CmoCh01G017800 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G017800
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionNucleic acid binding protein, putative isoform 1
LocationCmo_Chr01 : 13151983 .. 13153591 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTTTTTTTTTTTAAATGATTTTAAGTATTTATTTTGAAAAAAGGAAATGGGTCTTTTTTCTTTATTGTTTTTGTACTGAAAGCTTCTTGGTTTTTAGGCTTTTAGCAGAAGGCAGCAGGAAAGTTTGTTGACAACATTCAAGAGCCAGTGGTACTCTACAAGGTTTTTTCTTTTTGTGTGTTCATATAATCCCACCTGCGGAATTTCACTTATTTTCTGTTCTTCAATTTATTAATATATTTTTCATTATTTTTTGTTATGAATTAGGGTTTCAGTTTAATTTAATGAAGTGAAAGAGGATGATGAAGAAAGGAAATTTAACGGCGGAGGAACATTCGCCGCCACCGCCACCGCCACCGTCGAAGAAGAAGCGAAATCTTCCCGGGAATCCAGGTTTCGTTTTTGTTAAGAATATGAATGAATGATTCGTGTTCGTAGTGAGAGATCTTATGTTCGAACTTTTTATTCGATTTTGAGTCAGACCCAGATGCTGAAGTGATCGCTTTGTCACCAAAAGCGCTTTTGACGACGAATAGATTCGTATGTGAGATTTGCAACAAAGGGTTTCAAAGAGATCAAAATCTTCAACTTCATAGAAGAGGGCATAATCTTCCATGGAAGCTAAAACAAAGAAGCAATAAGGAAGTTAGGAAGAAGGTTTACGTGTGTCCCGAGCTGACTTGCGTGCACCATCACCCGTCGAGGGCTCTCGGTGATCTTACCGGAATCAAGAAGCATTTTTGTCGGAAGCACGGTGAGAAGAAATGGAAGTGTGAAAAATGTTCGAAGAGATATGCTGTTCAATCTGACTGGAAAGCTCACTCCAAGATTTGTGGTACTCGAGAGTATAGATGTGATTGTGGAACCCTCTTCTCCAGGTAACACGAGAAAACGTTATTAATATCTTATCCACTGAACTATACTGCGTGCCTTCGTTTTATGTCAAGAACATAGACAAAAACACGAGAGACAAAGATTTGTTGTTTTTATGTTTGGATTATTGTTTTTTTTTTTTGTTAGGAGGGACAGTTTCATAACCCATAGAGCCTTTTGCGATGCGTTGGCTCAAGAAAGTACCAATTTTGCATCATCAGCCATGAACAATAGCAACCCAATTCAACCAATTTTCTCAACACTGCGCCAATTCCCACTCAAAACTGAAAACCAAGACCCTTTTTATCCTTCAACTTCCAACATCCTCAATCCCTTTAACCCTAACCATAACCCTAACCCTACTTCGATCGGATTCGGGTTAGCCGGTCCTGGTTCGAGTCTTAATCCAGTGTTTGGTTCTGCATGGGAAATGAACTCTCCAAACATGATGGCTTTTGAAGAACCATCCTTTGAAGAAGCTCTAAATGGGATATTGATGAATAATCGAGCTAATAAAGACGGCGACAAATGCAGCGGCGGTGGCGGTGGCAGTGGCGGTGGCGCGGAGGAGATAACGAGAGATTTATTGGGGTTGAGAGCGTTGGCTCGACAGCCCGATCAACGTATGTTTGAGAATGAGATAGTAAACGACAGTCTGAATTTGGGTTCTTCTTCTTCGATGTTTGGATTGCATTTGAATCATCCAACTCAGACTATGTTTTGGCGTGATTAA

mRNA sequence

TCTTTTTTTTTTTTTAAATGATTTTAAGTATTTATTTTGAAAAAAGGAAATGGGTCTTTTTTCTTTATTGTTTTTGTACTGAAAGCTTCTTGGTTTTTAGGCTTTTAGCAGAAGGCAGCAGGAAAGTTTGTTGACAACATTCAAGAGCCAGTGGTACTCTACAAGGGTTTCAGTTTAATTTAATGAAGTGAAAGAGGATGATGAAGAAAGGAAATTTAACGGCGGAGGAACATTCGCCGCCACCGCCACCGCCACCGTCGAAGAAGAAGCGAAATCTTCCCGGGAATCCAGACCCAGATGCTGAAGTGATCGCTTTGTCACCAAAAGCGCTTTTGACGACGAATAGATTCGTATGTGAGATTTGCAACAAAGGGTTTCAAAGAGATCAAAATCTTCAACTTCATAGAAGAGGGCATAATCTTCCATGGAAGCTAAAACAAAGAAGCAATAAGGAAGTTAGGAAGAAGGTTTACGTGTGTCCCGAGCTGACTTGCGTGCACCATCACCCGTCGAGGGCTCTCGGTGATCTTACCGGAATCAAGAAGCATTTTTGTCGGAAGCACGGTGAGAAGAAATGGAAGTGTGAAAAATGTTCGAAGAGATATGCTGTTCAATCTGACTGGAAAGCTCACTCCAAGATTTGTGGTACTCGAGAGTATAGATGTGATTGTGGAACCCTCTTCTCCAGGAGGGACAGTTTCATAACCCATAGAGCCTTTTGCGATGCGTTGGCTCAAGAAAGTACCAATTTTGCATCATCAGCCATGAACAATAGCAACCCAATTCAACCAATTTTCTCAACACTGCGCCAATTCCCACTCAAAACTGAAAACCAAGACCCTTTTTATCCTTCAACTTCCAACATCCTCAATCCCTTTAACCCTAACCATAACCCTAACCCTACTTCGATCGGATTCGGGTTAGCCGGTCCTGGTTCGAGTCTTAATCCAGTGTTTGGTTCTGCATGGGAAATGAACTCTCCAAACATGATGGCTTTTGAAGAACCATCCTTTGAAGAAGCTCTAAATGGGATATTGATGAATAATCGAGCTAATAAAGACGGCGACAAATGCAGCGGCGGTGGCGGTGGCAGTGGCGGTGGCGCGGAGGAGATAACGAGAGATTTATTGGGGTTGAGAGCGTTGGCTCGACAGCCCGATCAACGTATGTTTGAGAATGAGATAGTAAACGACAGTCTGAATTTGGGTTCTTCTTCTTCGATGTTTGGATTGCATTTGAATCATCCAACTCAGACTATGTTTTGGCGTGATTAA

Coding sequence (CDS)

ATGATGAAGAAAGGAAATTTAACGGCGGAGGAACATTCGCCGCCACCGCCACCGCCACCGTCGAAGAAGAAGCGAAATCTTCCCGGGAATCCAGACCCAGATGCTGAAGTGATCGCTTTGTCACCAAAAGCGCTTTTGACGACGAATAGATTCGTATGTGAGATTTGCAACAAAGGGTTTCAAAGAGATCAAAATCTTCAACTTCATAGAAGAGGGCATAATCTTCCATGGAAGCTAAAACAAAGAAGCAATAAGGAAGTTAGGAAGAAGGTTTACGTGTGTCCCGAGCTGACTTGCGTGCACCATCACCCGTCGAGGGCTCTCGGTGATCTTACCGGAATCAAGAAGCATTTTTGTCGGAAGCACGGTGAGAAGAAATGGAAGTGTGAAAAATGTTCGAAGAGATATGCTGTTCAATCTGACTGGAAAGCTCACTCCAAGATTTGTGGTACTCGAGAGTATAGATGTGATTGTGGAACCCTCTTCTCCAGGAGGGACAGTTTCATAACCCATAGAGCCTTTTGCGATGCGTTGGCTCAAGAAAGTACCAATTTTGCATCATCAGCCATGAACAATAGCAACCCAATTCAACCAATTTTCTCAACACTGCGCCAATTCCCACTCAAAACTGAAAACCAAGACCCTTTTTATCCTTCAACTTCCAACATCCTCAATCCCTTTAACCCTAACCATAACCCTAACCCTACTTCGATCGGATTCGGGTTAGCCGGTCCTGGTTCGAGTCTTAATCCAGTGTTTGGTTCTGCATGGGAAATGAACTCTCCAAACATGATGGCTTTTGAAGAACCATCCTTTGAAGAAGCTCTAAATGGGATATTGATGAATAATCGAGCTAATAAAGACGGCGACAAATGCAGCGGCGGTGGCGGTGGCAGTGGCGGTGGCGCGGAGGAGATAACGAGAGATTTATTGGGGTTGAGAGCGTTGGCTCGACAGCCCGATCAACGTATGTTTGAGAATGAGATAGTAAACGACAGTCTGAATTTGGGTTCTTCTTCTTCGATGTTTGGATTGCATTTGAATCATCCAACTCAGACTATGTTTTGGCGTGATTAA
Homology
[Close]
BLAST of CmoCh01G017800 vs. Swiss-Prot
Match: IDD3_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 5.7e-88
Identity = 176/279 (63.08%), Postives = 199/279 (71.33%), Query Frame = 1 

Query: 18  PPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHNLPW 77
           PP  KKKRNLPGNPDP+AEVIALSPK L+ TNRF+CEIC KGFQRDQNLQLHRRGHNLPW
Sbjct: 37  PPLVKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPW 96

Query: 78  KLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 137
           KLKQR++KEVRK+VYVCPE +CVHHHP+RALGDLTGIKKHFCRKHGEKKWKCEKC+KRYA
Sbjct: 97  KLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYA 156

Query: 138 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQEST---------NFASS 197
           VQSDWKAHSK CGTREYRCDCGT+FSRRDSFITHRAFCDALA+E+          +FA++
Sbjct: 157 VQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARLNAASHLKSFAAT 216

Query: 198 AMNNSN-----------------------PIQPIFSTLRQFPLKTEN---QDPFYP-STS 257
           A +N N                       P QP      QFP+ T N   QD   P ST 
Sbjct: 217 AGSNLNYHYLMGTLIPSPSLPQPPSFPFGPPQPQHHHHHQFPITTNNFDHQDVMKPASTL 276

[Close]
BLAST of CmoCh01G017800 vs. Swiss-Prot
Match: IDD2_ARATH (Protein indeterminate-domain 2 OS=Arabidopsis thaliana GN=IDD2 PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.4e-86
Identity = 149/190 (78.42%), Postives = 167/190 (87.89%), Query Frame = 1 

Query: 6   NLTAEEHSPPPPPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQN 65
           ++++  +  P P    KKKRNLPG PDP++EVIALSPK LL TNRFVCEICNKGFQRDQN
Sbjct: 18  SISSTGNQNPLPNSTGKKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQN 77

Query: 66  LQLHRRGHNLPWKLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEK 125
           LQLHRRGHNLPWKL+Q+SNKEV+KKVYVCPE++CVHH PSRALGDLTGIKKHFCRKHGEK
Sbjct: 78  LQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEK 137

Query: 126 KWKCEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNF 185
           KWKC+KCSK+YAVQSDWKAHSKICGT+EY+CDCGTLFSRRDSFITHRAFCDALA+E+   
Sbjct: 138 KWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEENARS 197

Query: 186 ASSAMNNSNP 196
             S     NP
Sbjct: 198 HHSQSKKQNP 207

[Close]
BLAST of CmoCh01G017800 vs. Swiss-Prot
Match: IDD8_ARATH (Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.5e-85
Identity = 144/165 (87.27%), Postives = 155/165 (93.94%), Query Frame = 1 

Query: 18  PPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHNLPW 77
           PP  KKKRNLPGNPDP+AEVIALSP  L+ TNRF+CE+C KGFQRDQNLQLHRRGHNLPW
Sbjct: 33  PPLVKKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPW 92

Query: 78  KLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 137
           KLKQR++KEVRK+VYVCPE TCVHHH SRALGDLTGIKKHFCRKHGEKKW CEKC+KRYA
Sbjct: 93  KLKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYA 152

Query: 138 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQES 183
           VQSDWKAHSK CGTREYRCDCGT+FSRRDSFITHRAFCDALA+E+
Sbjct: 153 VQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEET 197

[Close]
BLAST of CmoCh01G017800 vs. Swiss-Prot
Match: IDD12_ARATH (Protein indeterminate-domain 12 OS=Arabidopsis thaliana GN=IDD12 PE=2 SV=2)

HSP 1 Score: 317.0 bits (811), Expect = 2.6e-85
Identity = 152/190 (80.00%), Postives = 162/190 (85.26%), Query Frame = 1 

Query: 10  EEHSPPPPPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLH 69
           E H P       KKKR LPGNPDPDAEVIALSPK LL TNRFVCEICNKGFQRDQNLQLH
Sbjct: 48  ETHKP-------KKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLH 107

Query: 70  RRGHNLPWKLKQRSNKEV-RKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWK 129
           RRGHNLPWKLKQ++ KE  +KKVYVCPE  C HHHPSRALGDLTGIKKHFCRKHGEKKWK
Sbjct: 108 RRGHNLPWKLKQKNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWK 167

Query: 130 CEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNF--- 189
           CEKCSK YAVQSDWKAH+KICGTR+YRCDCGTLFSR+D+FITHRAFCDALA+ES      
Sbjct: 168 CEKCSKFYAVQSDWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEESARLHST 227

Query: 190 ASSAMNNSNP 196
           +SS + N NP
Sbjct: 228 SSSNLTNPNP 230

[Close]
BLAST of CmoCh01G017800 vs. Swiss-Prot
Match: IDD1_ARATH (Protein indeterminate-domain 1 OS=Arabidopsis thaliana GN=IDD1 PE=1 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.6e-85
Identity = 157/213 (73.71%), Postives = 172/213 (80.75%), Query Frame = 1 

Query: 17  PPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHNLP 76
           P    KKKRNLPG PDPDAEVIALSPK L+ TNRFVCEICNKGFQRDQNLQLHRRGHNLP
Sbjct: 27  PKSVGKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLP 86

Query: 77  WKLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRY 136
           WKL+QRS KEVRKKVYVCP   CVHH PSRALGDLTGIKKHFCRKHGEKKWKCEKCSK+Y
Sbjct: 87  WKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKY 146

Query: 137 AVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFASSAMNNSNPI 196
           AVQSDWKAHSKICGT+EY+CDCGTLFSRRDSFITHRAFCDALA+E      SA N++   
Sbjct: 147 AVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEE------SAKNHTQSK 206

Query: 197 QPIFSTLRQFPLKTENQDPFYPSTSNILNPFNP 230
           +    T+ +   + E + P    +S  L P +P
Sbjct: 207 KLYPETVTRKNPEIEQKSPAAVESSPSLPPSSP 233

[Close]
BLAST of CmoCh01G017800 vs. TrEMBL
Match: A0A0A0L2R7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646130 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 5.3e-117
Identity = 245/371 (66.04%), Postives = 267/371 (71.97%), Query Frame = 1 

Query: 14  PPPPPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGH 73
           P PPPPPSKKKRNLPGNPDP+AEVIALSPK+LL TNRF+CEIC KGFQRDQNLQLHRRGH
Sbjct: 55  PLPPPPPSKKKRNLPGNPDPEAEVIALSPKSLLATNRFICEICKKGFQRDQNLQLHRRGH 114

Query: 74  NLPWKLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCS 133
           NLPWKLKQR NKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCS
Sbjct: 115 NLPWKLKQRGNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCS 174

Query: 134 KRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFASSAMNNS 193
           KRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFC+ALAQESTNF      NS
Sbjct: 175 KRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCNALAQESTNF------NS 234

Query: 194 NPIQPIFSTL---RQFPLKTENQDPFYPSTSNILNPFNPNHNPNPT-SIGFGLAGPGSSL 253
           NP   I S L     FPLK E+QDPF+P       P +  +  NPT SIGFGL  PG   
Sbjct: 235 NPTPKITSHLFPSINFPLKFEHQDPFFPPPPPPPPPPSHQNPNNPTSSIGFGL--PGLGP 294

Query: 254 NPVFGS---AWEMNSPN--------------MMAFEE-PSFEEALNGILM--NNRANKDG 313
             +F S   AWE+N+ N              M+ FEE  SFEEALNGILM  +NR NK+ 
Sbjct: 295 GHLFASSCPAWEVNNNNNNSCSAEIAPFFHHMVGFEEAASFEEALNGILMSNSNRGNKN- 354

Query: 314 DKCSGGGGGSGGGAEEITRDLLGLRALARQPDQRMFEN---EIVNDSLNLGSSSSMFGLH 358
                 GG  GG A EITRD LG     R  D  MF+N   +++N+ ++   S S FG+H
Sbjct: 355 ------GGKGGGAAGEITRDFLG---GLRPVDSSMFQNHDHQMINNDMSNLDSPSTFGVH 406

[Close]
BLAST of CmoCh01G017800 vs. TrEMBL
Match: M1AER7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008205 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 9.1e-93
Identity = 180/287 (62.72%), Postives = 206/287 (71.78%), Query Frame = 1 

Query: 18  PPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHNLPW 77
           PPP+KKKRNLPGNPDP+AEV+ALSP++LL TNRFVCEICNKGFQRDQNLQLHRRGHNLPW
Sbjct: 47  PPPNKKKRNLPGNPDPEAEVVALSPRSLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPW 106

Query: 78  KLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 137
           KLKQR+NKEV+KKVYVCPE +CVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA
Sbjct: 107 KLKQRTNKEVKKKVYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 166

Query: 138 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFASSAMNNSNPIQ 197
           VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDAL +ES+       N+S    
Sbjct: 167 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALTEESSRTIIPPPNSSTSHH 226

Query: 198 PIFSTLRQFPLKTENQDPFYPSTSNILNPFNPNHNPNPTSIGFGLAGPGSSLNPVFGSAW 257
               TL+ F +K E Q     S+   +   NPN N N ++  FG   P  S   +   A 
Sbjct: 227 LNLHTLQNFQMKQEQQQSNDLSSQLFIQ--NPNSNSNSSNNIFGAPPPHMSATALLQKAA 286

Query: 258 EMNSPNMMAFEEPSFEEALNGILMNNRANKDGDKCSGGGGGSGGGAE 305
           ++    + +    +   + N       +       SG G G GGG +
Sbjct: 287 QI---GVTSSSHAANNMSANTFFSPTTSTTTAMAMSGSGAGRGGGGD 328

[Close]
BLAST of CmoCh01G017800 vs. TrEMBL
Match: K4CL86_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 6.5e-91
Identity = 179/283 (63.25%), Postives = 203/283 (71.73%), Query Frame = 1 

Query: 18  PPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHNLPW 77
           PPP+KKKRNLPGNPDP+AEV+ALSP++LL TNRFVCEICNKGFQRDQNLQLHRRGHNLPW
Sbjct: 48  PPPNKKKRNLPGNPDPEAEVVALSPRSLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPW 107

Query: 78  KLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 137
           KLKQRSNKEV+KKVYVCPE +CVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA
Sbjct: 108 KLKQRSNKEVKKKVYVCPEASCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 167

Query: 138 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFASSAMNNSNPIQ 197
           VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDAL +ES+       N+S    
Sbjct: 168 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALTEESSRTIIPPPNSSTSHH 227

Query: 198 PIFSTLRQFPLKTENQDPFYPSTSNILNPFNPNHNPNPTSIGFGLAGPGSSLNPVFGSAW 257
               TL+ F +K E Q      +S +    NPN N   +S  FG   P  S   +   A 
Sbjct: 228 LNLHTLQNFQMKQEQQQQNNDLSSQLFIQ-NPNGN---SSNMFGAPPPHMSATALLQKAA 287

Query: 258 EMNSPNMMAFEEPSFEEALNGILMNNRANKDGDKCSGGGGGSG 301
           ++    + +    +   +         +   G   SG G G+G
Sbjct: 288 QI---GVTSSSHTANNMSATTFFSPTTSTTTGIAMSGSGSGAG 323

[Close]
BLAST of CmoCh01G017800 vs. TrEMBL
Match: M5XYL2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004359mg PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.5e-90
Identity = 165/200 (82.50%), Postives = 178/200 (89.00%), Query Frame = 1 

Query: 8   TAEEHSPPPPPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQ 67
           +A +   P  PPP KKKRNLPGNPDPDAEVIALSPK+L+ TNRF+CEICNKGFQR+QNLQ
Sbjct: 36  SANDIQQPQQPPPPKKKRNLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQREQNLQ 95

Query: 68  LHRRGHNLPWKLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKW 127
           LHRRGHNLPWKLKQR+NKEVRKKVY+CPE TCVHH PSRALGDLTGIKKHFCRKHGEKKW
Sbjct: 96  LHRRGHNLPWKLKQRTNKEVRKKVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKW 155

Query: 128 KCEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFAS 187
           KCEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQE  N  S
Sbjct: 156 KCEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQE--NSTS 215

Query: 188 SAMNNSNP--IQPIFSTLRQ 206
           +A  ++ P  I P+ S+L Q
Sbjct: 216 TAARSAMPASINPLLSSLPQ 233

[Close]
BLAST of CmoCh01G017800 vs. TrEMBL
Match: A0A0S3SRW8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G231600 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.9e-90
Identity = 172/261 (65.90%), Postives = 200/261 (76.63%), Query Frame = 1 

Query: 15  PPPPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHN 74
           P  P   KKKRNLPGNPDPDAEVIALSPK LL TNRFVCEICNKGFQRDQNLQLHRRGHN
Sbjct: 37  PQQPQKIKKKRNLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHN 96

Query: 75  LPWKLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSK 134
           LPWKLKQR+NKEV+KK YVCPE +CVHH+PSRALGDLTGIKKH+CRKHGEKKWKCEKCSK
Sbjct: 97  LPWKLKQRNNKEVKKKAYVCPEPSCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCEKCSK 156

Query: 135 RYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFASSAMNNSN 194
            YAVQSDWKAHSK CGTREYRCDCGTLFSR+DSFITHRAFCDALA+ES   +++ +  S 
Sbjct: 157 IYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSANQLATST 216

Query: 195 PIQPIFSTLRQFPLKTENQDPFYPSTSNILNPFNPNHNPN--PTSIGFGLAGPGSSLNPV 254
              P+  +L  FP +  N +    +T+N +NP++PN NP+  PT      +   +   P+
Sbjct: 217 -TNPLVQSLFLFPTQQHNNNNI--NTTNFINPWDPNPNPSNLPTLHNAIKSESHNFHTPI 276

Query: 255 FGSAWEMN---SPNMMAFEEP 271
           F +    N   SP+++    P
Sbjct: 277 FSTTTNNNNISSPSLLLHHPP 294

[Close]
BLAST of CmoCh01G017800 vs. TAIR10
Match: AT1G03840.1 (AT1G03840.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 325.9 bits (834), Expect = 3.2e-89
Identity = 176/279 (63.08%), Postives = 199/279 (71.33%), Query Frame = 1 

Query: 18  PPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHNLPW 77
           PP  KKKRNLPGNPDP+AEVIALSPK L+ TNRF+CEIC KGFQRDQNLQLHRRGHNLPW
Sbjct: 37  PPLVKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPW 96

Query: 78  KLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 137
           KLKQR++KEVRK+VYVCPE +CVHHHP+RALGDLTGIKKHFCRKHGEKKWKCEKC+KRYA
Sbjct: 97  KLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYA 156

Query: 138 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQEST---------NFASS 197
           VQSDWKAHSK CGTREYRCDCGT+FSRRDSFITHRAFCDALA+E+          +FA++
Sbjct: 157 VQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARLNAASHLKSFAAT 216

Query: 198 AMNNSN-----------------------PIQPIFSTLRQFPLKTEN---QDPFYP-STS 257
           A +N N                       P QP      QFP+ T N   QD   P ST 
Sbjct: 217 AGSNLNYHYLMGTLIPSPSLPQPPSFPFGPPQPQHHHHHQFPITTNNFDHQDVMKPASTL 276

[Close]
BLAST of CmoCh01G017800 vs. TAIR10
Match: AT3G50700.1 (AT3G50700.1 indeterminate(ID)-domain 2)

HSP 1 Score: 321.2 bits (822), Expect = 7.9e-88
Identity = 149/190 (78.42%), Postives = 167/190 (87.89%), Query Frame = 1 

Query: 6   NLTAEEHSPPPPPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQN 65
           ++++  +  P P    KKKRNLPG PDP++EVIALSPK LL TNRFVCEICNKGFQRDQN
Sbjct: 18  SISSTGNQNPLPNSTGKKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQN 77

Query: 66  LQLHRRGHNLPWKLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEK 125
           LQLHRRGHNLPWKL+Q+SNKEV+KKVYVCPE++CVHH PSRALGDLTGIKKHFCRKHGEK
Sbjct: 78  LQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEK 137

Query: 126 KWKCEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNF 185
           KWKC+KCSK+YAVQSDWKAHSKICGT+EY+CDCGTLFSRRDSFITHRAFCDALA+E+   
Sbjct: 138 KWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEENARS 197

Query: 186 ASSAMNNSNP 196
             S     NP
Sbjct: 198 HHSQSKKQNP 207

[Close]
BLAST of CmoCh01G017800 vs. TAIR10
Match: AT5G44160.1 (AT5G44160.1 C2H2-like zinc finger protein)

HSP 1 Score: 317.8 bits (813), Expect = 8.7e-87
Identity = 144/165 (87.27%), Postives = 155/165 (93.94%), Query Frame = 1 

Query: 18  PPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHNLPW 77
           PP  KKKRNLPGNPDP+AEVIALSP  L+ TNRF+CE+C KGFQRDQNLQLHRRGHNLPW
Sbjct: 33  PPLVKKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPW 92

Query: 78  KLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 137
           KLKQR++KEVRK+VYVCPE TCVHHH SRALGDLTGIKKHFCRKHGEKKW CEKC+KRYA
Sbjct: 93  KLKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYA 152

Query: 138 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQES 183
           VQSDWKAHSK CGTREYRCDCGT+FSRRDSFITHRAFCDALA+E+
Sbjct: 153 VQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEET 197

[Close]
BLAST of CmoCh01G017800 vs. TAIR10
Match: AT5G66730.1 (AT5G66730.1 C2H2-like zinc finger protein)

HSP 1 Score: 317.0 bits (811), Expect = 1.5e-86
Identity = 157/213 (73.71%), Postives = 172/213 (80.75%), Query Frame = 1 

Query: 17  PPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHNLP 76
           P    KKKRNLPG PDPDAEVIALSPK L+ TNRFVCEICNKGFQRDQNLQLHRRGHNLP
Sbjct: 27  PKSVGKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLP 86

Query: 77  WKLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRY 136
           WKL+QRS KEVRKKVYVCP   CVHH PSRALGDLTGIKKHFCRKHGEKKWKCEKCSK+Y
Sbjct: 87  WKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKY 146

Query: 137 AVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFASSAMNNSNPI 196
           AVQSDWKAHSKICGT+EY+CDCGTLFSRRDSFITHRAFCDALA+E      SA N++   
Sbjct: 147 AVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEE------SAKNHTQSK 206

Query: 197 QPIFSTLRQFPLKTENQDPFYPSTSNILNPFNP 230
           +    T+ +   + E + P    +S  L P +P
Sbjct: 207 KLYPETVTRKNPEIEQKSPAAVESSPSLPPSSP 233

[Close]
BLAST of CmoCh01G017800 vs. TAIR10
Match: AT4G02670.1 (AT4G02670.1 indeterminate(ID)-domain 12)

HSP 1 Score: 317.0 bits (811), Expect = 1.5e-86
Identity = 152/190 (80.00%), Postives = 162/190 (85.26%), Query Frame = 1 

Query: 10  EEHSPPPPPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLH 69
           E H P       KKKR LPGNPDPDAEVIALSPK LL TNRFVCEICNKGFQRDQNLQLH
Sbjct: 48  ETHKP-------KKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLH 107

Query: 70  RRGHNLPWKLKQRSNKEV-RKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWK 129
           RRGHNLPWKLKQ++ KE  +KKVYVCPE  C HHHPSRALGDLTGIKKHFCRKHGEKKWK
Sbjct: 108 RRGHNLPWKLKQKNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWK 167

Query: 130 CEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNF--- 189
           CEKCSK YAVQSDWKAH+KICGTR+YRCDCGTLFSR+D+FITHRAFCDALA+ES      
Sbjct: 168 CEKCSKFYAVQSDWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEESARLHST 227

Query: 190 ASSAMNNSNP 196
           +SS + N NP
Sbjct: 228 SSSNLTNPNP 230

[Close]
BLAST of CmoCh01G017800 vs. NCBI nr
Match: gi|778696624|ref|XP_011654179.1| (PREDICTED: zinc finger protein MAGPIE-like [Cucumis sativus])

HSP 1 Score: 429.1 bits (1102), Expect = 7.6e-117
Identity = 245/371 (66.04%), Postives = 267/371 (71.97%), Query Frame = 1 

Query: 14  PPPPPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGH 73
           P PPPPPSKKKRNLPGNPDP+AEVIALSPK+LL TNRF+CEIC KGFQRDQNLQLHRRGH
Sbjct: 55  PLPPPPPSKKKRNLPGNPDPEAEVIALSPKSLLATNRFICEICKKGFQRDQNLQLHRRGH 114

Query: 74  NLPWKLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCS 133
           NLPWKLKQR NKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCS
Sbjct: 115 NLPWKLKQRGNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCS 174

Query: 134 KRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFASSAMNNS 193
           KRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFC+ALAQESTNF      NS
Sbjct: 175 KRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCNALAQESTNF------NS 234

Query: 194 NPIQPIFSTL---RQFPLKTENQDPFYPSTSNILNPFNPNHNPNPT-SIGFGLAGPGSSL 253
           NP   I S L     FPLK E+QDPF+P       P +  +  NPT SIGFGL  PG   
Sbjct: 235 NPTPKITSHLFPSINFPLKFEHQDPFFPPPPPPPPPPSHQNPNNPTSSIGFGL--PGLGP 294

Query: 254 NPVFGS---AWEMNSPN--------------MMAFEE-PSFEEALNGILM--NNRANKDG 313
             +F S   AWE+N+ N              M+ FEE  SFEEALNGILM  +NR NK+ 
Sbjct: 295 GHLFASSCPAWEVNNNNNNSCSAEIAPFFHHMVGFEEAASFEEALNGILMSNSNRGNKN- 354

Query: 314 DKCSGGGGGSGGGAEEITRDLLGLRALARQPDQRMFEN---EIVNDSLNLGSSSSMFGLH 358
                 GG  GG A EITRD LG     R  D  MF+N   +++N+ ++   S S FG+H
Sbjct: 355 ------GGKGGGAAGEITRDFLG---GLRPVDSSMFQNHDHQMINNDMSNLDSPSTFGVH 406

[Close]
BLAST of CmoCh01G017800 vs. NCBI nr
Match: gi|659103866|ref|XP_008452730.1| (PREDICTED: zinc finger protein MAGPIE-like [Cucumis melo])

HSP 1 Score: 372.1 bits (954), Expect = 1.1e-99
Identity = 180/211 (85.31%), Postives = 190/211 (90.05%), Query Frame = 1 

Query: 15  PPPPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHN 74
           PP PPPSKKKRNLPGNPDP+AEVIALSPK+LL TNRF+CEIC KGFQRDQNLQLHRRGHN
Sbjct: 55  PPLPPPSKKKRNLPGNPDPEAEVIALSPKSLLATNRFICEICKKGFQRDQNLQLHRRGHN 114

Query: 75  LPWKLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSK 134
           LPWKLKQR NKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSK
Sbjct: 115 LPWKLKQRGNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSK 174

Query: 135 RYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFASSAMNNSN 194
           RYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFC+ALAQESTNF      N+N
Sbjct: 175 RYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCNALAQESTNF------NNN 234

Query: 195 PIQPIFSTL---RQFPLKTENQDPFYPSTSN 223
           P   + S L     FPLK E+QDPF+PS+S+
Sbjct: 235 PTPKLTSHLFPSINFPLKFEHQDPFFPSSSS 259

[Close]
BLAST of CmoCh01G017800 vs. NCBI nr
Match: gi|698430542|ref|XP_009793158.1| (PREDICTED: zinc finger protein NUTCRACKER-like [Nicotiana sylvestris])

HSP 1 Score: 350.5 bits (898), Expect = 3.4e-93
Identity = 180/252 (71.43%), Postives = 199/252 (78.97%), Query Frame = 1 

Query: 17  PPPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHNLP 76
           P P +KKKRNLPGNPDP+AEVIALSPK+LL TNRFVCEICNKGFQRDQNLQLHRRGHNLP
Sbjct: 49  PAPANKKKRNLPGNPDPEAEVIALSPKSLLATNRFVCEICNKGFQRDQNLQLHRRGHNLP 108

Query: 77  WKLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRY 136
           WKLKQR+NKEV+KKVYVCPE +CVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRY
Sbjct: 109 WKLKQRTNKEVKKKVYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRY 168

Query: 137 AVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFASSAMNNSNPI 196
           AVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALA+ES    +  +++S+  
Sbjct: 169 AVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAEESVRTTNPLISSSSTS 228

Query: 197 QPI-FSTLRQFPLKTENQDPFYPSTSNILNPFNPNHNPNPTSIGFGLAGP-GSSLNPVFG 256
             +   TL+ F LK E Q     S  N+L    P H  N  S    +  P  SS N +FG
Sbjct: 229 HHLNLHTLQNFQLKQEQQQQL--SNFNLL----PPHPSNELSSQLFIHNPTSSSSNNIFG 288

Query: 257 SAWEMNSPNMMA 267
           +A    S +M A
Sbjct: 289 AAAAATSAHMSA 294

[Close]
BLAST of CmoCh01G017800 vs. NCBI nr
Match: gi|970048431|ref|XP_015085741.1| (PREDICTED: protein indeterminate-domain 12-like [Solanum pennellii])

HSP 1 Score: 349.4 bits (895), Expect = 7.6e-93
Identity = 187/294 (63.61%), Postives = 208/294 (70.75%), Query Frame = 1 

Query: 18  PPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHNLPW 77
           PPP+KKKRNLPGNPDP+AEV+ALSP++LL TNRFVCEICNKGFQRDQNLQLHRRGHNLPW
Sbjct: 48  PPPNKKKRNLPGNPDPEAEVVALSPRSLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPW 107

Query: 78  KLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 137
           KLKQRSNKEV+KKVYVCPE +CVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA
Sbjct: 108 KLKQRSNKEVKKKVYVCPEASCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 167

Query: 138 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFASSAMNNSNPIQ 197
           VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDAL +ES+       N+S    
Sbjct: 168 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALTEESSRTIIPPPNSSTSHH 227

Query: 198 PIFSTLRQFPLKTENQDPFYPSTSNILNPFNPNHNPNPTSIGFGLAGPGSSLNP------ 257
               TL+ F +K E Q     S       F  N N N +++ FG   P  S         
Sbjct: 228 LNLHTLQNFQMKQEQQQQQQQSNDLSSQLFIQNPNSNSSNM-FGALPPHMSATALLQKAA 287

Query: 258 ---VFGSAWEMNSPNMMAFEEPSFEEALNGILMNNRANKDGDKCSGGGGGSGGG 303
              V  S+   N+ +   F  P+   A +GI M           SG G G+GGG
Sbjct: 288 QIGVTSSSHTANNMSATTFFSPTTSTA-SGIAM-----------SGSGSGAGGG 328

[Close]
BLAST of CmoCh01G017800 vs. NCBI nr
Match: gi|565369908|ref|XP_006351575.1| (PREDICTED: protein indeterminate-domain 12-like [Solanum tuberosum])

HSP 1 Score: 348.6 bits (893), Expect = 1.3e-92
Identity = 180/287 (62.72%), Postives = 206/287 (71.78%), Query Frame = 1 

Query: 18  PPPSKKKRNLPGNPDPDAEVIALSPKALLTTNRFVCEICNKGFQRDQNLQLHRRGHNLPW 77
           PPP+KKKRNLPGNPDP+AEV+ALSP++LL TNRFVCEICNKGFQRDQNLQLHRRGHNLPW
Sbjct: 47  PPPNKKKRNLPGNPDPEAEVVALSPRSLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPW 106

Query: 78  KLKQRSNKEVRKKVYVCPELTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 137
           KLKQR+NKEV+KKVYVCPE +CVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA
Sbjct: 107 KLKQRTNKEVKKKVYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYA 166

Query: 138 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESTNFASSAMNNSNPIQ 197
           VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDAL +ES+       N+S    
Sbjct: 167 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALTEESSRTIIPPPNSSTSHH 226

Query: 198 PIFSTLRQFPLKTENQDPFYPSTSNILNPFNPNHNPNPTSIGFGLAGPGSSLNPVFGSAW 257
               TL+ F +K E Q     S+   +   NPN N N ++  FG   P  S   +   A 
Sbjct: 227 LNLHTLQNFQMKQEQQQSNDLSSQLFIQ--NPNSNSNSSNNIFGAPPPHMSATALLQKAA 286

Query: 258 EMNSPNMMAFEEPSFEEALNGILMNNRANKDGDKCSGGGGGSGGGAE 305
           ++    + +    +   + N       +       SG G G GGG +
Sbjct: 287 QI---GVTSSSHAANNMSANTFFSPTTSTTTAMAMSGSGAGRGGGGD 328

The following BLAST results are available for this feature:
BLAST of CmoCh01G017800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IDD3_ARATH5.7e-8863.08Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1[more]
IDD2_ARATH1.4e-8678.42Protein indeterminate-domain 2 OS=Arabidopsis thaliana GN=IDD2 PE=2 SV=1[more]
IDD8_ARATH1.5e-8587.27Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1[more]
IDD12_ARATH2.6e-8580.00Protein indeterminate-domain 12 OS=Arabidopsis thaliana GN=IDD12 PE=2 SV=2[more]
IDD1_ARATH2.6e-8573.71Protein indeterminate-domain 1 OS=Arabidopsis thaliana GN=IDD1 PE=1 SV=1[more]
BLAST of CmoCh01G017800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2R7_CUCSA5.3e-11766.04Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646130 PE=4 SV=1[more]
M1AER7_SOLTU9.1e-9362.72Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008205 PE=4 SV=1[more]
K4CL86_SOLLC6.5e-9163.25Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
M5XYL2_PRUPE1.5e-9082.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004359mg PE=4 SV=1[more]
A0A0S3SRW8_PHAAN1.9e-9065.90Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G231600 PE=... [more]
BLAST of CmoCh01G017800 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G03840.13.2e-8963.08 C2H2 and C2HC zinc fingers superfamily protein[more]
AT3G50700.17.9e-8878.42 indeterminate(ID)-domain 2[more]
AT5G44160.18.7e-8787.27 C2H2-like zinc finger protein[more]
AT5G66730.11.5e-8673.71 C2H2-like zinc finger protein[more]
AT4G02670.11.5e-8680.00 indeterminate(ID)-domain 12[more]
BLAST of CmoCh01G017800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778696624|ref|XP_011654179.1|7.6e-11766.04PREDICTED: zinc finger protein MAGPIE-like [Cucumis sativus][more]
gi|659103866|ref|XP_008452730.1|1.1e-9985.31PREDICTED: zinc finger protein MAGPIE-like [Cucumis melo][more]
gi|698430542|ref|XP_009793158.1|3.4e-9371.43PREDICTED: zinc finger protein NUTCRACKER-like [Nicotiana sylvestris][more]
gi|970048431|ref|XP_015085741.1|7.6e-9363.61PREDICTED: protein indeterminate-domain 12-like [Solanum pennellii][more]
gi|565369908|ref|XP_006351575.1|1.3e-9262.72PREDICTED: protein indeterminate-domain 12-like [Solanum tuberosum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
IPR013087Znf_C2H2_type
IPR015880Zinc finger, C2H2-like
IPR022755Znf_C2H2_jaz
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G017800.1CmoCh01G017800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 53..73
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 51..73
score: 10
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 50..73
score: 1.1E-5coord: 115..148
score: 1.
IPR015880Zinc finger, C2H2-likeSMARTSM00355c2h2final6coord: 51..73
score: 0.017coord: 127..147
score: 1
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 51..73
score: 5.
NoneNo IPR availablePANTHERPTHR10593SERINE/THREONINE-PROTEIN KINASE RIOcoord: 323..350
score: 1.7E-150coord: 17..254
score: 1.7E
NoneNo IPR availablePANTHERPTHR10593:SF25SUBFAMILY NOT NAMEDcoord: 17..254
score: 1.7E-150coord: 323..350
score: 1.7E
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 49..74
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G017800Cucsa.299450Cucumber (Gy14) v1cgycmoB0821
CmoCh01G017800Cla020873Watermelon (97103) v1cmowmB429
CmoCh01G017800Csa4G646130Cucumber (Chinese Long) v2cmocuB453
CmoCh01G017800MELO3C016876Melon (DHL92) v3.5.1cmomeB435
CmoCh01G017800ClCG05G017910Watermelon (Charleston Gray)cmowcgB408
CmoCh01G017800CSPI04G25350Wild cucumber (PI 183967)cmocpiB457
CmoCh01G017800Cp4.1LG02g06010Cucurbita pepo (Zucchini)cmocpeB445
CmoCh01G017800MELO3C024385.2Melon (DHL92) v3.6.1cmomedB455
CmoCh01G017800MELO3C016876.2Melon (DHL92) v3.6.1cmomedB499
CmoCh01G017800CsaV3_4G035690Cucumber (Chinese Long) v3cmocucB0541
CmoCh01G017800Cla97C05G099210Watermelon (97103) v2cmowmbB456
CmoCh01G017800Bhi09G002577Wax gourdcmowgoB0617
CmoCh01G017800Bhi09G000301Wax gourdcmowgoB0629
CmoCh01G017800CsGy7G021060Cucumber (Gy14) v2cgybcmoB926
CmoCh01G017800CsGy4G023650Cucumber (Gy14) v2cgybcmoB475
CmoCh01G017800Carg10693Silver-seed gourdcarcmoB1043
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G017800Cucurbita pepo (Zucchini)cmocpeB462
CmoCh01G017800Bottle gourd (USVL1VR-Ls)cmolsiB422
CmoCh01G017800Cucumber (Gy14) v2cgybcmoB103
CmoCh01G017800Silver-seed gourdcarcmoB0133
CmoCh01G017800Silver-seed gourdcarcmoB0442
CmoCh01G017800Cucurbita moschata (Rifu)cmocmoB014
CmoCh01G017800Cucurbita moschata (Rifu)cmocmoB067
CmoCh01G017800Cucurbita maxima (Rimu)cmacmoB042
CmoCh01G017800Cucurbita maxima (Rimu)cmacmoB470