Carg08486 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08486
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Replicase polyprotein 1ab
Location	Cucurbita_argyrosperma_scaffold_022 : 581306 .. 585838 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACATTTCTGACCGCAGCGCGAGCCTGCCTCAACGGTAGAGACCTTTTTTTCGCGCAAGCTATAATTGGCAGTAGAGGAAGCGAAAATCCAAGCGCCAGCAATTACAACTTGGGATGATAGCTTCAACAACTCTGCCGCCATGGCAGCCACCGCTTCGAGCTCCTCTGAGACTGACGAGGACGAGGCCCTTAGTAATCCCTTTGCGGAGAAGTGTTGGCTTCGTTCAGGCCTACCGTCGCGGCGGTGGCAACAACGATGGTTTTGGCGAGACCTGGGACAAAGTATGGCGTGGCGCCAACGACGGCTTCGAAAAATTCGTGTTCGAGGCGAGGAAAACTGCGGAGAGACTTGACAGGCGTTATTCTGTATCGCGCCGTGTTAGTTCTGTTGCCCAATCGGCGGCTGACCGGGCGCGCGAGATTGATAGGGAGTTTGGAATTGGATTGCGTTGGCGTAATTTTACATTGGATTTTAGCAGAAATTGGCCAAGGGTTTGTACATTGGATTGATTGGTATTCGTGCTTGTGAAATGAATGTGTGTAGATAGGGCCTGCTTAATTGATATCTATTGTGGAAGTGAAGTTTTGAAGTTGTCTGACGGATTCGATCTTAATTAATGCTCTATAAGATTAGCAGTCAGTCCGAGTTTCAATGCTTGCTGCATTGATACTTATAATTTACCAGTTTCCACTAAAGTAGAATGAAAATCATAGCGTTTTCTTCTCCTTGAATGTCTTAATATCGGGTGTCTTATCTTTAAAATTTCTATTGAATTTTGTTGTTTTCTTATCTGTTTTGTTTTATAATGTCATTGCCATTCTTTATTACTCACTCTTATTTCCCTTGATATGTGCAGTATCGGAGGCAACTTAATGAATTTATGGACACGCCATTAGGAAAAGGTTTTGTGGTACGCATAAGTATAGCTTTTATTTTAGATAGTGTTCTTGTCAGTAAGATTACTGGTGTCACTTGTGGTCTCTGTTTAGTTTGTTCTTAGAGTGGCAATAATATGACGTCTCTTCACTTGATATTTTAAAGAAAAGAACAAGGGCCAGTGTAGAAATTTTCTTGAAGATCAACGAAAACGAGTAACTTGAAAGTCATAGTTTAAAAAGAATATGCAAAATTCTCCTACTCACTATACTTTCACTATCCTAGTTCTTATAATTAATTTTCTTTTATTTGTTTTATGTTACAGTAGCTAAATGGGGGATCTATCCTGTACCTTAGGTCAGGCATATGTCAAGCTTTATAATCTACGTCGTAAGAATTACTTATAATCAACTCTCAGCAGTACTATAAATGCTTTATGTTAACTATTAACATAGAAGATGTTCGAAGGAGGGAGTACTAGGAATCCAGTATCCACCAAAAGAGAAATTGAGGAGATTACAAAATGTTCCCCAACTTACTGGATAATTTCAAAGATCTAGAATTAGTTATCCAAAGAGATGCAGTCACAAATAAGATTCTTCACCTTCTTACCAGATTCTTTAAATTACAAATCTTCCAAATAAGTGGCTTTAAAAGCATGAGTAATTTCTTCTTCCCAAGTATCAAGATGATTTCAGAAGTTGGAGCATTTGAGATTGTTCTTTTGTGGCTCTCTCTTCAAATTTTTAATCAAGGTTGAATTTCAAAATTTGTTTTTAAGTTTGTGGACACATGGTTCTGTAGTGTTATTAGAAGCTAAATACATTTACTAAAATCTGACGAACTAGAAAATGGTGGGTCTTCTCCCGTTTGAAAATGAACTTTTATCTTATGAGTACCATGGATTTTACTAGCTGTAGGAAACAAGTCTTTTTCTATCAGTCTAGTTGATATTTCATGGGTTCTTGATTAAGTTAGAAGAAAAGAAGAAAAAAAATTTCTTTTTTTCAATATTAGATTTTGATTTTTTTGGCTAACTTTTTTACATTAGATTTTATTTGGAGTATTTTCTTTGGTTGGAACAAAGACTTCTGAAACTTCTTCAACGTCCATTGAACATCAAGTTCTTCAAGGAAGTTTTGTTGAAGGAACTTTTTGGGTGGGGAAATTCTCAAATCATAATGGAATATGTGGTAGTTACGGCTTTTGCCAATTAATGTGTCTGGAGATATATCTTGGTTCCAACTGGGGTTAACGAAGGTGGTTTGATCGTATTTTTTGGGCATTGTTGGGTAACCTCATACGTTGAGGCGTTAGATAGGAAGAATTAGATAGTTTTTTCTTGGGTGGAAGAACTTGGTTGCAAGAGGGGAAAATGAGGTGGAAAATTCTCTTGCACAATTATTAATTAGTATAAGGTTCGAGCTAATATCAGAATGAGATTTTAGCAAGGGAAGGGAAGAAATCAAGGGAAAGAATGGATTTGAAGGGGGAGAATTTCATTTTGGAGGGAGAAAAATTCAATGGAGAAAGGAAGAATGCAAAGTACAGGAATTGGCTGAGTTTAAAAGGGAAAATGAGGGGGAAGAAGAATTTTGAGTTCGCTCAAATTGATTGGGAAAATTCCATAGGTGTTGTAAGTTCCACTAGGATTAGATTGTCTTCTTGGAAGCCCTGAGGAAGACAATTTATGAAGGTCGTATGCTCAATCCATTTTTTGAGATTTGCATGCGCTTTAAGGGATTGTCAAGAACTCTGAAGAACTTTGTTGAAGAAAGGCTGAATTTTTGTGGGGGTTTCCTTAAGTTTGAAAGATGGAAATCCACACTATGGGGGTTGGATAAAGCTTTTTGGATTACCTTTGATGTTTTAGAGAAAGGACAGTGTGGCAGCAATAGGTGAAAATTATGGGGGCTTCATTCAATATGCTAAAAGAATTGTGAATATGTTTGATTGTTTGAAGGGCTTGCATACAAGGGTAAGTTGATATAGTTGGTTGAAGTGTAGATTGTTCATCTTAGCGTAAGTACTTATGTTGGTACTCAGTGGTTTAGGAGCCCACTAAGCTCTTGTCCTTAATTCATCAATAAAATTTGTCTCTTCTTTTAAAAAAAAGTACTTTTGTGGTTGAAATAGTTAATATGTCACTCTTCAAGATCATTGGTTGGACAAGTGAGGAGTGTCCATTCCCTCAAGTCCACAATATGGCAAGTTGTGTTGTATATGGTTTGGTATTTACTTGTAATCTACTCTGATCAATACTATACATGCAAATCCCAAGAAGTTACGCAATGTTGGTAAAAGTATTATCGATTTGAGTATAATTAGCATTTATAGCCTACTTATCAGTTTGATTATTGAATTGATAGATTTTGTTTAGAGAAACATGATTTTCTTTAGTGATTTAACATGGAATGATTTAGAAAGGAGGGAAGACTAACTGTCTATAGAACAACCGAAGAAAGTGCAAAATTCTCTCTAATTGACTATAATGAAAAGAAAATAGAATAATACAAAAATTCATAACTAGCTATCTTAGGAAATGCTCAATGAAGTCTAGAGAATTTGAGGTTGGAGCATTTGAGATACTTATCTTATGATCTTCAAATTTCTAATCAAGGTTGAATCTTCAAACATATTAGAAATTTCTAATCAAGGTGAATACATTTTCTGGTCCACTGCTCATTGGGACTTTTGCCGACATGATCTTCAAATTTCTAAACATGATCTTCAAAGAGCATTTGAGATACATTTCCTGTGTCGTGTAGTCAATTCACCTTTTCATTTTCCTGTAGACAATATTCTTCCTTTGGTTTGCACTGTCTGGATGGCTTTTCCGAGTCTTAATATTTGCAACATGGATACTACCATTTGCTGGTCCGCTGCTCATTGGGACTTTTGCCAATAGCCTCATAATAAAGGTATTTTTCTATGCTCATCCTTTACTGCCGTATGCGTGAGATTGTGTATTCTGCAATTATTATTACCTTATCAACTTTCTGCGACTATTTTGCTGGTTATTGTTCAACTTGTGCAAACGCTTGAAATTAATCTTGCTAAAGAAGCCACCTGACATACCTTTTAAAAATTACTAAAATTGATGATACTTTACATGTTTAGGACTACACTCGTAATCTAATTGTTCTTTGTTGTATTTATTTTACTTAAATGATGTTTAAATAACTTTTCAGGGTACATGTCCGGCCTGTAATAGGGAGTTTGCTGGGTACAAGAACCAAATTATTTCTTGCACAGGCTGTGGAAACATAGTGTGGCAGCCTAAAGGTCAAGGAGAAAACAGAAAAGGTGGTTCTGGTTCGAAGTCACAACCCAACGTCATTGATGTCGAGTTTGAGGAGAAATGATGAGGTTGGAAGGGATGGTGATTCCATGTCGACACAAAACGAAGAAAGAGTTACCAAGGACCGTAGATTGAAGATGTCGAGGTTGTGTGATCAAGTTCCACAGTATCCGTGTTCTCTTCTCCCTGGATAGTTACTGATGTAGTTTGGCAGCATTTGTTTGTAGTATCAATACATATGGTGGTGCATAAATGGGAAGTCCATGTAAAGGTACTTGAAATACATTATCCTCTCTTATAGCTATAGAAATGGTCTTTCTTTGCGATTTGTTTATTTCAAACTTATAACAAATG

mRNA sequence

AAACATTTCTGACCGCAGCGCGAGCCTGCCTCAACGGTAGAGACCTTTTTTTCGCGCAAGCTATAATTGGCAGTAGAGGAAGCGAAAATCCAAGCGCCAGCAATTACAACTTGGGATGATAGCTTCAACAACTCTGCCGCCATGGCAGCCACCGCTTCGAGCTCCTCTGAGACTGACGAGGACGAGGCCCTTAGTAATCCCTTTGCGGAGAAGTGTTGGCTTCGTTCAGGCCTACCGTCGCGGCGGTGGCAACAACGATGGTTTTGGCGAGACCTGGGACAAAGTATGGCGTGGCGCCAACGACGGCTTCGAAAAATTCGTGTTCGAGGCGAGGAAAACTGCGGAGAGACTTGACAGGCGTTATTCTGTATCGCGCCGTGTTAGTTCTGTTGCCCAATCGGCGGCTGACCGGGCGCGCGAGATTGATAGGGAGTTTGGAATTGGATTGCGTTGGCGTAATTTTACATTGGATTTTAGCAGAAATTGGCCAAGGTATCGGAGGCAACTTAATGAATTTATGGACACGCCATTAGGAAAAGGTTTTGTGACAATATTCTTCCTTTGGTTTGCACTGTCTGGATGGCTTTTCCGAGTCTTAATATTTGCAACATGGATACTACCATTTGCTGGTCCGCTGCTCATTGGGACTTTTGCCAATAGCCTCATAATAAAGGGTACATGTCCGGCCTGTAATAGGGAGTTTGCTGGGTACAAGAACCAAATTATTTCTTGCACAGGCTGTGGAAACATAGTGTGGCAGCCTAAAGGTCAAGGAGAAAACAGAAAAGGTGGTTCTGGTTCGAAGTCACAACCCAACGTCATTGATGTCGAGTTTGAGGAGAAATGATGAGGTTGGAAGGGATGGTGATTCCATGTCGACACAAAACGAAGAAAGAGTTACCAAGGACCGTAGATTGAAGATGTCGAGGTTGTGTGATCAAGTTCCACAGTATCCGTGTTCTCTTCTCCCTGGATAGTTACTGATGTAGTTTGGCAGCATTTGTTTGTAGTATCAATACATATGGTGGTGCATAAATGGGAAGTCCATGTAAAGGTACTTGAAATACATTATCCTCTCTTATAGCTATAGAAATGGTCTTTCTTTGCGATTTGTTTATTTCAAACTTATAACAAATG

Coding sequence (CDS)

ATGATAGCTTCAACAACTCTGCCGCCATGGCAGCCACCGCTTCGAGCTCCTCTGAGACTGACGAGGACGAGGCCCTTAGTAATCCCTTTGCGGAGAAGTGTTGGCTTCGTTCAGGCCTACCGTCGCGGCGGTGGCAACAACGATGGTTTTGGCGAGACCTGGGACAAAGTATGGCGTGGCGCCAACGACGGCTTCGAAAAATTCGTGTTCGAGGCGAGGAAAACTGCGGAGAGACTTGACAGGCGTTATTCTGTATCGCGCCGTGTTAGTTCTGTTGCCCAATCGGCGGCTGACCGGGCGCGCGAGATTGATAGGGAGTTTGGAATTGGATTGCGTTGGCGTAATTTTACATTGGATTTTAGCAGAAATTGGCCAAGGTATCGGAGGCAACTTAATGAATTTATGGACACGCCATTAGGAAAAGGTTTTGTGACAATATTCTTCCTTTGGTTTGCACTGTCTGGATGGCTTTTCCGAGTCTTAATATTTGCAACATGGATACTACCATTTGCTGGTCCGCTGCTCATTGGGACTTTTGCCAATAGCCTCATAATAAAGGGTACATGTCCGGCCTGTAATAGGGAGTTTGCTGGGTACAAGAACCAAATTATTTCTTGCACAGGCTGTGGAAACATAGTGTGGCAGCCTAAAGGTCAAGGAGAAAACAGAAAAGGTGGTTCTGGTTCGAAGTCACAACCCAACGTCATTGATGTCGAGTTTGAGGAGAAATGA

Protein sequence

MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRGANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDFSRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFANSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEFEEK

Homology

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BLAST of Carg08486 vs. NCBI nr
Match: XP_022957921.1 (uncharacterized protein LOC111459308 [Cucurbita moschata])

HSP 1 Score: 498.0 bits (1281), Expect = 1.8e-137
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG 60
           MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG
Sbjct: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG 60

Query: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF 120
           ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF
Sbjct: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF 120

Query: 121 SRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA 180
           SRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA
Sbjct: 121 SRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA 180

Query: 181 NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEF 240
           NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEF
Sbjct: 181 NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEF 240

Query: 241 EEK 244
           EEK
Sbjct: 241 EEK 243

[Close]

BLAST of Carg08486 vs. NCBI nr
Match: XP_023533650.1 (uncharacterized protein LOC111795447 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.0 bits (1273), Expect = 1.5e-136
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG 60
           MIASTTLPPWQP LRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG
Sbjct: 1   MIASTTLPPWQPTLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG 60

Query: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF 120
           ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF
Sbjct: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF 120

Query: 121 SRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA 180
           SRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA
Sbjct: 121 SRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA 180

Query: 181 NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEF 240
           NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEF
Sbjct: 181 NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEF 240

Query: 241 EEK 244
           EEK
Sbjct: 241 EEK 243

[Close]

BLAST of Carg08486 vs. NCBI nr
Match: XP_022996029.1 (uncharacterized protein LOC111491357 [Cucurbita maxima])

HSP 1 Score: 493.8 bits (1270), Expect = 3.3e-136
Identity = 241/243 (99.18%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG 60
           MIASTTLPPWQP LRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG
Sbjct: 1   MIASTTLPPWQPTLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG 60

Query: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF 120
           ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF
Sbjct: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF 120

Query: 121 SRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA 180
           SRNWPRYRRQLN+FMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA
Sbjct: 121 SRNWPRYRRQLNQFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA 180

Query: 181 NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEF 240
           NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEF
Sbjct: 181 NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSGSKSQPNVIDVEF 240

Query: 241 EEK 244
           EEK
Sbjct: 241 EEK 243

[Close]

BLAST of Carg08486 vs. NCBI nr
Match: XP_008467324.1 (PREDICTED: uncharacterized protein LOC103504702 [Cucumis melo])

HSP 1 Score: 448.4 bits (1152), Expect = 1.6e-122
Identity = 217/245 (88.57%), Postives = 226/245 (92.24%), Query Frame = 0


Query: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG 60
           MIAST LPPWQPPL APLRL R+RPL+IP R  +GFVQAYRRGGGNND FGE W+KVWRG
Sbjct: 1   MIASTPLPPWQPPLLAPLRLRRSRPLIIPYRTPIGFVQAYRRGGGNNDAFGEAWNKVWRG 60

Query: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF 120
           ANDGFEKFVFEARKTAERLDRRYSVSRRVSS AQS ADRAREIDREF IGLRWRNFTLDF
Sbjct: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSAAQSVADRAREIDREFAIGLRWRNFTLDF 120

Query: 121 SRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA 180
           SRNWPRYRRQLNEF+DTPLGK FVTIFFLWFALSGWLFR LIF TWILPFAGP+L+GTFA
Sbjct: 121 SRNWPRYRRQLNEFIDTPLGKSFVTIFFLWFALSGWLFRFLIFGTWILPFAGPILLGTFA 180

Query: 181 NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGE--NRKGGSGSKSQPNVIDV 240
           NSL+IKG CPACNREFAGYKNQIISC GCGNIVWQPKGQGE  +RKG SGSKSQPNVIDV
Sbjct: 181 NSLVIKGNCPACNREFAGYKNQIISCAGCGNIVWQPKGQGEYNSRKGSSGSKSQPNVIDV 240

Query: 241 EFEEK 244
           EFEEK
Sbjct: 241 EFEEK 245

[Close]

BLAST of Carg08486 vs. NCBI nr
Match: XP_022159671.1 (uncharacterized protein LOC111026015 [Momordica charantia])

HSP 1 Score: 436.8 bits (1122), Expect = 4.8e-119
Identity = 224/245 (91.43%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG 60
           MIAST LPPWQPPL+APLRL R RP  IPLRR VGFVQAYRR  GN+D FGE W+KVWRG
Sbjct: 1   MIASTALPPWQPPLQAPLRL-RRRP-SIPLRR-VGFVQAYRR--GNSDDFGEAWNKVWRG 60

Query: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF 120
           ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAA+RAREIDREFGIGLRWRNFTLDF
Sbjct: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAAERAREIDREFGIGLRWRNFTLDF 120

Query: 121 SRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA 180
           SRNWPRYRRQLNEFMDTPLGK FVTIFFLWFALSGWLFR LIFATWILPFAGPLLIGTFA
Sbjct: 121 SRNWPRYRRQLNEFMDTPLGKSFVTIFFLWFALSGWLFRFLIFATWILPFAGPLLIGTFA 180

Query: 181 NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGE--NRKGGSGSKSQPNVIDV 240
           NSLIIKGTCPACNREFAGYKNQIISC+GCGNIVWQPKGQGE  +RKG SGSKSQPNVIDV
Sbjct: 181 NSLIIKGTCPACNREFAGYKNQIISCSGCGNIVWQPKGQGEYNSRKGNSGSKSQPNVIDV 240

Query: 241 EFEEK 244
           EFEEK
Sbjct: 241 EFEEK 240

[Close]

BLAST of Carg08486 vs. TAIR10
Match: AT2G44870.1 (unknown protein)

HSP 1 Score: 241.1 bits (614), Expect = 7.0e-64
Identity = 130/242 (53.72%), Postives = 158/242 (65.29%), Query Frame = 0


Query: 19  RLTRTRPLVIPLRRSVGFVQ--AYRRGG----GNNDGFGETWDKVWRGANDGFEKFVFEA 78
           R T T P   P R +  F+Q  A++RG      +N   G+ W   WR ANDGFE+FVFEA
Sbjct: 8   RFTITTPYPHP-RAASSFLQVKAFQRGDFDRLADNVKSGKAWRDAWRSANDGFEQFVFEA 67

Query: 79  RKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDFSRNWPRYRRQLN 138
           +KTAER+DR+Y+VSRR SS A SAAD         GI  R R  + DFSRN+P+YR+Q +
Sbjct: 68  KKTAERIDRQYAVSRRFSSAASSAADXXXXXXXXXGITPRVRTVSADFSRNFPKYRKQFS 127

Query: 139 EFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFANSLIIKGTCPAC 198
            F++TPLG  F TIFFLWFALSGWLFRV+I ATW+LP AGPLLIG  AN+ +IKG CPAC
Sbjct: 128 AFLNTPLGGSFATIFFLWFALSGWLFRVIIIATWVLPIAGPLLIGAVANNFVIKGECPAC 187

Query: 199 NREFAGYKNQIISCTGCGNIVWQPKGQGENR-----------KGGSGSKSQPNVIDVEFE 244
            R+F GYKNQII C GCGNIVWQP+G   ++                      +IDV+FE
Sbjct: 188 KRQFIGYKNQIIRCEGCGNIVWQPQGDFFSKXXXXXXXXXXXXXXXXXXXXXQIIDVDFE 247

[Close]

BLAST of Carg08486 vs. TrEMBL
Match: tr|A0A1S3CT98|A0A1S3CT98_CUCME (uncharacterized protein LOC103504702 OS=Cucumis melo OX=3656 GN=LOC103504702 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.1e-122
Identity = 217/245 (88.57%), Postives = 226/245 (92.24%), Query Frame = 0


Query: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRG 60
           MIAST LPPWQPPL APLRL R+RPL+IP R  +GFVQAYRRGGGNND FGE W+KVWRG
Sbjct: 1   MIASTPLPPWQPPLLAPLRLRRSRPLIIPYRTPIGFVQAYRRGGGNNDAFGEAWNKVWRG 60

Query: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDF 120
           ANDGFEKFVFEARKTAERLDRRYSVSRRVSS AQS ADRAREIDREF IGLRWRNFTLDF
Sbjct: 61  ANDGFEKFVFEARKTAERLDRRYSVSRRVSSAAQSVADRAREIDREFAIGLRWRNFTLDF 120

Query: 121 SRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFA 180
           SRNWPRYRRQLNEF+DTPLGK FVTIFFLWFALSGWLFR LIF TWILPFAGP+L+GTFA
Sbjct: 121 SRNWPRYRRQLNEFIDTPLGKSFVTIFFLWFALSGWLFRFLIFGTWILPFAGPILLGTFA 180

Query: 181 NSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGE--NRKGGSGSKSQPNVIDV 240
           NSL+IKG CPACNREFAGYKNQIISC GCGNIVWQPKGQGE  +RKG SGSKSQPNVIDV
Sbjct: 181 NSLVIKGNCPACNREFAGYKNQIISCAGCGNIVWQPKGQGEYNSRKGSSGSKSQPNVIDV 240

Query: 241 EFEEK 244
           EFEEK
Sbjct: 241 EFEEK 245

[Close]

BLAST of Carg08486 vs. TrEMBL
Match: tr|A0A0A0KPH9|A0A0A0KPH9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168760 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.1e-114
Identity = 206/247 (83.40%), Postives = 218/247 (88.26%), Query Frame = 0


Query: 1   MIASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRG--GGNNDGFGETWDKVW 60
           MIAST LPPWQPPL+AP RL R+RPL+IP R  +GFVQAYRRG      D FG+ W+KVW
Sbjct: 1   MIASTPLPPWQPPLQAPFRLRRSRPLIIPYRTPIGFVQAYRRGXXXXXXDAFGDAWNKVW 60

Query: 61  RGANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTL 120
           RGANDGFEKFVFEARKTAERLDRRYSVSRRV S AQS ADRAREIDREF IG+RWRNFTL
Sbjct: 61  RGANDGFEKFVFEARKTAERLDRRYSVSRRVGSAAQSVADRAREIDREFAIGMRWRNFTL 120

Query: 121 DFSRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGT 180
           DFSRNWPRYRRQLNEF+DTPLGK  VTIFFLWFALSGWLFR LIF TWILPFAGP+LIGT
Sbjct: 121 DFSRNWPRYRRQLNEFIDTPLGKSVVTIFFLWFALSGWLFRFLIFGTWILPFAGPILIGT 180

Query: 181 FANSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGE--NRKGGSGSKSQPNVI 240
           FANSL+IKG CPACNREFAGYKNQIISC GCGN+VWQPK  GE  +RKG SGSKSQPNVI
Sbjct: 181 FANSLVIKGNCPACNREFAGYKNQIISCAGCGNVVWQPKDHGEYNSRKGSSGSKSQPNVI 240

Query: 241 DVEFEEK 244
           DVEFEEK
Sbjct: 241 DVEFEEK 247

[Close]

BLAST of Carg08486 vs. TrEMBL
Match: tr|A0A058ZXW8|A0A058ZXW8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00108 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.3e-85
Identity = 168/253 (66.40%), Postives = 191/253 (75.49%), Query Frame = 0


Query: 2   IASTTLPPWQPPLRAPLRLTRTRPLVIPLRRSVGFVQAYRRGGGNN----DGFGETWDKV 61
           + +TT  PW P L  P R  R RP  +P R +   V A+RR   N+       GE W   
Sbjct: 1   MVTTTSLPWNPAL--PARPRRVRPARLPTRAAPP-VLAFRRSDLNHFAQRVASGEAWRDA 60

Query: 62  WRGANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFT 121
           WR AND FE F+FEARKTAER+DRRYSVSRR+ +VAQSA+DRAREIDREF IG RWR FT
Sbjct: 61  WRSANDRFELFIFEARKTAERIDRRYSVSRRLGAVAQSASDRAREIDREFEIGQRWRTFT 120

Query: 122 LDFSRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIG 181
           LDFSRNWPRYRR++N+FM+TPLG+GF TIFFLWFALSGWLFR LIFATWILPFAGPLLIG
Sbjct: 121 LDFSRNWPRYRREINDFMETPLGRGFATIFFLWFALSGWLFRCLIFATWILPFAGPLLIG 180

Query: 182 TFANSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKGGSG-------SK 241
           T AN+LIIKG CPAC R+F GYKNQI+ C  CGNIVWQPKG   +R G  G       SK
Sbjct: 181 TVANNLIIKGACPACKRQFVGYKNQIVRCANCGNIVWQPKGDFFSRDGFPGGGRRNTSSK 240

Query: 242 SQPNVIDVEFEEK 244
           S+P++IDVEFEEK
Sbjct: 241 SEPDIIDVEFEEK 250

[Close]

BLAST of Carg08486 vs. TrEMBL
Match: tr|A0A2P4IAL8|A0A2P4IAL8_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_58292 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 7.4e-84
Identity = 172/261 (65.90%), Postives = 199/261 (76.25%), Query Frame = 0


Query: 2   IASTTLPPWQP--PLRAPL-------RLTRTRPLVIPLRRSVGFVQAYRRGGGNNDGF-- 61
           +A+TTL PWQP  PL+  L       RL  T   V P  R V  ++A++R   + DGF  
Sbjct: 4   MATTTL-PWQPSLPLKLKLKPRYCHPRLPTTTTTVFP-SRHVAPIRAFQR--SDIDGFAK 63

Query: 62  ----GETWDKVWRGANDGFEKFVFEARKTAERLDRRYSVSRRVSSVAQSAADRAREIDRE 121
               GE     WR ANDGFE+F++EA+K AERLDRRYSVSRR+SSVA+SAADRAREIDRE
Sbjct: 64  RMVSGEALKDAWRSANDGFEQFLYEAKKAAERLDRRYSVSRRLSSVARSAADRAREIDRE 123

Query: 122 FGIGLRWRNFTLDFSRNWPRYRRQLNEFMDTPLGKGFVTIFFLWFALSGWLFRVLIFATW 181
           F IG+RWR F+LDF+RN PRYR+QLN+F+DTPLG+ F TIFFLWFALSGWLFRVLIFATW
Sbjct: 124 FEIGMRWRTFSLDFTRNLPRYRKQLNDFLDTPLGRSFATIFFLWFALSGWLFRVLIFATW 183

Query: 182 ILPFAGPLLIGTFANSLIIKGTCPACNREFAGYKNQIISCTGCGNIVWQPKGQGENRKG- 241
           ILPFAGPLLIGT AN+L+IKG CPAC R+F GYKNQII CT CGNIVWQPKG   +R G 
Sbjct: 184 ILPFAGPLLIGTIANNLVIKGACPACKRQFVGYKNQIIRCTSCGNIVWQPKGDFFSRDGK 243

Query: 242 ---GSGSKSQPNVIDVEFEEK 244
               S SKS P++IDVEFEEK
Sbjct: 244 GTSSSKSKSDPDIIDVEFEEK 260

[Close]

BLAST of Carg08486 vs. TrEMBL
Match: tr|A0A1R3FZZ8|A0A1R3FZZ8_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29824 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.3e-83
Identity = 159/226 (70.35%), Postives = 178/226 (78.76%), Query Frame = 0


Query: 20  LTRTRPLVIPLRRSVGFVQAYRRGGGNNDGFGETWDKVWRGANDGFEKFVFEARKTAERL 79
           L R RPL+I   R   F    RR        GE W   WR ANDGFE+FVFEA+KTAERL
Sbjct: 22  LQRRRPLLIQSFRRSDFDSFARRMTS-----GEAWKDAWRTANDGFEQFVFEAKKTAERL 81

Query: 80  DRRYSVSRRVSSVAQSAADRAREIDREFGIGLRWRNFTLDFSRNWPRYRRQLNEFMDTPL 139
           DR+YSVSRRVSSV QSA DRARE DREF IG RWRNFT+DFSRNWPRYR+QLN+F++TPL
Sbjct: 82  DRQYSVSRRVSSVVQSATDRAREFDREFEIGPRWRNFTMDFSRNWPRYRKQLNDFLNTPL 141

Query: 140 GKGFVTIFFLWFALSGWLFRVLIFATWILPFAGPLLIGTFANSLIIKGTCPACNREFAGY 199
           G+ F TIFFLWFALSGWLFR LIFATWILPFAGPLLIGT AN+L+IKG CPAC R+F GY
Sbjct: 142 GRSFATIFFLWFALSGWLFRFLIFATWILPFAGPLLIGTVANNLVIKGACPACKRQFVGY 201

Query: 200 KNQIISCTGCGNIVWQPKGQ--GENRKGGSGSKSQPNVIDVEFEEK 244
           KNQII C  CGNIVWQP+G   G + +G S  KS+P++IDVEFEEK
Sbjct: 202 KNQIIRCGSCGNIVWQPEGDFFGRDSRGRSSRKSEPDIIDVEFEEK 242

The following BLAST results are available for this feature:

BLAST of Carg08486 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957921.1	1.8e-137	100.00	uncharacterized protein LOC111459308 [Cucurbita moschata]	[more]
XP_023533650.1	1.5e-136	99.59	uncharacterized protein LOC111795447 [Cucurbita pepo subsp. pepo]	[more]
XP_022996029.1	3.3e-136	99.18	uncharacterized protein LOC111491357 [Cucurbita maxima]	[more]
XP_008467324.1	1.6e-122	88.57	PREDICTED: uncharacterized protein LOC103504702 [Cucumis melo]	[more]
XP_022159671.1	4.8e-119	91.43	uncharacterized protein LOC111026015 [Momordica charantia]	[more]

BLAST of Carg08486 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44870.1	7.0e-64	53.72	unknown protein	[more]

BLAST of Carg08486 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg08486 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CT98\|A0A1S3CT98_CUCME	1.1e-122	88.57	uncharacterized protein LOC103504702 OS=Cucumis melo OX=3656 GN=LOC103504702 PE=...	[more]
tr\|A0A0A0KPH9\|A0A0A0KPH9_CUCSA	1.1e-114	83.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168760 PE=4 SV=1	[more]
tr\|A0A058ZXW8\|A0A058ZXW8_EUCGR	1.3e-85	66.40	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00108 PE=4 SV...	[more]
tr\|A0A2P4IAL8\|A0A2P4IAL8_QUESU	7.4e-84	65.90	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_58292 PE=4 SV=1	[more]
tr\|A0A1R3FZZ8\|A0A1R3FZZ8_COCAP	1.3e-83	70.35	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29824 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08486-RA	Carg08486-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..243
None	No IPR available	PANTHER	PTHR36356	FAMILY NOT NAMED	coord: 45..243

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08486	Cla003602	Watermelon (97103) v1	carwmB0710
Carg08486	Csa5G168760	Cucumber (Chinese Long) v2	carcuB0733
Carg08486	MELO3C005448	Melon (DHL92) v3.5.1	carmeB0705
Carg08486	ClCG01G004850	Watermelon (Charleston Gray)	carwcgB0688
Carg08486	CSPI05G07660	Wild cucumber (PI 183967)	carcpiB0749
Carg08486	Cucsa.129140	Cucumber (Gy14) v1	carcgyB0796
Carg08486	CmaCh02G009890	Cucurbita maxima (Rimu)	carcmaB0999
Carg08486	CmoCh02G010020	Cucurbita moschata (Rifu)	carcmoB0971
Carg08486	Lsi09G005110	Bottle gourd (USVL1VR-Ls)	carlsiB648
Carg08486	Cp4.1LG05g07220	Cucurbita pepo (Zucchini)	carcpeB1002
Carg08486	CsGy5G005110	Cucumber (Gy14) v2	carcgybB0711
Carg08486	MELO3C005448.2	Melon (DHL92) v3.6.1	carmedB0718
Carg08486	CsaV3_5G005070	Cucumber (Chinese Long) v3	carcucB0752
Carg08486	Cla97C01G005060	Watermelon (97103) v2	carwmbB0741
Carg08486	Bhi12G000628	Wax gourd	carwgoB0833

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08486	Wax gourd	carwgoB0837
Carg08486	Silver-seed gourd	carcarB586
Carg08486	Cucumber (Gy14) v2	carcgybB0708
Carg08486	Cucumber (Gy14) v1	carcgyB0793
Carg08486	Cucurbita maxima (Rimu)	carcmaB0995
Carg08486	Cucurbita maxima (Rimu)	carcmaB0993
Carg08486	Cucurbita moschata (Rifu)	carcmoB0965
Carg08486	Cucurbita moschata (Rifu)	carcmoB0966
Carg08486	Cucurbita moschata (Rifu)	carcmoB0967
Carg08486	Cucurbita moschata (Rifu)	carcmoB0972
Carg08486	Cucurbita pepo (Zucchini)	carcpeB0995
Carg08486	Cucurbita pepo (Zucchini)	carcpeB0998
Carg08486	Cucurbita pepo (Zucchini)	carcpeB1001
Carg08486	Wild cucumber (PI 183967)	carcpiB0746
Carg08486	Cucumber (Chinese Long) v3	carcucB0749
Carg08486	Bottle gourd (USVL1VR-Ls)	carlsiB653
Carg08486	Melon (DHL92) v3.5.1	carmeB0710
Carg08486	Melon (DHL92) v3.6.1	carmedB0723
Carg08486	Watermelon (Charleston Gray)	carwcgB0691
Carg08486	Watermelon (97103) v1	carwmB0707
Carg08486	Watermelon (97103) v2	carwmbB0743
Carg08486	Watermelon (97103) v2	carwmbB0744