CmoCh03G005860 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G005860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Plastid-lipid-associated, chloroplastic
Location	Cmo_Chr03 : 5655075 .. 5656859 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGCAGATTTTGAAGACGCAGCTGGTGTGTGAGTTCTCGTCTTTCGGTTTGCACTGCGTGTTTGTTTGTCTGATTCAGGGAACAATGGCGTTTGTTTCTCAATTCAGTCAACTTCCATGCAGGACTCTCTCACTGAATCCACCGCAGACTCAACTCATTTCTAAACCCTTGATTTTCCCCATCGGTCCGATTGTGGCTGGCGCCAGAGCCGCGGCGGGGAAGTTAGCGATCTCAGCCAGACCTGTGTTTAAAGTCCGTGCGGTGGAGAACGATGACGAGCGGGGCGAGGAGAAGAAGAGGCCGTACGCAGATGGTCCGGCTGTGGCGGTCGCCGAAGAGGAGGAAAAGCCTCTGGAGCAATCGGAGATTTATAAACTGAAGAAGGCGTTGGTTGATTCGTTTTACGGGACCGATCGTGGATTACGAGTGAATAGCGAAACTAGGGCAGAGATACTTGAGCTGATTGCGCAGCTGGAAGCGAAAAATCCAACACCAGCTCCTACTGAGGCTCTGTCTCTGCTCAACGGCAAATGGATTCTCGCGTAAGTTCTCGCAATAATTTATGAACAGATTTCTCTCTATACTATATGATTGAACTTCGTTATTAGGAATCGAGTAATTTTTTAGGGATGACTGAAAAACTGGAACGAGTCTAATCTAATTTCTTATGTGCAAACCTTCATAATTTCTTAAATGTTGGTGGTAAGTTCTTGTACTTGTTGATTTTCAAGTTCATATTTGGACTCGTATTGTTCTGAGTAGAAATTGATCACCCTGAGTTTGTTGATATGAATGTTTGGGGCTGTAGGTACACATCGTTCTCGGGTCTGTTTCCCCTGTTGTCTAGGAGTACATTTTCATTGGTCAAAGTGGAAGAAATTTCACAGACAATTGACTCCGAGGGCTTCACTGTCCAAAACTCCGTCCTGTTTTCCGGCCCTCTGGCCACCACTTCCATTAGTACTAATGCCAAGTTTGAAGTTAGAAGCCCTCAGCGCGTACAGGTAAGCCAGAATCTGTCTTTCACATGGATTTTCTTGTCCGTATGCGCATTCTCAACTGTTTGACTTTCCAGATCATGTTTGAAGAAGGTGTCATTGGGACTCCGCAGCTGACGGATTCAATAGTGATACCAGAAAATGTGGAGTTTCTTGGGCAGAAGATTGAGCTTTCAGCATTCAGCGGCATCATATCCTCCATTCAAGACACTGCTTCAAATGTGGTCAAGACAATTTCGAGCCAACCCCCAATCAAGTTCCCAATCTCGAACGCCAAGGCAGAGTCGTGGTTGTTAACTACTTATCTTGATGAAGATGTTCGAATTTCACGAGGTGATGGCGGTAGCGTGTTTGTACTCATCAAGGAAGGCAGTGCTCTCTTATCCCCCTAAAACCCTTAATCTTCTCACTATATTCTGCTGTTCCAAGGTGGAAATTGAGGAGTTCTATGAAGGGTTCATAGGAAACTGAATTATTATTTAAAGTTGCTGTCAAATTCGTAAATGGTATTGCCTTTTGTTAAGGGCCAGCTTCAATTCGCTATGTCTTCTGTTAAATTGGTAATGGTCACTTGAGTAACAGAAGTTATTCAATGGTATGAAAAGCTTGTTTGGATTAGTATTTTATATCCTATTAATTACTGTCTTTTGGGATGGATTTCCAAATTTGCTGCATCAGAAAGACAGAAACCTCCAATAGGCCTTGAGTGTTCTTAAAATATTTTACAAAGAAACTCATTTGATCATTATTGCATCCAAGAGGTAAGTACTTGAAATTTATGTTCTA

mRNA sequence

AAGGCAGATTTTGAAGACGCAGCTGGTGTGTGAGTTCTCGTCTTTCGGTTTGCACTGCGTGTTTGTTTGTCTGATTCAGGGAACAATGGCGTTTGTTTCTCAATTCAGTCAACTTCCATGCAGGACTCTCTCACTGAATCCACCGCAGACTCAACTCATTTCTAAACCCTTGATTTTCCCCATCGGTCCGATTGTGGCTGGCGCCAGAGCCGCGGCGGGGAAGTTAGCGATCTCAGCCAGACCTGTGTTTAAAGTCCGTGCGGTGGAGAACGATGACGAGCGGGGCGAGGAGAAGAAGAGGCCGTACGCAGATGGTCCGGCTGTGGCGGTCGCCGAAGAGGAGGAAAAGCCTCTGGAGCAATCGGAGATTTATAAACTGAAGAAGGCGTTGGTTGATTCGTTTTACGGGACCGATCGTGGATTACGAGTGAATAGCGAAACTAGGGCAGAGATACTTGAGCTGATTGCGCAGCTGGAAGCGAAAAATCCAACACCAGCTCCTACTGAGGCTCTGTCTCTGCTCAACGGCAAATGGATTCTCGCGTACACATCGTTCTCGGGTCTGTTTCCCCTGTTGTCTAGGAGTACATTTTCATTGGTCAAAGTGGAAGAAATTTCACAGACAATTGACTCCGAGGGCTTCACTGTCCAAAACTCCGTCCTGTTTTCCGGCCCTCTGGCCACCACTTCCATTAGTACTAATGCCAAGTTTGAAGTTAGAAGCCCTCAGCGCGTACAGATCATGTTTGAAGAAGGTGTCATTGGGACTCCGCAGCTGACGGATTCAATAGTGATACCAGAAAATGTGGAGTTTCTTGGGCAGAAGATTGAGCTTTCAGCATTCAGCGGCATCATATCCTCCATTCAAGACACTGCTTCAAATGTGGTCAAGACAATTTCGAGCCAACCCCCAATCAAGTTCCCAATCTCGAACGCCAAGGCAGAGTCGTGGTTGTTAACTACTTATCTTGATGAAGATGTTCGAATTTCACGAGGTGATGGCGGTAGCGTGTTTGTACTCATCAAGGAAGGCAGTGCTCTCTTATCCCCCTAAAACCCTTAATCTTCTCACTATATTCTGCTGTTCCAAGGTGGAAATTGAGGAGTTCTATGAAGGGTTCATAGGAAACTGAATTATTATTTAAAGTTGCTGTCAAATTCGTAAATGGTATTGCCTTTTGTTAAGGGCCAGCTTCAATTCGCTATGTCTTCTGTTAAATTGGTAATGGTCACTTGAGTAACAGAAGTTATTCAATGGTATGAAAAGCTTGTTTGGATTAGTATTTTATATCCTATTAATTACTGTCTTTTGGGATGGATTTCCAAATTTGCTGCATCAGAAAGACAGAAACCTCCAATAGGCCTTGAGTGTTCTTAAAATATTTTACAAAGAAACTCATTTGATCATTATTGCATCCAAGAGGTAAGTACTTGAAATTTATGTTCTA

Coding sequence (CDS)

ATGGCGTTTGTTTCTCAATTCAGTCAACTTCCATGCAGGACTCTCTCACTGAATCCACCGCAGACTCAACTCATTTCTAAACCCTTGATTTTCCCCATCGGTCCGATTGTGGCTGGCGCCAGAGCCGCGGCGGGGAAGTTAGCGATCTCAGCCAGACCTGTGTTTAAAGTCCGTGCGGTGGAGAACGATGACGAGCGGGGCGAGGAGAAGAAGAGGCCGTACGCAGATGGTCCGGCTGTGGCGGTCGCCGAAGAGGAGGAAAAGCCTCTGGAGCAATCGGAGATTTATAAACTGAAGAAGGCGTTGGTTGATTCGTTTTACGGGACCGATCGTGGATTACGAGTGAATAGCGAAACTAGGGCAGAGATACTTGAGCTGATTGCGCAGCTGGAAGCGAAAAATCCAACACCAGCTCCTACTGAGGCTCTGTCTCTGCTCAACGGCAAATGGATTCTCGCGTACACATCGTTCTCGGGTCTGTTTCCCCTGTTGTCTAGGAGTACATTTTCATTGGTCAAAGTGGAAGAAATTTCACAGACAATTGACTCCGAGGGCTTCACTGTCCAAAACTCCGTCCTGTTTTCCGGCCCTCTGGCCACCACTTCCATTAGTACTAATGCCAAGTTTGAAGTTAGAAGCCCTCAGCGCGTACAGATCATGTTTGAAGAAGGTGTCATTGGGACTCCGCAGCTGACGGATTCAATAGTGATACCAGAAAATGTGGAGTTTCTTGGGCAGAAGATTGAGCTTTCAGCATTCAGCGGCATCATATCCTCCATTCAAGACACTGCTTCAAATGTGGTCAAGACAATTTCGAGCCAACCCCCAATCAAGTTCCCAATCTCGAACGCCAAGGCAGAGTCGTGGTTGTTAACTACTTATCTTGATGAAGATGTTCGAATTTCACGAGGTGATGGCGGTAGCGTGTTTGTACTCATCAAGGAAGGCAGTGCTCTCTTATCCCCCTAA

Homology

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BLAST of CmoCh03G005860 vs. Swiss-Prot
Match: CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis sativus GN=CHRC PE=1 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 1.0e-136
Identity = 258/322 (80.12%), Postives = 283/322 (87.89%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAISARPVFKVRAV 60
           MAFVSQF+QLPC+TL+LNPPQ QL SKP +FPI  I A ARAAAGK  IS RP FKVRAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISVRPAFKVRAV 60

Query: 61  ENDDERGEEKKRPYADGPAVAVAE-EEEKPLEQSEIYKLKKALVDSFYGTDRGLRVNSET 120
            NDDE GE+K   Y D  +VAVAE EEEKPLE SEIYKLKKALVDSFYGTDRGLRV+ +T
Sbjct: 61  LNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKVEEISQ 180
           RAEI+ELI QLE+KNPTPAPTEAL+LLNGKWILAYT+F+GLFPLLSR+   LVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVKVEEISQ 180

Query: 181 TIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDSIVIPE 240
           TIDSE  TVQNSV FSGPLATTSI+TNAKFEVRSP RV I FEEGVIGTPQLTDSIVIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTYLDEDV 300
           NV+FLGQKI+ + F+GIISS+QDTASNV KTISSQPPIKF ISN + ESWLLTTYLDED+
Sbjct: 241 NVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLS 322
           RISRGDGGSVFVL+KEGS+ LS
Sbjct: 301 RISRGDGGSVFVLLKEGSSFLS 321

[Close]

BLAST of CmoCh03G005860 vs. Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.2e-116
Identity = 231/328 (70.43%), Postives = 262/328 (79.88%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAIS------ARPV 60
           MA +SQ +Q PC+TLS NPP  Q  SKP I P+  +   +R+ A K  +S      ARP+
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRI-SRSLAKKSFLSIQGFTRARPL 60

Query: 61  FKVRAVENDDERGEEKKRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGLR 120
              RA + DDE G EK++    G A+AVAEEE  P E +EI  LKKALVDSFYGTDRGL 
Sbjct: 61  VLTRAAD-DDEWGPEKEKE--GGGALAVAEEES-PKEVTEIDNLKKALVDSFYGTDRGLN 120

Query: 121 VNSETRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKV 180
             SETRAEI+ELI QLEAKNPTPAPTEAL+LLN KWIL YTSFSGLFPLLSR T  L +V
Sbjct: 121 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 180

Query: 181 EEISQTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDS 240
           EEISQTIDSE FTVQNS+ F+GPLATTSISTNAKFEVRSP+RVQI FEEGVIGTPQ+TDS
Sbjct: 181 EEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDS 240

Query: 241 IVIPENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTY 300
           +V+PENVEFLGQKI+LS F GI+SS+QDTAS+V KTISSQPP+KF ISN+ A+SWLLTTY
Sbjct: 241 LVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTY 300

Query: 301 LDEDVRISRGDGGSVFVLIKEGSALLSP 323
           LDED+RISR D GSVFV IKEGS LL P
Sbjct: 301 LDEDLRISRADAGSVFVFIKEGSPLLMP 323

[Close]

BLAST of CmoCh03G005860 vs. Swiss-Prot
Match: LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 391.0 bits (1003), Expect = 1.3e-107
Identity = 215/329 (65.35%), Postives = 252/329 (76.60%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGA-----RAAAGKLAISARPVF 60
           MA +S  +Q+PC+TL +    ++  SK    PI      +     R+ + K   + +P F
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKF 60

Query: 61  KVRAVEND--DERGEEKKRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGL 120
             +A   D  DE G E ++    G AV    EEE P E SEI  LKK L DS YGT+RGL
Sbjct: 61  TAQATNYDKEDEWGPEVEQIRPGGVAVV---EEEPPKEPSEIELLKKQLADSLYGTNRGL 120

Query: 121 RVNSETRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVK 180
             +SETRAEI+ELI QLE+KNP PAPTEAL+LLNGKWILAYTSFSGLFPLLSR    LV+
Sbjct: 121 SASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVR 180

Query: 181 VEEISQTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTD 240
           VEEISQTIDSE FTVQNSV+F+GPLATTSISTNAKFEVRSP+RVQI FEEG+IGTPQLTD
Sbjct: 181 VEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTD 240

Query: 241 SIVIPENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTT 300
           SIV+PENVEFLGQKI+LS F G+I+S+QDTAS+V K+ISSQPPIKFPI+N  A+SWLLTT
Sbjct: 241 SIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTT 300

Query: 301 YLDEDVRISRGDGGSVFVLIKEGSALLSP 323
           YLD+++RISRGD GSVFVLIKEGS LL P
Sbjct: 301 YLDDELRISRGDAGSVFVLIKEGSPLLKP 326

[Close]

BLAST of CmoCh03G005860 vs. Swiss-Prot
Match: LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 2.9e-107
Identity = 214/329 (65.05%), Postives = 251/329 (76.29%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPI-----VAGARAAAGKLAISARPVF 60
           MA +S  +Q+PC+TL +    ++  SK    PI            R+ + K   + +P F
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKF 60

Query: 61  KVRAVEND--DERGEEKKRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGL 120
             +A   D  DE G E ++    G AV    EEE P E SEI  LKK L DS YGT+RGL
Sbjct: 61  TAQATNYDKEDEWGPEVEQIRPGGVAVV---EEEPPKEPSEIELLKKQLADSLYGTNRGL 120

Query: 121 RVNSETRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVK 180
             +SETRAEI+ELI QLE+KNP PAPTEAL+LLNGKWILAYTSFSGLFPLLSR    LV+
Sbjct: 121 SASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVR 180

Query: 181 VEEISQTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTD 240
           VEEISQTIDSE FTVQNSV+F+GPLATTSISTNAKFEVRSP+RVQI FEEG+IGTPQLTD
Sbjct: 181 VEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTD 240

Query: 241 SIVIPENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTT 300
           SIV+PENVEFLGQKI++S F G+I+S+QDTAS+VVK+ISSQPPIKFPI+N  A+SWLLTT
Sbjct: 241 SIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTT 300

Query: 301 YLDEDVRISRGDGGSVFVLIKEGSALLSP 323
           YLD+++RI RGD GSVFVLIKEGS LL P
Sbjct: 301 YLDDELRIPRGDAGSVFVLIKEGSPLLKP 326

[Close]

BLAST of CmoCh03G005860 vs. Swiss-Prot
Match: PAP2_BRACM (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.6e-102
Identity = 202/324 (62.35%), Postives = 251/324 (77.47%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKP--LIFPIGPIVAGARAAAGKLAISARPVFKVR 60
           MA V  F+Q PC+T   +   ++ +SKP   + P+  +        G+ A+S R  F+VR
Sbjct: 1   MATVQFFNQFPCKTRVQSSANSKPLSKPPSSLVPMSALTRRPSFPPGEFAVS-RSDFRVR 60

Query: 61  AVENDDERGEEKKRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGLRVNSE 120
            ++ +DE   E       G A+ +AEE  + +E++E+  LK++LVDS YGTDRGL  +SE
Sbjct: 61  VIDAEDELDPETSE--GGGSALLMAEEAIESVEETEV--LKRSLVDSLYGTDRGLSASSE 120

Query: 121 TRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKVEEIS 180
           TRAEI +LI QLE+KNPTPAPT+AL LLNGKWILAYTSF GLFPLLSR    LVKV+EIS
Sbjct: 121 TRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIVPLVKVDEIS 180

Query: 181 QTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDSIVIP 240
           QTIDS+ FTV+NSVLF+GPLATTSISTNAKFE+RSP+RVQI FEEGVIGTPQLTDSI IP
Sbjct: 181 QTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTDSIEIP 240

Query: 241 ENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTYLDED 300
           E VEFLGQKI+L+   G+++S+QDTA++V +TISSQPP+KF +    A+SWLLTTYLD+D
Sbjct: 241 EYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKD 300

Query: 301 VRISRGDGGSVFVLIKEGSALLSP 323
           +RISRGDGGSVFVLIKEGS LL+P
Sbjct: 301 IRISRGDGGSVFVLIKEGSPLLNP 319

[Close]

BLAST of CmoCh03G005860 vs. TrEMBL
Match: A0A0A0KL49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512870 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 1.1e-134
Identity = 258/322 (80.12%), Postives = 283/322 (87.89%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAISARPVFKVRAV 60
           MAFVSQF+QLPC+TL+LNPPQ QL SKP +FPI  I A ARAAAGK  IS RP FKVRAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISVRPAFKVRAV 60

Query: 61  ENDDERGEEKKRPYADGPAVAVAE-EEEKPLEQSEIYKLKKALVDSFYGTDRGLRVNSET 120
            NDDE GE+K   Y D  +VAVAE EEEKPLE SEIYKLKKALVDSFYGTDRGLRV+ +T
Sbjct: 61  LNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKVEEISQ 180
           RAEI+ELI QLE+KNPTPAPTEAL+LLNGKWILAYT+F+GLFPLLSR+   LVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVKVEEISQ 180

Query: 181 TIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDSIVIPE 240
           TIDSE  TVQNSV FSGPLATTSI+TNAKFEVRSP RV I FEEGVIGTPQLTDSIVIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTYLDEDV 300
           NV+FLGQKI+ + F+GIISS+QDTASNV KTISSQPPIKF ISN + ESWLLTTYLDED+
Sbjct: 241 NVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLS 322
           RISRGDGGSVFVL+KEGS+ LS
Sbjct: 301 RISRGDGGSVFVLLKEGSSFLS 321

[Close]

BLAST of CmoCh03G005860 vs. TrEMBL
Match: A0A067GF90_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020639mg PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 4.5e-115
Identity = 231/328 (70.43%), Postives = 263/328 (80.18%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAIS------ARPV 60
           MA +SQ +Q PC+TLS NPP  Q  SKP I P+  +   +R+ A K  +S      ARP+
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRI-SRSLAKKSFLSIQGFTRARPL 60

Query: 61  FKVRAVENDDERGEEKKRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGLR 120
              RA + DDE G EK++   +G A+AVAEEE  P E +EI  LKKALVDSFYGTDRGL 
Sbjct: 61  VLTRAAD-DDEWGPEKEKE--EGGALAVAEEES-PKEVTEIDNLKKALVDSFYGTDRGLN 120

Query: 121 VNSETRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKV 180
             SETRAEI+ELI QLEAKNPTPAPTEAL+LLN KWIL YTSFSGLFPLLSR T  L +V
Sbjct: 121 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 180

Query: 181 EEISQTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDS 240
           EEISQTIDSE FTVQNS+ F+GPLATTSISTNAKFEVRSP+RVQI FEEG+IGTPQ+TDS
Sbjct: 181 EEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDS 240

Query: 241 IVIPENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTY 300
           +VIPENVEFLGQKI+LS F GI+SS+QDTAS+V KTISSQPP+KF ISN+ A+SWLLTTY
Sbjct: 241 LVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTY 300

Query: 301 LDEDVRISRGDGGSVFVLIKEGSALLSP 323
           LDED+RISR D GSVFV IKEGS LL P
Sbjct: 301 LDEDLRISRADAGSVFVFIKEGSPLLMP 323

[Close]

BLAST of CmoCh03G005860 vs. TrEMBL
Match: V4TR92_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015934mg PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.3e-114
Identity = 231/328 (70.43%), Postives = 262/328 (79.88%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAIS------ARPV 60
           MA +SQ +Q PC+TLS NPP  Q  SKP I P+  +   +R+ A K  +S      ARP+
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRI-SRSLAKKSFLSIQGFTRARPL 60

Query: 61  FKVRAVENDDERGEEKKRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGLR 120
              RA + DDE G EK++    G A+AVAEEE  P E +EI  LKKALVDSFYGTDRGL 
Sbjct: 61  VLTRAAD-DDEWGPEKEKE--GGGALAVAEEES-PKEVTEIDNLKKALVDSFYGTDRGLN 120

Query: 121 VNSETRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKV 180
             SETRAEI+ELI QLEAKNPTPAPTEAL+LLN KWIL YTSFSGLFPLLSR T  L +V
Sbjct: 121 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 180

Query: 181 EEISQTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDS 240
           EEISQTIDSE FTVQNS+ F+GPLATTSISTNAKFEVRSP+RVQI FEEGVIGTPQ+TDS
Sbjct: 181 EEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDS 240

Query: 241 IVIPENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTY 300
           +V+PENVEFLGQKI+LS F GI+SS+QDTAS+V KTISSQPP+KF ISN+ A+SWLLTTY
Sbjct: 241 LVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTY 300

Query: 301 LDEDVRISRGDGGSVFVLIKEGSALLSP 323
           LDED+RISR D GSVFV IKEGS LL P
Sbjct: 301 LDEDLRISRADAGSVFVFIKEGSPLLMP 323

[Close]

BLAST of CmoCh03G005860 vs. TrEMBL
Match: B9SEJ1_RICCO (Plastid-lipid-associated protein, chloroplast, putative OS=Ricinus communis GN=RCOM_0705630 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.2e-114
Identity = 227/325 (69.85%), Postives = 259/325 (79.69%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAISARPVFKVRAV 60
           MA +SQ +Q PC+TLS  P  ++  S+P +F I    +  R     L+   RPVF +RAV
Sbjct: 1   MASISQLNQFPCKTLSTPPCNSKFTSRPSVFSIKTTTSICRPT---LSTGTRPVFSIRAV 60

Query: 61  ENDDERGEEKKRPYADGPAVAVAEEEE----KPLEQSEIYKLKKALVDSFYGTDRGLRVN 120
           + +DE G     P  +  AVAVAEEE     KP E +EI  LKK LVDSFYGTDRGL+  
Sbjct: 61  DAEDEWG-----PDYEDSAVAVAEEESEEKLKPTEVTEIDSLKKQLVDSFYGTDRGLKAT 120

Query: 121 SETRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKVEE 180
           SETRAEI+ELI QLE+KNPT APTEAL+LLNGKWILAYTSFSGLFPLLSR T  LVKVEE
Sbjct: 121 SETRAEIVELITQLESKNPTAAPTEALTLLNGKWILAYTSFSGLFPLLSRGTLPLVKVEE 180

Query: 181 ISQTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDSIV 240
           ISQTIDSE FTVQNSV FSGPLATTSISTNAKFEVRSP+RVQI F+EG+IGTPQLTDSIV
Sbjct: 181 ISQTIDSENFTVQNSVQFSGPLATTSISTNAKFEVRSPKRVQIKFDEGIIGTPQLTDSIV 240

Query: 241 IPENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTYLD 300
           +PENVEFLGQKI+L+ F GII+S+QDTAS+V KTISSQPP+K PISN  A+SWLLTTYLD
Sbjct: 241 LPENVEFLGQKIDLTPFKGIITSVQDTASSVAKTISSQPPLKIPISNNNAQSWLLTTYLD 300

Query: 301 EDVRISRGDGGSVFVLIKEGSALLS 322
           ED+RISR D GS+FVLIKEGS LL+
Sbjct: 301 EDLRISRADAGSIFVLIKEGSPLLT 317

[Close]

BLAST of CmoCh03G005860 vs. TrEMBL
Match: A0A067JD68_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21164 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 3.8e-114
Identity = 229/319 (71.79%), Postives = 251/319 (78.68%), Query Frame = 1


Query: 4   VSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAISARPVFKVRAVEND 63
           +SQ +  PC+TLS  PP +Q  S+P + P   I      +   L    RP F VRAV++D
Sbjct: 6   ISQLNHFPCKTLSKTPPNSQFNSRPSVLPFPSIKLANSISKSTLG---RPAFLVRAVDDD 65

Query: 64  DERGEEKKRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGLRVNSETRAEI 123
            E   E         AVAVAE E  P E SE+  LKK LVDSFYGTDRGL  +SETRAEI
Sbjct: 66  GESASE---------AVAVAEVEA-PKEPSEVDALKKQLVDSFYGTDRGLTASSETRAEI 125

Query: 124 LELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKVEEISQTIDS 183
           +ELI QLEAKNPT APTEAL+LLNGKWILAYTSFSGLFPLLSR    LVKVEEISQTIDS
Sbjct: 126 VELITQLEAKNPTAAPTEALTLLNGKWILAYTSFSGLFPLLSRGRLPLVKVEEISQTIDS 185

Query: 184 EGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDSIVIPENVEF 243
           E FTVQNSV FSGPLATTSISTNAKFEVRSP+RVQI FEEGVIGTPQLTDSIVIPENVEF
Sbjct: 186 ENFTVQNSVQFSGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQLTDSIVIPENVEF 245

Query: 244 LGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTYLDEDVRISR 303
           LGQKI+L+   GI++S+QDTAS+V KTISSQPP+KFPISN  AESWLLTTYLDED+RISR
Sbjct: 246 LGQKIDLTPLKGILTSVQDTASSVAKTISSQPPLKFPISNTNAESWLLTTYLDEDLRISR 305

Query: 304 GDGGSVFVLIKEGSALLSP 323
           GDGGSVFVLIKEGS LL P
Sbjct: 306 GDGGSVFVLIKEGSPLLKP 311

[Close]

BLAST of CmoCh03G005860 vs. TAIR10
Match: AT4G04020.1 (AT4G04020.1 fibrillin)

HSP 1 Score: 370.9 bits (951), Expect = 7.8e-103
Identity = 200/325 (61.54%), Postives = 255/325 (78.46%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISK-PLIFPIGPIVAGARAAAGKLAISA-RPVFKVR 60
           MA V  F+Q PC+TL+ +   T+  SK P++ PI  I         ++ +S  RP FK+R
Sbjct: 1   MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSI-----NRRSEIGVSVHRPDFKIR 60

Query: 61  AVENDDERGEEK-KRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGLRVNS 120
           A + DDE G++  +R +A    V+VA++  + +E++E  +LK++L DS YGTDRGL V+S
Sbjct: 61  ATDIDDEWGQDGVERVFASSSTVSVADKAIESVEETE--RLKRSLADSLYGTDRGLSVSS 120

Query: 121 ETRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKVEEI 180
           +TRAEI ELI QLE+KNPTPAP EAL LLNGKWILAYTSF GLFPLLSR    LVKV+EI
Sbjct: 121 DTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVDEI 180

Query: 181 SQTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDSIVI 240
           SQTIDS+ FTVQNSV F+GP +TTS STNAKFE+RSP+RVQI FE+GVIGTPQLTDSI I
Sbjct: 181 SQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEI 240

Query: 241 PENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTYLDE 300
           PE+VE LGQKI+L+   G+++S+QDTAS+V +TIS+QPP+KF + +   +SWLLTTYLD+
Sbjct: 241 PESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYLDK 300

Query: 301 DVRISRGDGGSVFVLIKEGSALLSP 323
           D+RISRGDGGSV+VLIKEGS+LL+P
Sbjct: 301 DLRISRGDGGSVYVLIKEGSSLLNP 318

[Close]

BLAST of CmoCh03G005860 vs. TAIR10
Match: AT4G22240.1 (AT4G22240.1 Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 365.5 bits (937), Expect = 3.3e-101
Identity = 197/323 (60.99%), Postives = 243/323 (75.23%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRT-LSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAISARPVFKVRA 60
           MA V   +Q  C+T +S++P    +   P + P+  I+     + G +A+S R VFKVRA
Sbjct: 1   MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSIIHRPMISTGGIAVSPRRVFKVRA 60

Query: 61  VENDDERGEEKKRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGLRVNSET 120
            +  +            G A+  AEE  + +E++E  +LK++LVDS YGTDRGL  +SET
Sbjct: 61  TDTGEI-----------GSALLAAEEAIEDVEETE--RLKRSLVDSLYGTDRGLSASSET 120

Query: 121 RAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKVEEISQ 180
           RAEI +LI QLE+KNPTPAPTEAL LLNGKWILAYTSF  LFPLLSR    L+KV+EISQ
Sbjct: 121 RAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEISQ 180

Query: 181 TIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDSIVIPE 240
           TIDS+ FTVQNSV F+GPL T SISTNAKFE+RSP+RVQI FE+GVIGTPQLTDSI IPE
Sbjct: 181 TIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPE 240

Query: 241 NVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTYLDEDV 300
            VE LGQKI+L+   G+++S+QDTAS+V +TISSQPP+KF +    A+SWLLTTYLD+D+
Sbjct: 241 YVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDI 300

Query: 301 RISRGDGGSVFVLIKEGSALLSP 323
           RISRGDGGSVFVLIKEGS LL+P
Sbjct: 301 RISRGDGGSVFVLIKEGSPLLNP 310

[Close]

BLAST of CmoCh03G005860 vs. TAIR10
Match: AT2G35490.1 (AT2G35490.1 Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 228.0 bits (580), Expect = 8.2e-60
Identity = 121/263 (46.01%), Postives = 168/263 (63.88%), Query Frame = 1


Query: 58  RAVENDDERGEEKKRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGLRVNS 117
           R +E+D  R E++      G   A A       + +  ++LK+ L DS YGT+ G +  S
Sbjct: 115 RFMESDPPRNEDEWGGEIGGETEADAGNGSAVSDPT--WELKRCLADSVYGTELGFKAGS 174

Query: 118 ETRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKVEEI 177
           E RAE+LEL+ QLEA NPTPAP E   LL+G W+L YT+FS L PLL+  +  L+KV+ I
Sbjct: 175 EVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVKSI 234

Query: 178 SQTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDSIVI 237
           SQ+ID+    + NS   S P A  S S  A FEVRSP R+++ F+EG +  P +  S+ +
Sbjct: 235 SQSIDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDL 294

Query: 238 PENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTYLDE 297
           PE+V   GQ+I LS     ++ +QD A+N+ + +S QPP+K P    +  SWLLTTYLD+
Sbjct: 295 PESVGVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLLTTYLDK 354

Query: 298 DVRISRGDGGSVFVLIKEGSALL 321
           D+RISRGDGG +FVL +EGS+LL
Sbjct: 355 DLRISRGDGG-LFVLAREGSSLL 374

[Close]

BLAST of CmoCh03G005860 vs. TAIR10
Match: AT5G09820.2 (AT5G09820.2 Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 56.6 bits (135), Expect = 3.3e-08
Identity = 48/171 (28.07%), Postives = 83/171 (48.54%), Query Frame = 1


Query: 84  EEEEKPLEQSEIYKLKKALVDSFYGTDRGL-RVNSETRAEILELIAQLEAKNPTPAPTEA 143
           EE+E+  E+  +  +K+ L ++  G +RG+  V S+ + EI  L+  LE +NPTP PT  
Sbjct: 72  EEQEQEQEEITVSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGE 131

Query: 144 LSLLNGKWILAYTSFSGLFPLLSR-------STFSLVKVEEISQ--TIDSEGFTVQNSVL 203
           L  + G W L Y++ + L    ++       S   L++  +I+Q  T+    F V+   L
Sbjct: 132 LDKIGGCWKLIYSTITVLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNL 191

Query: 204 FSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDSIVIPENVEFL 245
             G          A F++ S   V+I +E   I   QL +  +  +N++ L
Sbjct: 192 LDGEFRIV-----ASFKISSKSSVEITYESSTIKPDQLMN--IFRKNMDLL 235

[Close]

BLAST of CmoCh03G005860 vs. NCBI nr
Match: gi|659079054|ref|XP_008440050.1| (PREDICTED: chromoplast-specific carotenoid-associated protein, chromoplast [Cucumis melo])

HSP 1 Score: 511.5 bits (1316), Expect = 1.0e-141
Identity = 270/323 (83.59%), Postives = 289/323 (89.47%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAISARPVFKVRAV 60
           MAFVSQF+QLPC+TL+LNPPQ QL SKP IFPI  I AGARAAAGK  IS RP FKVRAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSIFPIASIGAGARAAAGKSLISVRPSFKVRAV 60

Query: 61  ENDDERGEEKKRPYADGPAVAVAEEEE-KPLEQSEIYKLKKALVDSFYGTDRGLRVNSET 120
            NDDE GEEK+  Y DG AVAVAEEEE KP+E SEIYKLKKALVDSFYGTDRGLRV+ +T
Sbjct: 61  LNDDEWGEEKEEKYGDGSAVAVAEEEEEKPMEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKVEEISQ 180
           RAEI+ELI QLE+KNPTPAPTEAL+LLNGKWIL YTSFSGLFPLLSR+T  LVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILQYTSFSGLFPLLSRNTLPLVKVEEISQ 180

Query: 181 TIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDSIVIPE 240
           TIDSE  TVQNSV FSGPLATTSI+TNAKFEVRSP RV I FEEGVIGTPQLTDSIVIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTYLDEDV 300
           NV+FLGQKI+LS F+GIISSIQDTASNV KTISSQPP+KF ISN K ESWLLTTYLDED+
Sbjct: 241 NVDFLGQKIDLSPFNGIISSIQDTASNVAKTISSQPPLKFSISNTKVESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLSP 323
           RISRGDGGSVFVL+KEGSALLSP
Sbjct: 301 RISRGDGGSVFVLLKEGSALLSP 323

[Close]

BLAST of CmoCh03G005860 vs. NCBI nr
Match: gi|449434000|ref|XP_004134784.1| (PREDICTED: chromoplast-specific carotenoid-associated protein, chromoplast [Cucumis sativus])

HSP 1 Score: 487.6 bits (1254), Expect = 1.6e-134
Identity = 258/322 (80.12%), Postives = 283/322 (87.89%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAISARPVFKVRAV 60
           MAFVSQF+QLPC+TL+LNPPQ QL SKP +FPI  I A ARAAAGK  IS RP FKVRAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISVRPAFKVRAV 60

Query: 61  ENDDERGEEKKRPYADGPAVAVAE-EEEKPLEQSEIYKLKKALVDSFYGTDRGLRVNSET 120
            NDDE GE+K   Y D  +VAVAE EEEKPLE SEIYKLKKALVDSFYGTDRGLRV+ +T
Sbjct: 61  LNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKVEEISQ 180
           RAEI+ELI QLE+KNPTPAPTEAL+LLNGKWILAYT+F+GLFPLLSR+   LVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVKVEEISQ 180

Query: 181 TIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDSIVIPE 240
           TIDSE  TVQNSV FSGPLATTSI+TNAKFEVRSP RV I FEEGVIGTPQLTDSIVIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTYLDEDV 300
           NV+FLGQKI+ + F+GIISS+QDTASNV KTISSQPPIKF ISN + ESWLLTTYLDED+
Sbjct: 241 NVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLS 322
           RISRGDGGSVFVL+KEGS+ LS
Sbjct: 301 RISRGDGGSVFVLLKEGSSFLS 321

[Close]

BLAST of CmoCh03G005860 vs. NCBI nr
Match: gi|1009180976|ref|XP_015871918.1| (PREDICTED: plastid-lipid-associated protein, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 431.8 bits (1109), Expect = 1.1e-117
Identity = 234/328 (71.34%), Postives = 270/328 (82.32%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAG-----KLAISARPVF 60
           MA VSQ +Q PC+T +  PP+    SK  + P+  I   +R   G     + +  AR VF
Sbjct: 1   MAGVSQLNQFPCKTFTATPPRHH--SKTSL-PVASIGVPSRLGDGPRLSTRESNRARLVF 60

Query: 61  KVRAVENDDERGEEKKRPYADGPAVAVAEEEE---KPLEQSEIYKLKKALVDSFYGTDRG 120
           +VRAV +DDE G EK+ PY +G AVAVAEEEE   K +E +EI +LKKALVDSFYGTDRG
Sbjct: 61  RVRAVTDDDEWGPEKEEPYGEGSAVAVAEEEEEEEKKVEPAEIARLKKALVDSFYGTDRG 120

Query: 121 LRVNSETRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLV 180
           LR +SETRAEI+ELI QLEA+NP PAPTEAL+LLNGKWILAYTSFSGLFPLLSR T  LV
Sbjct: 121 LRASSETRAEIVELITQLEAQNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGTLPLV 180

Query: 181 KVEEISQTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLT 240
           KVEEISQTIDSE  TVQNSVLFSGPLATTSISTNAKFE+RSP+RVQI FEEG+IGTPQLT
Sbjct: 181 KVEEISQTIDSENLTVQNSVLFSGPLATTSISTNAKFEIRSPKRVQIKFEEGIIGTPQLT 240

Query: 241 DSIVIPENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLT 300
           DSI +PENVE LGQKI+L+ F G+I+S+QDTAS+VVKTISSQPP+K PISN+ A+SWLLT
Sbjct: 241 DSIEVPENVEILGQKIDLAPFKGLITSVQDTASSVVKTISSQPPLKIPISNSNAQSWLLT 300

Query: 301 TYLDEDVRISRGDGGSVFVLIKEGSALL 321
           TYLDE++RISRGD GSVFVLIKEGS+LL
Sbjct: 301 TYLDEELRISRGDAGSVFVLIKEGSSLL 325

[Close]

BLAST of CmoCh03G005860 vs. NCBI nr
Match: gi|985433661|ref|XP_006467367.2| (PREDICTED: plastid-lipid-associated protein, chloroplastic [Citrus sinensis])

HSP 1 Score: 422.5 bits (1085), Expect = 6.4e-115
Identity = 231/328 (70.43%), Postives = 263/328 (80.18%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAIS------ARPV 60
           MA +SQ +Q PC+TLS NPP  Q  SKP I P+  +   +R+ A K  +S      ARP+
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRI-SRSLAKKSFLSIQGFTRARPL 60

Query: 61  FKVRAVENDDERGEEKKRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGLR 120
              RA + DDE G EK++   +G A+AVAEEE  P E +EI  LKKALVDSFYGTDRGL 
Sbjct: 61  VLTRAAD-DDEWGPEKEKE--EGGALAVAEEES-PKEVTEIDNLKKALVDSFYGTDRGLN 120

Query: 121 VNSETRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKV 180
             SETRAEI+ELI QLEAKNPTPAPTEAL+LLN KWIL YTSFSGLFPLLSR T  L +V
Sbjct: 121 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 180

Query: 181 EEISQTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDS 240
           EEISQTIDSE FTVQNS+ F+GPLATTSISTNAKFEVRSP+RVQI FEEG+IGTPQ+TDS
Sbjct: 181 EEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDS 240

Query: 241 IVIPENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTY 300
           +VIPENVEFLGQKI+LS F GI+SS+QDTAS+V KTISSQPP+KF ISN+ A+SWLLTTY
Sbjct: 241 LVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTY 300

Query: 301 LDEDVRISRGDGGSVFVLIKEGSALLSP 323
           LDED+RISR D GSVFV IKEGS LL P
Sbjct: 301 LDEDLRISRADAGSVFVFIKEGSPLLMP 323

[Close]

BLAST of CmoCh03G005860 vs. NCBI nr
Match: gi|567915009|ref|XP_006449818.1| (hypothetical protein CICLE_v10015934mg [Citrus clementina])

HSP 1 Score: 421.0 bits (1081), Expect = 1.9e-114
Identity = 231/328 (70.43%), Postives = 262/328 (79.88%), Query Frame = 1


Query: 1   MAFVSQFSQLPCRTLSLNPPQTQLISKPLIFPIGPIVAGARAAAGKLAIS------ARPV 60
           MA +SQ +Q PC+TLS NPP  Q  SKP I P+  +   +R+ A K  +S      ARP+
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRI-SRSLAKKSFLSIQGFTRARPL 60

Query: 61  FKVRAVENDDERGEEKKRPYADGPAVAVAEEEEKPLEQSEIYKLKKALVDSFYGTDRGLR 120
              RA + DDE G EK++    G A+AVAEEE  P E +EI  LKKALVDSFYGTDRGL 
Sbjct: 61  VLTRAAD-DDEWGPEKEKE--GGGALAVAEEES-PKEVTEIDNLKKALVDSFYGTDRGLN 120

Query: 121 VNSETRAEILELIAQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLFPLLSRSTFSLVKV 180
             SETRAEI+ELI QLEAKNPTPAPTEAL+LLN KWIL YTSFSGLFPLLSR T  L +V
Sbjct: 121 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 180

Query: 181 EEISQTIDSEGFTVQNSVLFSGPLATTSISTNAKFEVRSPQRVQIMFEEGVIGTPQLTDS 240
           EEISQTIDSE FTVQNS+ F+GPLATTSISTNAKFEVRSP+RVQI FEEGVIGTPQ+TDS
Sbjct: 181 EEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDS 240

Query: 241 IVIPENVEFLGQKIELSAFSGIISSIQDTASNVVKTISSQPPIKFPISNAKAESWLLTTY 300
           +V+PENVEFLGQKI+LS F GI+SS+QDTAS+V KTISSQPP+KF ISN+ A+SWLLTTY
Sbjct: 241 LVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTY 300

Query: 301 LDEDVRISRGDGGSVFVLIKEGSALLSP 323
           LDED+RISR D GSVFV IKEGS LL P
Sbjct: 301 LDEDLRISRADAGSVFVFIKEGSPLLMP 323

The following BLAST results are available for this feature:

BLAST of CmoCh03G005860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CHRC_CUCSA	1.0e-136	80.12	Chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis sat...	[more]
PAP_CITUN	1.2e-116	70.43	Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=...	[more]
LIPC_SOLTU	1.3e-107	65.35	Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2	[more]
LIPC_SOLDE	2.9e-107	65.05	Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1	[more]
PAP2_BRACM	1.6e-102	62.35	Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2...	[more]

BLAST of CmoCh03G005860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL49_CUCSA	1.1e-134	80.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512870 PE=4 SV=1	[more]
A0A067GF90_CITSI	4.5e-115	70.43	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020639mg PE=4 SV=1	[more]
V4TR92_9ROSI	1.3e-114	70.43	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015934mg PE=4 SV=1	[more]
B9SEJ1_RICCO	2.2e-114	69.85	Plastid-lipid-associated protein, chloroplast, putative OS=Ricinus communis GN=R...	[more]
A0A067JD68_JATCU	3.8e-114	71.79	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21164 PE=4 SV=1	[more]

BLAST of CmoCh03G005860 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G04020.1	7.8e-103	61.54	fibrillin	[more]
AT4G22240.1	3.3e-101	60.99	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT2G35490.1	8.2e-60	46.01	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT5G09820.2	3.3e-08	28.07	Plastid-lipid associated protein PAP / fibrillin family protein	[more]

BLAST of CmoCh03G005860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079054\|ref\|XP_008440050.1\|	1.0e-141	83.59	PREDICTED: chromoplast-specific carotenoid-associated protein, chromoplast [Cucu...	[more]
gi\|449434000\|ref\|XP_004134784.1\|	1.6e-134	80.12	PREDICTED: chromoplast-specific carotenoid-associated protein, chromoplast [Cucu...	[more]
gi\|1009180976\|ref\|XP_015871918.1\|	1.1e-117	71.34	PREDICTED: plastid-lipid-associated protein, chloroplastic-like [Ziziphus jujuba...	[more]
gi\|985433661\|ref\|XP_006467367.2\|	6.4e-115	70.43	PREDICTED: plastid-lipid-associated protein, chloroplastic [Citrus sinensis]	[more]
gi\|567915009\|ref\|XP_006449818.1\|	1.9e-114	70.43	hypothetical protein CICLE_v10015934mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006843	PAP/fibrillin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009509	chromoplast
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G005860.1	CmoCh03G005860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006843	Plastid lipid-associated protein/fibrillin conserved domain	PFAM	PF04755	PAP_fibrillin	coord: 97..312 score: 5.1
None	No IPR available	PANTHER	PTHR31906	FAMILY NOT NAMED	coord: 57..320 score: 6.3
None	No IPR available	PANTHER	PTHR31906:SF5	PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED	coord: 57..320 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G005860	Cucsa.044900	Cucumber (Gy14) v1	cgycmoB0042
CmoCh03G005860	CmaCh03G005600	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G005860	CmaCh07G003350	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G005860	Cla014416	Watermelon (97103) v1	cmowmB623
CmoCh03G005860	Csa6G512870	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G005860	MELO3C007423	Melon (DHL92) v3.5.1	cmomeB600
CmoCh03G005860	ClCG01G021610	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G005860	CSPI06G33190	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G005860	Lsi01G004630	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G005860	Cp4.1LG10g09800	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G005860	Cp4.1LG19g08110	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G005860	MELO3C007423.2	Melon (DHL92) v3.6.1	cmomedB686
CmoCh03G005860	CsaV3_6G048650	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G005860	Cla97C01G021210	Watermelon (97103) v2	cmowmbB642
CmoCh03G005860	Bhi03G000480	Wax gourd	cmowgoB0781
CmoCh03G005860	CsGy6G032770	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G005860	Carg13669	Silver-seed gourd	carcmoB1246
CmoCh03G005860	Carg07863	Silver-seed gourd	carcmoB0886

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G005860	CmoCh07G003240	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G005860	Cucurbita pepo (Zucchini)	cmocpeB630
CmoCh03G005860	Cucurbita maxima (Rimu)	cmacmoB419