CmoCh02G010020 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G010020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Expressed protein
Location	Cmo_Chr02 : 6129879 .. 6134529 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAGACCTTTTTTTCGCGCAAGCTATAATTGGCAGTAGAGGAAGCGAAAATCCAAGCGCCAGCAATTACAACTTGGGATGATAGCTTCAACAACTCTGCCGCCATGGCAGCCACCGCTTCGAGCTCCTCTGAGACTGACGAGGACGAGGCCCTTAGTAATCCCTTTGCGGAGAAGTGTTGGCTTCGTTCAGGCCTACCGTCGCGGCGGTGGCAACAACGATGGTTTTGGCGAGACCTGGGACAAAGTATGGCGTGGCGCCAACGACGGCTTCGAAAAATTCGTGTTCGAGGCGAGGAAAACTGCGGAGCGACTTGACAGGCGTTATTCTGTATCGCGCCGTGTTAGTTCTGTTGCCCAATCGGCGGCTGACCGGGCGCGCGAGATTGATAGGGAGTTTGGAATTGGATTGCGTTGGCGTAATTTTACATTGGATTTTAGCAGAAATTGGCCAAGGGTTTGTACATTGGATTGATTGGTATTCGTGCTTGTGAAATGAATGTGTGTAGATAGGGCCTGCTTAATTGATATCTATTGTGGAAGTGAAGTTTTGAAGTTGTCTGACGGATTCGATCTTAATTAATGCTCTATAAGATTAGCAGTCAGTCCGAGTTTCAATGCTTGCTGCATTGATACTTATAATTTACCAGTTTCCACTAAAGTAGAATGAAAATCATAGCGTTTTCTTCTCCTTGAATGTCTTAATATCGGGTGTCTTATCTTTAAAATTTCTATTGAATTTTGTTGTTTTCTTATCTGTTTTGTTTTATAATGTCATTGCCATTCTTTATTACTCACTCTTATTTCCCTTGATATGTGCAGTATCGGAGGCAACTTAATGAATTTATGGACACGCCATTAGGAAAAGGTTTTGTGGTACGCATAAGTATAGCTTTTATTTTAGATAGTGTTCTTGTCAGTAAGATTACTGGTGTCACTTGTGGTCTCTGTTTAGTTTGTTCTTAGAGTGGCAATAATATGACGTCTCTTCACTTGATATTTTAAAGAAAAGAACAAGGGCCAGTGTAGAAATTTTCTTGAAGATCAACGAAAACGAGTAACTTGAAAGTCATAGTTTAAAAAGAATATGCAAAATTCTCCTACTCACTATACTTTCACTATCCTAGTTCTTATAATTAATTTTCTTTTATTTGTTTTATGTTACAGTAGCTAAATGGGGGATCTATCCTGTACCTTAGGTCAGGCATATGTCAAGCTTTATAATCTACGTCGTAAGAATTACTTATAATCAACTCTCAGCAGTACTATAAATGCTTTATGTTAACTATTAACATAGAAGATGTTCGAAGGAGGGAGTACTAGGAATCCAGTATCCACCAAAAGAGAAATTGAGGAGATTACAAAATGTTCCCCAACTTACTGGATAATTTCAAAGATCTAGAATTAGTTATCCAAAGAGATGCAGTCACAAATAAGATTCTTCACCTTCTTACCAGATTCTTTAAATTACAAATCTTCCAAATAAGTGGCTTTAAAAGCATGAGTAATTTCTTCTTCCCAAGTATCAAGATGATTTCAGAAGTTGGAGCATTTGAGATTGTTCTTTTGTGGCTCTCTCTTCAAATTTTTAATCAAGGTTGAATTTCAAAATTTGTTTTTAAGTTTGTGGACACATGGTTCTGTAGTGTTATTAGAAGCTAAATACATTTACTAAAATCTGACTAACTAGAAAATGGTGGGTCTTCTCCCGTTTGAAAATGAACTTTTATCTTATGAGTACCATGGATTTTACTAGCTGTAGGAAACAAGTCTTTTTCTATCAGTCTAGTTGATATTTCATGGGTTCTTGATTAAGTTAGAAGAAAAGAAGAAAAAAAATTTCTTTTTTTCAATATTAGATTTTGATTTTTTTGGCTAACTTTTTTACATTAGATTTTATTTGGAGTATTTTCTTTGGTTGGAACAAAGACTTCTGAAACTTCTTCAACGTCCATTGAACATCAAGTTCTTCAAGGAAGTTTTGTTGAAGGAACTTTTTGGGTGGGGAAATTCTCAAATCATAATGGAATATGTGGTAGTTACGGCTTTTGCCAATTAATGTGTCTGGAGATATATCTTGGTTCCAACTGGGGTTAACGAAGGTGGTTTGATCGTATTTTTTGGGCATTGTTGGGTAACCTCATACGTTGAGGCGTTAGATAGGAAGAATTAGATAGTTTTTTCTTGGGTGGAAGAACTTGGTTGCAAGAGGGGAAAATGAGGTGGAAAATTCTCTTGCACAATTATTAATTAGTATAAGGTTCGAGCTAATATCAGAATGAGATTTTAGCAAGGGAAGGGAAGAAATCAAGGGAAAGAATGGATTTGAAGGGGGAGAATTTCATTTTGGAGGGAGAAAAATTCAATGGAGAAAGGAAGAATGCAAAGTACAGGAATTGGCTGAGTTTAAAAGGGAAAATGAGGGGGAAGAAGAATTTTGAGTTCGCTCAAATTGATTGGGAAAATTCCATAGGTGTTGTAAGTTCCACTAGGATTAGATTGTCTTCTTGGAAGCCCTGAGGAAGACAATTTATGAAGGTCGTATGCTCAATCCATTTTTTGAGATTTGCATGCGCTTTAAGGGATTGTCAAGAACTCTGAAGAACTTTGTTGAAGAAAGGCTGAATTTTTGTGGGGGTTTCCTTAAGTTTGAAAGATGGAAATCCACACTATGGGGGTTGGATAAAGCTTTTTGGATTACCTTTGATGTTTTAGTGAAAGGACAGTGTGGCAGCAATAGGTGAAAATTATGGGGGCTTCATTCAATATGCTAAAAGAATTGTGAATATGTTTGATTGTTTGAAGGGCTTGCATACAAGGGTAAGTTGATATAGTTGGTTGAAGTGTAGATTGTTCATCTTAGCGTAAGTACTTATGTTGGTACTCAGTGGTTTAGGAGCCCACTAAGCTCTTGTCCTTAATTCATCAATAAAATTTGTCTCTTCTTTTAAAAAAAAGTACTTTTGTGGTTGAAATAGTTAATATGTCACTCTTCAAGATCATTGGTTGGACAAGTGAGGAGTGTCCATTCCCTCAAGTCCACAATATGGCAAGTTGTGTTGTATATGGTTTGGTATTTACTTGTAATCTACTCTGATCAATACTATACATGCAAATCCCAAGAAGTTACGCAATGTTGGTAAAAGTATTATCGATTTGAGTATAATTAGCATTTATAGCCTACTTATCAGTTTGATTATTGAATTGATAGATTTTGTTTAGAGAAACATGATTTTCTTTAGTGATTTAACATGGAATGATTTAGAAAGGAGGGAAGACTAACTGTCTATAGAACAACCGAAGAAAGTGCAAAATTCTCTCTAATTGACTATAATGAAAAGAAAATAGAATAATACAAAAATTCATAACTAGCTATCTTAGGAAATGCTCAATGAAGTCTAGAGAATTTGAGGTTGGAGCATTTGAGATACTTATCTTATGATCTTCAAATTTCTAATCAAGGTTGAATCTTCAAACATATTAGAAATTTCTAATCAAGGTGAATACATTTTCTGGTCCACTGCTCATTGGGACTTTTGCCGACATGATCTTCAAATTTCTAAACATGATCTTCAAAGAGCATTTGAGATACATTTCCTGTGTCGTGTAGTCAATTCACCTTTTCATTTTCCTGTAGACAATATTCTTCCTTTGGTTTGCACTGTCTGGATGGCTTTTCCGAGTCTTAATATTTGCAACATGGATACTACCATTTGCTGGTCCGCTGCTCATTGGGACTTTTGCCAATAGCCTCATAATAAAGGTATTTTTCTATGCTCATCCTTTACTGCCGTATGCGTGAGATTGTGTATTCTGCAATTATTATTACCTTATCAACTTTCTGCGACTATTTTGCTGGTTATTGTTCAACTTGTGCAAACGCTTGAAATTAATCTTGCTAAAGAAGCCACCTGACATACCTTTTAAAAATTACTAAAATTGATGATACTTTACATGTTTAGGACTACACTCGTAATCTAATTGTTCTTTGTTGTATTTATTTTACTTAAATGATGTTTAAATAACTTTTCAGGGTACATGTCCGGCCTGTAATAGGGAGTTTGCTGGGTACAAGAACCAAATTATTTCTTGCACAGGCTGTGGAAACATAGTGTGGCAGCCTAAAGGTCAAGGAGAAAACAGAAAAGGTGGTTCTGGTTCGAAGTCACAACCCAACGTCATTGATGTCGAGTTTGAGGAGAAATGATGAGGTTGGAAGGGATGGTGATTCCATGTCGACACAAAACGAAGAAAGAGTTACCAAGGACCGTAGATTGAAGATGTCGAGGTTGTGTGATCAAGTTCCACAGTATCCGTGTTCTCTTCTCCCTGGATAGTTACTGATGTAGTTTGGCAGCATTTGTTTGTAGTATCAATACATATGGTGGTGCATAAATGGGAAGTCCATGTAAAGGTACTTGAAATACATTATCCTCTCTTATAGCTATAGAAATGGTCTTTCTTTGCGATTTGTTTATTTCAAACTTATAACAAATGTTGCTAAAGCGACACTGAGGCAGTGAAACATTTTTGGTGTTTCAATTTCCAAGTAGTTCATGTTCAATTATGATTCTTGCCCAGTAAGAGCTGCACGTTGTAGATTGAATCAATTAAAACATTTGTTCTCTCCTGATTACAGGTGTGAAAACCGT

mRNA sequence

TAGAGACCTTTTTTTCGCGCAAGCTATAATTGGCAGTAGAGGAAGCGAAAATCCAAGCGCCAGCAATTACAACTTGGGATGATAGCTTCAACAACTCTGCCGCCATGGCAGCCACCGCTTCGAGCTCCTCTGAGACTGACGAGGACGAGGCCCTTAGTAATCCCTTTGCGGAGAAGTGTTGGCTTCGTTCAGGCCTACCGTCGCGGCGGTGGCAACAACGATGGTTTTGGCGAGACCTGGGACAAAGTATGGCGTGGCGCCAACGACGGCTTCGAAAAATTCGTGTTCGAGGCGAGGAAAACTGCGGAGCGACTTGACAGGCGTTATTCTGTATCGCGCCGTGTTAGTTCTGTTGCCCAATCGGCGGCTGACCGGGCGCGCGAGATTGATAGGGAGTTTGGAATTGGATTGCGTTGGCGTAATTTTACATTGGATTTTAGCAGAAATTGGCCAAGGTATCGGAGGCAACTTAATGAATTTATGGACACGCCATTAGGAAAAGGTTTTGTGACAATATTCTTCCTTTGGTTTGCACTGTCTGGATGGCTTTTCCGAGTCTTAATATTTGCAACATGGATACTACCATTTGCTGGTCCGCTGCTCATTGGGACTTTTGCCAATAGCCTCATAATAAAGGGTACATGTCCGGCCTGTAATAGGGAGTTTGCTGGGTACAAGAACCAAATTATTTCTTGCACAGGCTGTGGAAACATAGTGTGGCAGCCTAAAGGTCAAGGAGAAAACAGAAAAGGTGGTTCTGGTTCGAAGTCACAACCCAACGTCATTGATGTCGAGTTTGAGGAGAAATGATGAGGTTGGAAGGGATGGTGATTCCATGTCGACACAAAACGAAGAAAGAGTTACCAAGGACCGTAGATTGAAGATGTCGAGGTTGTGTGATCAAGTTCCACAGTATCCGTGTTCTCTTCTCCCTGGATAGTTACTGATGTAGTTTGGCAGCATTTGTTTGTAGTATCAATACATATGGTGGTGCATAAATGGGAAGTCCATGTAAAGGTACTTGAAATACATTATCCTCTCTTATAGCTATAGAAATGGTCTTTCTTTGCGATTTGTTTATTTCAAACTTATAACAAATGTTGCTAAAGCGACACTGAGGCAGTGAAACATTTTTGGTGTTTCAATTTCCAAGTAGTTCATGTTCAATTATGATTCTTGCCCAGTAAGAGCTGCACGTTGTAGATTGAATCAATTAAAACATTTGTTCTCTCCTGATTACAGGTGTGAAAACCGT

Coding sequence (CDS)

ATGATAGCTTCAACAACTCTGCCGCCATGGCAGCCACCGCTTCGAGCTCCTCTGAGACTGACGAGGACGAGGCCCTTAGTAATCCCTTTGCGGAGAAGTGTTGGCTTCGTTCAGGCCTACCGTCGCGGCGGTGGCAACAACGATGGTTTTGGCGAGACCTGGGACAAAGTATGGCGTGGCGCCAACGACGGCTTCGAAAAATTCGTGTTCGAGGCGAGGAAAACTGCGGAGCGACTTGACAGGCGTTATTCTGTATCGCGCCGTGTTAGTTCTGTTGCCCAATCGGCGGCTGACCGGGCGCGCGAGATTGATAGGGAGTTTGGAATTGGATTGCGTTGGCGTAATTTTACATTGGATTTTAGCAGAAATTGGCCAAGGTATCGGAGGCAACTTAATGAATTTATGGACACGCCATTAGGAAAAGGTTTTGTGACAATATTCTTCCTTTGGTTTGCACTGTCTGGATGGCTTTTCCGAGTCTTAATATTTGCAACATGGATACTACCATTTGCTGGTCCGCTGCTCATTGGGACTTTTGCCAATAGCCTCATAATAAAGGGTACATGTCCGGCCTGTAATAGGGAGTTTGCTGGGTACAAGAACCAAATTATTTCTTGCACAGGCTGTGGAAACATAGTGTGGCAGCCTAAAGGTCAAGGAGAAAACAGAAAAGGTGGTTCTGGTTCGAAGTCACAACCCAACGTCATTGATGTCGAGTTTGAGGAGAAATGA

Homology

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BLAST of CmoCh02G010020 vs. TrEMBL
Match: A0A0A0KPH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G168760 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 3.2e-118
Identity = 210/247 (85.02%), Postives = 222/247 (89.88%), Query Frame = 1


Query: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGG--NNDGFGETWDKVW 60
           MIAST LPPWQPPL+AP RL R+RPL+IP R  +GFVQAYRRGGG  NND FG+ W+KVW
Sbjct: 1   MIASTPLPPWQPPLQAPFRLRRSRPLIIPYRTPIGFVQAYRRGGGGGNNDAFGDAWNKVW 60

Query: 61  RGANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTL 120
           RGANDGFEKFVFEARKTAERLDRRYSVSRRV S AQS ADRAREIDREF IG+RWRNFTL
Sbjct: 61  RGANDGFEKFVFEARKTAERLDRRYSVSRRVGSAAQSVADRAREIDREFAIGMRWRNFTL 120

Query: 121 DFSRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGT 180
           DFSRNWPRYRRQLNEF+DTPLGK  VTIFFLWFALSGWLFR LIF TWILPFAGP+LIGT
Sbjct: 121 DFSRNWPRYRRQLNEFIDTPLGKSVVTIFFLWFALSGWLFRFLIFGTWILPFAGPILIGT 180

Query: 181 FANSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGE--NRKGGSGSKSQPNVI 240
           FANSL+IKG CPACNREFAGYKNQIISC GCGN+VWQPK  GE  +RKG SGSKSQPNVI
Sbjct: 181 FANSLVIKGNCPACNREFAGYKNQIISCAGCGNVVWQPKDHGEYNSRKGSSGSKSQPNVI 240

Query: 241 DVEFEEK 244
           DVEFEEK
Sbjct: 241 DVEFEEK 247

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BLAST of CmoCh02G010020 vs. TrEMBL
Match: A0A058ZXW8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00108 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 7.3e-86
Identity = 168/253 (66.40%), Postives = 191/253 (75.49%), Query Frame = 1


Query: 2   IASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDG----FGETWDKV 61
           + +TT  PW P L  P R  R RP  +P R +   V A+RR   N+       GE W   
Sbjct: 1   MVTTTSLPWNPAL--PARPRRVRPARLPTRAAPP-VLAFRRSDLNHFAQRVASGEAWRDA 60

Query: 62  WRGANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFT 121
           WR AND FE F+FEARKTAER+DRRYSVSRR+ +VAQSA+DRAREIDREF IG RWR FT
Sbjct: 61  WRSANDRFELFIFEARKTAERIDRRYSVSRRLGAVAQSASDRAREIDREFEIGQRWRTFT 120

Query: 122 LDFSRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIG 181
           LDFSRNWPRYRR++N+FM+TPLG+GF TIFFLWFALSGWLFR LIFATWILPFAGPLLIG
Sbjct: 121 LDFSRNWPRYRREINDFMETPLGRGFATIFFLWFALSGWLFRCLIFATWILPFAGPLLIG 180

Query: 182 TFANSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSG-------SK 241
           T AN+LIIKG CPAC R+F GYKNQI+ C  CGNIVWQPKG   +R G  G       SK
Sbjct: 181 TVANNLIIKGACPACKRQFVGYKNQIVRCANCGNIVWQPKGDFFSRDGFPGGGRRNTSSK 240

Query: 242 SQPNVIDVEFEEK 244
           S+P++IDVEFEEK
Sbjct: 241 SEPDIIDVEFEEK 250

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BLAST of CmoCh02G010020 vs. TrEMBL
Match: B9S1W7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1323580 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 4.4e-83
Identity = 159/240 (66.25%), Postives = 184/240 (76.67%), Query Frame = 1


Query: 4   STTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRGAND 63
           +TTLP  QPP   P  L +  P      R VG V+A++RG      F       WR AND
Sbjct: 2   ATTLPWRQPPF--PTLLKKRCPAAF---RHVGTVRAFQRGD-----FDRLARNAWRSAND 61

Query: 64  GFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDFSRN 123
           GFE+ ++EARK AER+DRRYSVSRRVS VAQSAA+RAREIDRE  IG+RWR FT+DFSRN
Sbjct: 62  GFEQLMYEARKAAERIDRRYSVSRRVSDVAQSAAERAREIDRELEIGVRWRTFTVDFSRN 121

Query: 124 WPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFANSL 183
           WPRYRRQLN+F+DTPLG+GF TIFFLWFALSGWLFR+LIFATW+LPFA PLLIGT AN+L
Sbjct: 122 WPRYRRQLNDFLDTPLGRGFATIFFLWFALSGWLFRILIFATWVLPFAAPLLIGTVANNL 181

Query: 184 IIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEFEEK 243
           +IKG CPAC R+F GYK+Q+I C GCGNIVWQP  +    +G S SKS  N+IDVEFEEK
Sbjct: 182 VIKGACPACKRQFVGYKSQVIRCAGCGNIVWQPDSRDGRGRGTSSSKSDTNIIDVEFEEK 231

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BLAST of CmoCh02G010020 vs. TrEMBL
Match: A0A0D2THI2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G029700 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 7.6e-83
Identity = 160/235 (68.09%), Postives = 182/235 (77.45%), Query Frame = 1


Query: 11  QPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRGANDGFEKFVF 70
           QPPL     L R RPL++   R   F    RR        GE     WR ANDGFE+FVF
Sbjct: 18  QPPL-----LQRRRPLLVQSFRRSDFDTFTRRMAS-----GEALKDAWRTANDGFEQFVF 77

Query: 71  EARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDFSRNWPRYRRQ 130
           EA+KTAERLDR+YSVSRR+SS AQSAADRAREIDREF IGLRWR F++DFSRNWPRYR+Q
Sbjct: 78  EAKKTAERLDRQYSVSRRLSSAAQSAADRAREIDREFEIGLRWRTFSMDFSRNWPRYRKQ 137

Query: 131 LNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFANSLIIKGTCP 190
           LN+F+DTPLG+ F TIFFLWFALSGW+FR LIFATWILPFAGPLLIGT AN+L+IKG CP
Sbjct: 138 LNDFLDTPLGRSFATIFFLWFALSGWMFRCLIFATWILPFAGPLLIGTVANNLVIKGACP 197

Query: 191 ACNREFAGYKNQIISCTGCGNIVWQPKGQGENR--KGGSGSKSQPNVIDVEFEEK 244
           AC R+F GYKNQI+ C  CGNIVWQP+G    R  KG +  KS+P++IDVEFEEK
Sbjct: 198 ACKRQFVGYKNQIVRCVSCGNIVWQPEGDFFRRDSKGTNSRKSEPDIIDVEFEEK 242

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BLAST of CmoCh02G010020 vs. TrEMBL
Match: A0A0L9V8U4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g214900 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-82
Identity = 156/251 (62.15%), Postives = 193/251 (76.89%), Query Frame = 1


Query: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGET---WDKV 60
           M+A+T    WQPP        R R   +  RR    ++A+  G G   G G+T   W + 
Sbjct: 1   MMAATVPVRWQPPS------VRFRAESVVKRRGRVTLKAFGNGNGKGKGRGDTDRVWREA 60

Query: 61  WRGANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFT 120
           WR ANDGFE+FVFEARKTAER+DRRYS+SRR+SSVA++AADRAREIDREF IG R+R F+
Sbjct: 61  WRSANDGFERFVFEARKTAERIDRRYSLSRRLSSVARAAADRAREIDREFEIGQRYRTFS 120

Query: 121 LDFSRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIG 180
           +DF RNWP+YR+QLN+F+D+P+GK F T+FF+WFALSGWLFR+LI ATW+LPFAGPLLIG
Sbjct: 121 IDFQRNWPKYRKQLNDFLDSPIGKSFATLFFIWFALSGWLFRILIIATWVLPFAGPLLIG 180

Query: 181 TFANSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPK-GQGENRKGGSG----SKSQ 240
           T ANSL+IKG+CPAC  +F GYKNQ+I CTGCGNIVWQPK G G+    G+G    S+S 
Sbjct: 181 TLANSLVIKGSCPACKMQFTGYKNQVIRCTGCGNIVWQPKGGNGDFFSRGAGGRTNSRSD 240

Query: 241 PNVIDVEFEEK 244
           P++IDV+FEEK
Sbjct: 241 PDIIDVDFEEK 245

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BLAST of CmoCh02G010020 vs. TAIR10
Match: AT2G44870.1 (AT2G44870.1 unknown protein)

HSP 1 Score: 273.1 bits (697), Expect = 1.7e-73
Identity = 143/242 (59.09%), Postives = 170/242 (70.25%), Query Frame = 1


Query: 19  RLTRTRPLVIPLRRSVGFVQ--AYRRGG----GNNDGFGETWDKVWRGANDGFEKFVFEA 78
           R T T P   P R +  F+Q  A++RG      +N   G+ W   WR ANDGFE+FVFEA
Sbjct: 8   RFTITTPYPHP-RAASSFLQVKAFQRGDFDRLADNVKSGKAWRDAWRSANDGFEQFVFEA 67

Query: 79  RKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDFSRNWPRYRRQLN 138
           +KTAER+DR+Y+VSRR SS A SAADRAREIDREFGI  R R  + DFSRN+P+YR+Q +
Sbjct: 68  KKTAERIDRQYAVSRRFSSAASSAADRAREIDREFGITPRVRTVSADFSRNFPKYRKQFS 127

Query: 139 EFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFANSLIIKGTCPAC 198
            F++TPLG  F TIFFLWFALSGWLFRV+I ATW+LP AGPLLIG  AN+ +IKG CPAC
Sbjct: 128 AFLNTPLGGSFATIFFLWFALSGWLFRVIIIATWVLPIAGPLLIGAVANNFVIKGECPAC 187

Query: 199 NREFAGYKNQIISCTGCGNIVWQPKG-----------QGENRKGGSGSKSQPNVIDVEFE 244
            R+F GYKNQII C GCGNIVWQP+G              N KG S    +  +IDV+FE
Sbjct: 188 KRQFIGYKNQIIRCEGCGNIVWQPQGDFFSKDGNNNNNNNNSKGNSKKPPKSQIIDVDFE 247

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BLAST of CmoCh02G010020 vs. NCBI nr
Match: gi|659073234|ref|XP_008467324.1| (PREDICTED: uncharacterized protein LOC103504702 [Cucumis melo])

HSP 1 Score: 448.4 bits (1152), Expect = 8.2e-123
Identity = 217/245 (88.57%), Postives = 226/245 (92.24%), Query Frame = 1


Query: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG 60
           MIAST LPPWQPPL APLRL R+RPL+IP R  +GFVQAYRRGGGNND FGE W+KVWRG
Sbjct: 1   MIASTPLPPWQPPLLAPLRLRRSRPLIIPYRTPIGFVQAYRRGGGNNDAFGEAWNKVWRG 60

Query: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF 120
           ANDGFEKFVFEARKTAERLDRRYSVSRRVSS AQS ADRAREIDREF IGLRWRNFTLDF
Sbjct: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSAAQSVADRAREIDREFAIGLRWRNFTLDF 120

Query: 121 SRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA 180
           SRNWPRYRRQLNEF+DTPLGK FVTIFFLWFALSGWLFR LIF TWILPFAGP+L+GTFA
Sbjct: 121 SRNWPRYRRQLNEFIDTPLGKSFVTIFFLWFALSGWLFRFLIFGTWILPFAGPILLGTFA 180

Query: 181 NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGE--NRKGGSGSKSQPNVIDV 240
           NSL+IKG CPACNREFAGYKNQIISC GCGNIVWQPKGQGE  +RKG SGSKSQPNVIDV
Sbjct: 181 NSLVIKGNCPACNREFAGYKNQIISCAGCGNIVWQPKGQGEYNSRKGSSGSKSQPNVIDV 240

Query: 241 EFEEK 244
           EFEEK
Sbjct: 241 EFEEK 245

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BLAST of CmoCh02G010020 vs. NCBI nr
Match: gi|449451842|ref|XP_004143669.1| (PREDICTED: uncharacterized protein LOC101219174 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 4.7e-118
Identity = 210/247 (85.02%), Postives = 222/247 (89.88%), Query Frame = 1


Query: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGG--NNDGFGETWDKVW 60
           MIAST LPPWQPPL+AP RL R+RPL+IP R  +GFVQAYRRGGG  NND FG+ W+KVW
Sbjct: 1   MIASTPLPPWQPPLQAPFRLRRSRPLIIPYRTPIGFVQAYRRGGGGGNNDAFGDAWNKVW 60

Query: 61  RGANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTL 120
           RGANDGFEKFVFEARKTAERLDRRYSVSRRV S AQS ADRAREIDREF IG+RWRNFTL
Sbjct: 61  RGANDGFEKFVFEARKTAERLDRRYSVSRRVGSAAQSVADRAREIDREFAIGMRWRNFTL 120

Query: 121 DFSRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGT 180
           DFSRNWPRYRRQLNEF+DTPLGK  VTIFFLWFALSGWLFR LIF TWILPFAGP+LIGT
Sbjct: 121 DFSRNWPRYRRQLNEFIDTPLGKSVVTIFFLWFALSGWLFRFLIFGTWILPFAGPILIGT 180

Query: 181 FANSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGE--NRKGGSGSKSQPNVI 240
           FANSL+IKG CPACNREFAGYKNQIISC GCGN+VWQPK  GE  +RKG SGSKSQPNVI
Sbjct: 181 FANSLVIKGNCPACNREFAGYKNQIISCAGCGNVVWQPKDHGEYNSRKGSSGSKSQPNVI 240

Query: 241 DVEFEEK 244
           DVEFEEK
Sbjct: 241 DVEFEEK 247

[Close]

BLAST of CmoCh02G010020 vs. NCBI nr
Match: gi|702487980|ref|XP_010034968.1| (PREDICTED: uncharacterized protein LOC104424300 [Eucalyptus grandis])

HSP 1 Score: 325.1 bits (832), Expect = 1.0e-85
Identity = 168/253 (66.40%), Postives = 191/253 (75.49%), Query Frame = 1


Query: 2   IASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDG----FGETWDKV 61
           + +TT  PW P L  P R  R RP  +P R +   V A+RR   N+       GE W   
Sbjct: 1   MVTTTSLPWNPAL--PARPRRVRPARLPTRAAPP-VLAFRRSDLNHFAQRVASGEAWRDA 60

Query: 62  WRGANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFT 121
           WR AND FE F+FEARKTAER+DRRYSVSRR+ +VAQSA+DRAREIDREF IG RWR FT
Sbjct: 61  WRSANDRFELFIFEARKTAERIDRRYSVSRRLGAVAQSASDRAREIDREFEIGQRWRTFT 120

Query: 122 LDFSRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIG 181
           LDFSRNWPRYRR++N+FM+TPLG+GF TIFFLWFALSGWLFR LIFATWILPFAGPLLIG
Sbjct: 121 LDFSRNWPRYRREINDFMETPLGRGFATIFFLWFALSGWLFRCLIFATWILPFAGPLLIG 180

Query: 182 TFANSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSG-------SK 241
           T AN+LIIKG CPAC R+F GYKNQI+ C  CGNIVWQPKG   +R G  G       SK
Sbjct: 181 TVANNLIIKGACPACKRQFVGYKNQIVRCANCGNIVWQPKGDFFSRDGFPGGGRRNTSSK 240

Query: 242 SQPNVIDVEFEEK 244
           S+P++IDVEFEEK
Sbjct: 241 SEPDIIDVEFEEK 250

[Close]

BLAST of CmoCh02G010020 vs. NCBI nr
Match: gi|255557915|ref|XP_002519986.1| (PREDICTED: uncharacterized protein LOC8283044 [Ricinus communis])

HSP 1 Score: 315.8 bits (808), Expect = 6.4e-83
Identity = 159/240 (66.25%), Postives = 184/240 (76.67%), Query Frame = 1


Query: 4   STTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRGAND 63
           +TTLP  QPP   P  L +  P      R VG V+A++RG      F       WR AND
Sbjct: 2   ATTLPWRQPPF--PTLLKKRCPAAF---RHVGTVRAFQRGD-----FDRLARNAWRSAND 61

Query: 64  GFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDFSRN 123
           GFE+ ++EARK AER+DRRYSVSRRVS VAQSAA+RAREIDRE  IG+RWR FT+DFSRN
Sbjct: 62  GFEQLMYEARKAAERIDRRYSVSRRVSDVAQSAAERAREIDRELEIGVRWRTFTVDFSRN 121

Query: 124 WPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFANSL 183
           WPRYRRQLN+F+DTPLG+GF TIFFLWFALSGWLFR+LIFATW+LPFA PLLIGT AN+L
Sbjct: 122 WPRYRRQLNDFLDTPLGRGFATIFFLWFALSGWLFRILIFATWVLPFAAPLLIGTVANNL 181

Query: 184 IIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEFEEK 243
           +IKG CPAC R+F GYK+Q+I C GCGNIVWQP  +    +G S SKS  N+IDVEFEEK
Sbjct: 182 VIKGACPACKRQFVGYKSQVIRCAGCGNIVWQPDSRDGRGRGTSSSKSDTNIIDVEFEEK 231

[Close]

BLAST of CmoCh02G010020 vs. NCBI nr
Match: gi|823252696|ref|XP_012458959.1| (PREDICTED: uncharacterized protein LOC105779655 [Gossypium raimondii])

HSP 1 Score: 315.1 bits (806), Expect = 1.1e-82
Identity = 160/235 (68.09%), Postives = 182/235 (77.45%), Query Frame = 1


Query: 11  QPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRGANDGFEKFVF 70
           QPPL     L R RPL++   R   F    RR        GE     WR ANDGFE+FVF
Sbjct: 18  QPPL-----LQRRRPLLVQSFRRSDFDTFTRRMAS-----GEALKDAWRTANDGFEQFVF 77

Query: 71  EARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDFSRNWPRYRRQ 130
           EA+KTAERLDR+YSVSRR+SS AQSAADRAREIDREF IGLRWR F++DFSRNWPRYR+Q
Sbjct: 78  EAKKTAERLDRQYSVSRRLSSAAQSAADRAREIDREFEIGLRWRTFSMDFSRNWPRYRKQ 137

Query: 131 LNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFANSLIIKGTCP 190
           LN+F+DTPLG+ F TIFFLWFALSGW+FR LIFATWILPFAGPLLIGT AN+L+IKG CP
Sbjct: 138 LNDFLDTPLGRSFATIFFLWFALSGWMFRCLIFATWILPFAGPLLIGTVANNLVIKGACP 197

Query: 191 ACNREFAGYKNQIISCTGCGNIVWQPKGQGENR--KGGSGSKSQPNVIDVEFEEK 244
           AC R+F GYKNQI+ C  CGNIVWQP+G    R  KG +  KS+P++IDVEFEEK
Sbjct: 198 ACKRQFVGYKNQIVRCVSCGNIVWQPEGDFFRRDSKGTNSRKSEPDIIDVEFEEK 242

The following BLAST results are available for this feature:

BLAST of CmoCh02G010020 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh02G010020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPH9_CUCSA	3.2e-118	85.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G168760 PE=4 SV=1	[more]
A0A058ZXW8_EUCGR	7.3e-86	66.40	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00108 PE=4 SV=1	[more]
B9S1W7_RICCO	4.4e-83	66.25	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1323580 PE=4 SV=1	[more]
A0A0D2THI2_GOSRA	7.6e-83	68.09	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G029700 PE=4 SV=1	[more]
A0A0L9V8U4_PHAAN	1.3e-82	62.15	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g214900 PE=4 SV=1	[more]

BLAST of CmoCh02G010020 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44870.1	1.7e-73	59.09	unknown protein	[more]

BLAST of CmoCh02G010020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073234\|ref\|XP_008467324.1\|	8.2e-123	88.57	PREDICTED: uncharacterized protein LOC103504702 [Cucumis melo]	[more]
gi\|449451842\|ref\|XP_004143669.1\|	4.7e-118	85.02	PREDICTED: uncharacterized protein LOC101219174 [Cucumis sativus]	[more]
gi\|702487980\|ref\|XP_010034968.1\|	1.0e-85	66.40	PREDICTED: uncharacterized protein LOC104424300 [Eucalyptus grandis]	[more]
gi\|255557915\|ref\|XP_002519986.1\|	6.4e-83	66.25	PREDICTED: uncharacterized protein LOC8283044 [Ricinus communis]	[more]
gi\|823252696\|ref\|XP_012458959.1\|	1.1e-82	68.09	PREDICTED: uncharacterized protein LOC105779655 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009536	plastid
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G010020.1	CmoCh02G010020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36356	FAMILY NOT NAMED	coord: 1..243 score: 1.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G010020	Cucsa.129140	Cucumber (Gy14) v1	cgycmoB0345
CmoCh02G010020	Cla003602	Watermelon (97103) v1	cmowmB569
CmoCh02G010020	Csa5G168760	Cucumber (Chinese Long) v2	cmocuB599
CmoCh02G010020	MELO3C005448	Melon (DHL92) v3.5.1	cmomeB520
CmoCh02G010020	ClCG01G004850	Watermelon (Charleston Gray)	cmowcgB517
CmoCh02G010020	CSPI05G07660	Wild cucumber (PI 183967)	cmocpiB607
CmoCh02G010020	Lsi09G005110	Bottle gourd (USVL1VR-Ls)	cmolsiB517
CmoCh02G010020	Cp4.1LG05g07220	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G010020	MELO3C005448.2	Melon (DHL92) v3.6.1	cmomedB597
CmoCh02G010020	CsaV3_5G005070	Cucumber (Chinese Long) v3	cmocucB0719
CmoCh02G010020	Cla97C01G005060	Watermelon (97103) v2	cmowmbB576
CmoCh02G010020	Bhi12G000628	Wax gourd	cmowgoB0717
CmoCh02G010020	CsGy5G005110	Cucumber (Gy14) v2	cgybcmoB614
CmoCh02G010020	Carg08486	Silver-seed gourd	carcmoB0971

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G010020	Cucurbita moschata (Rifu)	cmocmoB247
CmoCh02G010020	Cucurbita moschata (Rifu)	cmocmoB280
CmoCh02G010020	Cucurbita moschata (Rifu)	cmocmoB435
CmoCh02G010020	Cucumber (Gy14) v1	cgycmoB0195
CmoCh02G010020	Cucurbita maxima (Rimu)	cmacmoB295
CmoCh02G010020	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G010020	Wild cucumber (PI 183967)	cmocpiB589
CmoCh02G010020	Wild cucumber (PI 183967)	cmocpiB604
CmoCh02G010020	Cucumber (Chinese Long) v2	cmocuB583
CmoCh02G010020	Melon (DHL92) v3.5.1	cmomeB567
CmoCh02G010020	Melon (DHL92) v3.5.1	cmomeB573
CmoCh02G010020	Watermelon (Charleston Gray)	cmowcgB557
CmoCh02G010020	Watermelon (Charleston Gray)	cmowcgB565
CmoCh02G010020	Watermelon (97103) v1	cmowmB557
CmoCh02G010020	Watermelon (97103) v1	cmowmB558
CmoCh02G010020	Cucurbita pepo (Zucchini)	cmocpeB552
CmoCh02G010020	Bottle gourd (USVL1VR-Ls)	cmolsiB570
CmoCh02G010020	Bottle gourd (USVL1VR-Ls)	cmolsiB573
CmoCh02G010020	Cucumber (Gy14) v2	cgybcmoB365
CmoCh02G010020	Cucumber (Gy14) v2	cgybcmoB497
CmoCh02G010020	Melon (DHL92) v3.6.1	cmomedB649
CmoCh02G010020	Silver-seed gourd	carcmoB1389
CmoCh02G010020	Cucumber (Chinese Long) v3	cmocucB0697
CmoCh02G010020	Cucumber (Chinese Long) v3	cmocucB0714
CmoCh02G010020	Watermelon (97103) v2	cmowmbB621
CmoCh02G010020	Watermelon (97103) v2	cmowmbB630
CmoCh02G010020	Wax gourd	cmowgoB0723