CmoCh02G005730 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G005730
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
LocationCmo_Chr02 : 3351001 .. 3354759 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAAAAGCGCACAACTCTTCCTCCTTCAAGAGTTTCTTGAAATCCCGGACCCAAAAACCTCACAGAAACCCTAAAAGGAGAGTTTGTAATCAGATGTCGGACCCAAACGATACGGATTCCGACGCCCCCGAAGAGTTCACCGCCGAGCAGGTTCGTTGTTTCCAACTTTCTATATTTCTATTTGCCGCTTGTTTGAACTCGATCGTAGTTCCTCCAGCTATGTTCTAAGGAAGCAGGGATTTATATTAGGAACTCATCTGTTGCAGGGAATACAGCAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAGCGCTAGGTGTGTTTTCAATCCGTATTTCCCATTACCGAATTGTATTTGGTGTCCAACCTTGTGCTTTCATCATTATTTCACCAATGACTTTTCTATTTAGTTTTTGTAAAGTTTGATTCTCTATTTATTTCCATGGATTTTTCGTCATCCTTCATGGGATTTAATGGCTTCACGTGTAATCTACTTCTGCATTGTGTTTAGTCTTCTCACTGCGTTTGGAGCTGTTTTTGTGGTTTTGTGTTTTCACTTCTCTTATTTGAAGTTGAGCTGACATTGTAGATTCTTAAGACATGGCTTCAATTATTTATTTCGATTGCATATGATATTGTCGATGGATTTCTGCTATATATATTTATTGTATATGTATATGTATGTACATATAGATATATGAGTGAGGATTTGAACCTTCAAGAAGTAGGCGATAACCCCAAAATTTCTATCTTAAACTCCAGACGACGATGCAACAAGATTAGGAATATCAACATGTTTATGTTTCTCTCTAACCAAATTTACTGAAGAGTTGCTTCACCATGTTATAGAAGAGTTCCTTAGCCTTCAGTTTGAAGGAGTTCCCTCCTGCAATTGAAAGTTCAGATCCTTGACCTGCAAAGGGAAAACATAAAATAGTCCTGCATCCTGTACCACACTGCAATAAAATGGGCAGAGAAAGGAAACAAGATTCGATCTCTCATCTTATAGTCTACTCATATTGCAACACCCTGCCCTAAGGATAACACAAGCAATTATTTTTCTGAGTTCCATCAGCACTAGTAGTGTTTGTTGCTACCATGGATCCCAAACCAGTAGAACACGCTTGTCTTCTTCTGACACCTATGATTCCATACCAGACTACTGAGGGAAGGAGGATAGCAATCTCAGTTGTTGACCTCTTGAAGAACAGGCTCAAGAAAATTTTCCTGAACTTTTTGAATACCAAATCCTGACATGTTGTCCATCGGTAGTAAAGAGATGATTTACCTACCTGATCAAAGTTAACCCTCCCTGAAACTTCCAATCTTGAGATTCCTGCTAAATACCAAGTTCCATAGTCTCAGAATTTCTAGAGTCATAAATGTTGAACTTCTTTTATTTGTGAGGGCATAGACTTAAGATCCGAGATAGTTGAAAGAGTTTTGGGACCGTTGATCCTTCTTGACGTGAACAGACGTATCTACGTTTGCCCACCTTGATAACTGAATTCTCTTAGGAATTATGTGACATTGTACTTTTGGAGATTAGAAACCACAAGCTTACGTGCTGCTATACGAGCATCTACCAGAAGTCCAAATCCCAATCTAACAAAAAGGGCCAATCCATCAGGTTAGGGTTTCTCATAATCAAGCATGCAGGATAACCCTTCCTCTTTATTTTTTTTCCGCATTAATCAGGATATTCTTAACGAGTATGTGATTCAGGGTTTGTCCATCTTCCTTGAAGGGCAATGGAAATGGTAAAGAGAAGGACCATCTAAGGTTTTGTAGTGCAAATATTAACAGCACACTCATGTCAAAGCTTAAACCATGTTTTGAAGGACTATTGAACCTTAAACCTTGAGGCTTGCCTAGCTTCAGGTTGAGGCTCAAATTTTTAAGCCTCTATACTTGGCCTTCTTTGATTCATAAGGGGGTTATGCCTTAACCGTAAAAATGTATTACATCTACTGTAGGATATAACATCTTGAAACCCAATCAATAATTTTTCAGTCCAACAGAAGAGACCAAACAATGATACCCACTAAAAGTCTCCAAAGGTCTTTTTGTCAGAGAAGCCTATGCAGTGAAACTTTGCTCAGAAATCCATAATAGAAGGAATGCACCAATTTTTTTGGCTTGCCAGCAATATGTTCATAAAATCGAAGTGAAGTGGAAAGTAATGGAAAGACAATCCAACGATTTTCCTTGATTCTGCAGGGTTTTTTATTTACAAATACAATTCTAAATTCCTTTTCATATGGCTTTATATGTTATTGTCTGTCTTTTTTTCATTGTTCAATAATCTAGTTCAAAAAGAACAAAGGTGGTTTAATTTTGTGCATAAATTGCTGAGGCTCAATGTTCACAACAATGGTAACTATGATTTCTTTTCACGGTTTAATTTCTTGTTGGCAATTATTTCATGAGTTTCTTACCTCAAATGCAGTAGGATTCTATGGTTGTTTCATGCTGTTAATTAAGGTGCATGTAAATTGGCTTGGATTGCTAATTATGTTTATTGCTGTTGTAATTAGATCAGGTTTTTGTGTTATTATTGAGCCCTTGATTTGAGCCTGGGCAATTCTGTCTTTTACTTAATGGGTTGCCCTCTGATCTGTTTTCCATCTTCTGCACTAACAAGAATAAGATTTTTAGGCACACCAGATGCTCTGAACCATGTTTTTTAATCAATGAAACAAATGATAGTTGGCTAGGATGGCTTGCTTTGTCATGCCCATTGCTATAGGGTATTTTCCACTAAGAGCATTACTGAATCGAGGATAGTCGTTCATTCTCAGAATTCAGTGTAGTGTTGGGAATTCCTGCCCGCGATGCAATTAGATGATATCTGAAAGGATAGTGTCCTTTGATGCACGTCTGGTTATTACTTGGTTTTTTGGACAGAACATGATAAATGGCATTATTTATGTAGGGTTGTCCGTGAAGGTAAAGAACGTCGTAGACAGTGGGCCGAAAAGAAAACACCACGCGCATCTAAAAAAAGCGAAACTGTCGAAGATGTAGCAGAAACCCCTAGACACAATGATCAAGTTAGCAAGTTGGGAATGCTTCCCAGTAATCTTGTCCAACTGCTTGCCGAGCGTGAGAAGTACGTCTCTTTCCCACTCTCCATTCATTTTGCTCAGATTATAGTTTCGCTAAACATCTAATTTGGTATATACTCTCCATCTATAGACAAGTTTTCTCATCAGACCCAGGCGACGAAAAGCCTGCAGCTAAATCAAAAACAAAGAGGAAGAAAAGCAAAAGCTCTGGGTGAGGGACCTGACTCTGTAGTTACTGAAGATGTTCTTCTTGATTTTATTATACCTTCTGAAATAGAACGACTCATTTTTGTAAATGCAGGATTGAAACGGTTCTTTTAAACGAGAGAGCACCATCTCAATGCTTACAGAACTCATTGGAATTTTTGAAGAAAAGGAAGATGAATATTCCAAGGTCATCATCGGTTCTCGACAATTCTAACCAAGCGTTACGCCTTCTTTCTTCATCGGGCCTTTTAACTAAGAAATAGCATTTTTTCTTGTTTGTTTCTAAAGCGATTATTGGGTTTCTGTCAGCTTCAACAGGATAATGTACAATGTATTTGAGATTTTAAGTTCAAGACTGATGCAACATGGAGAGTAAAAAAGTTCATTGATTTCTTATAGTGGGCATAGTCTCATAGCCACATAATTGAAAATGATGGGAGCAGTAAATGTTAGTGAATGAATGATTTTATTATGCAGTAA

mRNA sequence

CTCAAAAGCGCACAACTCTTCCTCCTTCAAGAGTTTCTTGAAATCCCGGACCCAAAAACCTCACAGAAACCCTAAAAGGAGAGTTTGTAATCAGATGTCGGACCCAAACGATACGGATTCCGACGCCCCCGAAGAGTTCACCGCCGAGCAGGGAATACAGCAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAGCGCTAGGGTTGTCCGTGAAGGTAAAGAACGTCGTAGACAGTGGGCCGAAAAGAAAACACCACGCGCATCTAAAAAAAGCGAAACTGTCGAAGATGTAGCAGAAACCCCTAGACACAATGATCAAGTTAGCAAGTTGGGAATGCTTCCCAGTAATCTTGTCCAACTGCTTGCCGAGCGTGAGAAACAAGTTTTCTCATCAGACCCAGGCGACGAAAAGCCTGCAGCTAAATCAAAAACAAAGAGGAAGAAAAGCAAAAGCTCTGGGATTGAAACGGTTCTTTTAAACGAGAGAGCACCATCTCAATGCTTACAGAACTCATTGGAATTTTTGAAGAAAAGGAAGATGAATATTCCAAGGTCATCATCGGTTCTCGACAATTCTAACCAAGCGTTACGCCTTCTTTCTTCATCGGGCCTTTTAACTAAGAAATAGCATTTTTTCTTGTTTGTTTCTAAAGCGATTATTGGGTTTCTGTCAGCTTCAACAGGATAATGTACAATGTATTTGAGATTTTAAGTTCAAGACTGATGCAACATGGAGAGTAAAAAAGTTCATTGATTTCTTATAGTGGGCATAGTCTCATAGCCACATAATTGAAAATGATGGGAGCAGTAAATGTTAGTGAATGAATGATTTTATTATGCAGTAA

Coding sequence (CDS)

ATGTCGGACCCAAACGATACGGATTCCGACGCCCCCGAAGAGTTCACCGCCGAGCAGGGAATACAGCAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAGCGCTAGGGTTGTCCGTGAAGGTAAAGAACGTCGTAGACAGTGGGCCGAAAAGAAAACACCACGCGCATCTAAAAAAAGCGAAACTGTCGAAGATGTAGCAGAAACCCCTAGACACAATGATCAAGTTAGCAAGTTGGGAATGCTTCCCAGTAATCTTGTCCAACTGCTTGCCGAGCGTGAGAAACAAGTTTTCTCATCAGACCCAGGCGACGAAAAGCCTGCAGCTAAATCAAAAACAAAGAGGAAGAAAAGCAAAAGCTCTGGGATTGAAACGGTTCTTTTAAACGAGAGAGCACCATCTCAATGCTTACAGAACTCATTGGAATTTTTGAAGAAAAGGAAGATGAATATTCCAAGGTCATCATCGGTTCTCGACAATTCTAACCAAGCGTTACGCCTTCTTTCTTCATCGGGCCTTTTAACTAAGAAATAG
Homology
[Close]
BLAST of CmoCh02G005730 vs. TrEMBL
Match: A0A0A0LM07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292200 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 8.6e-68
Identity = 145/178 (81.46%), Postives = 158/178 (88.76%), Query Frame = 1 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            E VED+AE PR++D++SKLG LPSN+VQLL +REKQVFSSD GDEKPA K K KRKK+K
Sbjct: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSGIETVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 178

[Close]
BLAST of CmoCh02G005730 vs. TrEMBL
Match: B9S8Q8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0603660 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-48
Identity = 112/178 (62.92%), Postives = 142/178 (79.78%), Query Frame = 1 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD  D+DSDAPEEFT+EQ I+QDE IRKVQKE+ ARV REGKERRRQWA++KTPR SK 
Sbjct: 1   MSDREDSDSDAPEEFTSEQAIKQDEVIRKVQKENKARVAREGKERRRQWAQRKTPRPSKG 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            + V++V ET    + +    MLP+++VQLLA REK++F SD  DEK  A+   ++KK K
Sbjct: 61  DDNVQNVKETETEKELLDTAEMLPNDIVQLLAAREKKIFLSDSEDEKVEAELPPRKKKLK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSG+ETV+L + +P QCLQNSL+FLKK+KM + RSSSVL+NSNQALRL+S+ GLL+KK
Sbjct: 121 SSGMETVILKDMSPPQCLQNSLQFLKKKKMQVSRSSSVLNNSNQALRLISTLGLLSKK 178

[Close]
BLAST of CmoCh02G005730 vs. TrEMBL
Match: M5VR61_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012046mg PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.4e-48
Identity = 116/181 (64.09%), Postives = 138/181 (76.24%), Query Frame = 1 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAE----KKTPR 60
           MSD  D DSDAPEE TAEQGIQQDEE+ KVQKE+ ARVVREGKERRRQWA+    KKTP+
Sbjct: 1   MSDREDYDSDAPEELTAEQGIQQDEELSKVQKENKARVVREGKERRRQWAQRKTPKKTPQ 60

Query: 61  ASKKSETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKR 120
            S   E+V+D  ET  H + +   GMLPSN+V+LLA REKQVF SD  DE   +KS  K+
Sbjct: 61  PSAGVESVQDAPETETHQESLGSAGMLPSNIVELLAAREKQVFHSDSEDENTDSKSTKKK 120

Query: 121 KKSKSSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLT 178
           K+ KSSG++TV+L E    +CLQNSL FL+KRKM + RS +VL+NSNQALR LSSSGLL+
Sbjct: 121 KRLKSSGVDTVILKETPAPKCLQNSLAFLEKRKMQVSRSHAVLNNSNQALRFLSSSGLLS 180

[Close]
BLAST of CmoCh02G005730 vs. TrEMBL
Match: W9QGX9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020296 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.4e-48
Identity = 118/179 (65.92%), Postives = 142/179 (79.33%), Query Frame = 1 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD    DSDAPEEFTAEQGIQQDE I KVQKE+ ARVVREGKERRR WA++KTPR S+K
Sbjct: 1   MSDNESYDSDAPEEFTAEQGIQQDEVITKVQKENKARVVREGKERRRLWAQRKTPRPSQK 60

Query: 61  SETV--EDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKT--KR 120
            E+V  +DV+ET    +   + GMLP+ +VQ+LA REKQVF SD  D+K     +T  K+
Sbjct: 61  VESVHSQDVSETETPTESSGREGMLPNEIVQMLASREKQVFLSDSEDDKKTQLKRTSKKK 120

Query: 121 KKSKSSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLL 176
           +K KSSG++TVLLNE  P+QCLQNSLEFLKKRKM +PRS++VL NS++ALRLLSSSGLL
Sbjct: 121 RKPKSSGVDTVLLNEIPPAQCLQNSLEFLKKRKMQVPRSNAVLKNSHKALRLLSSSGLL 179

[Close]
BLAST of CmoCh02G005730 vs. TrEMBL
Match: A0A067K6I4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12302 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.4e-47
Identity = 111/179 (62.01%), Postives = 142/179 (79.33%), Query Frame = 1 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD  D+DSDAPEEFT+EQG++QDEEIRKVQKE+ AR+ REGKERRR WA++KT R SK 
Sbjct: 1   MSDREDSDSDAPEEFTSEQGVKQDEEIRKVQKENKARISREGKERRRLWAQRKTARPSKV 60

Query: 61  -SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKS 120
             E+V+DV ET    + +    MLP+++VQLLA REK+VF SD  DEK   K   ++KK 
Sbjct: 61  VDESVQDVMETEMEKEPLGAGEMLPNDIVQLLAAREKKVFLSDSEDEKVETKLSARKKKP 120

Query: 121 KSSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           K+SG+ETV+L + +P  CLQNSLEFL+K+KM + RSSSVL+NSNQALRL+S+SG+L+KK
Sbjct: 121 KTSGMETVILKDLSPPPCLQNSLEFLRKKKMQVSRSSSVLNNSNQALRLISTSGVLSKK 179

[Close]
BLAST of CmoCh02G005730 vs. TAIR10
Match: AT4G37090.1 (AT4G37090.1 unknown protein)

HSP 1 Score: 124.8 bits (312), Expect = 5.4e-29
Identity = 85/183 (46.45%), Postives = 116/183 (63.39%), Query Frame = 1 

Query: 1   MSD--PNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRAS 60
           MSD    D+DSDAPEE T EQ   ++E + K+Q+E+  RV RE KERR+  AE+ T R S
Sbjct: 1   MSDNKDRDSDSDAPEELTQEQAKLEEEALWKIQRENKNRVSREKKERRKLMAEQVTLRKS 60

Query: 61  KKSETVEDVAET--PRHNDQ-VSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTK 120
           +K E +EDV E   P  N + ++  G L  +++  LAEREKQ   SD  +E+       +
Sbjct: 61  RKIEIIEDVVEEEEPEENSEALANKGFLSKDIIDFLAEREKQKAESD-SEEEEIIDELPR 120

Query: 121 RKKSKSSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLL 179
           +KK KSSGIETV+  E  P +CL+  L+FLK R+  +PRSSSV+ NS QALRL + + L 
Sbjct: 121 KKKQKSSGIETVIYKEIPPPECLKTGLDFLKMRRAQVPRSSSVIKNSGQALRLATGAALA 180

[Close]
BLAST of CmoCh02G005730 vs. NCBI nr
Match: gi|449460626|ref|XP_004148046.1| (PREDICTED: uncharacterized protein LOC101208336 [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 1.2e-67
Identity = 145/178 (81.46%), Postives = 158/178 (88.76%), Query Frame = 1 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            E VED+AE PR++D++SKLG LPSN+VQLL +REKQVFSSD GDEKPA K K KRKK+K
Sbjct: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSGIETVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 178

[Close]
BLAST of CmoCh02G005730 vs. NCBI nr
Match: gi|659116015|ref|XP_008457855.1| (PREDICTED: uncharacterized protein LOC103497440 [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 5.7e-65
Identity = 144/179 (80.45%), Postives = 158/179 (88.27%), Query Frame = 1 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQ ES ARV+REGKERRR WAEKKTPR SKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQNESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            E VED+AE PR++D+VSKLG LPSN+VQLL +REKQVFSSD GDEKPA K K KRKK+K
Sbjct: 61  GEIVEDLAEPPRNDDKVSKLGTLPSNVVQLLVDREKQVFSSDLGDEKPAIKPKQKRKKTK 120

Query: 121 -SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
            SSGIETVLL+ER PS CLQNSLEFLKKRKMN+ RSS+VL+N NQA RLLSSSGLLTKK
Sbjct: 121 SSSGIETVLLSERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179

[Close]
BLAST of CmoCh02G005730 vs. NCBI nr
Match: gi|645272845|ref|XP_008241590.1| (PREDICTED: uncharacterized protein LOC103340006 [Prunus mume])

HSP 1 Score: 201.1 bits (510), Expect = 1.7e-48
Identity = 117/181 (64.64%), Postives = 138/181 (76.24%), Query Frame = 1 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAE----KKTPR 60
           MSD  D DSDAPEEFTAEQGIQQDEE+ KVQKE+ ARVVREGKERRRQWA+    KKTP+
Sbjct: 1   MSDREDYDSDAPEEFTAEQGIQQDEELSKVQKENKARVVREGKERRRQWAQRKTPKKTPQ 60

Query: 61  ASKKSETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKR 120
            S   E+V+D  ET  H + +   GMLPSN+V+LLA REKQVF SD  DE   +KS  K+
Sbjct: 61  PSAGVESVQDAPETETHQESLGSAGMLPSNIVELLAAREKQVFHSDSEDENTDSKSTKKK 120

Query: 121 KKSKSSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLT 178
           K  KSSG++TV+L E    +CLQNSL FL+KRKM + RS +VL+NSNQALR LSSSGLL+
Sbjct: 121 KSLKSSGVDTVILKETPAPKCLQNSLAFLEKRKMQVSRSHAVLNNSNQALRFLSSSGLLS 180

[Close]
BLAST of CmoCh02G005730 vs. NCBI nr
Match: gi|255562743|ref|XP_002522377.1| (PREDICTED: uncharacterized protein LOC8260573 [Ricinus communis])

HSP 1 Score: 200.3 bits (508), Expect = 2.9e-48
Identity = 112/178 (62.92%), Postives = 142/178 (79.78%), Query Frame = 1 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD  D+DSDAPEEFT+EQ I+QDE IRKVQKE+ ARV REGKERRRQWA++KTPR SK 
Sbjct: 1   MSDREDSDSDAPEEFTSEQAIKQDEVIRKVQKENKARVAREGKERRRQWAQRKTPRPSKG 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            + V++V ET    + +    MLP+++VQLLA REK++F SD  DEK  A+   ++KK K
Sbjct: 61  DDNVQNVKETETEKELLDTAEMLPNDIVQLLAAREKKIFLSDSEDEKVEAELPPRKKKLK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSG+ETV+L + +P QCLQNSL+FLKK+KM + RSSSVL+NSNQALRL+S+ GLL+KK
Sbjct: 121 SSGMETVILKDMSPPQCLQNSLQFLKKKKMQVSRSSSVLNNSNQALRLISTLGLLSKK 178

[Close]
BLAST of CmoCh02G005730 vs. NCBI nr
Match: gi|703071356|ref|XP_010089010.1| (hypothetical protein L484_020296 [Morus notabilis])

HSP 1 Score: 199.5 bits (506), Expect = 4.9e-48
Identity = 118/179 (65.92%), Postives = 142/179 (79.33%), Query Frame = 1 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD    DSDAPEEFTAEQGIQQDE I KVQKE+ ARVVREGKERRR WA++KTPR S+K
Sbjct: 1   MSDNESYDSDAPEEFTAEQGIQQDEVITKVQKENKARVVREGKERRRLWAQRKTPRPSQK 60

Query: 61  SETV--EDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKT--KR 120
            E+V  +DV+ET    +   + GMLP+ +VQ+LA REKQVF SD  D+K     +T  K+
Sbjct: 61  VESVHSQDVSETETPTESSGREGMLPNEIVQMLASREKQVFLSDSEDDKKTQLKRTSKKK 120

Query: 121 KKSKSSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLL 176
           +K KSSG++TVLLNE  P+QCLQNSLEFLKKRKM +PRS++VL NS++ALRLLSSSGLL
Sbjct: 121 RKPKSSGVDTVLLNEIPPAQCLQNSLEFLKKRKMQVPRSNAVLKNSHKALRLLSSSGLL 179

The following BLAST results are available for this feature:
BLAST of CmoCh02G005730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh02G005730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LM07_CUCSA8.6e-6881.46Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292200 PE=4 SV=1[more]
B9S8Q8_RICCO2.0e-4862.92Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0603660 PE=4 SV=1[more]
M5VR61_PRUPE3.4e-4864.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012046mg PE=4 SV=1[more]
W9QGX9_9ROSA3.4e-4865.92Uncharacterized protein OS=Morus notabilis GN=L484_020296 PE=4 SV=1[more]
A0A067K6I4_JATCU8.4e-4762.01Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12302 PE=4 SV=1[more]
BLAST of CmoCh02G005730 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37090.15.4e-2946.45 unknown protein[more]
BLAST of CmoCh02G005730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460626|ref|XP_004148046.1|1.2e-6781.46PREDICTED: uncharacterized protein LOC101208336 [Cucumis sativus][more]
gi|659116015|ref|XP_008457855.1|5.7e-6580.45PREDICTED: uncharacterized protein LOC103497440 [Cucumis melo][more]
gi|645272845|ref|XP_008241590.1|1.7e-4864.64PREDICTED: uncharacterized protein LOC103340006 [Prunus mume][more]
gi|255562743|ref|XP_002522377.1|2.9e-4862.92PREDICTED: uncharacterized protein LOC8260573 [Ricinus communis][more]
gi|703071356|ref|XP_010089010.1|4.9e-4865.92hypothetical protein L484_020296 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G005730.1CmoCh02G005730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36387FAMILY NOT NAMEDcoord: 3..178
score: 5.5
NoneNo IPR availablePANTHERPTHR36387:SF1SUBFAMILY NOT NAMEDcoord: 3..178
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh02G005730Cucsa.366550Cucumber (Gy14) v1cgycmoB1020
CmoCh02G005730CmaCh02G005640Cucurbita maxima (Rimu)cmacmoB619
CmoCh02G005730Cla020163Watermelon (97103) v1cmowmB581
CmoCh02G005730Csa2G292200Cucumber (Chinese Long) v2cmocuB571
CmoCh02G005730MELO3C020918Melon (DHL92) v3.5.1cmomeB544
CmoCh02G005730ClCG02G013070Watermelon (Charleston Gray)cmowcgB532
CmoCh02G005730CSPI02G14600Wild cucumber (PI 183967)cmocpiB576
CmoCh02G005730Lsi10G005950Bottle gourd (USVL1VR-Ls)cmolsiB530
CmoCh02G005730Cp4.1LG05g11160Cucurbita pepo (Zucchini)cmocpeB595
CmoCh02G005730MELO3C020918.2Melon (DHL92) v3.6.1cmomedB622
CmoCh02G005730CsaV3_2G017150Cucumber (Chinese Long) v3cmocucB0682
CmoCh02G005730Cla97C02G038740Watermelon (97103) v2cmowmbB594
CmoCh02G005730Bhi10G001801Wax gourdcmowgoB0741
CmoCh02G005730CsGy2G014610Cucumber (Gy14) v2cgybcmoB217
CmoCh02G005730Carg11639Silver-seed gourdcarcmoB1422
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G005730Cucumber (Chinese Long) v3cmocucB0685
CmoCh02G005730Cucumber (Chinese Long) v3cmocucB0692
CmoCh02G005730Watermelon (97103) v2cmowmbB610
CmoCh02G005730Wax gourdcmowgoB0753
CmoCh02G005730Cucurbita moschata (Rifu)cmocmoB415
CmoCh02G005730Cucumber (Gy14) v1cgycmoB1018
CmoCh02G005730Cucurbita maxima (Rimu)cmacmoB565
CmoCh02G005730Wild cucumber (PI 183967)cmocpiB586
CmoCh02G005730Cucumber (Chinese Long) v2cmocuB581
CmoCh02G005730Melon (DHL92) v3.5.1cmomeB547
CmoCh02G005730Watermelon (Charleston Gray)cmowcgB547
CmoCh02G005730Watermelon (97103) v1cmowmB596
CmoCh02G005730Cucurbita pepo (Zucchini)cmocpeB548
CmoCh02G005730Cucurbita pepo (Zucchini)cmocpeB573
CmoCh02G005730Bottle gourd (USVL1VR-Ls)cmolsiB538
CmoCh02G005730Cucumber (Gy14) v2cgybcmoB225
CmoCh02G005730Melon (DHL92) v3.6.1cmomedB611
CmoCh02G005730Melon (DHL92) v3.6.1cmomedB625