CmoCh01G017490 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G017490
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DUF1677 family protein
Location	Cmo_Chr01 : 13025640 .. 13026086 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGAAAGTGACGAAGGTGATCGCAAGCATCGAGCAATCGATTCCGGTGACGCAGCACAACGCTCAAGTCATCGACGTGGAGTCGATAAAATGCGAGTGTTGTGGATTGACGGAGGAGTGTACTCCAGCGTACATCGCTCGAGTGTGCGAGAGGTATGAAGGGCGTTGGATTTGTGGACTCTGTGCGGAGGCTGTGAAAGACGAATCTATCAGATCTCTGAGCAAAATCACCACCGGTGAAGCGGTGAAGAGGCACATGAAGTTTCACAAAGCATTCAAATCTTCAATTCCGCCGGTGAATCCGACTGAGGATTTGATTTCAGCTATGAAACAGCTTTTCCGTCGCTCTCTGGACTCTCCAAAAAAAGACGCCTCGCGATCGCTTGGCCGTTCCAATAGCTGTTTCTCCTCCATGCCGAGGCGGCGAAGTCATTACGATTAG

mRNA sequence

ATGGCGGCGAAAGTGACGAAGGTGATCGCAAGCATCGAGCAATCGATTCCGGTGACGCAGCACAACGCTCAAGTCATCGACGTGGAGTCGATAAAATGCGAGTGTTGTGGATTGACGGAGGAGTGTACTCCAGCGTACATCGCTCGAGTGTGCGAGAGGTATGAAGGGCGTTGGATTTGTGGACTCTGTGCGGAGGCTGTGAAAGACGAATCTATCAGATCTCTGAGCAAAATCACCACCGGTGAAGCGGTGAAGAGGCACATGAAGTTTCACAAAGCATTCAAATCTTCAATTCCGCCGGTGAATCCGACTGAGGATTTGATTTCAGCTATGAAACAGCTTTTCCGTCGCTCTCTGGACTCTCCAAAAAAAGACGCCTCGCGATCGCTTGGCCGTTCCAATAGCTGTTTCTCCTCCATGCCGAGGCGGCGAAGTCATTACGATTAG

Coding sequence (CDS)

ATGGCGGCGAAAGTGACGAAGGTGATCGCAAGCATCGAGCAATCGATTCCGGTGACGCAGCACAACGCTCAAGTCATCGACGTGGAGTCGATAAAATGCGAGTGTTGTGGATTGACGGAGGAGTGTACTCCAGCGTACATCGCTCGAGTGTGCGAGAGGTATGAAGGGCGTTGGATTTGTGGACTCTGTGCGGAGGCTGTGAAAGACGAATCTATCAGATCTCTGAGCAAAATCACCACCGGTGAAGCGGTGAAGAGGCACATGAAGTTTCACAAAGCATTCAAATCTTCAATTCCGCCGGTGAATCCGACTGAGGATTTGATTTCAGCTATGAAACAGCTTTTCCGTCGCTCTCTGGACTCTCCAAAAAAAGACGCCTCGCGATCGCTTGGCCGTTCCAATAGCTGTTTCTCCTCCATGCCGAGGCGGCGAAGTCATTACGATTAG

Homology

[Close]

BLAST of CmoCh01G017490 vs. TrEMBL
Match: A0A0A0L0X0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G648590 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-62
Identity = 121/140 (86.43%), Postives = 129/140 (92.14%), Query Frame = 1


Query: 7   KVIASIEQSIPVTQHNAQVIDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEA 66
           KVI+  EQ  PVTQH+ QVIDVES+KCECCGLTEECTPAYI RV ERYEGRWICGLCAEA
Sbjct: 4   KVISGKEQMAPVTQHSGQVIDVESVKCECCGLTEECTPAYIGRVRERYEGRWICGLCAEA 63

Query: 67  VKDESIRSLSKITTGEAVKRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLDSPKKDA 126
           VKDES+RS S ITTGEAVKRHMKFHKAFKSSIPP+NPTEDLISAMKQL RRSLDSPKKD+
Sbjct: 64  VKDESLRSQSNITTGEAVKRHMKFHKAFKSSIPPLNPTEDLISAMKQLLRRSLDSPKKDS 123

Query: 127 SRSLGRSNSCFSSMPRRRSH 147
           SRSLGRSNSCFS++P RRSH
Sbjct: 124 SRSLGRSNSCFSAIPGRRSH 143

[Close]

BLAST of CmoCh01G017490 vs. TrEMBL
Match: A0A061GKL2_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_037408 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.0e-37
Identity = 83/143 (58.04%), Postives = 102/143 (71.33%), Query Frame = 1


Query: 1   MAAKVTKVIASIEQSIPVTQHNAQVIDVESIKCECCGLTEECTPAYIARVCERYEGRWIC 60
           MAA V+K    +E      +H     +VE  +C+CCGLTEECTPAYIA V E++EGRW+C
Sbjct: 1   MAAAVSKDAKKMES----VKHKNLQTEVEFAECDCCGLTEECTPAYIAHVREKFEGRWLC 60

Query: 61  GLCAEAVKDESIRSLSKITTGEAVKRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLD 120
           GLC+EAVKDE++RS   ITT EA+ RH+KF + FKSS PP NP EDLISAMK L RR+LD
Sbjct: 61  GLCSEAVKDETVRSEEDITTNEALDRHLKFCEQFKSSSPPANPAEDLISAMKHLLRRTLD 120

Query: 121 SPKKDA--SRSLGRSNSCFSSMP 142
           SP+K    S S  RS  CFS++P
Sbjct: 121 SPRKSGPPSASFVRSKGCFSTLP 139

[Close]

BLAST of CmoCh01G017490 vs. TrEMBL
Match: A0A0D2U5C1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G221200 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-35
Identity = 83/130 (63.85%), Postives = 97/130 (74.62%), Query Frame = 1


Query: 17  PVTQHNAQVIDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEAVKDESIRSLS 76
           P    N Q I+VE  +C+CCGLTEECTPAYIARV E++EGRW+CGLC+EAVKDE IRS S
Sbjct: 8   PFKNKNNQ-IEVEFAECDCCGLTEECTPAYIARVREKFEGRWLCGLCSEAVKDERIRSSS 67

Query: 77  K---ITTGEAVKRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLDSPKK--DASRSLG 136
               IT  EA+ RHMKF + FKSS PPVNPTEDLI+AM+ L  RSLDSP+K  + S S  
Sbjct: 68  PEDIITINEALVRHMKFCEQFKSSSPPVNPTEDLIAAMRHLILRSLDSPRKNNNGSSSFV 127

Query: 137 RSNSCFSSMP 142
           RS +CFS  P
Sbjct: 128 RSKTCFSRFP 136

[Close]

BLAST of CmoCh01G017490 vs. TrEMBL
Match: A0A0B0MGE7_GOSAR (Arginine--tRNA ligase OS=Gossypium arboreum GN=F383_11988 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-34
Identity = 74/119 (62.18%), Postives = 93/119 (78.15%), Query Frame = 1


Query: 25  VIDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEAVKDESIRSLSKITTGEAV 84
           V+ V+  +C+CCGLTEECT AYIA V E++EGRW+CGLC+EAV DE++RS   ITT EA+
Sbjct: 42  VVIVKLAECDCCGLTEECTQAYIASVREKFEGRWLCGLCSEAVNDETVRSEEDITTNEAM 101

Query: 85  KRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLDSPKKD---ASRSLGRSNSCFSSM 141
            RHMKF + FKSS PP NP EDLISAM+ LFRRSL+SP+K+    S S  RS +CFS++
Sbjct: 102 DRHMKFCEQFKSSSPPANPAEDLISAMRHLFRRSLESPRKNKSSPSTSFSRSKNCFSTL 160

[Close]

BLAST of CmoCh01G017490 vs. TrEMBL
Match: A0A0D2LTL3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G019300 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.0e-34
Identity = 74/119 (62.18%), Postives = 92/119 (77.31%), Query Frame = 1


Query: 25  VIDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEAVKDESIRSLSKITTGEAV 84
           V+ V+  +C+CCGLTEECT AYIA V E++EGRW+CGLC+EAV DE++RS   ITT EA+
Sbjct: 15  VVIVKLAECDCCGLTEECTQAYIASVREKFEGRWLCGLCSEAVNDETVRSEEDITTNEAM 74

Query: 85  KRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLDSPKKD---ASRSLGRSNSCFSSM 141
            RHMKF   FKSS PP NP EDLISAM+ LFRRSL+SP+K+    S S  RS +CFS++
Sbjct: 75  DRHMKFCGQFKSSSPPANPAEDLISAMRHLFRRSLESPRKNKSSPSTSFSRSENCFSTL 133

[Close]

BLAST of CmoCh01G017490 vs. TAIR10
Match: AT1G72510.1 (AT1G72510.1 Protein of unknown function (DUF1677))

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-30
Identity = 71/143 (49.65%), Postives = 91/143 (63.64%), Query Frame = 1


Query: 16  IPVTQHNAQVIDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEAVKDESIRSL 75
           + VTQ +    + +S+ C+CCGLTEECT +YI  V ERY G+WICGLC+EAVK E +R+ 
Sbjct: 24  VSVTQISGD--EPDSVTCDCCGLTEECTQSYIEMVRERYMGKWICGLCSEAVKYEVMRTK 83

Query: 76  SKITTGEAVKRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLDSPK----------KD 135
             +TT EA+ RHM     FKSS PP NPT  LISAM+Q+ R+SLDSP+          KD
Sbjct: 84  RLLTTEEAMARHMNMCNKFKSSSPPPNPTGHLISAMRQILRKSLDSPRMLRSMPNSPSKD 143

Query: 136 --------ASRSLGRSNSCFSSM 141
                    S  L RS+SCF+S+
Sbjct: 144 DQDHHHDCVSNVLSRSDSCFASL 164

[Close]

BLAST of CmoCh01G017490 vs. TAIR10
Match: AT2G09970.1 (AT2G09970.1 Protein of unknown function (DUF1677))

HSP 1 Score: 114.4 bits (285), Expect = 6.0e-26
Identity = 67/148 (45.27%), Postives = 91/148 (61.49%), Query Frame = 1


Query: 12  IEQSIPVTQHNAQVIDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEAVKDES 71
           I  ++PVTQ ++  +D  S+ C+CCGLT+ECT +Y   + ERY G+WI G C+EAVK + 
Sbjct: 20  IISTVPVTQISSDELD--SVTCDCCGLTDECTESYTEMIRERYIGKWISGFCSEAVKYKV 79

Query: 72  IRSLSKITT-GEAVKRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLDSPK------- 131
           +R+   +TT  EA+ RHM     FKSS PP N T  LISAM+Q+ R+SLDSP+       
Sbjct: 80  MRTKRFLTTEEEAMARHMNKCNKFKSSSPPSNLTRHLISAMRQILRKSLDSPRMLRSMPN 139

Query: 132 ---KD--------ASRSLGRSNSCFSSM 141
              KD         S  L RS+SCF+S+
Sbjct: 140 SPSKDDQDNHHDCVSNVLSRSDSCFASL 165

[Close]

BLAST of CmoCh01G017490 vs. TAIR10
Match: AT5G20670.1 (AT5G20670.1 Protein of unknown function (DUF1677))

HSP 1 Score: 112.1 bits (279), Expect = 3.0e-25
Identity = 63/140 (45.00%), Postives = 88/140 (62.86%), Query Frame = 1


Query: 19  TQHNAQVIDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEAVKDESIRSLSKI 78
           T+ ++ +  VES+ C+ CG  EECTPAYI RV ER++G W+CGLCAEAVKDE +RS ++I
Sbjct: 14  TKPSSSLPAVESVTCDTCGFAEECTPAYINRVKERHKGHWLCGLCAEAVKDEVVRSSTRI 73

Query: 79  TTGEAVKRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLD-SPKK------------- 138
           +  EA++RH  F   F+S  P  +  ED IS + ++ RRSLD SP++             
Sbjct: 74  SVEEALRRHTTFCHRFRSWSP--DEEEDPISVIGRILRRSLDGSPRRTNTRTSSSGALPG 133

Query: 139 ----DASRSLGRSNSCFSSM 141
               ++ RSL RS SCF S+
Sbjct: 134 IDGVESRRSLLRSGSCFPSL 151

[Close]

BLAST of CmoCh01G017490 vs. TAIR10
Match: AT4G14819.1 (AT4G14819.1 Protein of unknown function (DUF1677))

HSP 1 Score: 91.3 bits (225), Expect = 5.5e-19
Identity = 49/110 (44.55%), Postives = 66/110 (60.00%), Query Frame = 1


Query: 26  IDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEAVKDESIRSLSKITTGEAVK 85
           +++ES+ CECCGL E+CT  YI++V   + G+W+CGLC+EAV DE  RS SK T  EAV 
Sbjct: 1   MEIESVTCECCGLMEDCTQHYISKVKANFAGKWLCGLCSEAVSDEFSRS-SK-TVEEAVN 60

Query: 86  RHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLDSPKKDASRSLGRSNS 136
            HM F   F +     NP E +   M+Q+ RR         S+  GRSN+
Sbjct: 61  AHMSFCGKFNA-----NPAELVADGMRQMLRRRSGELSPKMSKKFGRSNT 103

[Close]

BLAST of CmoCh01G017490 vs. TAIR10
Match: AT3G22540.1 (AT3G22540.1 Protein of unknown function (DUF1677))

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-18
Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 1


Query: 26  IDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEAVKDESIRSLSKITTGEAVK 85
           +++ES++CECCGL E+CT  YI+ V   ++ +W+CGLC+EAV+DE  R     T  EAVK
Sbjct: 1   MEIESVRCECCGLMEDCTQDYISEVKSNFDNKWLCGLCSEAVRDEVSRR-KMTTVDEAVK 60

Query: 86  RHMKFHKAFKSSIPPVNPTEDLISAMKQLF-RRSLDSPKKDASRSLGRSNS 136
            H+ F   FK      NP   +   M+Q+  RRS +      S+  GRSN+
Sbjct: 61  AHVSFCGKFKKD----NPAVHVADGMRQMLRRRSGELTNSSTSKKFGRSNT 106

[Close]

BLAST of CmoCh01G017490 vs. NCBI nr
Match: gi|700200230|gb|KGN55388.1| (hypothetical protein Csa_4G648590 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.7e-62
Identity = 121/140 (86.43%), Postives = 129/140 (92.14%), Query Frame = 1


Query: 7   KVIASIEQSIPVTQHNAQVIDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEA 66
           KVI+  EQ  PVTQH+ QVIDVES+KCECCGLTEECTPAYI RV ERYEGRWICGLCAEA
Sbjct: 4   KVISGKEQMAPVTQHSGQVIDVESVKCECCGLTEECTPAYIGRVRERYEGRWICGLCAEA 63

Query: 67  VKDESIRSLSKITTGEAVKRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLDSPKKDA 126
           VKDES+RS S ITTGEAVKRHMKFHKAFKSSIPP+NPTEDLISAMKQL RRSLDSPKKD+
Sbjct: 64  VKDESLRSQSNITTGEAVKRHMKFHKAFKSSIPPLNPTEDLISAMKQLLRRSLDSPKKDS 123

Query: 127 SRSLGRSNSCFSSMPRRRSH 147
           SRSLGRSNSCFS++P RRSH
Sbjct: 124 SRSLGRSNSCFSAIPGRRSH 143

[Close]

BLAST of CmoCh01G017490 vs. NCBI nr
Match: gi|659104076|ref|XP_008452798.1| (PREDICTED: uncharacterized protein LOC103493712 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 3.8e-62
Identity = 120/140 (85.71%), Postives = 128/140 (91.43%), Query Frame = 1


Query: 7   KVIASIEQSIPVTQHNAQVIDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEA 66
           KVI+  EQ  PVTQH+ Q+IDVES+KCECCGLTEECTPAYI RV ERYEGRWICGLCAEA
Sbjct: 4   KVISGKEQMAPVTQHSGQIIDVESVKCECCGLTEECTPAYIGRVRERYEGRWICGLCAEA 63

Query: 67  VKDESIRSLSKITTGEAVKRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLDSPKKDA 126
           VKDES+RS S ITTGEAVKRHMKFHKAFKSSIPP+NPTEDLISAMKQL RRSLDSPKKD 
Sbjct: 64  VKDESLRSHSNITTGEAVKRHMKFHKAFKSSIPPLNPTEDLISAMKQLLRRSLDSPKKDG 123

Query: 127 SRSLGRSNSCFSSMPRRRSH 147
           SRSLGRSNSCFS++P RRSH
Sbjct: 124 SRSLGRSNSCFSAIPGRRSH 143

[Close]

BLAST of CmoCh01G017490 vs. NCBI nr
Match: gi|590574631|ref|XP_007012456.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 162.2 bits (409), Expect = 7.2e-37
Identity = 83/143 (58.04%), Postives = 102/143 (71.33%), Query Frame = 1


Query: 1   MAAKVTKVIASIEQSIPVTQHNAQVIDVESIKCECCGLTEECTPAYIARVCERYEGRWIC 60
           MAA V+K    +E      +H     +VE  +C+CCGLTEECTPAYIA V E++EGRW+C
Sbjct: 1   MAAAVSKDAKKMES----VKHKNLQTEVEFAECDCCGLTEECTPAYIAHVREKFEGRWLC 60

Query: 61  GLCAEAVKDESIRSLSKITTGEAVKRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLD 120
           GLC+EAVKDE++RS   ITT EA+ RH+KF + FKSS PP NP EDLISAMK L RR+LD
Sbjct: 61  GLCSEAVKDETVRSEEDITTNEALDRHLKFCEQFKSSSPPANPAEDLISAMKHLLRRTLD 120

Query: 121 SPKKDA--SRSLGRSNSCFSSMP 142
           SP+K    S S  RS  CFS++P
Sbjct: 121 SPRKSGPPSASFVRSKGCFSTLP 139

[Close]

BLAST of CmoCh01G017490 vs. NCBI nr
Match: gi|823263578|ref|XP_012464555.1| (PREDICTED: uncharacterized protein LOC105783560 [Gossypium raimondii])

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-35
Identity = 83/130 (63.85%), Postives = 97/130 (74.62%), Query Frame = 1


Query: 17  PVTQHNAQVIDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEAVKDESIRSLS 76
           P    N Q I+VE  +C+CCGLTEECTPAYIARV E++EGRW+CGLC+EAVKDE IRS S
Sbjct: 8   PFKNKNNQ-IEVEFAECDCCGLTEECTPAYIARVREKFEGRWLCGLCSEAVKDERIRSSS 67

Query: 77  K---ITTGEAVKRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLDSPKK--DASRSLG 136
               IT  EA+ RHMKF + FKSS PPVNPTEDLI+AM+ L  RSLDSP+K  + S S  
Sbjct: 68  PEDIITINEALVRHMKFCEQFKSSSPPVNPTEDLIAAMRHLILRSLDSPRKNNNGSSSFV 127

Query: 137 RSNSCFSSMP 142
           RS +CFS  P
Sbjct: 128 RSKTCFSRFP 136

[Close]

BLAST of CmoCh01G017490 vs. NCBI nr
Match: gi|720018552|ref|XP_010261824.1| (PREDICTED: uncharacterized protein LOC104600530 [Nelumbo nucifera])

HSP 1 Score: 156.0 bits (393), Expect = 5.1e-35
Identity = 83/141 (58.87%), Postives = 95/141 (67.38%), Query Frame = 1


Query: 14  QSIPVTQHNAQVIDVESIKCECCGLTEECTPAYIARVCERYEGRWICGLCAEAVKDESIR 73
           +S P T       +VE  KC+CCGLTEECTPAYIAR+ ERY+GRWICGLCAEAVKDE +R
Sbjct: 16  ESQPTTIEIGGQSEVEFAKCDCCGLTEECTPAYIARIRERYQGRWICGLCAEAVKDEIVR 75

Query: 74  SLSKITTGEAVKRHMKFHKAFKSSIPPVNPTEDLISAMKQLFRRSLDSPKKDASR----- 133
           S   I+T EA+ RHM F K F+SS PP NPTE LISAM+QL RRSLDSP+   S      
Sbjct: 76  SERLISTEEALNRHMNFCKKFRSSTPPSNPTEHLISAMRQLLRRSLDSPRALRSTPSSPL 135

Query: 134 ---------SLGRSNSCFSSM 141
                    SL RS SCF S+
Sbjct: 136 RKESEVRPPSLARSESCFPSL 156

The following BLAST results are available for this feature:

BLAST of CmoCh01G017490 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G017490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0X0_CUCSA	1.2e-62	86.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G648590 PE=4 SV=1	[more]
A0A061GKL2_THECC	5.0e-37	58.04	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_037408 PE=4 SV=1	[more]
A0A0D2U5C1_GOSRA	1.2e-35	63.85	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G221200 PE=4 SV=1	[more]
A0A0B0MGE7_GOSAR	1.4e-34	62.18	Arginine--tRNA ligase OS=Gossypium arboreum GN=F383_11988 PE=4 SV=1	[more]
A0A0D2LTL3_GOSRA	3.0e-34	62.18	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G019300 PE=4 SV=1	[more]

BLAST of CmoCh01G017490 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G72510.1	2.4e-30	49.65	Protein of unknown function (DUF1677)	[more]
AT2G09970.1	6.0e-26	45.27	Protein of unknown function (DUF1677)	[more]
AT5G20670.1	3.0e-25	45.00	Protein of unknown function (DUF1677)	[more]
AT4G14819.1	5.5e-19	44.55	Protein of unknown function (DUF1677)	[more]
AT3G22540.1	1.2e-18	41.44	Protein of unknown function (DUF1677)	[more]

BLAST of CmoCh01G017490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700200230\|gb\|KGN55388.1\|	1.7e-62	86.43	hypothetical protein Csa_4G648590 [Cucumis sativus]	[more]
gi\|659104076\|ref\|XP_008452798.1\|	3.8e-62	85.71	PREDICTED: uncharacterized protein LOC103493712 [Cucumis melo]	[more]
gi\|590574631\|ref\|XP_007012456.1\|	7.2e-37	58.04	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|823263578\|ref\|XP_012464555.1\|	1.8e-35	63.85	PREDICTED: uncharacterized protein LOC105783560 [Gossypium raimondii]	[more]
gi\|720018552\|ref\|XP_010261824.1\|	5.1e-35	58.87	PREDICTED: uncharacterized protein LOC104600530 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012876	DUF1677_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G017490.1	CmoCh01G017490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012876	Protein of unknown function DUF1677, plant	PFAM	PF07911	DUF1677	coord: 28..117 score: 2.3
None	No IPR available	PANTHER	PTHR33108	FAMILY NOT NAMED	coord: 26..140 score: 3.1
None	No IPR available	PANTHER	PTHR33108:SF15	SUBFAMILY NOT NAMED	coord: 26..140 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G017490	Cucsa.271140	Cucumber (Gy14) v1	cgycmoB0748
CmoCh01G017490	CmaCh09G003740	Cucurbita maxima (Rimu)	cmacmoB050
CmoCh01G017490	CmaCh01G016950	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G017490	Cla007462	Watermelon (97103) v1	cmowmB435
CmoCh01G017490	Csa4G648590	Cucumber (Chinese Long) v2	cmocuB463
CmoCh01G017490	MELO3C016923	Melon (DHL92) v3.5.1	cmomeB424
CmoCh01G017490	ClCG05G015860	Watermelon (Charleston Gray)	cmowcgB413
CmoCh01G017490	CSPI04G25830	Wild cucumber (PI 183967)	cmocpiB467
CmoCh01G017490	Lsi04G013760	Bottle gourd (USVL1VR-Ls)	cmolsiB416
CmoCh01G017490	Cp4.1LG02g05720	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G017490	Cp4.1LG06g02680	Cucurbita pepo (Zucchini)	cmocpeB467
CmoCh01G017490	MELO3C032302.2	Melon (DHL92) v3.6.1	cmomedB488
CmoCh01G017490	CsaV3_4G036150	Cucumber (Chinese Long) v3	cmocucB0553
CmoCh01G017490	Cla97C05G096830	Watermelon (97103) v2	cmowmbB462
CmoCh01G017490	Bhi09G002523	Wax gourd	cmowgoB0601
CmoCh01G017490	CsGy4G024130	Cucumber (Gy14) v2	cgybcmoB486
CmoCh01G017490	Carg10728	Silver-seed gourd	carcmoB1045
CmoCh01G017490	Carg02802	Silver-seed gourd	carcmoB0874

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G017490	CmoCh09G003760	Cucurbita moschata (Rifu)	cmocmoB020

The following block(s) are covering this gene:

None