CmoCh03G000560 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G000560
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	winged-helix DNA-binding transcription factor family protein
Location	Cmo_Chr03 : 917233 .. 919195 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTCTTCATTTTTTCATTTTTTAAAAAAAAACCCATTAATTCTCTTCTCCTAAAGTCCATAAAAATCCAATCTTTCATTCATTTCTTCATCTCTTTGCGTTGAATTTTGGTGTTTTGAGTGTTCATGGAGGCCGGAGTGAGCAATAATAACGGTGATCAGAAGGGGTTGCGGTTGCCGTCGCCGCCGCGGACGGTGGAGAGTATGATGAAAAAGTCAACGCCGCCGCCGTTTCTGGTGAAGACTTATACGGTGGTGGAGGATCCGGCGACCGACAAGGTGATATCGTGGAACAGCGAGGGGACGGCGTTTGTGGTTTGGCAGACGGCGGAGTTCGCAAAGGATGTTTTGCCGAAGCTCTTTAAACACTGCAATTTCTCAAGCTTTGTTCGCCAGCTTAATACTTACGTACGTATTCTTTTTATTTTATTTTCTTTATCTTTTTTATTTTAAACCCTATTAAATTTTTTTTTTCCTTTAATTTTCGGGTTGAATTACAAACACGTGAGCGGAAATTTGAATAGACAAAACCCGAACGACAACAAAGGAAGAACGATCATCTTAGATTAAGAAAAATTGTAGAAAATATTTTCTCGAGAAGTTTAATTTCTGATCCTTTTAATCGTGTTTAATGATTAATGAGTTAAAACATTAAAAGCTTCTAATAAATTTATAAATTTTAAATAAAATTTTGTTCGAGCAATTTTTAAGGTTGTCATAGAACAGATATCCTAACTACTTAACTATGTTATTATTAAAAATCCCGAGTGGTTATAATTTTATAAATTTATTTAAATTTTGATACTTTAAAAAATAATAAAATTGAATAAATAATATTTTCTTTTAAATATTAAGAAAGAAAACAAAAATAATGCAAAAACTCAAGTCAACCAAAAAAAAATTTAATTTTCCATTTTTATTAAATACTTTACAAACCTAAACCCATTTTCCAAAATTTTATTTTATTTTATTTTTATTTTTTACCAACCCATTATTATTTTTTAAATAAAAAAGTAGGGTCCTTACCTGCCACGTGTCATTTAATTGCAAATGATTGACTTGGTCAAAGCCAATATGAATTAATTATTCTTATATGTAACTTTAATTATATTTATTTATTTATTGTAAAATTACCATCAATAATATGAACTTAACCCATCTTAGAAGAAAAGATTAAGGATAAAATCGTAAATTTAGGGTTTAAGGTTTATAAGTCGATGATAAGCTGATCGATCCTTCTCTCAAAGTTTAAATTTTTATTGAAGGGGTTTCGAAAGGTGACGACAACAAGGTGGGAGTTTTGCAACGACAAATTTCGAAAGGGTGAAAAGGAAAAGCTTTGTGAAATACGAAGACGAAAGGCATGGACGAACAAGCAACAACACGAGGTACAACACGAGGTCGATGAAGATCAGAGATCTTCGTCTTCAAACTCATCGTCGTCACAATACAATACGCTAATGGATGAGAACAAGAGGTTGAAGAAGGAAAATGGGGCCTTAAGCTCAGAGCTTGCAAGCATGAAAGGGAAGTGCAGAGAGCTTCTTGATTTGGTGGCTAAGTATGGGAATGGTTCAAGGAAAGAAGATGAAGATGAGAGGCCAAAGCTGTTTGGTGTGAGGTTGGAAGTTGAAGGAGAGAGGAGGAGGAAGACAAAAAGGGCTGAAGAGACAGCTTTTTTGCCTTCTCAATCATGCAAATAGAATTATTAAGCTATTTATGAAGAACATAGAAGCATAATGTGTAAAAAAAAGATGAATTTATAGAAGATTAATAAGGGCTGAGTCGCTAACGTGTAAAAAGATGGGCACAAGCTCGATCTTTCGATCCATATGATCGATGTAAGTTGACATTATTTCTAAAACGGTTGGTTTGATCTCGTGATTGTAATAGCCAAGTAGATATTGTTCTTTTCGGGCTTTCTCTTTCGGGGTTCCCTTTAGGGTCTTTAAAACGTGAATGC

mRNA sequence

AAATTCTTCATTTTTTCATTTTTTAAAAAAAAACCCATTAATTCTCTTCTCCTAAAGTCCATAAAAATCCAATCTTTCATTCATTTCTTCATCTCTTTGCGTTGAATTTTGGTGTTTTGAGTGTTCATGGAGGCCGGAGTGAGCAATAATAACGGTGATCAGAAGGGGTTGCGGTTGCCGTCGCCGCCGCGGACGGTGGAGAGTATGATGAAAAAGTCAACGCCGCCGCCGTTTCTGGTGAAGACTTATACGGTGGTGGAGGATCCGGCGACCGACAAGGTGATATCGTGGAACAGCGAGGGGACGGCGTTTGTGGTTTGGCAGACGGCGGAGTTCGCAAAGGATGTTTTGCCGAAGCTCTTTAAACACTGCAATTTCTCAAGCTTTGTTCGCCAGCTTAATACTTACGGGTTTCGAAAGGTGACGACAACAAGGTGGGAGTTTTGCAACGACAAATTTCGAAAGGGTGAAAAGGAAAAGCTTTGTGAAATACGAAGACGAAAGGCATGGACGAACAAGCAACAACACGAGGTACAACACGAGGTCGATGAAGATCAGAGATCTTCGTCTTCAAACTCATCGTCGTCACAATACAATACGCTAATGGATGAGAACAAGAGGTTGAAGAAGGAAAATGGGGCCTTAAGCTCAGAGCTTGCAAGCATGAAAGGGAAGTGCAGAGAGCTTCTTGATTTGGTGGCTAAGTATGGGAATGGTTCAAGGAAAGAAGATGAAGATGAGAGGCCAAAGCTGTTTGGTGTGAGGTTGGAAGTTGAAGGAGAGAGGAGGAGGAAGACAAAAAGGGCTGAAGAGACAGCTTTTTTGCCTTCTCAATCATGCAAATAGAATTATTAAGCTATTTATGAAGAACATAGAAGCATAATGTGTAAAAAAAAGATGAATTTATAGAAGATTAATAAGGGCTGAGTCGCTAACGTGTAAAAAGATGGGCACAAGCTCGATCTTTCGATCCATATGATCGATGTAAGTTGACATTATTTCTAAAACGGTTGGTTTGATCTCGTGATTGTAATAGCCAAGTAGATATTGTTCTTTTCGGGCTTTCTCTTTCGGGGTTCCCTTTAGGGTCTTTAAAACGTGAATGC

Coding sequence (CDS)

ATGGAGGCCGGAGTGAGCAATAATAACGGTGATCAGAAGGGGTTGCGGTTGCCGTCGCCGCCGCGGACGGTGGAGAGTATGATGAAAAAGTCAACGCCGCCGCCGTTTCTGGTGAAGACTTATACGGTGGTGGAGGATCCGGCGACCGACAAGGTGATATCGTGGAACAGCGAGGGGACGGCGTTTGTGGTTTGGCAGACGGCGGAGTTCGCAAAGGATGTTTTGCCGAAGCTCTTTAAACACTGCAATTTCTCAAGCTTTGTTCGCCAGCTTAATACTTACGGGTTTCGAAAGGTGACGACAACAAGGTGGGAGTTTTGCAACGACAAATTTCGAAAGGGTGAAAAGGAAAAGCTTTGTGAAATACGAAGACGAAAGGCATGGACGAACAAGCAACAACACGAGGTACAACACGAGGTCGATGAAGATCAGAGATCTTCGTCTTCAAACTCATCGTCGTCACAATACAATACGCTAATGGATGAGAACAAGAGGTTGAAGAAGGAAAATGGGGCCTTAAGCTCAGAGCTTGCAAGCATGAAAGGGAAGTGCAGAGAGCTTCTTGATTTGGTGGCTAAGTATGGGAATGGTTCAAGGAAAGAAGATGAAGATGAGAGGCCAAAGCTGTTTGGTGTGAGGTTGGAAGTTGAAGGAGAGAGGAGGAGGAAGACAAAAAGGGCTGAAGAGACAGCTTTTTTGCCTTCTCAATCATGCAAATAG

Homology

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BLAST of CmoCh03G000560 vs. Swiss-Prot
Match: HSFB3_ARATH (Heat stress transcription factor B-3 OS=Arabidopsis thaliana GN=HSFB3 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-51
Identity = 125/235 (53.19%), Postives = 153/235 (65.11%), Query Frame = 1


Query: 6   SNNNGDQKGLRLPSPPRTVESMMKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVW 65
           ++N  D++ L L        S  +   PPPFLVKTY VVEDP TD VISWN  GT FVVW
Sbjct: 11  NDNVNDEERLPLEFMIGNSTSTAELQPPPPFLVKTYKVVEDPTTDGVISWNEYGTGFVVW 70

Query: 66  QTAEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRR 125
           Q AEFA+D+LP LFKHCNFSSFVRQLNTYGFRKVTT RWEF N+ FRKG++E +  IRRR
Sbjct: 71  QPAEFARDLLPTLFKHCNFSSFVRQLNTYGFRKVTTIRWEFSNEMFRKGQRELMSNIRRR 130

Query: 126 KA--WT-NKQQHEV----------QHE---VD---EDQRSSSSNSSSSQYNTLMDENKRL 185
           K+  W+ NK  H+V           H+   +D   EDQ+SS++ SSS  Y  L+DENK L
Sbjct: 131 KSQHWSHNKSNHQVVPTTTMVNQEGHQRIGIDHHHEDQQSSAT-SSSFVYTALLDENKCL 190

Query: 186 KKENGALSSELASMKGKCRELLDLVAKY------GNGSRKEDEDERPKLFGVRLE 216
           K EN  LS EL   K KC++L++LV +Y            ++EDE  KLFGV+LE
Sbjct: 191 KNENELLSCELGKTKKKCKQLMELVERYRGEDEDATDESDDEEDEGLKLFGVKLE 244

[Close]

BLAST of CmoCh03G000560 vs. Swiss-Prot
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 8.6e-40
Identity = 94/190 (49.47%), Postives = 119/190 (62.63%), Query Frame = 1


Query: 27  MMKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSS 86
           M +++ P PFL+KTY +V+D ATD VISWN  GT FVVW+TAEFAKD+LPK FKH NFSS
Sbjct: 1   MSQRTAPAPFLLKTYQLVDDAATDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKHNNFSS 60

Query: 87  FVRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKAWTNKQQ--------HEVQH 146
           FVRQLNTYGFRK+   +WEF N+ F++G+KE L  IRRRK  T+                
Sbjct: 61  FVRQLNTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRKTVTSTPAGGKSVAAGASASP 120

Query: 147 EVDEDQRSSSSNSSS--------------SQYNTLMDENKRLKKENGALSSELASMKGKC 195
           +   D   SSS SS               SQ+  L DEN++LKK+N  LSSEL   K +C
Sbjct: 121 DNSGDDIGSSSTSSPDSKNPGSVDTPGKLSQFTDLSDENEKLKKDNQMLSSELVQAKKQC 180

[Close]

BLAST of CmoCh03G000560 vs. Swiss-Prot
Match: HSFB1_ARATH (Heat stress transcription factor B-1 OS=Arabidopsis thaliana GN=HSFB1 PE=2 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 2.8e-35
Identity = 104/253 (41.11%), Postives = 138/253 (54.55%), Query Frame = 1


Query: 23  TVESMMKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHC 82
           T  +  ++S P PFL KTY +V+D +TD V+SWN EGTAFVVW+TAEFAKD+LP+ FKH 
Sbjct: 2   TAVTAAQRSVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHN 61

Query: 83  NFSSFVRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKAWTNK---------QQ 142
           NFSSF+RQLNTYGFRK    +WEF ND FR+G ++ L +IRRRK+               
Sbjct: 62  NFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRKSVIASTAGKCVVVGSP 121

Query: 143 HEVQHEVDEDQRSSSSNSSSSQYN---------TLMDENKRLKKENGALSSELASMKGKC 202
            E      +D  SSS++S  S  N          L  EN++LK+EN  LSSELA+ K + 
Sbjct: 122 SESNSGGGDDHGSSSTSSPGSSKNPGSVENMVADLSGENEKLKRENNNLSSELAAAKKQR 181

Query: 203 REL--------------LDLVAKYGNGSRKEDEDERP------------------KLFGV 226
            EL              +D + K G     E ++E                    KLFGV
Sbjct: 182 DELVTFLTGHLKVRPEQIDKMIKGGKFKPVESDEESECEGCDGGGGAEEGVGEGLKLFGV 241

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BLAST of CmoCh03G000560 vs. Swiss-Prot
Match: HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica GN=HSFB2C PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.3e-35
Identity = 68/98 (69.39%), Postives = 79/98 (80.61%), Query Frame = 1


Query: 29  KKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSSFV 88
           ++S P PFL KTY +VEDPA D VISWN +G+ FVVW+ AEFA+D+LPK FKH NFSSFV
Sbjct: 32  QRSLPTPFLTKTYQLVEDPAVDDVISWNEDGSTFVVWRPAEFARDLLPKYFKHNNFSSFV 91

Query: 89  RQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRK 127
           RQLNTYGFRK+   RWEF ND FR+GEK  LC+I RRK
Sbjct: 92  RQLNTYGFRKIVPDRWEFANDCFRRGEKRLLCDIHRRK 129

[Close]

BLAST of CmoCh03G000560 vs. Swiss-Prot
Match: HFB2A_ORYSJ (Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica GN=HSFB2A PE=2 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34
Identity = 97/224 (43.30%), Postives = 123/224 (54.91%), Query Frame = 1


Query: 34  PPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNT 93
           PPFL KTY +VEDP+TD+ ISWN  GTAFVVW+ AEFA+D+LPK FKH NFSSFVRQLNT
Sbjct: 9   PPFLTKTYAMVEDPSTDETISWNDSGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNT 68

Query: 94  YGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKAW-----------------------TN 153
           YGF+KV   RWEF ND FR+GEK  L  I+RRK                         T+
Sbjct: 69  YGFKKVVADRWEFANDCFRRGEKHLLGGIQRRKGSGTGGAGAAPAGGIPTAIPISSPPTS 128

Query: 154 KQQHEVQHEVDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELASMKGKCRELLDL 213
                          +  +   S     L +EN RL++EN  L+ ELA  +  C  +  L
Sbjct: 129 SGGEPAVSSSPPRGAAGIAAGVSGAVAELEEENARLRRENARLARELARARRVCDGVRRL 188

Query: 214 VAKY----GNGSRKEDE-DERPKLFGVRLEVEGERRRKTKRAEE 230
           V++Y    G G  +  E D +P LFGV   + G+R R+    +E
Sbjct: 189 VSRYDHDHGGGEEEAGEGDVKPMLFGV--AIGGKRSREENGEDE 230

[Close]

BLAST of CmoCh03G000560 vs. TrEMBL
Match: A0A0U3SRJ2_VITPS (Transcription factor HsfB3a OS=Vitis pseudoreticulata PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76
Identity = 158/226 (69.91%), Postives = 184/226 (81.42%), Query Frame = 1


Query: 28  MKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSSF 87
           ++KSTPPPFL+KTY +VEDPATD VISWNS+GTAFVVWQ AEFA+D+LP LFKH NFSSF
Sbjct: 15  VRKSTPPPFLLKTYMLVEDPATDGVISWNSDGTAFVVWQPAEFARDLLPTLFKHSNFSSF 74

Query: 88  VRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKAWTNKQQHEVQ---------- 147
           VRQLNTYGFRKV T+RWEFCND FR+GE+E LCEIRRRKAWT +QQ + Q          
Sbjct: 75  VRQLNTYGFRKVATSRWEFCNDMFRRGERELLCEIRRRKAWTKQQQQQQQAVGGPADQNG 134

Query: 148 -HEVDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELASMKGKCRELLDLVAKYGN 207
             E++ED RSSS+ SSSS Y++L+DENKRLKKENG L SEL SMK KC+ELLDLVA +  
Sbjct: 135 VQELEEDLRSSST-SSSSGYSSLVDENKRLKKENGVLCSELTSMKNKCKELLDLVAMHAG 194

Query: 208 GSRKEDEDERPKLFGVRLEVEGERRRKTKRAE--ETA-FLPSQSCK 240
             ++E++DERPKLFGVRLEV+G+R RK KRAE  ETA  L SQSCK
Sbjct: 195 AEKEEEDDERPKLFGVRLEVQGDRERKRKRAEISETASILLSQSCK 239

[Close]

BLAST of CmoCh03G000560 vs. TrEMBL
Match: B9II85_POPTR (Heat Stress Transcription Factor family protein OS=Populus trichocarpa GN=POPTR_0016s05680g PE=3 SV=2)

HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76
Identity = 157/219 (71.69%), Postives = 179/219 (81.74%), Query Frame = 1


Query: 28  MKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSSF 87
           ++KSTPPPFL+KTY +VEDPATD+VISWN EGT FVVWQ AEFA+D+LP LFKH NFSSF
Sbjct: 11  VRKSTPPPFLLKTYMLVEDPATDEVISWNEEGTGFVVWQPAEFARDLLPTLFKHSNFSSF 70

Query: 88  VRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKAWTNKQQ-----HEVQHEVDE 147
           VRQLNTYGFRKV T+RWEFCND FRKGE+E LC+IRRRKAW++KQQ          E +E
Sbjct: 71  VRQLNTYGFRKVATSRWEFCNDMFRKGERELLCQIRRRKAWSSKQQPIAPIQVTTQEFEE 130

Query: 148 DQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELASMKGKCRELLDLVAKYGNGSRKED 207
           DQRSSS+ SSSS+Y TL+DENKRLKKENG LS+EL SM  KC+ELLDLVAKY +   KE+
Sbjct: 131 DQRSSST-SSSSEYTTLVDENKRLKKENGVLSTELTSMNRKCKELLDLVAKYAH-LEKEE 190

Query: 208 EDERPKLFGVRLEVEGERRRKTKRA---EETAFLPSQSC 239
           EDERPKLFGVRLE EG+R RK KRA   E  + L SQSC
Sbjct: 191 EDERPKLFGVRLEAEGDRERKRKRAEISESASILLSQSC 227

[Close]

BLAST of CmoCh03G000560 vs. TrEMBL
Match: F6HKV6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08750 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.8e-76
Identity = 158/229 (69.00%), Postives = 185/229 (80.79%), Query Frame = 1


Query: 28  MKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSSF 87
           ++KSTPPPFL+KTY +VEDPATD VISWNS+GTAFVVWQ AEFA+D+LP LFKH NFSSF
Sbjct: 14  VRKSTPPPFLLKTYMLVEDPATDGVISWNSDGTAFVVWQPAEFARDLLPTLFKHSNFSSF 73

Query: 88  VRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKAWTNKQQHEVQ---------- 147
           VRQLNTYGFRKV T+RWEFCND FR+GE+E LCEIRRRKAWT +QQ + Q          
Sbjct: 74  VRQLNTYGFRKVATSRWEFCNDMFRRGERELLCEIRRRKAWTKQQQQQQQQQQAVGGPAD 133

Query: 148 ----HEVDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELASMKGKCRELLDLVAK 207
                E+++DQRSSS+ SSSS Y++L+DENKRLKKENG L SEL SMK KC+ELLDLVA 
Sbjct: 134 QNGVQELEDDQRSSST-SSSSGYSSLVDENKRLKKENGVLCSELTSMKNKCKELLDLVAM 193

Query: 208 YGNGSRKEDEDERPKLFGVRLEVEGERRRKTKRAE--ETA-FLPSQSCK 240
           +    ++E++DERPKLFGVRLEV+G+R RK KRAE  ETA  L SQSCK
Sbjct: 194 HAGPEKEEEDDERPKLFGVRLEVQGDRERKRKRAEISETASILLSQSCK 241

[Close]

BLAST of CmoCh03G000560 vs. TrEMBL
Match: A0A151TU31_CAJCA (Heat stress transcription factor B-3 OS=Cajanus cajan GN=KK1_009724 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.3e-75
Identity = 158/236 (66.95%), Postives = 186/236 (78.81%), Query Frame = 1


Query: 8   NNGDQKGLRLPSPPRTVESMMKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQT 67
           N+ D KGL             +K TPPPFL+KTY +VEDPATD V+SWN EGTAFVVWQ 
Sbjct: 6   NDHDNKGLL---------ECARKCTPPPFLMKTYMLVEDPATDDVVSWNREGTAFVVWQP 65

Query: 68  AEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKA 127
           AEFA+D+LP LFKH NFSSFVRQLNTYGFRKV T+RWEF NDKF+KGE+E L EIRRRKA
Sbjct: 66  AEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRKA 125

Query: 128 WTNKQQ-HEVQHEVDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELASMKGKCRE 187
           WTNKQQ +    + DEDQRSSS+ SSSS Y TL+DENKRLKKENG LSSEL SMK KC+E
Sbjct: 126 WTNKQQPNAPNQDSDEDQRSSST-SSSSGYTTLVDENKRLKKENGVLSSELTSMKRKCKE 185

Query: 188 LLDLVAKYGNGSRKEDEDERPKLFGVRLEVEGER---RRKTKRAEETAFLPSQSCK 240
           LLDLVAKY + +++++EDERPKLFGVRL+V+G R   R +T+ +E  + + SQSCK
Sbjct: 186 LLDLVAKYSSHAKEKEEDERPKLFGVRLDVQGGREMKRNRTEMSESASIMLSQSCK 231

[Close]

BLAST of CmoCh03G000560 vs. TrEMBL
Match: A0A067K1D9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21103 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.7e-75
Identity = 160/244 (65.57%), Postives = 183/244 (75.00%), Query Frame = 1


Query: 6   SNNNGDQKGLRLPSPPRTVESMMKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVW 65
           +N+N + K L            ++KSTPPPFL+KTY +VEDPATD V+SWN +GT F+VW
Sbjct: 8   NNHNNNNKALEY--------QYVRKSTPPPFLLKTYMLVEDPATDHVVSWNDDGTGFIVW 67

Query: 66  QTAEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRR 125
           Q AEFA+D+LP LFKH NFSSFVRQLNTYGFRKV T+RWEFCND FRKGEKE LC+IRRR
Sbjct: 68  QPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNDMFRKGEKELLCQIRRR 127

Query: 126 KAWTNKQQHEVQ-----HEVDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELASM 185
           KAW+NKQQ   Q      E DEDQRSSS+ SSSS+Y  L+DENKRLKKEN  LSSEL  M
Sbjct: 128 KAWSNKQQPNAQIQTTPQESDEDQRSSST-SSSSEYGVLVDENKRLKKENKVLSSELTDM 187

Query: 186 KGKCRELLDLVAKYGNGSRKEDEDE--RPKLFGVRLEVEGERRRKTKRAEE---TAFLPS 240
           K KC+ELLDLVAKY    ++E+E+E   PKLFGVRLEV GER RK KRAE       L S
Sbjct: 188 KRKCKELLDLVAKYTRFEKEEEEEEDASPKLFGVRLEVAGERERKRKRAEIRECATILLS 242

[Close]

BLAST of CmoCh03G000560 vs. TAIR10
Match: AT2G41690.1 (AT2G41690.1 heat shock transcription factor B3)

HSP 1 Score: 204.5 bits (519), Expect = 7.2e-53
Identity = 125/235 (53.19%), Postives = 153/235 (65.11%), Query Frame = 1


Query: 6   SNNNGDQKGLRLPSPPRTVESMMKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVW 65
           ++N  D++ L L        S  +   PPPFLVKTY VVEDP TD VISWN  GT FVVW
Sbjct: 11  NDNVNDEERLPLEFMIGNSTSTAELQPPPPFLVKTYKVVEDPTTDGVISWNEYGTGFVVW 70

Query: 66  QTAEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRR 125
           Q AEFA+D+LP LFKHCNFSSFVRQLNTYGFRKVTT RWEF N+ FRKG++E +  IRRR
Sbjct: 71  QPAEFARDLLPTLFKHCNFSSFVRQLNTYGFRKVTTIRWEFSNEMFRKGQRELMSNIRRR 130

Query: 126 KA--WT-NKQQHEV----------QHE---VD---EDQRSSSSNSSSSQYNTLMDENKRL 185
           K+  W+ NK  H+V           H+   +D   EDQ+SS++ SSS  Y  L+DENK L
Sbjct: 131 KSQHWSHNKSNHQVVPTTTMVNQEGHQRIGIDHHHEDQQSSAT-SSSFVYTALLDENKCL 190

Query: 186 KKENGALSSELASMKGKCRELLDLVAKY------GNGSRKEDEDERPKLFGVRLE 216
           K EN  LS EL   K KC++L++LV +Y            ++EDE  KLFGV+LE
Sbjct: 191 KNENELLSCELGKTKKKCKQLMELVERYRGEDEDATDESDDEEDEGLKLFGVKLE 244

[Close]

BLAST of CmoCh03G000560 vs. TAIR10
Match: AT4G36990.1 (AT4G36990.1 heat shock factor 4)

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36
Identity = 104/253 (41.11%), Postives = 138/253 (54.55%), Query Frame = 1


Query: 23  TVESMMKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHC 82
           T  +  ++S P PFL KTY +V+D +TD V+SWN EGTAFVVW+TAEFAKD+LP+ FKH 
Sbjct: 2   TAVTAAQRSVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHN 61

Query: 83  NFSSFVRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKAWTNK---------QQ 142
           NFSSF+RQLNTYGFRK    +WEF ND FR+G ++ L +IRRRK+               
Sbjct: 62  NFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRKSVIASTAGKCVVVGSP 121

Query: 143 HEVQHEVDEDQRSSSSNSSSSQYN---------TLMDENKRLKKENGALSSELASMKGKC 202
            E      +D  SSS++S  S  N          L  EN++LK+EN  LSSELA+ K + 
Sbjct: 122 SESNSGGGDDHGSSSTSSPGSSKNPGSVENMVADLSGENEKLKRENNNLSSELAAAKKQR 181

Query: 203 REL--------------LDLVAKYGNGSRKEDEDERP------------------KLFGV 226
            EL              +D + K G     E ++E                    KLFGV
Sbjct: 182 DELVTFLTGHLKVRPEQIDKMIKGGKFKPVESDEESECEGCDGGGGAEEGVGEGLKLFGV 241

[Close]

BLAST of CmoCh03G000560 vs. TAIR10
Match: AT4G11660.1 (AT4G11660.1 winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 65/98 (66.33%), Postives = 79/98 (80.61%), Query Frame = 1


Query: 29  KKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSSFV 88
           ++S P PFL KTY +VEDP  D++ISWN +GT F+VW+ AEFA+D+LPK FKH NFSSFV
Sbjct: 53  QRSIPTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFV 112

Query: 89  RQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRK 127
           RQLNTYGFRKV   RWEF ND F++GEK  L +I+RRK
Sbjct: 113 RQLNTYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRK 150

[Close]

BLAST of CmoCh03G000560 vs. TAIR10
Match: AT1G46264.1 (AT1G46264.1 heat shock transcription factor B4)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 63/97 (64.95%), Postives = 75/97 (77.32%), Query Frame = 1


Query: 30  KSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVR 89
           K+ P PFL KTY +V+DPATD V+SW  + T FVVW+  EFA+D+LP  FKH NFSSFVR
Sbjct: 29  KAVPAPFLTKTYQLVDDPATDHVVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVR 88

Query: 90  QLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRK 127
           QLNTYGFRK+   RWEF N+ F++GEK  LCEI RRK
Sbjct: 89  QLNTYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRK 125

[Close]

BLAST of CmoCh03G000560 vs. TAIR10
Match: AT5G62020.1 (AT5G62020.1 heat shock transcription factor B2A)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31
Identity = 80/173 (46.24%), Postives = 102/173 (58.96%), Query Frame = 1


Query: 23  TVESMMKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHC 82
           T ES  ++S P PFL KT+ +VED + D VISWN +G++F+VW   +FAKD+LPK FKH 
Sbjct: 11  TGESSSQRSIPTPFLTKTFNLVEDSSIDDVISWNEDGSSFIVWNPTDFAKDLLPKHFKHN 70

Query: 83  NFSSFVRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKAWTNKQQHEVQHEVDE 142
           NFSSFVRQLNTYGF+KV   RWEF ND F++GEK  L EI+RRK  T  Q          
Sbjct: 71  NFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRRKITTTHQTVVAPSSEQR 130

Query: 143 DQR---SSSSNSSSSQYNTLMDE-------NKRLKKENGALSSELASMKGKCR 186
           +Q    S S++   +  N +M         ++     NG LS EL     K R
Sbjct: 131 NQTMVVSPSNSGEDNNNNQVMSSSPSSWYCHQTKTTGNGGLSVELLEENEKLR 183

[Close]

BLAST of CmoCh03G000560 vs. NCBI nr
Match: gi|449463360|ref|XP_004149402.1| (PREDICTED: heat stress transcription factor B-3 [Cucumis sativus])

HSP 1 Score: 338.2 bits (866), Expect = 1.2e-89
Identity = 190/247 (76.92%), Postives = 205/247 (83.00%), Query Frame = 1


Query: 1   MEAGVSNNNGDQ-KGLRLPS-PPRTVES--MMKKSTPPPFLVKTYTVVEDPATDKVISWN 60
           ME GVSNNN ++ +  +L S PPRT E+   M+KSTP PFL+KTY +VEDPATD VISWN
Sbjct: 1   MEDGVSNNNNNRNEEKKLGSWPPRTAENEIRMRKSTPAPFLMKTYRMVEDPATDDVISWN 60

Query: 61  SEGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFRKGEK 120
           S+GTAFVVWQTAEFAKDVLPKLFKH NFSSFVRQLNTYGFRKV TTRWEFCN+KF+KGEK
Sbjct: 61  SDGTAFVVWQTAEFAKDVLPKLFKHSNFSSFVRQLNTYGFRKVRTTRWEFCNEKFQKGEK 120

Query: 121 EKLCEIRRRKAWTNKQQHEVQHEVDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSE 180
           EKLCEIRRRK W NK+    QHEVDEDQRS+SSNSSSSQY TLMDENKRLKKENGALSSE
Sbjct: 121 EKLCEIRRRKKWRNKR----QHEVDEDQRSTSSNSSSSQYITLMDENKRLKKENGALSSE 180

Query: 181 LASMKGKCRELLDLVAKYGNGSRKEDEDERPKLFGVRLEVEGERRRKTKRAEE----TAF 240
           LASMK KC+ L DLVA Y N S+KEDED RPKLFGVRL  EGER RK KR EE    T  
Sbjct: 181 LASMKNKCKGLFDLVATYENISKKEDEDVRPKLFGVRL--EGERERKIKRGEEISETTTI 240

[Close]

BLAST of CmoCh03G000560 vs. NCBI nr
Match: gi|659121625|ref|XP_008460754.1| (PREDICTED: LOW QUALITY PROTEIN: heat stress transcription factor B-3 [Cucumis melo])

HSP 1 Score: 332.0 bits (850), Expect = 8.4e-88
Identity = 186/247 (75.30%), Postives = 203/247 (82.19%), Query Frame = 1


Query: 1   MEAGVS-NNNGDQKGLRLPS-PPRTVES--MMKKSTPPPFLVKTYTVVEDPATDKVISWN 60
           MEAGVS NNN   +  +L S PP   ES   M+KST  PFL+KTY +VEDP TD VISWN
Sbjct: 1   MEAGVSDNNNNRNEEKKLESWPPWKAESEIRMRKSTTAPFLMKTYRMVEDPGTDDVISWN 60

Query: 61  SEGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFRKGEK 120
           S+GTAFVVWQTAEFAKD+LPKLFKH NFSSFVRQLNTYGFRKVTTTRWEFCN+KF+KGEK
Sbjct: 61  SDGTAFVVWQTAEFAKDILPKLFKHSNFSSFVRQLNTYGFRKVTTTRWEFCNEKFQKGEK 120

Query: 121 EKLCEIRRRKAWTNKQQHEVQHEVDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSE 180
           +KLCEI+RRK W+NKQ    QH VDED+RS+SSNSSSSQYNTLMDENKRLKKENGALSSE
Sbjct: 121 KKLCEIQRRKKWSNKQ----QHGVDEDRRSTSSNSSSSQYNTLMDENKRLKKENGALSSE 180

Query: 181 LASMKGKCRELLDLVAKYGNGSRKEDEDERPKLFGVRLEVEGERRRKTKRAEE----TAF 240
           LASMK KC+EL DLVA Y N S+KEDEDER KLFGVRL  EG+R RK KR EE    T  
Sbjct: 181 LASMKNKCKELFDLVATYENISKKEDEDERXKLFGVRL--EGDRERKRKRGEEISETTTI 240

[Close]

BLAST of CmoCh03G000560 vs. NCBI nr
Match: gi|743869673|ref|XP_011033345.1| (PREDICTED: heat stress transcription factor B-3-like [Populus euphratica])

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-76
Identity = 157/219 (71.69%), Postives = 180/219 (82.19%), Query Frame = 1


Query: 28  MKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSSF 87
           ++KSTPPPFL+KTY +VEDPATD+VISWN EGT FVVWQ AEFA+D+LP LFKH NFSSF
Sbjct: 11  VRKSTPPPFLLKTYMLVEDPATDEVISWNDEGTGFVVWQPAEFARDLLPTLFKHSNFSSF 70

Query: 88  VRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKAWTNKQQ-----HEVQHEVDE 147
            RQLNTYGFRKV T+RWEFCND FRKGE+E LC+IRRRKAW++KQQ          E++E
Sbjct: 71  FRQLNTYGFRKVATSRWEFCNDMFRKGERELLCQIRRRKAWSSKQQPIAPIQVTTQELEE 130

Query: 148 DQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELASMKGKCRELLDLVAKYGNGSRKED 207
           DQRSSS+ SSSS+Y TL+DENKRLKKENG LS+EL SMK KC+ELLDLVAKY +   KE+
Sbjct: 131 DQRSSST-SSSSEYTTLVDENKRLKKENGVLSTELTSMKRKCKELLDLVAKYAH-LEKEE 190

Query: 208 EDERPKLFGVRLEVEGERRRKTKRA---EETAFLPSQSC 239
           EDERPKLFGVRLE EG+R RK KRA   E  + L SQSC
Sbjct: 191 EDERPKLFGVRLEAEGDRERKRKRAEISESASILLSQSC 227

[Close]

BLAST of CmoCh03G000560 vs. NCBI nr
Match: gi|971533959|gb|ALV82484.1| (transcription factor HsfB3a [Vitis pseudoreticulata])

HSP 1 Score: 294.3 bits (752), Expect = 1.9e-76
Identity = 158/226 (69.91%), Postives = 184/226 (81.42%), Query Frame = 1


Query: 28  MKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSSF 87
           ++KSTPPPFL+KTY +VEDPATD VISWNS+GTAFVVWQ AEFA+D+LP LFKH NFSSF
Sbjct: 15  VRKSTPPPFLLKTYMLVEDPATDGVISWNSDGTAFVVWQPAEFARDLLPTLFKHSNFSSF 74

Query: 88  VRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKAWTNKQQHEVQ---------- 147
           VRQLNTYGFRKV T+RWEFCND FR+GE+E LCEIRRRKAWT +QQ + Q          
Sbjct: 75  VRQLNTYGFRKVATSRWEFCNDMFRRGERELLCEIRRRKAWTKQQQQQQQAVGGPADQNG 134

Query: 148 -HEVDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELASMKGKCRELLDLVAKYGN 207
             E++ED RSSS+ SSSS Y++L+DENKRLKKENG L SEL SMK KC+ELLDLVA +  
Sbjct: 135 VQELEEDLRSSST-SSSSGYSSLVDENKRLKKENGVLCSELTSMKNKCKELLDLVAMHAG 194

Query: 208 GSRKEDEDERPKLFGVRLEVEGERRRKTKRAE--ETA-FLPSQSCK 240
             ++E++DERPKLFGVRLEV+G+R RK KRAE  ETA  L SQSCK
Sbjct: 195 AEKEEEDDERPKLFGVRLEVQGDRERKRKRAEISETASILLSQSCK 239

[Close]

BLAST of CmoCh03G000560 vs. NCBI nr
Match: gi|566208889|ref|XP_002323320.2| (Heat Stress Transcription Factor family protein [Populus trichocarpa])

HSP 1 Score: 294.3 bits (752), Expect = 1.9e-76
Identity = 157/219 (71.69%), Postives = 179/219 (81.74%), Query Frame = 1


Query: 28  MKKSTPPPFLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSSF 87
           ++KSTPPPFL+KTY +VEDPATD+VISWN EGT FVVWQ AEFA+D+LP LFKH NFSSF
Sbjct: 11  VRKSTPPPFLLKTYMLVEDPATDEVISWNEEGTGFVVWQPAEFARDLLPTLFKHSNFSSF 70

Query: 88  VRQLNTYGFRKVTTTRWEFCNDKFRKGEKEKLCEIRRRKAWTNKQQ-----HEVQHEVDE 147
           VRQLNTYGFRKV T+RWEFCND FRKGE+E LC+IRRRKAW++KQQ          E +E
Sbjct: 71  VRQLNTYGFRKVATSRWEFCNDMFRKGERELLCQIRRRKAWSSKQQPIAPIQVTTQEFEE 130

Query: 148 DQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELASMKGKCRELLDLVAKYGNGSRKED 207
           DQRSSS+ SSSS+Y TL+DENKRLKKENG LS+EL SM  KC+ELLDLVAKY +   KE+
Sbjct: 131 DQRSSST-SSSSEYTTLVDENKRLKKENGVLSTELTSMNRKCKELLDLVAKYAH-LEKEE 190

Query: 208 EDERPKLFGVRLEVEGERRRKTKRA---EETAFLPSQSC 239
           EDERPKLFGVRLE EG+R RK KRA   E  + L SQSC
Sbjct: 191 EDERPKLFGVRLEAEGDRERKRKRAEISESASILLSQSC 227

The following BLAST results are available for this feature:

BLAST of CmoCh03G000560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSFB3_ARATH	1.3e-51	53.19	Heat stress transcription factor B-3 OS=Arabidopsis thaliana GN=HSFB3 PE=2 SV=1	[more]
HSF24_SOLPE	8.6e-40	49.47	Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1	[more]
HSFB1_ARATH	2.8e-35	41.11	Heat stress transcription factor B-1 OS=Arabidopsis thaliana GN=HSFB1 PE=2 SV=2	[more]
HFB2C_ORYSJ	8.3e-35	69.39	Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica GN=HSFB2C ...	[more]
HFB2A_ORYSJ	1.1e-34	43.30	Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica GN=HSFB2A ...	[more]

BLAST of CmoCh03G000560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0U3SRJ2_VITPS	1.4e-76	69.91	Transcription factor HsfB3a OS=Vitis pseudoreticulata PE=2 SV=1	[more]
B9II85_POPTR	1.4e-76	71.69	Heat Stress Transcription Factor family protein OS=Populus trichocarpa GN=POPTR_...	[more]
F6HKV6_VITVI	1.8e-76	69.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08750 PE=3 SV=...	[more]
A0A151TU31_CAJCA	3.3e-75	66.95	Heat stress transcription factor B-3 OS=Cajanus cajan GN=KK1_009724 PE=3 SV=1	[more]
A0A067K1D9_JATCU	5.7e-75	65.57	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21103 PE=3 SV=1	[more]

BLAST of CmoCh03G000560 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41690.1	7.2e-53	53.19	heat shock transcription factor B3	[more]
AT4G36990.1	1.6e-36	41.11	heat shock factor 4	[more]
AT4G11660.1	1.3e-33	66.33	winged-helix DNA-binding transcription factor family protein	[more]
AT1G46264.1	1.7e-33	64.95	heat shock transcription factor B4	[more]
AT5G62020.1	1.2e-31	46.24	heat shock transcription factor B2A	[more]

BLAST of CmoCh03G000560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463360\|ref\|XP_004149402.1\|	1.2e-89	76.92	PREDICTED: heat stress transcription factor B-3 [Cucumis sativus]	[more]
gi\|659121625\|ref\|XP_008460754.1\|	8.4e-88	75.30	PREDICTED: LOW QUALITY PROTEIN: heat stress transcription factor B-3 [Cucumis me...	[more]
gi\|743869673\|ref\|XP_011033345.1\|	1.1e-76	71.69	PREDICTED: heat stress transcription factor B-3-like [Populus euphratica]	[more]
gi\|971533959\|gb\|ALV82484.1\|	1.9e-76	69.91	transcription factor HsfB3a [Vitis pseudoreticulata]	[more]
gi\|566208889\|ref\|XP_002323320.2\|	1.9e-76	71.69	Heat Stress Transcription Factor family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000232	HSF_DNA-bd
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR027725	HSF_fam

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009408	response to heat
biological_process	GO:0009407	toxin catabolic process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G000560.1	CmoCh03G000560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 36..59 score: 1.6E-18coord: 74..86 score: 1.6E-18coord: 87..99 score: 1.6
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 36..125 score: 1.9
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 32..125 score: 1.5
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PROSITE	PS00434	HSF_DOMAIN	coord: 75..99 scor
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 26..120 score: 1.2
IPR011991	Winged helix-turn-helix DNA-binding domain	unknown	SSF46785	"Winged helix" DNA-binding domain	coord: 32..125 score: 1.63
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 30..207 score: 1.1
None	No IPR available	unknown	Coil	Coil	coord: 156..183 scor
None	No IPR available	PANTHER	PTHR10015:SF168	HEAT STRESS TRANSCRIPTION FACTOR B-2A	coord: 30..207 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G000560	CmaCh03G000560	Cucurbita maxima (Rimu)	cmacmoB654
CmoCh03G000560	ClCG04G003410	Watermelon (Charleston Gray)	cmowcgB591
CmoCh03G000560	Cp4.1LG10g11490	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G000560	Cla97C04G070500	Watermelon (97103) v2	cmowmbB664
CmoCh03G000560	Bhi03G002111	Wax gourd	cmowgoB0788
CmoCh03G000560	Carg24984	Silver-seed gourd	carcmoB0712

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G000560	Bottle gourd (USVL1VR-Ls)	cmolsiB583
CmoCh03G000560	Cucumber (Gy14) v2	cgybcmoB513
CmoCh03G000560	Silver-seed gourd	carcmoB0394
CmoCh03G000560	Cucumber (Chinese Long) v3	cmocucB0786
CmoCh03G000560	Wax gourd	cmowgoB0796
CmoCh03G000560	Cucurbita moschata (Rifu)	cmocmoB461
CmoCh03G000560	Cucurbita maxima (Rimu)	cmacmoB863
CmoCh03G000560	Wild cucumber (PI 183967)	cmocpiB674
CmoCh03G000560	Cucumber (Chinese Long) v2	cmocuB662
CmoCh03G000560	Melon (DHL92) v3.5.1	cmomeB601
CmoCh03G000560	Watermelon (97103) v1	cmowmB625
CmoCh03G000560	Cucurbita pepo (Zucchini)	cmocpeB620