 
Sbjct: 145 VTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEER 204

Query: 236 SKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRF 295
            K PP+ PPHL   +L+  +  +     +  P HV+LNHLY    +   SV+ L  THR+
Sbjct: 205 FKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIK--DSVMVLSATHRY 264

[Close]

BLAST of CmoCh03G006170 vs. TrEMBL
Match: A0A0A0KH57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511020 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 5.3e-155
Identity = 270/297 (90.91%), Postives = 281/297 (94.61%), Query Frame = 1


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPSG EEEDEEVG RR SLPDGL+ PPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSGAEEEDEEVGGRRSSLPDGLSVPPDAHLGYHAGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           +SPRAIPSPLMFTPQVPVVPLPRPDE+ +SS+SWM+NSS FD+V SEQGIPTMITWSHGG
Sbjct: 61  QSPRAIPSPLMFTPQVPVVPLPRPDEVHSSSQSWMHNSSWFDEVGSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWK KIPLQRSGKDFTIMKVL SGVYQYRFIADGQWRYAPDLPWAQDDAG
Sbjct: 121 KEVAVEGSWDNWKMKIPLQRSGKDFTIMKVLPSGVYQYRFIADGQWRYAPDLPWAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPPQSPESSY+SLQL ++D+SKEPPLAPPHLKTTLLDM
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYNSLQLVADDYSKEPPLAPPHLKTTLLDM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 298
           P PYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR
Sbjct: 241 PCPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297

[Close]

BLAST of CmoCh03G006170 vs. TrEMBL
Match: A0A067KGY8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08944 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 4.1e-115
Identity = 211/304 (69.41%), Postives = 247/304 (81.25%), Query Frame = 1


Query: 1   MGNVNGREDEDA--NPSG-----VEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTE 60
           MGNVNGR +E+   +PSG     ++      G    +  +G+ +  + HL YL   PP E
Sbjct: 1   MGNVNGRGEEEGLNSPSGSGGGGIDGGGGGGGRGGNNGSEGMVSSDETHLGYLP--PPPE 60

Query: 61  LMGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTM 120
           LMG SPP SPRA  SPLMFTPQVPVVPL RPDE+ + S SWM  +  ++++  EQGIPTM
Sbjct: 61  LMGQSPPHSPRATHSPLMFTPQVPVVPLQRPDEIQSPSNSWMQTTVGYEEMCDEQGIPTM 120

Query: 121 ITWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLP 180
           ITWS+GGK+VAVEGSWDNWK++IPLQRSGKDFTIMKVL SGVYQYRFI D QW+Y PDLP
Sbjct: 121 ITWSYGGKDVAVEGSWDNWKTRIPLQRSGKDFTIMKVLPSGVYQYRFIVDRQWKYIPDLP 180

Query: 181 WAQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHL 240
           WAQDD+GNAYN+LDLQDYVPED+ESISSFEPPQSPESSY++LQLG++D++KEPP  PPHL
Sbjct: 181 WAQDDSGNAYNVLDLQDYVPEDLESISSFEPPQSPESSYNNLQLGNDDYAKEPPFVPPHL 240

Query: 241 KTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYK 298
           + TLL+MPS Y EI PP+SRPQHVVLNHLYMQK +G P+VVALG THRFLAKYVTVVLYK
Sbjct: 241 QMTLLNMPSSYMEIPPPLSRPQHVVLNHLYMQKGKGSPAVVALGSTHRFLAKYVTVVLYK 300

[Close]

BLAST of CmoCh03G006170 vs. TrEMBL
Match: B9SA62_RICCO (Snf1-kinase beta subunit, plants, putative OS=Ricinus communis GN=RCOM_0861290 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 7.1e-115
Identity = 213/309 (68.93%), Postives = 241/309 (77.99%), Query Frame = 1


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSL------------PDGLAAPPDAHLDYLTG 60
           MGNVNGR +ED   + +       GS R                DG+  P  + L YL  
Sbjct: 1   MGNVNGRGEEDGENNIINNNKSPSGSSRGGGIGVVVDEEGGCGTDGVVVPDGSRLAYLP- 60

Query: 61  DPPTELMGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQ 120
            PP ELMG SPP SPRA  SPLMFTPQVPVVPL RPDE+   S SWM  +  ++D+  EQ
Sbjct: 61  -PPPELMGQSPPHSPRATHSPLMFTPQVPVVPLQRPDEIQIPSNSWMQTNVGYEDICDEQ 120

Query: 121 GIPTMITWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRY 180
           GIPTMITWS+GGKEVAVEGSWDNWK +IPLQRSGKD+TIMKVL SGVYQYRFI DGQWRY
Sbjct: 121 GIPTMITWSYGGKEVAVEGSWDNWKMRIPLQRSGKDYTIMKVLPSGVYQYRFIIDGQWRY 180

Query: 181 APDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPL 240
            PDLPWAQDD GNAYNILDLQ+YVPED+ESISSFEPPQSPESSYS+LQLG+++F+KEPP 
Sbjct: 181 IPDLPWAQDDTGNAYNILDLQEYVPEDLESISSFEPPQSPESSYSNLQLGNDEFAKEPPF 240

Query: 241 APPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVT 298
            PPHL+ TLL+MPS Y E+  P+SRPQHVVLNHLY+QK +GGP+VVALG THRFL+KYVT
Sbjct: 241 VPPHLQMTLLNMPSSYMEMPTPLSRPQHVVLNHLYIQKGKGGPAVVALGSTHRFLSKYVT 300

[Close]

BLAST of CmoCh03G006170 vs. TrEMBL
Match: I1L032_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G013900 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-113
Identity = 209/303 (68.98%), Postives = 243/303 (80.20%), Query Frame = 1


Query: 1   MGNVNGREDEDANPSGVE--EEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDP----PTEL 60
           MGN NGR+D +  PSG E  EE+EE         DG     D+  D ++ +P    P+EL
Sbjct: 1   MGNANGRDDVNGTPSGTEGEEEEEEEEEEEEEEDDGEEGGSDSVTDCMSSNPSHHAPSEL 60

Query: 61  MGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMI 120
           MGHSPP SPRA  SP MFTPQVPVVPL +PDE+   S SWM  +S+++D+  E GIPTMI
Sbjct: 61  MGHSPPASPRATQSPFMFTPQVPVVPLQKPDEMHAPSPSWMQTTSVYEDMYCELGIPTMI 120

Query: 121 TWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPW 180
           TWS+ GKEVAVEGSWDNWK+++PLQRSGKDFTIMKVL SGVYQ+RFI DGQWRYAPDLPW
Sbjct: 121 TWSYDGKEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQFRFIVDGQWRYAPDLPW 180

Query: 181 AQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLK 240
           AQDD+GNAYN+LDLQDYVPEDI SISSFEPPQSP+SSY++LQL SED++KEPPL PP+L+
Sbjct: 181 AQDDSGNAYNVLDLQDYVPEDIGSISSFEPPQSPDSSYNNLQLSSEDYAKEPPLVPPYLQ 240

Query: 241 TTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKS 298
            TLL++PS   E+ P  SRPQHVVLNHLYMQK +G PSVVALG T RF+AKYVTVVLYKS
Sbjct: 241 MTLLNVPSTNMEVQPLTSRPQHVVLNHLYMQKGKGSPSVVALGTTQRFVAKYVTVVLYKS 300

[Close]

BLAST of CmoCh03G006170 vs. TrEMBL
Match: A0A058ZW30_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L00156 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-113
Identity = 209/297 (70.37%), Postives = 241/297 (81.14%), Query Frame = 1


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGRED   +PSGV+EE    G    S+ D + AP +A + Y     P ELMG SPP
Sbjct: 1   MGNVNGREDGVGSPSGVDEEGG--GGGDGSVQDSMGAPDEALVGYTA---PAELMGQSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
            SPRA  SPLMF PQVPV PL RPDE+  S  SWM  SS ++D  SEQGIPTMITW +GG
Sbjct: 61  HSPRATQSPLMFAPQVPVAPLHRPDEMHGSGPSWMQTSSGYEDACSEQGIPTMITWCYGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWK+++PLQRSGKDFTIMKVL SGVYQYRFI DGQWR+APD+PW QDD G
Sbjct: 121 KEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQYRFIVDGQWRHAPDIPWTQDDVG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
             YNILDLQD+VPED+ESISSFEPPQSPESSY++L LGSED++KEPP+ PPHL+ TLL++
Sbjct: 181 ATYNILDLQDFVPEDLESISSFEPPQSPESSYTNLFLGSEDYAKEPPMVPPHLQLTLLNV 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 298
           P+ + EI PP+SRPQHVVLNHLYMQK +  P+VVALG T+RFL+KYVTVVLYKSLQR
Sbjct: 241 PALHLEIPPPLSRPQHVVLNHLYMQKGKSCPAVVALGSTNRFLSKYVTVVLYKSLQR 292

[Close]

BLAST of CmoCh03G006170 vs. TAIR10
Match: AT4G16360.3 (AT4G16360.3 5'-AMP-activated protein kinase beta-2 subunit protein)

HSP 1 Score: 382.1 bits (980), Expect = 3.1e-106
Identity = 184/248 (74.19%), Postives = 214/248 (86.29%), Query Frame = 1


Query: 51  PTELMGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNN-SSLFDDVSSEQG 110
           P ELMG SPP SPRA  SPLMF PQVPV+PL RPDE+   + SWM + SSL+++ S+EQG
Sbjct: 14  PPELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQG 73

Query: 111 IPTMITWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYA 170
           IPTMITW HGGKE+AVEGSWDNWK++  LQRSGKDFTIMKVL SGVY+YRFI DGQWR+A
Sbjct: 74  IPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHA 133

Query: 171 PDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLA 230
           P+LP A+DDAGN +NILDLQDYVPEDI+SIS FEPPQSPE+SYS+L LG+ED+SKEPP+ 
Sbjct: 134 PELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVV 193

Query: 231 PPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTV 290
           PPHL+ TLL++P+   +I  P+ RPQHV+LNHLYMQK + GPSVVALG THRFLAKYVTV
Sbjct: 194 PPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTV 253

Query: 291 VLYKSLQR 298
           VLYKSLQR
Sbjct: 254 VLYKSLQR 261

[Close]

BLAST of CmoCh03G006170 vs. TAIR10
Match: AT5G21170.2 (AT5G21170.2 5'-AMP-activated protein kinase beta-2 subunit protein)

HSP 1 Score: 219.5 bits (558), Expect = 2.7e-57
Identity = 136/326 (41.72%), Postives = 188/326 (57.67%), Query Frame = 1


Query: 1   MGNVNGREDEDANPSGVEEE----------DEEVGSR-RRSLPDGLAAPPDAH-----LD 60
           MGN NG++++ A  SG  +           D    SR RR   D +++ P          
Sbjct: 1   MGNANGKDEDAAAGSGGADVTSSSARSNGGDPSARSRHRRPSSDSMSSSPPGSPARSPSP 60

Query: 61  YLTGDPPTELMGH-------SPPR------SPRAIPSPLMFTPQVPVVPLPRPDELPNSS 120
           +L    PT L+ H       SP R          +P+  +    VPV PL R +  P ++
Sbjct: 61  FLFAPQPT-LLFHVTSYNICSPMRHLFHCLGLTCVPNGCISCRMVPVAPLQRANAPPPNN 120

Query: 121 ESWMNNSSLFDDVSSEQGIPTMITWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVL 180
             W  +  +FD+   EQGIPT+ITW+ GG +VAVEGSWDNW+S+  LQ+SGKD +I+ VL
Sbjct: 121 IQWNQSQRVFDN-PPEQGIPTIITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVL 180

Query: 181 SSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPESS 240
            SG+Y Y+ I DG+ +Y PDLP+  D+ GN  NILD+ ++VPE+ ESI  FE P SP+ S
Sbjct: 181 PSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHS 240

Query: 241 YSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGP 298
           Y      +ED++KEP   PP L  TLL       E     ++PQHVVLNH+++++     
Sbjct: 241 YGQTLPAAEDYAKEPLAVPPQLHLTLLGT----TEETAIATKPQHVVLNHVFIEQGWTPQ 300

[Close]

BLAST of CmoCh03G006170 vs. TAIR10
Match: AT2G28060.1 (AT2G28060.1 5'-AMP-activated protein kinase beta-2 subunit protein)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-16
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 1


Query: 193 PEDIE--SISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPP 252
           P+D E  ++  FE P SP SSY+++   +ED +++PP  PPHL+ +LL         +  
Sbjct: 6   PDDHEDTTVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGS----MEL 65

Query: 253 ISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQ 299
              PQ+VVLNHLY++      SVVALG +HRF  K+VTVV+YK +QR+
Sbjct: 66  AYAPQNVVLNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQRR 109

[Close]

BLAST of CmoCh03G006170 vs. NCBI nr
Match: gi|449434042|ref|XP_004134805.1| (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativus])

HSP 1 Score: 555.1 bits (1429), Expect = 7.7e-155
Identity = 270/297 (90.91%), Postives = 281/297 (94.61%), Query Frame = 1


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPSG EEEDEEVG RR SLPDGL+ PPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSGAEEEDEEVGGRRSSLPDGLSVPPDAHLGYHAGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           +SPRAIPSPLMFTPQVPVVPLPRPDE+ +SS+SWM+NSS FD+V SEQGIPTMITWSHGG
Sbjct: 61  QSPRAIPSPLMFTPQVPVVPLPRPDEVHSSSQSWMHNSSWFDEVGSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWK KIPLQRSGKDFTIMKVL SGVYQYRFIADGQWRYAPDLPWAQDDAG
Sbjct: 121 KEVAVEGSWDNWKMKIPLQRSGKDFTIMKVLPSGVYQYRFIADGQWRYAPDLPWAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPPQSPESSY+SLQL ++D+SKEPPLAPPHLKTTLLDM
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYNSLQLVADDYSKEPPLAPPHLKTTLLDM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 298
           P PYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR
Sbjct: 241 PCPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297

[Close]

BLAST of CmoCh03G006170 vs. NCBI nr
Match: gi|659080784|ref|XP_008440979.1| (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo])

HSP 1 Score: 550.1 bits (1416), Expect = 2.5e-153
Identity = 266/297 (89.56%), Postives = 280/297 (94.28%), Query Frame = 1


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPSG EEEDEEVG RR SLPDGLAAPPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSGAEEEDEEVGGRRSSLPDGLAAPPDAHLGYHAGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           +SPRAIPSPLMFTPQVPV+PLPRPDE+ +SS+SWM+NSS FD+V S+QGIPTMITWSHGG
Sbjct: 61  QSPRAIPSPLMFTPQVPVIPLPRPDEVHSSSQSWMHNSSWFDEVGSDQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWK KIPLQRSGKDF IMKVL SGVYQYRFIADGQWRYAPDLPWAQDDAG
Sbjct: 121 KEVAVEGSWDNWKMKIPLQRSGKDFAIMKVLPSGVYQYRFIADGQWRYAPDLPWAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPPQSPESSY+SLQL ++D+SKEPPLAPPHLKTTLLDM
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYNSLQLVADDYSKEPPLAPPHLKTTLLDM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 298
           P PYNEILPP+SRPQHVVLNHLYMQKERGGPSVVALGM+HRFL KYVTVVLYKSLQR
Sbjct: 241 PCPYNEILPPLSRPQHVVLNHLYMQKERGGPSVVALGMSHRFLRKYVTVVLYKSLQR 297

[Close]

BLAST of CmoCh03G006170 vs. NCBI nr
Match: gi|802614697|ref|XP_012074789.1| (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Jatropha curcas])

HSP 1 Score: 422.5 bits (1085), Expect = 5.9e-115
Identity = 211/304 (69.41%), Postives = 247/304 (81.25%), Query Frame = 1


Query: 1   MGNVNGREDEDA--NPSG-----VEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTE 60
           MGNVNGR +E+   +PSG     ++      G    +  +G+ +  + HL YL   PP E
Sbjct: 1   MGNVNGRGEEEGLNSPSGSGGGGIDGGGGGGGRGGNNGSEGMVSSDETHLGYLP--PPPE 60

Query: 61  LMGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTM 120
           LMG SPP SPRA  SPLMFTPQVPVVPL RPDE+ + S SWM  +  ++++  EQGIPTM
Sbjct: 61  LMGQSPPHSPRATHSPLMFTPQVPVVPLQRPDEIQSPSNSWMQTTVGYEEMCDEQGIPTM 120

Query: 121 ITWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLP 180
           ITWS+GGK+VAVEGSWDNWK++IPLQRSGKDFTIMKVL SGVYQYRFI D QW+Y PDLP
Sbjct: 121 ITWSYGGKDVAVEGSWDNWKTRIPLQRSGKDFTIMKVLPSGVYQYRFIVDRQWKYIPDLP 180

Query: 181 WAQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHL 240
           WAQDD+GNAYN+LDLQDYVPED+ESISSFEPPQSPESSY++LQLG++D++KEPP  PPHL
Sbjct: 181 WAQDDSGNAYNVLDLQDYVPEDLESISSFEPPQSPESSYNNLQLGNDDYAKEPPFVPPHL 240

Query: 241 KTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYK 298
           + TLL+MPS Y EI PP+SRPQHVVLNHLYMQK +G P+VVALG THRFLAKYVTVVLYK
Sbjct: 241 QMTLLNMPSSYMEIPPPLSRPQHVVLNHLYMQKGKGSPAVVALGSTHRFLAKYVTVVLYK 300

[Close]

BLAST of CmoCh03G006170 vs. NCBI nr
Match: gi|255563760|ref|XP_002522881.1| (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Ricinus communis])

HSP 1 Score: 421.8 bits (1083), Expect = 1.0e-114
Identity = 213/309 (68.93%), Postives = 241/309 (77.99%), Query Frame = 1


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSL------------PDGLAAPPDAHLDYLTG 60
           MGNVNGR +ED   + +       GS R                DG+  P  + L YL  
Sbjct: 1   MGNVNGRGEEDGENNIINNNKSPSGSSRGGGIGVVVDEEGGCGTDGVVVPDGSRLAYLP- 60

Query: 61  DPPTELMGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQ 120
            PP ELMG SPP SPRA  SPLMFTPQVPVVPL RPDE+   S SWM  +  ++D+  EQ
Sbjct: 61  -PPPELMGQSPPHSPRATHSPLMFTPQVPVVPLQRPDEIQIPSNSWMQTNVGYEDICDEQ 120

Query: 121 GIPTMITWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRY 180
           GIPTMITWS+GGKEVAVEGSWDNWK +IPLQRSGKD+TIMKVL SGVYQYRFI DGQWRY
Sbjct: 121 GIPTMITWSYGGKEVAVEGSWDNWKMRIPLQRSGKDYTIMKVLPSGVYQYRFIIDGQWRY 180

Query: 181 APDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPL 240
            PDLPWAQDD GNAYNILDLQ+YVPED+ESISSFEPPQSPESSYS+LQLG+++F+KEPP 
Sbjct: 181 IPDLPWAQDDTGNAYNILDLQEYVPEDLESISSFEPPQSPESSYSNLQLGNDEFAKEPPF 240

Query: 241 APPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVT 298
            PPHL+ TLL+MPS Y E+  P+SRPQHVVLNHLY+QK +GGP+VVALG THRFL+KYVT
Sbjct: 241 VPPHLQMTLLNMPSSYMEMPTPLSRPQHVVLNHLYIQKGKGGPAVVALGSTHRFLSKYVT 300

[Close]

BLAST of CmoCh03G006170 vs. NCBI nr
Match: gi|1009107470|ref|XP_015879914.1| (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Ziziphus jujuba])

HSP 1 Score: 420.2 bits (1079), Expect = 2.9e-114
Identity = 214/297 (72.05%), Postives = 240/297 (80.81%), Query Frame = 1


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGRED + N SGV+EE   V  +   +     A  ++          +ELMG SPP
Sbjct: 1   MGNVNGREDGNGNQSGVDEEGGGVSVQEEGMISHGPARGES----------SELMGQSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
            SPRA  SPLMFTPQ+PVVPL RPDEL   S SWM  +S ++D+  EQGIPTM+TWSHGG
Sbjct: 61  HSPRATHSPLMFTPQLPVVPLQRPDELHIPSPSWMQTTSGYEDMYCEQGIPTMLTWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWK+++PLQRSGKDFTIMKVL SGVYQYRFI DGQWRYAPDLP AQDDAG
Sbjct: 121 KEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQYRFIVDGQWRYAPDLPMAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           N YNILDL+DYVPEDI SISSFEPPQSP+SSY S+QLGSEDF+KEPPL PPHL+ TLL +
Sbjct: 181 NPYNILDLKDYVPEDIGSISSFEPPQSPDSSYDSMQLGSEDFAKEPPLVPPHLQMTLLSV 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 298
           P+PY EI  P+SRPQHVVLNHLYMQK + GPSVVALG THRFLAKYV+VVLYKSLQR
Sbjct: 241 PAPYMEIPLPLSRPQHVVLNHLYMQKWKSGPSVVALGSTHRFLAKYVSVVLYKSLQR 287

The following BLAST results are available for this feature:

BLAST of CmoCh03G006170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KINB2_ARATH	8.3e-109	67.56	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana GN...	[more]
KINB1_ARATH	1.6e-64	46.80	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana GN...	[more]
AAKB2_RAT	2.7e-27	33.99	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus GN=Prkab2 PE...	[more]
AAKB2_HUMAN	2.7e-27	33.99	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens GN=PRKAB2 PE=1 SV...	[more]
AAKB2_MOUSE	4.7e-27	33.99	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus GN=Prkab2 PE=1 SV...	[more]

BLAST of CmoCh03G006170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH57_CUCSA	5.3e-155	90.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511020 PE=4 SV=1	[more]
A0A067KGY8_JATCU	4.1e-115	69.41	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08944 PE=4 SV=1	[more]
B9SA62_RICCO	7.1e-115	68.93	Snf1-kinase beta subunit, plants, putative OS=Ricinus communis GN=RCOM_0861290 P...	[more]
I1L032_SOYBN	1.3e-113	68.98	Uncharacterized protein OS=Glycine max GN=GLYMA_09G013900 PE=4 SV=1	[more]
A0A058ZW30_EUCGR	1.3e-113	70.37	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L00156 PE=4 SV=1	[more]

BLAST of CmoCh03G006170 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16360.3	3.1e-106	74.19	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	2.7e-57	41.72	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT2G28060.1	2.3e-16	44.44	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

BLAST of CmoCh03G006170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434042\|ref\|XP_004134805.1\|	7.7e-155	90.91	PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativu...	[more]
gi\|659080784\|ref\|XP_008440979.1\|	2.5e-153	89.56	PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis m...	[more]
gi\|802614697\|ref\|XP_012074789.1\|	5.9e-115	69.41	PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Jatropha curca...	[more]
gi\|255563760\|ref\|XP_002522881.1\|	1.0e-114	68.93	PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Ricinus commun...	[more]
gi\|1009107470\|ref\|XP_015879914.1\|	2.9e-114	72.05	PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Ziziphus jujub...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006828	ASC_dom
IPR014756	Ig_E-set

Vocabulary: **Biological Process**
Term	Definition
GO:0009744	response to sucrose
GO:0043562	cellular response to nitrogen levels

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043562	cellular response to nitrogen levels
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009744	response to sucrose
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G006170.1	CmoCh03G006170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 223..293 score: 2.2
IPR006828	Association with the SNF1 complex (ASC) domain	SMART	SM01010	AMPKBI_2	coord: 205..295 score: 1.2
IPR014756	Immunoglobulin E-set	unknown	SSF81296	E set domains	coord: 109..195 score: 8.4
None	No IPR available	PANTHER	PTHR10343	5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT	coord: 50..296 score: 3.0E
None	No IPR available	unknown	SSF160219	AMPKBI-like	coord: 192..294 score: 7.19

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G006170	Cucsa.044600	Cucumber (Gy14) v1	cgycmoB0042
CmoCh03G006170	CmaCh03G005900	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G006170	CmaCh07G003600	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G006170	Cla014387	Watermelon (97103) v1	cmowmB623
CmoCh03G006170	Csa6G511020	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G006170	MELO3C008009	Melon (DHL92) v3.5.1	cmomeB605
CmoCh03G006170	ClCG01G021250	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G006170	CSPI06G32810	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G006170	Lsi01G004990	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G006170	Cp4.1LG10g10230	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G006170	Cp4.1LG19g08350	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G006170	MELO3C008009.2	Melon (DHL92) v3.6.1	cmomedB694
CmoCh03G006170	CsaV3_6G048260	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G006170	Cla97C01G020820	Watermelon (97103) v2	cmowmbB642
CmoCh03G006170	CsGy6G032430	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G006170	CsGy1G015320	Cucumber (Gy14) v2	cgybcmoB118
CmoCh03G006170	Carg00511	Silver-seed gourd	carcmoB0551
CmoCh03G006170	Carg07887	Silver-seed gourd	carcmoB0886

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G006170	CmoCh07G003530	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G006170	Wax gourd	cmowgoB0781
CmoCh03G006170	Cucurbita maxima (Rimu)	cmacmoB419
CmoCh03G006170	Cucurbita pepo (Zucchini)	cmocpeB630
CmoCh03G006170	Bottle gourd (USVL1VR-Ls)	cmolsiB594
CmoCh03G006170	Watermelon (97103) v2	cmowmbB641