CmoCh01G021100 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G021100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	TMV response-related protein
Location	Cmo_Chr01 : 14596135 .. 14596713 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCCTGTTTATCCGACTGCCTCAATCATCCCAAACCCTCTTCTGTTTCTCCACCTCCTCCCACCGCCAAAGTGATCTCTTTGCAAGGCCATCTCCGCGAATACCCTGTTCCCATCTCCGTCTCCCGCGTTCTCCAGACCGAAAACTCCTCTTCTTCACTTTCCGACTCCTTTCTTTGCAACTCCGACCGCTTATACTACGATGACTTCATCCCCCCTTTGCCTCTCGATGAACAGCTTCTCCCTAATCAGATCTATTTCCTCCTTCCTTCCTCCAACCTCCACCATCGATTGAGCGCCTCCCAAATGGCTGCCTTGGCTGTCAAAGCCAGCCTCGCCCTCCAAAATGCCTCCCCCAACGATCGCCGTAAAAAGGGTCGTGTTTCTCCCCTCCTCAACCTCTCGGATTCCGACCACATCATCTCCAAGGAGCCCTCCAAAAAGAACGCCGCCGCGGATACCTCTGCCTCACCCTCCGTTAGAAAATTGCAGAGATTGACGTCGAAAAGAGCAAAAATGGCTGTTCGTTCCTTTAAACTCAAATTGAGCACCATCTATGAAGGCGCCGTTCTGTAG

mRNA sequence

ATGGGTGCCTGTTTATCCGACTGCCTCAATCATCCCAAACCCTCTTCTGTTTCTCCACCTCCTCCCACCGCCAAAGTGATCTCTTTGCAAGGCCATCTCCGCGAATACCCTGTTCCCATCTCCGTCTCCCGCGTTCTCCAGACCGAAAACTCCTCTTCTTCACTTTCCGACTCCTTTCTTTGCAACTCCGACCGCTTATACTACGATGACTTCATCCCCCCTTTGCCTCTCGATGAACAGCTTCTCCCTAATCAGATCTATTTCCTCCTTCCTTCCTCCAACCTCCACCATCGATTGAGCGCCTCCCAAATGGCTGCCTTGGCTGTCAAAGCCAGCCTCGCCCTCCAAAATGCCTCCCCCAACGATCGCCGTAAAAAGGGTCGTGTTTCTCCCCTCCTCAACCTCTCGGATTCCGACCACATCATCTCCAAGGAGCCCTCCAAAAAGAACGCCGCCGCGGATACCTCTGCCTCACCCTCCGTTAGAAAATTGCAGAGATTGACGTCGAAAAGAGCAAAAATGGCTGTTCGTTCCTTTAAACTCAAATTGAGCACCATCTATGAAGGCGCCGTTCTGTAG

Coding sequence (CDS)

ATGGGTGCCTGTTTATCCGACTGCCTCAATCATCCCAAACCCTCTTCTGTTTCTCCACCTCCTCCCACCGCCAAAGTGATCTCTTTGCAAGGCCATCTCCGCGAATACCCTGTTCCCATCTCCGTCTCCCGCGTTCTCCAGACCGAAAACTCCTCTTCTTCACTTTCCGACTCCTTTCTTTGCAACTCCGACCGCTTATACTACGATGACTTCATCCCCCCTTTGCCTCTCGATGAACAGCTTCTCCCTAATCAGATCTATTTCCTCCTTCCTTCCTCCAACCTCCACCATCGATTGAGCGCCTCCCAAATGGCTGCCTTGGCTGTCAAAGCCAGCCTCGCCCTCCAAAATGCCTCCCCCAACGATCGCCGTAAAAAGGGTCGTGTTTCTCCCCTCCTCAACCTCTCGGATTCCGACCACATCATCTCCAAGGAGCCCTCCAAAAAGAACGCCGCCGCGGATACCTCTGCCTCACCCTCCGTTAGAAAATTGCAGAGATTGACGTCGAAAAGAGCAAAAATGGCTGTTCGTTCCTTTAAACTCAAATTGAGCACCATCTATGAAGGCGCCGTTCTGTAG

Homology

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BLAST of CmoCh01G021100 vs. TrEMBL
Match: A0A0A0L5Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G665120 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 5.8e-62
Identity = 141/209 (67.46%), Postives = 161/209 (77.03%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSV--SPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDS 60
           MG C S+CL  PK SS    PPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSS SDS
Sbjct: 1   MGGCFSNCLIIPKVSSSVPPPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSTSDS 60

Query: 61  FLCNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQNA 120
           FLCNSDRL+YDDFIP LPLD QL PNQIYF+LPSSNLHHRL+A  MAALAVKA+LALQNA
Sbjct: 61  FLCNSDRLFYDDFIPSLPLDHQLHPNQIYFILPSSNLHHRLTAPDMAALAVKATLALQNA 120

Query: 121 S------PNDRRKKGRVSPLLNLS---------DSDHIISKEPSKKNAAADTSASPSVRK 180
           S      P+++ ++ R+SPL +L          + +H +S   + KN     + S SV+K
Sbjct: 121 STNNLHLPHNKGRRRRISPLFDLDSPNDQQNEHEHEHALSTNSNSKN----NTTSSSVKK 180

Query: 181 LQRLTSKRAKMAVRSFKLKLSTIYEGAVL 193
           LQRLTS+RAKMAVRSFKL+LSTIYEG VL
Sbjct: 181 LQRLTSRRAKMAVRSFKLRLSTIYEGTVL 205

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BLAST of CmoCh01G021100 vs. TrEMBL
Match: A0A061FGL4_THECC (Poly polymerase 1, putative OS=Theobroma cacao GN=TCM_034801 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-42
Identity = 111/207 (53.62%), Postives = 145/207 (70.05%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDS-- 60
           MG C S  LN     S S  PPTA+V+SL G L +Y +P+ VS+VLQ E ++SS S S  
Sbjct: 1   MGTCFS--LNSRTALSESAAPPTAQVVSLNGDLHKYNIPVLVSQVLQAEAAASSSSSSSL 60

Query: 61  -----FLCNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASL 120
                FLCNSDRLYYDD+IP L +D QL  NQIYF+LP+S L  RL++  MAALAVKAS+
Sbjct: 61  PSSAIFLCNSDRLYYDDYIPALDIDHQLQANQIYFVLPNSKLQQRLTSKDMAALAVKASV 120

Query: 121 ALQNASPND--RRKKGRVSPLLNLSDSDHIISKE--PSKKNAAAD----TSASPSVRKLQ 180
           A+QN+S N+  RRKK R+SP+L ++ S  ++ K+  P+   + A+     S S S+RKL 
Sbjct: 121 AIQNSSKNESHRRKKARISPVLLVAQSLPVVDKDDAPTAPKSFAEPRPRLSRSASIRKLH 180

Query: 181 RLTSKRAKMAVRSFKLKLSTIYEGAVL 193
           R TS+RAK+AVRSF+L+LSTIYEG+VL
Sbjct: 181 RYTSRRAKLAVRSFRLRLSTIYEGSVL 205

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BLAST of CmoCh01G021100 vs. TrEMBL
Match: M5WZG0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020532mg PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38
Identity = 113/222 (50.90%), Postives = 141/222 (63.51%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVL---QTENSSSSLSD 60
           MG C+S  +       +    PTAKVIS+ G LREYPVP+ VS+VL   QT +SSSS S 
Sbjct: 1   MGGCVSSVIRSSHNEELLLNSPTAKVISINGSLREYPVPVIVSQVLEAGQTASSSSSSSS 60

Query: 61  SFLCNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQN 120
           SFLCNSDRLYYD++IP L  +++L  +QIYF+LP S L HRLSA+ MAALAV+ASLA Q+
Sbjct: 61  SFLCNSDRLYYDNYIPVLDSEDELEADQIYFILPRSKLEHRLSATDMAALAVRASLAFQD 120

Query: 121 AS----------------PNDRRKKGRVSP-LLNLSDSD-------HIISKEPSKKNAAA 180
           AS                P    KK RVSP L+N ++SD        I   + + K   +
Sbjct: 121 ASSSSSSYKTKEKKKDLHPRRNYKKARVSPVLINYANSDMDRDDFNEITIGDSAYKGQMS 180

Query: 181 ---DTSASPSVRKLQRLTSKRAKMAVRSFKLKLSTIYEGAVL 193
                S S SV+KLQR TSKRAKMAVRSF+L+L+TI EG+VL
Sbjct: 181 QKQQISRSKSVKKLQRYTSKRAKMAVRSFRLRLTTIDEGSVL 222

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BLAST of CmoCh01G021100 vs. TrEMBL
Match: A5B850_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044257 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-37
Identity = 102/198 (51.52%), Postives = 136/198 (68.69%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDSFL 60
           MG C+S   ++   +S +    TAK+ISL G LREY  P++VS+VL  E+SSSS    F+
Sbjct: 1   MGGCVSSVGSYSNSTSTA----TAKLISLHGELREYSAPVTVSQVLHFESSSSSC---FV 60

Query: 61  CNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQNASP 120
           CNSD LYYDD+IP +  D++LLP QIYFLL +  L +RLSAS+MAALAVKAS+ALQN S 
Sbjct: 61  CNSDSLYYDDYIPAMNADDELLPGQIYFLLSAXKLQYRLSASEMAALAVKASIALQNHSK 120

Query: 121 ---NDRRKKGRVSPLLNLSD---SDHIISKEPSKKNAAADTSASPSVRKLQRLTSKRAKM 180
              + R  K R+SP+L ++       +   + S +  A   S   SVRKLQR +S+RA+M
Sbjct: 121 KAGHRRNNKSRISPVLEVNQKVMEAEVGGVKKSFEKPALGVSRHGSVRKLQRHSSRRARM 180

Query: 181 AVRSFKLKLSTIYEGAVL 193
           AVRSF+L+L+TIYEG+VL
Sbjct: 181 AVRSFRLRLTTIYEGSVL 191

[Close]

BLAST of CmoCh01G021100 vs. TrEMBL
Match: D7UDH7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00300 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.9e-37
Identity = 100/198 (50.51%), Postives = 137/198 (69.19%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDSFL 60
           MG C+S   ++   +S +    TAK+ISL G LREY  P++VS+VL  E+SSSS    F+
Sbjct: 1   MGGCVSSVGSYSNSTSTA----TAKLISLHGELREYSAPVTVSQVLHFESSSSSC---FV 60

Query: 61  CNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQNASP 120
           CNSD LYYDD+IP +  D++LLP QIYFLL ++ L +RL+AS+MAALAVKAS+ALQN S 
Sbjct: 61  CNSDSLYYDDYIPAMNADDELLPGQIYFLLSATKLQYRLTASEMAALAVKASIALQNHSK 120

Query: 121 ---NDRRKKGRVSPLLNLSD---SDHIISKEPSKKNAAADTSASPSVRKLQRLTSKRAKM 180
              + R  K R+SP+L ++       +   + S +  A   S   S+RKLQR +S+RA+M
Sbjct: 121 KAGHRRNNKSRISPVLEVNQKVMEAEVGGVKKSFEKPALGVSRHGSLRKLQRHSSRRARM 180

Query: 181 AVRSFKLKLSTIYEGAVL 193
           AVRSF+L+L+TIYEG+VL
Sbjct: 181 AVRSFRLRLTTIYEGSVL 191

[Close]

BLAST of CmoCh01G021100 vs. TAIR10
Match: AT1G76600.1 (AT1G76600.1 unknown protein)

HSP 1 Score: 158.7 bits (400), Expect = 3.6e-39
Identity = 107/218 (49.08%), Postives = 140/218 (64.22%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDS-- 60
           MG C+S   N    SS      TAK++++ G LREY VP+  S+VL++E++SSS S S  
Sbjct: 1   MGLCVSVNRNEYVSSST-----TAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSS 60

Query: 61  --FLCNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQ 120
             FLCNSD LYYDDFIP +  DE L  NQIYF+LP S   +RLSAS MAALAVKAS+A++
Sbjct: 61  SYFLCNSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIE 120

Query: 121 NAS--PNDRRKKGRVSPLLNLSD-SDHIIS------------------KEPSKKNAAADT 180
            A+   N RR+ GR+SP++ L+  +D+ I+                  K P++     DT
Sbjct: 121 KAAGKKNRRRRSGRISPVVTLNQANDNRIAAVNNRIGGEATNMMMQKGKLPNRTTPFKDT 180

Query: 181 ---SASPSVRKLQRLTSKRAKMAVRSFKLKLSTIYEGA 191
              S S SVRKL+R TS RAK+AVRSF+L+LSTIYEG+
Sbjct: 181 NGYSRSGSVRKLKRYTSGRAKLAVRSFRLRLSTIYEGS 213

[Close]

BLAST of CmoCh01G021100 vs. TAIR10
Match: AT1G21010.1 (AT1G21010.1 unknown protein)

HSP 1 Score: 148.3 bits (373), Expect = 4.9e-36
Identity = 93/195 (47.69%), Postives = 128/195 (65.64%), Query Frame = 1


Query: 22  PTAKVISLQGHLREYPVPISVSRVLQTEN-------SSSSLSDSFLCNSDRLYYDDFIPP 81
           PT K++++ G LREY VP+  S+VL+ E+       SSS  S  F+C+SD LYYDDFIP 
Sbjct: 16  PTVKIVTVNGDLREYNVPVIASQVLEAESAAAYSSSSSSRPSSYFICDSDSLYYDDFIPA 75

Query: 82  LPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQNASPND--RRKKGRVSPL 141
           +  +E L  +QIYF+LP S    RL+AS MAALAVKAS+A+QN+   +  RRKK R+SP+
Sbjct: 76  IKSEEPLQADQIYFVLPISKRQSRLTASDMAALAVKASVAIQNSVKKESRRRKKVRISPV 135

Query: 142 LNLSDSDHIISKEPSKK---------------NAAADTSASPSVRKLQRLTSKRAKMAVR 193
           + L+ S+  ++   S+                 A++  + S SVR L+R TSKRAK+AVR
Sbjct: 136 MMLTGSNDSVNGNGSETTVKKGRPFVSKTAPVKASSGINRSGSVRNLRRYTSKRAKLAVR 195

[Close]

BLAST of CmoCh01G021100 vs. TAIR10
Match: AT2G23690.1 (AT2G23690.1 unknown protein)

HSP 1 Score: 74.3 bits (181), Expect = 9.0e-14
Identity = 47/116 (40.52%), Postives = 65/116 (56.03%), Query Frame = 1


Query: 23  TAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDSFLCNSDRLYYDDFIPPLPLDEQLL 82
           TAK+I   G + E+  P+ V  VLQ           F+CNSD + +D+ +  +  DE+  
Sbjct: 14  TAKLILHDGRMMEFTSPVKVGYVLQKNPMC------FICNSDDMDFDNVVSAISADEEFQ 73

Query: 83  PNQIYFLLPSSNLHHRLSASQMAALAVKASLALQNASPNDRRKKGR-----VSPLL 134
             Q+YF LP S+LHH L A +MAALAVKAS AL  +  +  R K R     VSP++
Sbjct: 74  LGQLYFALPLSSLHHSLKAEEMAALAVKASSALMRSGGSCGRDKCRCRRKCVSPVI 123

[Close]

BLAST of CmoCh01G021100 vs. TAIR10
Match: AT3G50800.1 (AT3G50800.1 unknown protein)

HSP 1 Score: 72.8 bits (177), Expect = 2.6e-13
Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDSFL 60
           MGAC S           S    TAK+I   G L+E+  P+ V ++LQ   +S      F+
Sbjct: 1   MGACAS---------RESRRTETAKLILPDGTLQEFSTPVKVWQILQKNPTS------FV 60

Query: 61  CNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLAL 116
           CNSD + +DD +  +P  E L P ++YF+LP + L+H L A +MAALAVKAS AL
Sbjct: 61  CNSDDMDFDDAVLAVPGSEDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSAL 100

[Close]

BLAST of CmoCh01G021100 vs. TAIR10
Match: AT5G66580.1 (AT5G66580.1 unknown protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 47/115 (40.87%), Postives = 67/115 (58.26%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDSFL 60
           MGAC S           S    +AK+I L G L+E+  P+ V ++LQ   +S      F+
Sbjct: 1   MGACAS---------RESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTS------FV 60

Query: 61  CNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLAL 116
           CNSD + +DD +  +  +E+L   Q+YF+LP + L+H L A +MAALAVKAS AL
Sbjct: 61  CNSDEMDFDDAVSAVAGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSAL 100

[Close]

BLAST of CmoCh01G021100 vs. NCBI nr
Match: gi|778697315|ref|XP_011654294.1| (PREDICTED: uncharacterized protein LOC101220453 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 8.3e-62
Identity = 141/209 (67.46%), Postives = 161/209 (77.03%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSV--SPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDS 60
           MG C S+CL  PK SS    PPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSS SDS
Sbjct: 1   MGGCFSNCLIIPKVSSSVPPPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSTSDS 60

Query: 61  FLCNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQNA 120
           FLCNSDRL+YDDFIP LPLD QL PNQIYF+LPSSNLHHRL+A  MAALAVKA+LALQNA
Sbjct: 61  FLCNSDRLFYDDFIPSLPLDHQLHPNQIYFILPSSNLHHRLTAPDMAALAVKATLALQNA 120

Query: 121 S------PNDRRKKGRVSPLLNLS---------DSDHIISKEPSKKNAAADTSASPSVRK 180
           S      P+++ ++ R+SPL +L          + +H +S   + KN     + S SV+K
Sbjct: 121 STNNLHLPHNKGRRRRISPLFDLDSPNDQQNEHEHEHALSTNSNSKN----NTTSSSVKK 180

Query: 181 LQRLTSKRAKMAVRSFKLKLSTIYEGAVL 193
           LQRLTS+RAKMAVRSFKL+LSTIYEG VL
Sbjct: 181 LQRLTSRRAKMAVRSFKLRLSTIYEGTVL 205

[Close]

BLAST of CmoCh01G021100 vs. NCBI nr
Match: gi|659105228|ref|XP_008453039.1| (PREDICTED: uncharacterized protein LOC103493864 [Cucumis melo])

HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61
Identity = 142/212 (66.98%), Postives = 163/212 (76.89%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSV--SPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDS 60
           MG CLS+CL  PK SS    PPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSS SDS
Sbjct: 1   MGGCLSNCLIIPKVSSSVPPPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSTSDS 60

Query: 61  FLCNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQNA 120
           FLCNSDRLY+DDFIP LPLD QL PNQIYF+LPSSNLHHRL+A  MAALAVKA+LALQNA
Sbjct: 61  FLCNSDRLYFDDFIPSLPLDHQLHPNQIYFILPSSNLHHRLTAPDMAALAVKATLALQNA 120

Query: 121 S---------PNDRRKKGRVSPLLNLS---------DSDHIISKEPSKKNAAADTSASPS 180
           S         P ++ ++ R+SPL +L          + +H +S   + KN   +T++S S
Sbjct: 121 STNNLHLSHLPRNKGRRHRISPLFDLDSPNDQQHEHEHEHALSINSNSKN---NTASSSS 180

Query: 181 VRKLQRLTSKRAKMAVRSFKLKLSTIYEGAVL 193
           V+KLQRLTS+RAKMAVRSFKL+LSTIYEG  L
Sbjct: 181 VKKLQRLTSRRAKMAVRSFKLRLSTIYEGTDL 209

[Close]

BLAST of CmoCh01G021100 vs. NCBI nr
Match: gi|590597514|ref|XP_007018632.1| (Poly polymerase 1, putative [Theobroma cacao])

HSP 1 Score: 181.0 bits (458), Expect = 1.9e-42
Identity = 111/207 (53.62%), Postives = 145/207 (70.05%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDS-- 60
           MG C S  LN     S S  PPTA+V+SL G L +Y +P+ VS+VLQ E ++SS S S  
Sbjct: 1   MGTCFS--LNSRTALSESAAPPTAQVVSLNGDLHKYNIPVLVSQVLQAEAAASSSSSSSL 60

Query: 61  -----FLCNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASL 120
                FLCNSDRLYYDD+IP L +D QL  NQIYF+LP+S L  RL++  MAALAVKAS+
Sbjct: 61  PSSAIFLCNSDRLYYDDYIPALDIDHQLQANQIYFVLPNSKLQQRLTSKDMAALAVKASV 120

Query: 121 ALQNASPND--RRKKGRVSPLLNLSDSDHIISKE--PSKKNAAAD----TSASPSVRKLQ 180
           A+QN+S N+  RRKK R+SP+L ++ S  ++ K+  P+   + A+     S S S+RKL 
Sbjct: 121 AIQNSSKNESHRRKKARISPVLLVAQSLPVVDKDDAPTAPKSFAEPRPRLSRSASIRKLH 180

Query: 181 RLTSKRAKMAVRSFKLKLSTIYEGAVL 193
           R TS+RAK+AVRSF+L+LSTIYEG+VL
Sbjct: 181 RYTSRRAKLAVRSFRLRLSTIYEGSVL 205

[Close]

BLAST of CmoCh01G021100 vs. NCBI nr
Match: gi|645264861|ref|XP_008237879.1| (PREDICTED: uncharacterized protein LOC103336598 [Prunus mume])

HSP 1 Score: 169.9 bits (429), Expect = 4.5e-39
Identity = 112/224 (50.00%), Postives = 140/224 (62.50%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQ-----TENSSSSL 60
           MG CLS  +       +    PTAKVIS+ G LREYPVP+ VS+VL+     + +SSSS 
Sbjct: 1   MGGCLSSAIRSSHNEELLLSSPTAKVISINGSLREYPVPVIVSQVLEAGQTASSSSSSSS 60

Query: 61  SDSFLCNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLAL 120
           S SF+CNSDRLYYD++IP L  +++L  +QIYF+LP S L HRLSA+ MAALAV+ASLA 
Sbjct: 61  SSSFICNSDRLYYDNYIPVLDSEDELEADQIYFILPRSKLEHRLSATDMAALAVRASLAF 120

Query: 121 QNAS----------------PNDRRKKGRVSP-LLNLSDSDHI----------ISKEPSK 180
           QNAS                P    KK RVSP L+N ++SD            +S    +
Sbjct: 121 QNASSSSSSYKSKEKKKDLHPRRNYKKARVSPVLINYANSDVDGDDFNEITIGVSAYKGQ 180

Query: 181 KNAAADTSASPSVRKLQRLTSKRAKMAVRSFKLKLSTIYEGAVL 193
            +     S S SVRKLQR TSKRAKMAVRSF+L+L+TI EG+VL
Sbjct: 181 MSQKQQISRSKSVRKLQRYTSKRAKMAVRSFRLRLTTIDEGSVL 224

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BLAST of CmoCh01G021100 vs. NCBI nr
Match: gi|595859772|ref|XP_007211011.1| (hypothetical protein PRUPE_ppa020532mg [Prunus persica])

HSP 1 Score: 167.5 bits (423), Expect = 2.2e-38
Identity = 113/222 (50.90%), Postives = 141/222 (63.51%), Query Frame = 1


Query: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVL---QTENSSSSLSD 60
           MG C+S  +       +    PTAKVIS+ G LREYPVP+ VS+VL   QT +SSSS S 
Sbjct: 1   MGGCVSSVIRSSHNEELLLNSPTAKVISINGSLREYPVPVIVSQVLEAGQTASSSSSSSS 60

Query: 61  SFLCNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQN 120
           SFLCNSDRLYYD++IP L  +++L  +QIYF+LP S L HRLSA+ MAALAV+ASLA Q+
Sbjct: 61  SFLCNSDRLYYDNYIPVLDSEDELEADQIYFILPRSKLEHRLSATDMAALAVRASLAFQD 120

Query: 121 AS----------------PNDRRKKGRVSP-LLNLSDSD-------HIISKEPSKKNAAA 180
           AS                P    KK RVSP L+N ++SD        I   + + K   +
Sbjct: 121 ASSSSSSYKTKEKKKDLHPRRNYKKARVSPVLINYANSDMDRDDFNEITIGDSAYKGQMS 180

Query: 181 ---DTSASPSVRKLQRLTSKRAKMAVRSFKLKLSTIYEGAVL 193
                S S SV+KLQR TSKRAKMAVRSF+L+L+TI EG+VL
Sbjct: 181 QKQQISRSKSVKKLQRYTSKRAKMAVRSFRLRLTTIDEGSVL 222

The following BLAST results are available for this feature:

BLAST of CmoCh01G021100 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G021100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5Z9_CUCSA	5.8e-62	67.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G665120 PE=4 SV=1	[more]
A0A061FGL4_THECC	1.3e-42	53.62	Poly polymerase 1, putative OS=Theobroma cacao GN=TCM_034801 PE=4 SV=1	[more]
M5WZG0_PRUPE	1.5e-38	50.90	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020532mg PE=4 SV=1	[more]
A5B850_VITVI	1.0e-37	51.52	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044257 PE=4 SV=1	[more]
D7UDH7_VITVI	2.9e-37	50.51	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00300 PE=4 SV=...	[more]

BLAST of CmoCh01G021100 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76600.1	3.6e-39	49.08	unknown protein	[more]
AT1G21010.1	4.9e-36	47.69	unknown protein	[more]
AT2G23690.1	9.0e-14	40.52	unknown protein	[more]
AT3G50800.1	2.6e-13	41.74	unknown protein	[more]
AT5G66580.1	1.3e-12	40.87	unknown protein	[more]

BLAST of CmoCh01G021100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778697315\|ref\|XP_011654294.1\|	8.3e-62	67.46	PREDICTED: uncharacterized protein LOC101220453 [Cucumis sativus]	[more]
gi\|659105228\|ref\|XP_008453039.1\|	1.1e-61	66.98	PREDICTED: uncharacterized protein LOC103493864 [Cucumis melo]	[more]
gi\|590597514\|ref\|XP_007018632.1\|	1.9e-42	53.62	Poly polymerase 1, putative [Theobroma cacao]	[more]
gi\|645264861\|ref\|XP_008237879.1\|	4.5e-39	50.00	PREDICTED: uncharacterized protein LOC103336598 [Prunus mume]	[more]
gi\|595859772\|ref\|XP_007211011.1\|	2.2e-38	50.90	hypothetical protein PRUPE_ppa020532mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G021100.1	CmoCh01G021100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..188 score: 2.1
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 2..192 score: 5.6
None	No IPR available	PANTHER	PTHR33052:SF15	SUBFAMILY NOT NAMED	coord: 2..192 score: 5.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G021100	Cucsa.272560	Cucumber (Gy14) v1	cgycmoB0746
CmoCh01G021100	Csa4G665120	Cucumber (Chinese Long) v2	cmocuB452
CmoCh01G021100	MELO3C017072	Melon (DHL92) v3.5.1	cmomeB434
CmoCh01G021100	ClCG11G019190	Watermelon (Charleston Gray)	cmowcgB388
CmoCh01G021100	CSPI04G27400	Wild cucumber (PI 183967)	cmocpiB456
CmoCh01G021100	Lsi04G024390	Bottle gourd (USVL1VR-Ls)	cmolsiB418
CmoCh01G021100	Cp4.1LG02g08650	Cucurbita pepo (Zucchini)	cmocpeB450
CmoCh01G021100	MELO3C017072.2	Melon (DHL92) v3.6.1	cmomedB498
CmoCh01G021100	CsaV3_4G037790	Cucumber (Chinese Long) v3	cmocucB0540
CmoCh01G021100	Cla97C11G225330	Watermelon (97103) v2	cmowmbB429
CmoCh01G021100	Bhi09G002327	Wax gourd	cmowgoB0613
CmoCh01G021100	CsGy4G025710	Cucumber (Gy14) v2	cgybcmoB474
CmoCh01G021100	Carg21337	Silver-seed gourd	carcmoB0486

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G021100	Silver-seed gourd	carcmoB0146
CmoCh01G021100	Wax gourd	cmowgoB0618
CmoCh01G021100	Cucurbita moschata (Rifu)	cmocmoB017
CmoCh01G021100	Cucurbita maxima (Rimu)	cmacmoB047
CmoCh01G021100	Cucurbita maxima (Rimu)	cmacmoB469