Carg07863 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07863
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Plastid-lipid-associated protein, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_066 : 521202 .. 523051 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTGTTTCTCAATTCAATCAACTTCCGTGCAAGACTCTCTCACTGAATCCACCGCAACCTCAGCCGATTTCTAAGCCCTCGATTTTCCCCATCAGCTCGATTGGGGTTGGAGCCAGAGTAGCGGCGGGGAAGTCGGCAATCTCGGCTAGACCTGCGTTCAAGATCCGTGCGGTGGGGAACGATGACGAGTGGGGGGAGGAGAAGGTGGAGCCTTACGATGATGGTTCGGCTGTTGCGGTCGCTGAAGAGGAGCCTCTGGAGCAATCGGAGATCTATAAACTGAAGAAGGCGTTGGTGGACTCGTTTTACGGGACCGATCGTGGATTAAGAGCGTCTAGCGAAACTAGAGCGGAGATTGTGGAGCTGATTACGCAACTGGAAGCGAAGAACCCTACACCAGCTCCTACGGAGGCCCTAACTCTGCTCAACGGCAAATGGATTCTCGCGTAAGTGCCCTAATCATATCGTAACCTAGTTTGTTATTTCTCTTAACAGTGCAATTTATAAACGGCTTCCTATAATACTATATGAACGAACAAGTTTAATCGAATTTCTGGATTTCTCTGATGGGATTTGAAACTTGAAATTCAGGTGATTGTAACTTCCCTAACATCTTGTTCTGTATAAATTTCTGTAAAGGCTGTTTCTAGTACTTTTGGAAGCGTTTCTGCATTAGAAATTTGTTGTCATCATAGGTTTCTCAACATGAATGTTTGGGGTTGTAGGTACACATCGTTCTCGGGTCTGTTCCCATTGTTGTCTAGGAGTACATTTCCATTGGTGAAAGTGGAAGAAATTTCACAGACAATTGATTCAGAGAGCTTCACTGTTCAAAACTCTGTCCAGTTTTCTGGCCCTCTGGCTACCACTTCCATTAGTACTAATGCAAAGTTTGAAGTTCGAAGTCCTCAGCGCGTACAGGTAAAGCTAGAACAAATCTGCCTTTGACCCGGCAGTCTGAACCCAGAAAAGTTAGGATTTTCTCGTCTGTTTGGGGATTTCAACTCTTTTGACTTTGTAATCAGCTAATATTTGCTTTTCCCACAACTATGTTTCCAGATCAAGTTTGAAGAAGGCGTCATTGGGACACCCCAGCTGACGGATTCAATAGTGATACCAGAGAATGTGGAGTTTCTTGGACAAAAGATCGATCTTTCACCATTCAATGGCATCATATCCTCCATCCAAAACACTGCTTCAAATGTGGCGAAGACAATTTCTAGCCAACCACCAATCAAGTTCTCGATCCCAAACACGAAACCAGAGTCGTGGTTGCTAACTACTTATCTCGACGAAGATCTTCGAATTTCACGGGGAGATGTTGGTAGTGTGTTCGTACTCATCAAGGAAGGCAGCGCTCTCTTATCACCCTGATCAAATACTATTATTGTCTTTGCTAAGGGAATGTTGTTTAAAGGGTTCATAGGAAAACTAAATTGTTATCTAAAGATGGTGTAGCAAGTGTTGTAGTTGAACCACATATAGTAAATGGTATCGCCTGCTGTTTAAATGGCCAGCTTCAGTTAGCCATGCCTTCTTTTACATTGTAGTCACTTAACATTTGGATCGAAGTGGTAGTGGAAATGACCCTTTTGATCTGATCACACATCTCCTTCAACATGGAGACAAGGGATTCTTCGCGATTAAGTTCGTCAATCATGCACATCAGGTCATACAAGCCATTCAATTGGTTTTGGATTGTTTTGATCAAGTCACAATCACAATCACAATCAGTTTATTTTTTTAATTTCTCTGTTCTAACGAGAGAACTATAATCGAGCAGGATTTTAATCCACCCATTAAAAGTCCAGAGCTTTCCAGAATCCAAATTACTTTTCCAAAAT

mRNA sequence

ATGGCGTTTGTTTCTCAATTCAATCAACTTCCGTGCAAGACTCTCTCACTGAATCCACCGCAACCTCAGCCGATTTCTAAGCCCTCGATTTTCCCCATCAGCTCGATTGGGGTTGGAGCCAGAGTAGCGGCGGGGAAGTCGGCAATCTCGGCTAGACCTGCGTTCAAGATCCGTGCGGTGGGGAACGATGACGAGTGGGGGGAGGAGAAGGTGGAGCCTTACGATGATGGTTCGGCTGTTGCGGTCGCTGAAGAGGAGCCTCTGGAGCAATCGGAGATCTATAAACTGAAGAAGGCGTTGGTGGACTCGTTTTACGGGACCGATCGTGGATTAAGAGCGTCTAGCGAAACTAGAGCGGAGATTGTGGAGCTGATTACGCAACTGGAAGCGAAGAACCCTACACCAGCTCCTACGGAGGCCCTAACTCTGCTCAACGGCAAATGGATTCTCGCGTACACATCGTTCTCGGGTCTGTTCCCATTGTTGTCTAGGAGTACATTTCCATTGGTGAAAGTGGAAGAAATTTCACAGACAATTGATTCAGAGAGCTTCACTGTTCAAAACTCTGTCCAGTTTTCTGGCCCTCTGGCTACCACTTCCATTAGTACTAATGCAAAGTTTGAAGTTCGAAGTCCTCAGCGCGTACAGATCAAGTTTGAAGAAGGCGTCATTGGGACACCCCAGCTGACGGATTCAATAGTGATACCAGAGAATGTGGAGTTTCTTGGACAAAAGATCGATCTTTCACCATTCAATGGCATCATATCCTCCATCCAAAACACTGCTTCAAATGTGGCGAAGACAATTTCTAGCCAACCACCAATCAAGTTCTCGATCCCAAACACGAAACCAGAGTCGTGGTTGCTAACTACTTATCTCGACGAAGATCTTCGAATTTCACGGGGAGATGTTGGTAGTGTGTTCGTACTCATCAAGGAAGGCAGCGCTCTCTTATCACCCTGATCAAATACTATTATTGTCTTTGCTAAGGGAATGTTGTTTAAAGGGTTCATAGGAAAACTAAATTGTTATCTAAAGATGGTGTAGCAAGTGTTGTAGTTGAACCACATATAGTAAATGGTATCGCCTGCTGTTTAAATGGCCAGCTTCAGTTAGCCATGCCTTCTTTTACATTGTAGTCACTTAACATTTGGATCGAAGTGGTAGTGGAAATGACCCTTTTGATCTGATCACACATCTCCTTCAACATGGAGACAAGGGATTCTTCGCGATTAAGTTCGTCAATCATGCACATCAGGTCATACAAGCCATTCAATTGGTTTTGGATTGTTTTGATCAAGTCACAATCACAATCACAATCAGTTTATTTTTTTAATTTCTCTGTTCTAACGAGAGAACTATAATCGAGCAGGATTTTAATCCACCCATTAAAAGTCCAGAGCTTTCCAGAATCCAAATTACTTTTCCAAAAT

Coding sequence (CDS)

ATGGCGTTTGTTTCTCAATTCAATCAACTTCCGTGCAAGACTCTCTCACTGAATCCACCGCAACCTCAGCCGATTTCTAAGCCCTCGATTTTCCCCATCAGCTCGATTGGGGTTGGAGCCAGAGTAGCGGCGGGGAAGTCGGCAATCTCGGCTAGACCTGCGTTCAAGATCCGTGCGGTGGGGAACGATGACGAGTGGGGGGAGGAGAAGGTGGAGCCTTACGATGATGGTTCGGCTGTTGCGGTCGCTGAAGAGGAGCCTCTGGAGCAATCGGAGATCTATAAACTGAAGAAGGCGTTGGTGGACTCGTTTTACGGGACCGATCGTGGATTAAGAGCGTCTAGCGAAACTAGAGCGGAGATTGTGGAGCTGATTACGCAACTGGAAGCGAAGAACCCTACACCAGCTCCTACGGAGGCCCTAACTCTGCTCAACGGCAAATGGATTCTCGCGTACACATCGTTCTCGGGTCTGTTCCCATTGTTGTCTAGGAGTACATTTCCATTGGTGAAAGTGGAAGAAATTTCACAGACAATTGATTCAGAGAGCTTCACTGTTCAAAACTCTGTCCAGTTTTCTGGCCCTCTGGCTACCACTTCCATTAGTACTAATGCAAAGTTTGAAGTTCGAAGTCCTCAGCGCGTACAGATCAAGTTTGAAGAAGGCGTCATTGGGACACCCCAGCTGACGGATTCAATAGTGATACCAGAGAATGTGGAGTTTCTTGGACAAAAGATCGATCTTTCACCATTCAATGGCATCATATCCTCCATCCAAAACACTGCTTCAAATGTGGCGAAGACAATTTCTAGCCAACCACCAATCAAGTTCTCGATCCCAAACACGAAACCAGAGTCGTGGTTGCTAACTACTTATCTCGACGAAGATCTTCGAATTTCACGGGGAGATGTTGGTAGTGTGTTCGTACTCATCAAGGAAGGCAGCGCTCTCTTATCACCCTGA

Protein sequence

MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAISARPAFKIRAVGNDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRISRGDVGSVFVLIKEGSALLSP

Homology

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BLAST of Carg07863 vs. NCBI nr
Match: XP_022926829.1 (chromoplast-specific carotenoid-associated protein, chromoplastic-like [Cucurbita moschata])

HSP 1 Score: 614.0 bits (1582), Expect = 2.9e-172
Identity = 319/320 (99.69%), Postives = 319/320 (99.69%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAISARPAFKIRAV 60
           MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIG GARVAAGKSAISARPAFKIRAV
Sbjct: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGAGARVAAGKSAISARPAFKIRAV 60

Query: 61  GNDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRAE 120
           GNDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRAE
Sbjct: 61  GNDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRAE 120

Query: 121 IVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTID 180
           IVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTID
Sbjct: 121 IVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTID 180

Query: 181 SESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVE 240
           SESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVE
Sbjct: 181 SESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVE 240

Query: 241 FLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRIS 300
           FLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRIS
Sbjct: 241 FLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRIS 300

Query: 301 RGDVGSVFVLIKEGSALLSP 321
           RGDVGSVFVLIKEGSALLSP
Sbjct: 301 RGDVGSVFVLIKEGSALLSP 320

[Close]

BLAST of Carg07863 vs. NCBI nr
Match: XP_023003471.1 (chromoplast-specific carotenoid-associated protein, chromoplastic-like [Cucurbita maxima])

HSP 1 Score: 610.1 bits (1572), Expect = 4.2e-171
Identity = 317/320 (99.06%), Postives = 317/320 (99.06%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAISARPAFKIRAV 60
           MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIG GARVAAGKSAISARP FKIRAV
Sbjct: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGAGARVAAGKSAISARPVFKIRAV 60

Query: 61  GNDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRAE 120
           GNDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRAE
Sbjct: 61  GNDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRAE 120

Query: 121 IVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTID 180
           IVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTID
Sbjct: 121 IVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTID 180

Query: 181 SESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVE 240
           SESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVE
Sbjct: 181 SESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVE 240

Query: 241 FLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRIS 300
           FLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRIS
Sbjct: 241 FLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRIS 300

Query: 301 RGDVGSVFVLIKEGSALLSP 321
           RGDVGSVFVLIKEGSALL P
Sbjct: 301 RGDVGSVFVLIKEGSALLLP 320

[Close]

BLAST of Carg07863 vs. NCBI nr
Match: XP_023518403.1 (chromoplast-specific carotenoid-associated protein, chromoplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 600.9 bits (1548), Expect = 2.5e-168
Identity = 312/320 (97.50%), Postives = 314/320 (98.12%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAISARPAFKIRAV 60
           MAFVSQFNQLPCKTLSLNPPQP PISKPSI P+SSIGVGARVAAGKSAISARP  KIRAV
Sbjct: 1   MAFVSQFNQLPCKTLSLNPPQPHPISKPSILPLSSIGVGARVAAGKSAISARPVCKIRAV 60

Query: 61  GNDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRAE 120
           GNDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRAE
Sbjct: 61  GNDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRAE 120

Query: 121 IVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTID 180
           IVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTID
Sbjct: 121 IVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTID 180

Query: 181 SESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVE 240
           SE FTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVE
Sbjct: 181 SEGFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVE 240

Query: 241 FLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRIS 300
           FLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRIS
Sbjct: 241 FLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRIS 300

Query: 301 RGDVGSVFVLIKEGSALLSP 321
           RGDVGSVFVLIKEGS+LL P
Sbjct: 301 RGDVGSVFVLIKEGSSLLLP 320

[Close]

BLAST of Carg07863 vs. NCBI nr
Match: XP_022132925.1 (chromoplast-specific carotenoid-associated protein, chromoplastic [Momordica charantia])

HSP 1 Score: 536.6 bits (1381), Expect = 5.9e-149
Identity = 288/328 (87.80%), Postives = 300/328 (91.46%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAIS------ARPA 60
           MAFVSQFNQLPCKTLSLNPP PQ  SKPSIF I+SIG GAR AAGKSAIS      ARPA
Sbjct: 1   MAFVSQFNQLPCKTLSLNPPHPQLSSKPSIFTINSIGTGAR-AAGKSAISAREFVWARPA 60

Query: 61  FKIRAVGNDDEWGEEKVEPYDDGSAVAVAEEE--PLEQSEIYKLKKALVDSFYGTDRGLR 120
           FK+RAV NDDEWG EK EP+ DGS VAVAEEE  PLE SEIY+LKKALVDSFYGTDRGL 
Sbjct: 61  FKVRAVENDDEWGYEKEEPFGDGSGVAVAEEEEKPLEPSEIYRLKKALVDSFYGTDRGLG 120

Query: 121 ASSETRAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKV 180
           ASSETRAEIVELITQLEAKNPTPAPTEA++LLNGKWILAYTSFSGLFPLLSRST PLVKV
Sbjct: 121 ASSETRAEIVELITQLEAKNPTPAPTEAISLLNGKWILAYTSFSGLFPLLSRSTLPLVKV 180

Query: 181 EEISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDS 240
           EEISQTIDSE FTVQNSVQFSGPLATTSISTNA FEVRSPQRVQIKFEEGVIGTPQLTDS
Sbjct: 181 EEISQTIDSEGFTVQNSVQFSGPLATTSISTNATFEVRSPQRVQIKFEEGVIGTPQLTDS 240

Query: 241 IVIPENVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTY 300
           +VIPENVEF GQKIDL+PF+GIISSI+NTAS+VAKTISSQPPIKFSI NTK ESWLLTTY
Sbjct: 241 LVIPENVEFFGQKIDLTPFHGIISSIENTASSVAKTISSQPPIKFSISNTKAESWLLTTY 300

Query: 301 LDEDLRISRGDVGSVFVLIKEGSALLSP 321
           LDEDLRISRGD GSV+VLIKEGSALLSP
Sbjct: 301 LDEDLRISRGDGGSVYVLIKEGSALLSP 327

[Close]

BLAST of Carg07863 vs. NCBI nr
Match: XP_008440050.1 (PREDICTED: chromoplast-specific carotenoid-associated protein, chromoplastic [Cucumis melo])

HSP 1 Score: 531.6 bits (1368), Expect = 1.9e-147
Identity = 278/323 (86.07%), Postives = 294/323 (91.02%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAISARPAFKIRAV 60
           MAFVSQFNQLPCKTL+LNPPQPQ  SKPSIFPI+SIG GAR AAGKS IS RP+FK+RAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSIFPIASIGAGARAAAGKSLISVRPSFKVRAV 60

Query: 61  GNDDEWGEEKVEPYDDGSAV---AVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSET 120
            NDDEWGEEK E Y DGSAV        +P+E SEIYKLKKALVDSFYGTDRGLR S +T
Sbjct: 61  LNDDEWGEEKEEKYGDGSAVXXXXXXXXKPMEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQ 180
           RAEIVELITQLE+KNPTPAPTEALTLLNGKWIL YTSFSGLFPLLSR+T PLVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILQYTSFSGLFPLLSRNTLPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPE 240
           TIDSE+ TVQNSVQFSGPLATTSI+TNAKFEVRSP RV IKFEEGVIGTPQLTDSIVIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDL 300
           NV+FLGQKIDLSPFNGIISSIQ+TASNVAKTISSQPP+KFSI NTK ESWLLTTYLDEDL
Sbjct: 241 NVDFLGQKIDLSPFNGIISSIQDTASNVAKTISSQPPLKFSISNTKVESWLLTTYLDEDL 300

Query: 301 RISRGDVGSVFVLIKEGSALLSP 321
           RISRGD GSVFVL+KEGSALLSP
Sbjct: 301 RISRGDGGSVFVLLKEGSALLSP 323

[Close]

BLAST of Carg07863 vs. TAIR10
Match: AT4G04020.1 (fibrillin)

HSP 1 Score: 392.5 bits (1007), Expect = 2.5e-109
Identity = 210/322 (65.22%), Postives = 254/322 (78.88%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISK-PSIFPISSIGVGARVAAGKSAISARPAFKIRA 60
           MA V  F Q PCKTL+ +    +  SK P + PI+SI   + +         RP FKIRA
Sbjct: 1   MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSINRRSEIGVSVH----RPDFKIRA 60

Query: 61  VGNDDEWGEEKVE-PYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETR 120
              DDEWG++ VE  +   S V+VA++      E  +LK++L DS YGTDRGL  SS+TR
Sbjct: 61  TDIDDEWGQDGVERVFASSSTVSVADKAIESVEETERLKRSLADSLYGTDRGLSVSSDTR 120

Query: 121 AEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQT 180
           AEI ELITQLE+KNPTPAP EAL LLNGKWILAYTSF GLFPLLSR   PLVKV+EISQT
Sbjct: 121 AEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVDEISQT 180

Query: 181 IDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPEN 240
           IDS+SFTVQNSV+F+GP +TTS STNAKFE+RSP+RVQIKFE+GVIGTPQLTDSI IPE+
Sbjct: 181 IDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPES 240

Query: 241 VEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLR 300
           VE LGQKIDL+P  G+++S+Q+TAS+VA+TIS+QPP+KFS+P+   +SWLLTTYLD+DLR
Sbjct: 241 VEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYLDKDLR 300

Query: 301 ISRGDVGSVFVLIKEGSALLSP 321
           ISRGD GSV+VLIKEGS+LL+P
Sbjct: 301 ISRGDGGSVYVLIKEGSSLLNP 318

[Close]

BLAST of Carg07863 vs. TAIR10
Match: AT4G22240.1 (Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 377.5 bits (968), Expect = 8.3e-105
Identity = 205/321 (63.86%), Postives = 246/321 (76.64%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPS-IFPISSIGVGARVAAGKSAISARPAFKIRA 60
           MA V    Q  C+T     P  + ISKP  + P++SI     ++ G  A+S R  FK+RA
Sbjct: 1   MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSIIHRPMISTGGIAVSPRRVFKVRA 60

Query: 61  VGNDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRA 120
                       +  + GSA+  AEE   +  E  +LK++LVDS YGTDRGL ASSETRA
Sbjct: 61  -----------TDTGEIGSALLAAEEAIEDVEETERLKRSLVDSLYGTDRGLSASSETRA 120

Query: 121 EIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTI 180
           EI +LITQLE+KNPTPAPTEAL LLNGKWILAYTSF  LFPLLSR   PL+KV+EISQTI
Sbjct: 121 EIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEISQTI 180

Query: 181 DSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENV 240
           DS++FTVQNSV+F+GPL T SISTNAKFE+RSP+RVQIKFE+GVIGTPQLTDSI IPE V
Sbjct: 181 DSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYV 240

Query: 241 EFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRI 300
           E LGQKIDL+P  G+++S+Q+TAS+VA+TISSQPP+KFS+P    +SWLLTTYLD+D+RI
Sbjct: 241 EVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDIRI 300

Query: 301 SRGDVGSVFVLIKEGSALLSP 321
           SRGD GSVFVLIKEGS LL+P
Sbjct: 301 SRGDGGSVFVLIKEGSPLLNP 310

[Close]

BLAST of Carg07863 vs. TAIR10
Match: AT2G35490.1 (Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 235.7 bits (600), Expect = 3.9e-62
Identity = 122/257 (47.47%), Postives = 167/257 (64.98%), Query Frame = 0


Query: 62  NDDEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSETRAEI 121
           N+DEWG E       G   A A          ++LK+ L DS YGT+ G +A SE RAE+
Sbjct: 124 NEDEWGGE-----IGGETEADAGNGSAVSDPTWELKRCLADSVYGTELGFKAGSEVRAEV 183

Query: 122 VELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQTIDS 181
           +EL+ QLEA NPTPAP E   LL+G W+L YT+FS L PLL+  + PL+KV+ ISQ+ID+
Sbjct: 184 LELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVKSISQSIDT 243

Query: 182 ESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVEF 241
            +  + NS   S P A  S S  A FEVRSP R+++ F+EG +  P +  S+ +PE+V  
Sbjct: 244 NNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDLPESVGV 303

Query: 242 LGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDLRISR 301
            GQ+I LS     ++ +Q+ A+N+++ +S QPP+K   P  +  SWLLTTYLD+DLRISR
Sbjct: 304 FGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLLTTYLDKDLRISR 363

Query: 302 GDVGSVFVLIKEGSALL 319
           GD G +FVL +EGS+LL
Sbjct: 364 GD-GGLFVLAREGSSLL 374

[Close]

BLAST of Carg07863 vs. TAIR10
Match: AT5G09820.2 (Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-08
Identity = 57/220 (25.91%), Postives = 92/220 (41.82%), Query Frame = 0


Query: 96  LKKALVDSFYGTDRGL-RASSETRAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTS 155
           +K+ L ++  G +RG+    S+ + EI  L+  LE +NPTP PT  L  + G W L Y++
Sbjct: 86  IKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLIYST 145

Query: 156 FSGLFPLLSR-STFPLVKVEEISQTIDSESFTVQNSVQFSG---PLATTSISTNAKFEVR 215
            + L    ++      V + ++ Q ID       + ++F      L        A F++ 
Sbjct: 146 ITVLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGEFRIVASFKIS 205

Query: 216 SPQRVQIKFEEGVIGTPQLTDSIVIPENVEFLGQKIDLSPFNGIISSIQNTASNVAKTIS 275
           S   V+I +E   I   QL +  +  +N++ L     L  FN                  
Sbjct: 206 SKSSVEITYESSTIKPDQLMN--IFRKNMDLL-----LGIFN------------------ 265

Query: 276 SQPPIKFSIPNTKPESWLLTTYLDEDLRISRGDVGSVFVL 311
                        PE     +YLDEDL++ R   G+VFVL
Sbjct: 266 -------------PEGLFEISYLDEDLQVGRDGKGNVFVL 267

[Close]

BLAST of Carg07863 vs. TAIR10
Match: AT1G51110.1 (Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 50.1 bits (118), Expect = 3.0e-06
Identity = 58/231 (25.11%), Postives = 97/231 (41.99%), Query Frame = 0


Query: 89  EQSEIYKLKKALVDSFYGTD-RGLRASSETRAEIVELITQLEAKNPTPAPTEALTLLNGK 148
           +QS     +  L+D+  G   RG  AS +   ++   +  LE       PT++  L+ G+
Sbjct: 67  QQSSFNDAELKLIDALIGIQGRGKSASPKQLNDVESAVKVLEGLEGIQNPTDS-DLIEGR 126

Query: 149 WILAYTSFSGLFPLLSRSTFPLVKVEEISQTIDSESFT---VQNSVQFSGPLATTSISTN 208
           W L +T+  G    + R TF  V V  + Q +  ++     V N V+FS  +    +   
Sbjct: 127 WRLMFTTRPGTASPIQR-TFTGVDVFTVFQDVYLKATNDPRVSNIVKFSDFIG--ELKVE 186

Query: 209 AKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPENVEFLGQKIDLSPFNGIISSIQNTASN 268
           A   ++  +RV  +F+                 +++FL  K+   P+             
Sbjct: 187 AVASIKDGKRVLFRFDRAAF-------------DLKFLPFKV---PY------------- 246

Query: 269 VAKTISSQPPIKFSIPNTKPESWLLTTYLDE--DLRISRGDVGSVFVLIKE 314
                    P+ F +   + + WL TTYL    +LRISRG+ G+ FVL KE
Sbjct: 247 ---------PVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKE 255

[Close]

BLAST of Carg07863 vs. Swiss-Prot
Match: sp|Q96398|CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis sativus OX=3659 GN=CHRC PE=1 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 5.4e-146
Identity = 272/322 (84.47%), Postives = 294/322 (91.30%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAISARPAFKIRAV 60
           MAFVSQFNQLPCKTL+LNPPQPQ  SKPS+FPI+SIG  AR AAGKS IS RPAFK+RAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISVRPAFKVRAV 60

Query: 61  GNDDEWGEEKVEPYDDGSAVAVA---EEEPLEQSEIYKLKKALVDSFYGTDRGLRASSET 120
            NDDEWGE+K E Y D S+VAVA   EE+PLE SEIYKLKKALVDSFYGTDRGLR S +T
Sbjct: 61  LNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQ 180
           RAEIVELITQLE+KNPTPAPTEALTLLNGKWILAYT+F+GLFPLLSR+  PLVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPE 240
           TIDSE+ TVQNSVQFSGPLATTSI+TNAKFEVRSP RV IKFEEGVIGTPQLTDSIVIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDL 300
           NV+FLGQKID +PFNGIISS+Q+TASNVAKTISSQPPIKFSI NT+ ESWLLTTYLDEDL
Sbjct: 241 NVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDL 300

Query: 301 RISRGDVGSVFVLIKEGSALLS 320
           RISRGD GSVFVL+KEGS+ LS
Sbjct: 301 RISRGDGGSVFVLLKEGSSFLS 321

[Close]

BLAST of Carg07863 vs. Swiss-Prot
Match: sp|Q9ZWQ8|PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu OX=55188 GN=PAP PE=2 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 4.8e-126
Identity = 246/327 (75.23%), Postives = 274/327 (83.79%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAIS------ARPA 60
           MA +SQ NQ PCKTLS NPP  Q  SKPSI P++S+ + +R  A KS +S      ARP 
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRI-SRSLAKKSFLSIQGFTRARPL 60

Query: 61  FKIRAVGNDDEWGEEKVEPYDDGSAVAVAEEE-PLEQSEIYKLKKALVDSFYGTDRGLRA 120
              RA  +DDEWG EK +  + G A+AVAEEE P E +EI  LKKALVDSFYGTDRGL A
Sbjct: 61  VLTRA-ADDDEWGPEKEK--EGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNA 120

Query: 121 SSETRAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVE 180
           +SETRAEIVELITQLEAKNPTPAPTEALTLLN KWIL YTSFSGLFPLLSR T PL +VE
Sbjct: 121 TSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVE 180

Query: 181 EISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSI 240
           EISQTIDSE+FTVQNS+QF+GPLATTSISTNAKFEVRSP+RVQIKFEEGVIGTPQ+TDS+
Sbjct: 181 EISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSL 240

Query: 241 VIPENVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYL 300
           V+PENVEFLGQKIDLSPF GI+SS+Q+TAS+VAKTISSQPP+KFSI N+  +SWLLTTYL
Sbjct: 241 VLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYL 300

Query: 301 DEDLRISRGDVGSVFVLIKEGSALLSP 321
           DEDLRISR D GSVFV IKEGS LL P
Sbjct: 301 DEDLRISRADAGSVFVFIKEGSPLLMP 323

[Close]

BLAST of Carg07863 vs. Swiss-Prot
Match: sp|P80471|LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 424.9 bits (1091), Expect = 8.1e-118
Identity = 231/327 (70.64%), Postives = 256/327 (78.29%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGA-----RVAAGKSAISARPAF 60
           MA +S  NQ+PCKTL +     +P SK S  PISS    +     R  + K   + +P F
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKF 60

Query: 61  KIRAVGND--DEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRA 120
             +A   D  DEWG E VE    G    V EE P E SEI  LKK L DS YGT+RGL A
Sbjct: 61  TAQATNYDKEDEWGPE-VEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSA 120

Query: 121 SSETRAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVE 180
           SSETRAEIVELITQLE+KNP PAPTEALTLLNGKWILAYTSFSGLFPLLSR   PLV+VE
Sbjct: 121 SSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVE 180

Query: 181 EISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSI 240
           EISQTIDSESFTVQNSV F+GPLATTSISTNAKFEVRSP+RVQIKFEEG+IGTPQLTDSI
Sbjct: 181 EISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSI 240

Query: 241 VIPENVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYL 300
           V+PENVEFLGQKIDLSPF G+I+S+Q+TAS+VAK+ISSQPPIKF I N   +SWLLTTYL
Sbjct: 241 VLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYL 300

Query: 301 DEDLRISRGDVGSVFVLIKEGSALLSP 321
           D++LRISRGD GSVFVLIKEGS LL P
Sbjct: 301 DDELRISRGDAGSVFVLIKEGSPLLKP 326

[Close]

BLAST of Carg07863 vs. Swiss-Prot
Match: sp|O99019|LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum OX=50514 PE=1 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 3.4e-116
Identity = 228/327 (69.72%), Postives = 254/327 (77.68%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGA-----RVAAGKSAISARPAF 60
           MA +S  NQ+PCKTL +     +P SK S  PISS    +     R  + K   + +P F
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKF 60

Query: 61  KIRAVGND--DEWGEEKVEPYDDGSAVAVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRA 120
             +A   D  DEWG E VE    G    V EE P E SEI  LKK L DS YGT+RGL A
Sbjct: 61  TAQATNYDKEDEWGPE-VEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSA 120

Query: 121 SSETRAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVE 180
           SSETRAEIVELITQLE+KNP PAPTEALTLLNGKWILAYTSFSGLFPLLSR   PLV+VE
Sbjct: 121 SSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVE 180

Query: 181 EISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSI 240
           EISQTIDSESFTVQNSV F+GPLATTSISTNAKFEVRSP+RVQIKFEEG+IGTPQLTDSI
Sbjct: 181 EISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSI 240

Query: 241 VIPENVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYL 300
           V+PENVEFLGQKID+SPF G+I+S+Q+TAS+V K+ISSQPPIKF I N   +SWLLTTYL
Sbjct: 241 VLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYL 300

Query: 301 DEDLRISRGDVGSVFVLIKEGSALLSP 321
           D++LRI RGD GSVFVLIKEGS LL P
Sbjct: 301 DDELRIPRGDAGSVFVLIKEGSPLLKP 326

[Close]

BLAST of Carg07863 vs. Swiss-Prot
Match: sp|Q94KU6|PAP2_BRACM (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris OX=3711 GN=PAP2 PE=1 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 9.0e-109
Identity = 215/324 (66.36%), Postives = 261/324 (80.56%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKP--SIFPISSIGVGARVAAGKSAISARPAFKIR 60
           MA V  FNQ PCKT   +    +P+SKP  S+ P+S++        G+ A+S R  F++R
Sbjct: 1   MATVQFFNQFPCKTRVQSSANSKPLSKPPSSLVPMSALTRRPSFPPGEFAVS-RSDFRVR 60

Query: 61  AVGNDDEWGEEKVEPYDDGSAVAVAEE--EPLEQSEIYKLKKALVDSFYGTDRGLRASSE 120
            +  +DE   E  E    GSA+ +AEE  E +E++E+  LK++LVDS YGTDRGL ASSE
Sbjct: 61  VIDAEDELDPETSE--GGGSALLMAEEAIESVEETEV--LKRSLVDSLYGTDRGLSASSE 120

Query: 121 TRAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEIS 180
           TRAEI +LITQLE+KNPTPAPT+AL LLNGKWILAYTSF GLFPLLSR   PLVKV+EIS
Sbjct: 121 TRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIVPLVKVDEIS 180

Query: 181 QTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIP 240
           QTIDS++FTV+NSV F+GPLATTSISTNAKFE+RSP+RVQIKFEEGVIGTPQLTDSI IP
Sbjct: 181 QTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTDSIEIP 240

Query: 241 ENVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDED 300
           E VEFLGQKIDL+P  G+++S+Q+TA++VA+TISSQPP+KFS+P    +SWLLTTYLD+D
Sbjct: 241 EYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKD 300

Query: 301 LRISRGDVGSVFVLIKEGSALLSP 321
           +RISRGD GSVFVLIKEGS LL+P
Sbjct: 301 IRISRGDGGSVFVLIKEGSPLLNP 319

[Close]

BLAST of Carg07863 vs. TrEMBL
Match: tr|A0A1S3B0U1|A0A1S3B0U1_CUCME (chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis melo OX=3656 GN=LOC103484642 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.2e-147
Identity = 278/323 (86.07%), Postives = 294/323 (91.02%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAISARPAFKIRAV 60
           MAFVSQFNQLPCKTL+LNPPQPQ  SKPSIFPI+SIG GAR AAGKS IS RP+FK+RAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSIFPIASIGAGARAAAGKSLISVRPSFKVRAV 60

Query: 61  GNDDEWGEEKVEPYDDGSAV---AVAEEEPLEQSEIYKLKKALVDSFYGTDRGLRASSET 120
            NDDEWGEEK E Y DGSAV        +P+E SEIYKLKKALVDSFYGTDRGLR S +T
Sbjct: 61  LNDDEWGEEKEEKYGDGSAVXXXXXXXXKPMEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQ 180
           RAEIVELITQLE+KNPTPAPTEALTLLNGKWIL YTSFSGLFPLLSR+T PLVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILQYTSFSGLFPLLSRNTLPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPE 240
           TIDSE+ TVQNSVQFSGPLATTSI+TNAKFEVRSP RV IKFEEGVIGTPQLTDSIVIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDL 300
           NV+FLGQKIDLSPFNGIISSIQ+TASNVAKTISSQPP+KFSI NTK ESWLLTTYLDEDL
Sbjct: 241 NVDFLGQKIDLSPFNGIISSIQDTASNVAKTISSQPPLKFSISNTKVESWLLTTYLDEDL 300

Query: 301 RISRGDVGSVFVLIKEGSALLSP 321
           RISRGD GSVFVL+KEGSALLSP
Sbjct: 301 RISRGDGGSVFVLLKEGSALLSP 323

[Close]

BLAST of Carg07863 vs. TrEMBL
Match: tr|A0A0A0KL49|A0A0A0KL49_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G512870 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.1e-143
Identity = 272/322 (84.47%), Postives = 294/322 (91.30%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAISARPAFKIRAV 60
           MAFVSQFNQLPCKTL+LNPPQPQ  SKPS+FPI+SIG  AR AAGKS IS RPAFK+RAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISVRPAFKVRAV 60

Query: 61  GNDDEWGEEKVEPYDDGSAVAVA---EEEPLEQSEIYKLKKALVDSFYGTDRGLRASSET 120
            NDDEWGE+K E Y D S+VAVA   EE+PLE SEIYKLKKALVDSFYGTDRGLR S +T
Sbjct: 61  LNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQ 180
           RAEIVELITQLE+KNPTPAPTEALTLLNGKWILAYT+F+GLFPLLSR+  PLVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPE 240
           TIDSE+ TVQNSVQFSGPLATTSI+TNAKFEVRSP RV IKFEEGVIGTPQLTDSIVIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDL 300
           NV+FLGQKID +PFNGIISS+Q+TASNVAKTISSQPPIKFSI NT+ ESWLLTTYLDEDL
Sbjct: 241 NVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDL 300

Query: 301 RISRGDVGSVFVLIKEGSALLS 320
           RISRGD GSVFVL+KEGS+ LS
Sbjct: 301 RISRGDGGSVFVLLKEGSSFLS 321

[Close]

BLAST of Carg07863 vs. TrEMBL
Match: tr|V4TR92|V4TR92_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10015934mg PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 9.6e-124
Identity = 246/327 (75.23%), Postives = 274/327 (83.79%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAIS------ARPA 60
           MA +SQ NQ PCKTLS NPP  Q  SKPSI P++S+ + +R  A KS +S      ARP 
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRI-SRSLAKKSFLSIQGFTRARPL 60

Query: 61  FKIRAVGNDDEWGEEKVEPYDDGSAVAVAEEE-PLEQSEIYKLKKALVDSFYGTDRGLRA 120
              RA  +DDEWG EK +  + G A+AVAEEE P E +EI  LKKALVDSFYGTDRGL A
Sbjct: 61  VLTRA-ADDDEWGPEKEK--EGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNA 120

Query: 121 SSETRAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVE 180
           +SETRAEIVELITQLEAKNPTPAPTEALTLLN KWIL YTSFSGLFPLLSR T PL +VE
Sbjct: 121 TSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVE 180

Query: 181 EISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSI 240
           EISQTIDSE+FTVQNS+QF+GPLATTSISTNAKFEVRSP+RVQIKFEEGVIGTPQ+TDS+
Sbjct: 181 EISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSL 240

Query: 241 VIPENVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYL 300
           V+PENVEFLGQKIDLSPF GI+SS+Q+TAS+VAKTISSQPP+KFSI N+  +SWLLTTYL
Sbjct: 241 VLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYL 300

Query: 301 DEDLRISRGDVGSVFVLIKEGSALLSP 321
           DEDLRISR D GSVFV IKEGS LL P
Sbjct: 301 DEDLRISRADAGSVFVFIKEGSPLLMP 323

[Close]

BLAST of Carg07863 vs. TrEMBL
Match: tr|A0A2H5N5E2|A0A2H5N5E2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_015400 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 9.6e-124
Identity = 246/327 (75.23%), Postives = 274/327 (83.79%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAIS------ARPA 60
           MA +SQ NQ PCKTLS NPP  Q  SKPSI P++S+ + +R  A KS +S      ARP 
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRI-SRSLAKKSFLSIQGFTRARPL 60

Query: 61  FKIRAVGNDDEWGEEKVEPYDDGSAVAVAEEE-PLEQSEIYKLKKALVDSFYGTDRGLRA 120
              RA  +DDEWG EK +  + G A+AVAEEE P E +EI  LKKALVDSFYGTDRGL A
Sbjct: 61  VLTRA-ADDDEWGPEKEK--EGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNA 120

Query: 121 SSETRAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVE 180
           +SETRAEIVELITQLEAKNPTPAPTEALTLLN KWIL YTSFSGLFPLLSR T PL +VE
Sbjct: 121 TSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVE 180

Query: 181 EISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSI 240
           EISQTIDSE+FTVQNS+QF+GPLATTSISTNAKFEVRSP+RVQIKFEEGVIGTPQ+TDS+
Sbjct: 181 EISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSL 240

Query: 241 VIPENVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYL 300
           V+PENVEFLGQKIDLSPF GI+SS+Q+TAS+VAKTISSQPP+KFSI N+  +SWLLTTYL
Sbjct: 241 VLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYL 300

Query: 301 DEDLRISRGDVGSVFVLIKEGSALLSP 321
           DEDLRISR D GSVFV IKEGS LL P
Sbjct: 301 DEDLRISRADAGSVFVFIKEGSPLLMP 323

[Close]

BLAST of Carg07863 vs. TrEMBL
Match: tr|A0A067GF90|A0A067GF90_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g020639mg PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 9.6e-124
Identity = 245/327 (74.92%), Postives = 275/327 (84.10%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAIS------ARPA 60
           MA +SQ NQ PCKTLS NPP  Q  SKPSI P++S+ + +R  A KS +S      ARP 
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRI-SRSLAKKSFLSIQGFTRARPL 60

Query: 61  FKIRAVGNDDEWGEEKVEPYDDGSAVAVAEEE-PLEQSEIYKLKKALVDSFYGTDRGLRA 120
              RA  +DDEWG EK +  ++G A+AVAEEE P E +EI  LKKALVDSFYGTDRGL A
Sbjct: 61  VLTRA-ADDDEWGPEKEK--EEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNA 120

Query: 121 SSETRAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVE 180
           +SETRAEIVELITQLEAKNPTPAPTEALTLLN KWIL YTSFSGLFPLLSR T PL +VE
Sbjct: 121 TSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVE 180

Query: 181 EISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSI 240
           EISQTIDSE+FTVQNS++F+GPLATTSISTNAKFEVRSP+RVQIKFEEG+IGTPQ+TDS+
Sbjct: 181 EISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSL 240

Query: 241 VIPENVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYL 300
           VIPENVEFLGQKIDLSPF GI+SS+Q+TAS+VAKTISSQPP+KFSI N+  +SWLLTTYL
Sbjct: 241 VIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYL 300

Query: 301 DEDLRISRGDVGSVFVLIKEGSALLSP 321
           DEDLRISR D GSVFV IKEGS LL P
Sbjct: 301 DEDLRISRADAGSVFVFIKEGSPLLMP 323

The following BLAST results are available for this feature:

BLAST of Carg07863 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926829.1	2.9e-172	99.69	chromoplast-specific carotenoid-associated protein, chromoplastic-like [Cucurbit...	[more]
XP_023003471.1	4.2e-171	99.06	chromoplast-specific carotenoid-associated protein, chromoplastic-like [Cucurbit...	[more]
XP_023518403.1	2.5e-168	97.50	chromoplast-specific carotenoid-associated protein, chromoplastic-like [Cucurbit...	[more]
XP_022132925.1	5.9e-149	87.80	chromoplast-specific carotenoid-associated protein, chromoplastic [Momordica cha...	[more]
XP_008440050.1	1.9e-147	86.07	PREDICTED: chromoplast-specific carotenoid-associated protein, chromoplastic [Cu...	[more]

BLAST of Carg07863 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G04020.1	2.5e-109	65.22	fibrillin	[more]
AT4G22240.1	8.3e-105	63.86	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT2G35490.1	3.9e-62	47.47	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT5G09820.2	1.5e-08	25.91	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT1G51110.1	3.0e-06	25.11	Plastid-lipid associated protein PAP / fibrillin family protein	[more]

BLAST of Carg07863 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q96398\|CHRC_CUCSA	5.4e-146	84.47	Chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis sat...	[more]
sp\|Q9ZWQ8\|PAP_CITUN	4.8e-126	75.23	Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu OX=55188 GN=PAP...	[more]
sp\|P80471\|LIPC_SOLTU	8.1e-118	70.64	Light-induced protein, chloroplastic OS=Solanum tuberosum OX=4113 PE=1 SV=2	[more]
sp\|O99019\|LIPC_SOLDE	3.4e-116	69.72	Light-induced protein, chloroplastic OS=Solanum demissum OX=50514 PE=1 SV=1	[more]
sp\|Q94KU6\|PAP2_BRACM	9.0e-109	66.36	Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris OX=3711...	[more]

BLAST of Carg07863 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B0U1\|A0A1S3B0U1_CUCME	1.2e-147	86.07	chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis mel...	[more]
tr\|A0A0A0KL49\|A0A0A0KL49_CUCSA	1.1e-143	84.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G512870 PE=4 SV=1	[more]
tr\|V4TR92\|V4TR92_9ROSI	9.6e-124	75.23	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10015934mg PE=4 ...	[more]
tr\|A0A2H5N5E2\|A0A2H5N5E2_CITUN	9.6e-124	75.23	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_015400 PE=4 SV=1	[more]
tr\|A0A067GF90\|A0A067GF90_CITSI	9.6e-124	74.92	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g020639mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006843	PAP/fibrillin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07863-RA	Carg07863-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006843	Plastid lipid-associated protein/fibrillin conserved domain	PFAM	PF04755	PAP_fibrillin	coord: 95..310 e-value: 1.2E-80 score: 270.0
None	No IPR available	PANTHER	PTHR31906:SF7	PLASTID-LIPID-ASSOCIATED PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 1..318
None	No IPR available	PANTHER	PTHR31906	FAMILY NOT NAMED	coord: 1..318

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07863	Cla014416	Watermelon (97103) v1	carwmB0642
Carg07863	Csa6G512870	Cucumber (Chinese Long) v2	carcuB0663
Carg07863	MELO3C007423	Melon (DHL92) v3.5.1	carmeB0642
Carg07863	ClCG01G021610	Watermelon (Charleston Gray)	carwcgB0623
Carg07863	CSPI06G33190	Wild cucumber (PI 183967)	carcpiB0672
Carg07863	Cucsa.044900	Cucumber (Gy14) v1	carcgyB0714
Carg07863	CmaCh07G003350	Cucurbita maxima (Rimu)	carcmaB0914
Carg07863	CmaCh03G005600	Cucurbita maxima (Rimu)	carcmaB0912
Carg07863	CmoCh07G003240	Cucurbita moschata (Rifu)	carcmoB0888
Carg07863	CmoCh03G005860	Cucurbita moschata (Rifu)	carcmoB0886
Carg07863	Lsi01G004630	Bottle gourd (USVL1VR-Ls)	carlsiB585
Carg07863	Cp4.1LG10g09800	Cucurbita pepo (Zucchini)	carcpeB0913
Carg07863	Cp4.1LG19g08110	Cucurbita pepo (Zucchini)	carcpeB0915
Carg07863	CsGy6G032770	Cucumber (Gy14) v2	carcgybB0640
Carg07863	MELO3C007423.2	Melon (DHL92) v3.6.1	carmedB0652
Carg07863	CsaV3_6G048650	Cucumber (Chinese Long) v3	carcucB0674
Carg07863	Cla97C01G021210	Watermelon (97103) v2	carwmbB0669
Carg07863	Bhi03G000480	Wax gourd	carwgoB0759

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07863	Carg13669	Silver-seed gourd	carcarB563

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07863	Cucurbita maxima (Rimu)	carcmaB0907