CmoCh02G003480 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G003480
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr02 : 1749949 .. 1750242 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGACGTTCCAAAAGGCCATGTGGCTGTTTATGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCGGTCATGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGAGGCCTAACAATTCCTTGCAGGGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA

mRNA sequence

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGACGTTCCAAAAGGCCATGTGGCTGTTTATGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCGGTCATGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGAGGCCTAACAATTCCTTGCAGGGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA

Coding sequence (CDS)

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGACGTTCCAAAAGGCCATGTGGCTGTTTATGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCGGTCATGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGAGGCCTAACAATTCCTTGCAGGGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA

Homology

[Close]

BLAST of CmoCh02G003480 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.0e-23
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVD 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of CmoCh02G003480 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.6e-23
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 1


Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LL  +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh02G003480 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.6e-23
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1


Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003480 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-22
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 12 AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGF 71
          AK+IL   ++        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL  +EEEFGF
Sbjct: 10 AKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCREDAFVDLTSRLQ 96
           HP GGLTIPC ED F+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of CmoCh02G003480 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-22
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1


Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL  +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003480 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.7e-44
Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MG RLLSLVPHAKQILKMQS FTKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQ+
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL HAEEEFGFHHP GGLTIPC+EDAFVDLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh02G003480 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.0e-43
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILK+QS  TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF++
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPC+EDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmoCh02G003480 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-42
Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVP+ KQILK+QS F K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL H+EEEFGFHHPQG LTIPC+EDAF+DLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of CmoCh02G003480 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.4e-42
Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MG+ LL LVPHAK+ILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVP+SYLN PSFQ+
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL  AEEEFGFHHP GGLTIPC+EDAFVDLTSRL+V+
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CmoCh02G003480 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.4e-40
Identity = 83/97 (85.57%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIR LSLVPH KQILKMQS  TK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SFQ+
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL +AEEEFGFHHPQGGLTIPC+EDAFVDLTS+LQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CmoCh02G003480 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.9 bits (302), Expect = 4.2e-28
Identity = 58/98 (59.18%), Postives = 74/98 (75.51%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEI-QRKRFVVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK   S + N + +PKGH+AVYVGE+ Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLK-SLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 KLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          KLL  AEEEFGF HP GGLTIPC E  F+DL SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmoCh02G003480 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 2.7e-27
Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + SS + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmoCh02G003480 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 2.7e-27
Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVGE---IQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDL-TSRLQ 96
           +LNHPSF++ L  AEEEFGF+HP GGLTIPCRE+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CmoCh02G003480 vs. TAIR10
Match: AT4G34790.1 (AT4G34790.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25
Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVV 60
           MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQV 97
           PISYLNHP F++ L  AEEE GFHH  GGLTIPCRE++F+ L +  Q+
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of CmoCh02G003480 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 7.5e-25
Identity = 62/92 (67.39%), Postives = 67/92 (72.83%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQ--RKRFVVPISYLNHPSF 60
          M IRL S V ++KQ  K QS        VPKGHVAVYVGE    +KRFVVPISYLNHPSF
Sbjct: 1  MAIRL-SRVINSKQSQKQQSR-------VPKGHVAVYVGEEMESKKRFVVPISYLNHPSF 60

Query: 61 QKLLGHAEEEFGFHHPQGGLTIPCREDAFVDL 91
          Q LL  AEEEFGF+HP GGLTIPCRE+ FV L
Sbjct: 61 QGLLSRAEEEFGFNHPIGGLTIPCREETFVGL 84

[Close]

BLAST of CmoCh02G003480 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-44
Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQ+LKMQS FTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL +AEEEFGFHHPQGGLTIPC+ED F+DLTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of CmoCh02G003480 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 6.8e-44
Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MG RLLSLVPHAKQILKMQS FTKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQ+
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL HAEEEFGFHHP GGLTIPC+EDAFVDLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh02G003480 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 5.7e-43
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILK+QS  TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF++
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPC+EDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmoCh02G003480 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 5.7e-43
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILKMQS FTKN+L+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL  AEEEFGFHHP GGLTIPC+EDAFVDLTSRLQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh02G003480 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-42
Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVP+ KQILK+QS F K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL H+EEEFGFHHPQG LTIPC+EDAF+DLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

The following BLAST results are available for this feature:

BLAST of CmoCh02G003480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	5.0e-23	71.21	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	6.6e-23	63.29	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	6.6e-23	62.03	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU21_ARATH	1.9e-22	59.52	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU19_ARATH	2.5e-22	62.03	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of CmoCh02G003480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI0_CUCSA	4.7e-44	90.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	4.0e-43	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	1.2e-42	85.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	4.4e-42	86.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	5.4e-40	85.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]

BLAST of CmoCh02G003480 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	4.2e-28	59.18	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	2.7e-27	59.79	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	2.7e-27	58.10	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	1.5e-25	55.56	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	7.5e-25	67.39	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh02G003480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115596\|ref\|XP_008457635.1\|	1.8e-44	90.72	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	6.8e-44	90.72	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|778674175\|ref\|XP_011650154.1\|	5.7e-43	87.63	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	5.7e-43	89.69	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206761\|gb\|KGN61880.1\|	1.7e-42	85.57	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G003480.1	CmoCh02G003480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 7.9
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 6.2
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G003480	Cucsa.382020	Cucumber (Gy14) v1	cgycmoB1053
CmoCh02G003480	CmaCh20G007850	Cucurbita maxima (Rimu)	cmacmoB554
CmoCh02G003480	Csa7G009050	Cucumber (Chinese Long) v2	cmocuB633
CmoCh02G003480	MELO3C020761	Melon (DHL92) v3.5.1	cmomeB527

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G003480	Wax gourd	cmowgoB0736
CmoCh02G003480	Cucurbita moschata (Rifu)	cmocmoB388
CmoCh02G003480	Cucurbita moschata (Rifu)	cmocmoB404
CmoCh02G003480	Cucurbita moschata (Rifu)	cmocmoB416
CmoCh02G003480	Cucumber (Gy14) v1	cgycmoB0483
CmoCh02G003480	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G003480	Wild cucumber (PI 183967)	cmocpiB582
CmoCh02G003480	Wild cucumber (PI 183967)	cmocpiB644
CmoCh02G003480	Cucumber (Chinese Long) v2	cmocuB577
CmoCh02G003480	Melon (DHL92) v3.5.1	cmomeB552
CmoCh02G003480	Watermelon (Charleston Gray)	cmowcgB515
CmoCh02G003480	Watermelon (Charleston Gray)	cmowcgB530
CmoCh02G003480	Watermelon (97103) v1	cmowmB580
CmoCh02G003480	Watermelon (97103) v1	cmowmB603
CmoCh02G003480	Cucurbita pepo (Zucchini)	cmocpeB575
CmoCh02G003480	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G003480	Bottle gourd (USVL1VR-Ls)	cmolsiB533
CmoCh02G003480	Cucumber (Gy14) v2	cgybcmoB220
CmoCh02G003480	Cucumber (Gy14) v2	cgybcmoB944
CmoCh02G003480	Melon (DHL92) v3.6.1	cmomedB606
CmoCh02G003480	Silver-seed gourd	carcmoB0436
CmoCh02G003480	Cucumber (Chinese Long) v3	cmocucB0687
CmoCh02G003480	Watermelon (97103) v2	cmowmbB587