ClCG05G015860 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCGAAAGTGACGACGATTACGAAGGTGATATCCGGCATGGAGCAGACGGCTCCCGTGACGCAGCATAACAGTCAAGTAATGGACGTGGAGTCTGTAAAATGCGAGTGCTGTGGATTGACGGAGGAGTGTACTCCGGCGTACATCAGCCGTGTACGGGAGAGATACGAAGGGCGATGGATTTGTGGACTCTGTGCGGAAGCTGTGAAAGACGAGTCTCTGAGATCTCAGAGCAAAATCACTACCGGTGAAGCTGTGAAGCGGCATATGAAGTTTCACAAAGCATTCAAATCTTCAATTCCTCCTCTGAATCCAACTGAGGATTTGATTTCGGCTATGAAACAGCTTCTCCGACGATCGCTGGACTCTCCAAAGAAGGACGCCTCACGATCGCTTGGCCGTTCAAATAGCTGTTTCTCCGCCATTCCGGGCCGGCGGAATCATTATGATTAG ATGGCGGCGAAAGTGACGACGATTACGAAGGTGATATCCGGCATGGAGCAGACGGCTCCCGTGACGCAGCATAACAGTCAAGTAATGGACGTGGAGTCTGTAAAATGCGAGTGCTGTGGATTGACGGAGGAGTGTACTCCGGCGTACATCAGCCGTGTACGGGAGAGATACGAAGGGCGATGGATTTGTGGACTCTGTGCGGAAGCTGTGAAAGACGAGTCTCTGAGATCTCAGAGCAAAATCACTACCGGTGAAGCTGTGAAGCGGCATATGAAGTTTCACAAAGCATTCAAATCTTCAATTCCTCCTCTGAATCCAACTGAGGATTTGATTTCGGCTATGAAACAGCTTCTCCGACGATCGCTGGACTCTCCAAAGAAGGACGCCTCACGATCGCTTGGCCGTTCAAATAGCTGTTTCTCCGCCATTCCGGGCCGGCGGAATCATTATGATTAG ATGGCGGCGAAAGTGACGACGATTACGAAGGTGATATCCGGCATGGAGCAGACGGCTCCCGTGACGCAGCATAACAGTCAAGTAATGGACGTGGAGTCTGTAAAATGCGAGTGCTGTGGATTGACGGAGGAGTGTACTCCGGCGTACATCAGCCGTGTACGGGAGAGATACGAAGGGCGATGGATTTGTGGACTCTGTGCGGAAGCTGTGAAAGACGAGTCTCTGAGATCTCAGAGCAAAATCACTACCGGTGAAGCTGTGAAGCGGCATATGAAGTTTCACAAAGCATTCAAATCTTCAATTCCTCCTCTGAATCCAACTGAGGATTTGATTTCGGCTATGAAACAGCTTCTCCGACGATCGCTGGACTCTCCAAAGAAGGACGCCTCACGATCGCTTGGCCGTTCAAATAGCTGTTTCTCCGCCATTCCGGGCCGGCGGAATCATTATGATTAG MAAKVTTITKVISGMEQTAPVTQHNSQVMDVESVKCECCGLTEECTPAYISRVRERYEGRWICGLCAEAVKDESLRSQSKITTGEAVKRHMKFHKAFKSSIPPLNPTEDLISAMKQLLRRSLDSPKKDASRSLGRSNSCFSAIPGRRNHYD
BLAST of ClCG05G015860 vs. TrEMBL
Match: A0A0A0L0X0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G648590 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.0e-69 Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 1
BLAST of ClCG05G015860 vs. TrEMBL
Match: A0A061GKL2_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_037408 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 7.1e-39 Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 1
BLAST of ClCG05G015860 vs. TrEMBL
Match: A0A0D2U5C1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G221200 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 5.1e-37 Identity = 80/130 (61.54%), Postives = 100/130 (76.92%), Query Frame = 1
BLAST of ClCG05G015860 vs. TrEMBL
Match: V7CUQ9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G044700g PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 1.9e-36 Identity = 86/147 (58.50%), Postives = 102/147 (69.39%), Query Frame = 1
BLAST of ClCG05G015860 vs. TrEMBL
Match: A0A0B0MY98_GOSAR (Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing 1 OS=Gossypium arboreum GN=F383_29696 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.6e-35 Identity = 78/126 (61.90%), Postives = 98/126 (77.78%), Query Frame = 1
BLAST of ClCG05G015860 vs. TAIR10
Match: AT1G72510.1 (AT1G72510.1 Protein of unknown function (DUF1677)) HSP 1 Score: 136.3 bits (342), Expect = 1.5e-32 Identity = 72/143 (50.35%), Postives = 91/143 (63.64%), Query Frame = 1
BLAST of ClCG05G015860 vs. TAIR10
Match: AT2G09970.1 (AT2G09970.1 Protein of unknown function (DUF1677)) HSP 1 Score: 123.6 bits (309), Expect = 1.0e-28 Identity = 70/145 (48.28%), Postives = 90/145 (62.07%), Query Frame = 1
BLAST of ClCG05G015860 vs. TAIR10
Match: AT5G20670.1 (AT5G20670.1 Protein of unknown function (DUF1677)) HSP 1 Score: 119.8 bits (299), Expect = 1.5e-27 Identity = 67/149 (44.97%), Postives = 91/149 (61.07%), Query Frame = 1
BLAST of ClCG05G015860 vs. TAIR10
Match: AT4G14819.1 (AT4G14819.1 Protein of unknown function (DUF1677)) HSP 1 Score: 100.9 bits (250), Expect = 7.0e-22 Identity = 51/110 (46.36%), Postives = 64/110 (58.18%), Query Frame = 1
BLAST of ClCG05G015860 vs. TAIR10
Match: AT3G22540.1 (AT3G22540.1 Protein of unknown function (DUF1677)) HSP 1 Score: 99.8 bits (247), Expect = 1.6e-21 Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 1
BLAST of ClCG05G015860 vs. NCBI nr
Match: gi|700200230|gb|KGN55388.1| (hypothetical protein Csa_4G648590 [Cucumis sativus]) HSP 1 Score: 270.8 bits (691), Expect = 1.5e-69 Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 1
BLAST of ClCG05G015860 vs. NCBI nr
Match: gi|659104076|ref|XP_008452798.1| (PREDICTED: uncharacterized protein LOC103493712 [Cucumis melo]) HSP 1 Score: 268.1 bits (684), Expect = 9.5e-69 Identity = 129/140 (92.14%), Postives = 133/140 (95.00%), Query Frame = 1
BLAST of ClCG05G015860 vs. NCBI nr
Match: gi|590574631|ref|XP_007012456.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 168.3 bits (425), Expect = 1.0e-38 Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 1
BLAST of ClCG05G015860 vs. NCBI nr
Match: gi|720018552|ref|XP_010261824.1| (PREDICTED: uncharacterized protein LOC104600530 [Nelumbo nucifera]) HSP 1 Score: 164.5 bits (415), Expect = 1.5e-37 Identity = 87/159 (54.72%), Postives = 107/159 (67.30%), Query Frame = 1
BLAST of ClCG05G015860 vs. NCBI nr
Match: gi|823263578|ref|XP_012464555.1| (PREDICTED: uncharacterized protein LOC105783560 [Gossypium raimondii]) HSP 1 Score: 162.2 bits (409), Expect = 7.3e-37 Identity = 80/130 (61.54%), Postives = 100/130 (76.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |