CmoCh01G017400 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G017400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RING-finger ubiquitin ligase
Location	Cmo_Chr01 : 12991049 .. 12993776 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATTCATCGCTAAGGATACATCCACGTGTGGGATCTGGCGGTTGCAGATCGTCAACATTGTAGCGTCGGCCAGGTCGGATTCGTGCTTTTGATTGCCCCTTCGTCAAGAAATTCTCCGATTCGATTCATAGAGATTTCGAGTTATAAATTCGCTAAGAGGAGAAAATTTGTTATCAGACGAGGAAGAAGAAATGGAATCGGAGGATTCATTGAGATCAAGATTGGAGGAATTGCAAAAAGATTTGAGGAAGAAACAGAGATTCGAGGAAGCAGTTTCCACCACTATATCTCTTCTTCAAGATTGCTATCCTACTGCTTCTCCTTCTCTACGCAAATCGGTCCTTCATCTTTCCCCTCTTTTTATTCAATTTTGTTGTCTTTCAATAGTTCTTGATCTCTCGTTCATTCGAATGTTCCATTTCGTGTGAAATTGTCTCGTATTGTTATTGTTCTTGTGGAATTTGTAATTTTCGTGAAATCTTGTTGGTTTCTACTAGTACGGTGATTTATCATTTCGTTTGATTCTTAATTTTGTCTGTGGAGTTGAATTGTTGATATGTTAATGTTTGATGACAGTTCTATTCCGTAATTTGCCGAGTTGCTACAGTATTGAAGACAAGATATACGGCCCCAGGGTTTTGGTGTTCTGGTCTCAAGCTTTTTGAGGTTTCTTTGAGTCTGGTCTCTGATCCTTCTGAGAAACAACAATTACAGGCTAACATAGCTCATGCCAAGGAAATTCTGCACCAAATTGACAATCCATCTTCACCGTCACAACGTACTTCAAATGGAGGTACTGGTTTAGACACACTTTTTTTGTTAAATTGGTTGGCTATTTGTTCAAATGTAAGAATTGAAATGTTCTTATGATGATTCAGGCTATCTTTTTGAGGGCCATCTCACTGTTGATCCGGAGCCACCCCAGCCCCAATGGCTGGTGCAATCGAACCTCTTGACAGCCGCTGCAGCTACGCTATTTAACGCTGAATCTTCTCAAGCTCCGGTTGACAACAACAACAATTCCGAGAATACTACTGACTTCCTTCAAACGGTTATTGAAAATCTAGAGAACGCTGTAGATGGGGTAATGTTTATTTTAAGTCTCTCATGATTTCTTTCCTTAGGGCCTTTTTTCAAGTAAGCAACTGACCTTTCATTGAGTAAAATGAAGGGAAAACGAAACCATTCTAAAAAACAAGCCTAACAAAAAAGGTAGTCCAAGAACTACATACATAAAGAAGCTTTCATCAAGCTTTTTCGATAATGACTAGTTTAGAATATATATAAACGCTAAGAAGCTTAAGGTTCTTTCTTTTTGTTTAGCATTGATTGAACAGGCTATTATAGTATGAAATATTGACTTAAACCTCAACAATGCCTTTTCTTCCCCAATTGATAGGAATAATTTATGTGTTGGGTTTTATAAATCAAATTAATATCCACACTCGTATATGTGAAGAAGGGAGAGTTTAAAATGTAAAGAAAAGATTCAATGGTGACTTCTGGATTCGATGGTGATTATGCTACTTTATCATATTGAACTCATAGCAAGTTTATTGTTTTTGTAATTGAGAGAAAATGAAGGATGTGCATTGGATCAGTATCGTGGTTTAAATGTGTATGAGTTGATTGTTGTTAGGGGTGTACGGTTCGGGTTGGGTTGGGTTGAGAGATTTTTTTGGACCAACTCAAAAGTTCGGGTTTGGGTTGTCAGGTCGAATGTACACCCCTAATTGTTGGTACCATTTCTATAAGATGTTGCACACTTTATGGATATCCATATAGATCGGATTGTTCGATTTGTTGTGTCTTGGCTTGTGGGATTCTGGGTGGTGTTCGTTGGTAATGCTGTTGTTTCAAATGCTTAAACCATTTGAGTACCTGCATTGTAACATATTTATTCTGTCTATTTAGTTCATGGATTTGGAAACGTATTTATTCTGTCTATTTAGTTCATGGATTTGGAAACGGTTAGCGGACCTCCGAAAGTTCCTCCTGCAAGTAAAGAAGTCGTTGAGAAACTTCCTGTAATTACTATAACAGAGGAAGTTCTTGCCAAGCTAGGAAGAGATGTACAATGTGCCATTTGCAGGGAAAACTTGGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAGCACACATTCCACCCACCTTGTTTGAAGCCATGGCTGGTAATACGCTAACTTGATTGATCTCTCTATATGCTTAAAGCCCATTCTTTCTTAGTTTAAGCTCACCATGTGCTAATTGATTATAGGATGAGCATAACTCTTGCCCGATCTGTCGACACGAATTGCCCACCGATGACCATAAATATGAGAGCTGGAAGGAGCGAGAGAAGGAGGCAGAAGAAGAGAGAAAAGGAGCTGCAAATGCTGTTCGTGGCGGCGAATATATGTATATTTGAATGCCATTGCATTTTCTTACTATCAGGTAGTCAATTACTTAAGTAACGTCTAATAAGGCTATTTCATATGTGATTTCTTTGAGACGATATTGGAGCTTCAATTTTTAGCTAGTCTTCTATAGTTGAAACCACATATAATAGCTTCTCATCTCTGCATCTGTCACTAGAATGTTACACTTATATGGTTCCGTTGATCAGATGATATGGGGCTATGTTTACTATTGTACCGATACAAACTACGATACAAACTACTGCAAGCCTTTGATACATCAGAGTATTAATGTGAGATCCCACATTGATTGGGGAGGAGGACGAA

mRNA sequence

TATATTCATCGCTAAGGATACATCCACGTGTGGGATCTGGCGGTTGCAGATCGTCAACATTGTAGCGTCGGCCAGGTCGGATTCGTGCTTTTGATTGCCCCTTCGTCAAGAAATTCTCCGATTCGATTCATAGAGATTTCGAGTTATAAATTCGCTAAGAGGAGAAAATTTGTTATCAGACGAGGAAGAAGAAATGGAATCGGAGGATTCATTGAGATCAAGATTGGAGGAATTGCAAAAAGATTTGAGGAAGAAACAGAGATTCGAGGAAGCAGTTTCCACCACTATATCTCTTCTTCAAGATTGCTATCCTACTGCTTCTCCTTCTCTACGCAAATCGTTCTTGATCTCTCGTTCATTCGAATGTTCCATTTCGTGTGAAATTGTCTCGTATTGTTATTGTTCTTGTGGAATTTGTAATTTTCGTGAAATCTTGTTGGTTTCTACTAGTACGTTCTATTCCGTAATTTGCCGAGTTGCTACAGTATTGAAGACAAGATATACGGCCCCAGGGTTTTGGTGTTCTGGTCTCAAGCTTTTTGAGGTTTCTTTGAGTCTGGTCTCTGATCCTTCTGAGAAACAACAATTACAGGCTAACATAGCTCATGCCAAGGAAATTCTGCACCAAATTGACAATCCATCTTCACCGTCACAACGCTATCTTTTTGAGGGCCATCTCACTGTTGATCCGGAGCCACCCCAGCCCCAATGGCTGGTGCAATCGAACCTCTTGACAGCCGCTGCAGCTACGCTATTTAACGCTGAATCTTCTCAAGCTCCGGTTGACAACAACAACAATTCCGAGAATACTACTGACTTCCTTCAAACGTTCATGGATTTGGAAACGGTTAGCGGACCTCCGAAAGTTCCTCCTGCAAGTAAAGAAGTCGTTGAGAAACTTCCTGTAATTACTATAACAGAGGAAGTTCTTGCCAAGCTAGGAAGAGATGTACAATGTGCCATTTGCAGGGAAAACTTGGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAGCACACATTCCACCCACCTTGTTTGAAGCCATGGCTGGATGAGCATAACTCTTGCCCGATCTGTCGACACGAATTGCCCACCGATGACCATAAATATGAGAGCTGGAAGGAGCGAGAGAAGGAGGCAGAAGAAGAGAGAAAAGGAGCTGCAAATGCTGTTCGTGGCGGCGAATATATGTATATTTGAATGCCATTGCATTTTCTTACTATCAGGTAGTCAATTACTTAAGTAACGTCTAATAAGGCTATTTCATATGTGATTTCTTTGAGACGATATTGGAGCTTCAATTTTTAGCTAGTCTTCTATAGTTGAAACCACATATAATAGCTTCTCATCTCTGCATCTGTCACTAGAATGTTACACTTATATGGTTCCGTTGATCAGATGATATGGGGCTATGTTTACTATTGTACCGATACAAACTACGATACAAACTACTGCAAGCCTTTGATACATCAGAGTATTAATGTGAGATCCCACATTGATTGGGGAGGAGGACGAA

Coding sequence (CDS)

ATGGAATCGGAGGATTCATTGAGATCAAGATTGGAGGAATTGCAAAAAGATTTGAGGAAGAAACAGAGATTCGAGGAAGCAGTTTCCACCACTATATCTCTTCTTCAAGATTGCTATCCTACTGCTTCTCCTTCTCTACGCAAATCGTTCTTGATCTCTCGTTCATTCGAATGTTCCATTTCGTGTGAAATTGTCTCGTATTGTTATTGTTCTTGTGGAATTTGTAATTTTCGTGAAATCTTGTTGGTTTCTACTAGTACGTTCTATTCCGTAATTTGCCGAGTTGCTACAGTATTGAAGACAAGATATACGGCCCCAGGGTTTTGGTGTTCTGGTCTCAAGCTTTTTGAGGTTTCTTTGAGTCTGGTCTCTGATCCTTCTGAGAAACAACAATTACAGGCTAACATAGCTCATGCCAAGGAAATTCTGCACCAAATTGACAATCCATCTTCACCGTCACAACGCTATCTTTTTGAGGGCCATCTCACTGTTGATCCGGAGCCACCCCAGCCCCAATGGCTGGTGCAATCGAACCTCTTGACAGCCGCTGCAGCTACGCTATTTAACGCTGAATCTTCTCAAGCTCCGGTTGACAACAACAACAATTCCGAGAATACTACTGACTTCCTTCAAACGTTCATGGATTTGGAAACGGTTAGCGGACCTCCGAAAGTTCCTCCTGCAAGTAAAGAAGTCGTTGAGAAACTTCCTGTAATTACTATAACAGAGGAAGTTCTTGCCAAGCTAGGAAGAGATGTACAATGTGCCATTTGCAGGGAAAACTTGGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAGCACACATTCCACCCACCTTGTTTGAAGCCATGGCTGGATGAGCATAACTCTTGCCCGATCTGTCGACACGAATTGCCCACCGATGACCATAAATATGAGAGCTGGAAGGAGCGAGAGAAGGAGGCAGAAGAAGAGAGAAAAGGAGCTGCAAATGCTGTTCGTGGCGGCGAATATATGTATATTTGA

Homology

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BLAST of CmoCh01G017400 vs. Swiss-Prot
Match: AIP2_ARATH (E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2 PE=1 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.5e-90
Identity = 168/257 (65.37%), Postives = 195/257 (75.88%), Query Frame = 1


Query: 88  FYSVICRVATVLKTRYTAPGFWCSGLKLFEVSLSLVSDPSEKQQLQANIAHAKEILHQID 147
           FY V+ RVATVLKTRYTA GFW +GL LFE +  LVSD SEK+ L++ +A AKE L ++D
Sbjct: 57  FYIVVSRVATVLKTRYTATGFWVAGLSLFEEAERLVSDASEKKHLKSCVAQAKEQLSEVD 116

Query: 148 N-PSSPSQRYLFEGHLTVDPEPPQPQWLVQSNLLTAAAATLFNAESSQAPVDNNNNSENT 207
           N P+  SQ YLFEGHLTVD EPPQPQWLVQ NL++A A+ +   ESS  P +N      T
Sbjct: 117 NQPTESSQGYLFEGHLTVDREPPQPQWLVQQNLMSAFAS-IVGGESSNGPTENTIGE--T 176

Query: 208 TDFLQTFM--------DLETVSGPPKVPPASKEVVEKLPVITITEEVLAKLGRDVQCAIC 267
            + +Q  +        D+    GPP+ PPASKEVVEKLPVI  TEE+L K G + +C IC
Sbjct: 177 ANLMQELINGLDMIIPDILDDGGPPRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCIC 236

Query: 268 RENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWKEREKEAEE 327
           +ENL + DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDD KYE+WKEREKEAEE
Sbjct: 237 KENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDQKYENWKEREKEAEE 296

Query: 328 ERKGAANAVRGGEYMYI 336
           ERKGA NAVRGGEYMY+
Sbjct: 297 ERKGAENAVRGGEYMYV 310

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BLAST of CmoCh01G017400 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.9e-19
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 1


Query: 226 PPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPW 285
           PPASK  +E LP++ IT+  L       QCA+C ++     + +++PCKH +H  CL PW
Sbjct: 197 PPASKSAIEALPLVNITKSNLNSEFN--QCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPW 256

Query: 286 LDEHNSCPICRHELPTDDHKYE 308
           L+ HNSCP+CRHELPTDD  YE
Sbjct: 257 LELHNSCPVCRHELPTDDPDYE 276

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BLAST of CmoCh01G017400 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.6e-18
Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 1


Query: 226 PPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPW 285
           PPASK  ++ LP + +T+++L       QCA+C +       ++++PCKH FH  CL PW
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMN--QCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPW 248

Query: 286 LDEHNSCPICRHELPTDDHKYES 309
           L+ HNSCP+CR ELPTDD  YE+
Sbjct: 249 LELHNSCPVCRFELPTDDPDYEN 269

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BLAST of CmoCh01G017400 vs. Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.4e-18
Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 1


Query: 226 PPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPW 285
           PPASK+VVE LP +T+T E   +    ++C +C       + +++LPC+H FH  C+ PW
Sbjct: 53  PPASKKVVESLPKVTVTPE---QADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPW 112

Query: 286 LDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEY 333
           L + NSCP+CRHELPTD   YE +K+ EK   ++++     + G  Y
Sbjct: 113 LGKTNSCPLCRHELPTDSPDYEEFKQ-EKARRQQKEHRLECLHGAMY 155

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BLAST of CmoCh01G017400 vs. Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.8e-18
Identity = 43/107 (40.19%), Postives = 67/107 (62.62%), Query Frame = 1


Query: 226 PPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPW 285
           PPA+K+VVE LP +T+T E   +    ++C +C       + +++LPC+H FH  C+ PW
Sbjct: 53  PPAAKKVVESLPKVTVTPE---QADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPW 112

Query: 286 LDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEY 333
           L + NSCP+CRHELPTD  +YE +K+ EKE  ++++     +    Y
Sbjct: 113 LGKTNSCPLCRHELPTDSPEYEEYKQ-EKERRQQKEHRLECLHDAMY 155

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BLAST of CmoCh01G017400 vs. TrEMBL
Match: A0A151RK20_CAJCA (E3 ubiquitin-protein ligase CG7694 family OS=Cajanus cajan GN=KK1_035681 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 6.9e-103
Identity = 215/353 (60.91%), Postives = 246/353 (69.69%), Query Frame = 1


Query: 1   MESEDSLRSRLEELQKDLRKKQRFEEAVSTTISLLQDCYPTASPSLRKSFLISRSFECSI 60
           M+SED L+  LEELQK L KKQ+FE AVS+  SLLQ  YP+ASPSLRKSF        S+
Sbjct: 1   MDSEDLLKQELEELQKQLGKKQQFEAAVSSLKSLLQPIYPSASPSLRKSFY-------SV 60

Query: 61  SCEIVSYCYCSCGICNFREILLVSTSTFYSVICRVATVLKTRYTAPGFWCSGLKLFEVSL 120
            C                                VATVL+TRYTAPGFW +G+ LFE + 
Sbjct: 61  ICR-------------------------------VATVLRTRYTAPGFWNAGMDLFEQAH 120

Query: 121 SLVSDPSEKQQLQANIAHAKEILHQIDNPSSPSQ--------RYLFEGHLTVDPEPPQPQ 180
            LVS+PSEK+ L+A IA A+E LH  D+PS  SQ         YLFEGHLTVDPEPPQPQ
Sbjct: 121 LLVSEPSEKEHLKACIALAREHLHLEDDPSQASQPADNQANRGYLFEGHLTVDPEPPQPQ 180

Query: 181 WLVQSNLLTAAAATLFNAESSQAPVDNNNNSENTTDFLQTFMD-LETV---------SGP 240
           WL QSNLLT AAATLF AESSQA   N+   E+  + LQ  ++ LE V         +  
Sbjct: 181 WLAQSNLLT-AAATLFAAESSQASAANDTTQEDAANMLQDLINRLEEVVPLMVDGGGTVA 240

Query: 241 PKVPPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCL 300
           P+VPPASKEVV KLPVIT+TEE+LA LG+D +CAICRENL ++DKMQELPCKHTFHPPCL
Sbjct: 241 PRVPPASKEVVAKLPVITLTEEILANLGKDAECAICRENLVLNDKMQELPCKHTFHPPCL 300

Query: 301 KPWLDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEYMYI 336
           KPWLDEHNSCPICR+EL TDDH YESWKEREKEAEEERKGA NA+RGGEYMY+
Sbjct: 301 KPWLDEHNSCPICRYELQTDDHAYESWKEREKEAEEERKGAENAIRGGEYMYV 314

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BLAST of CmoCh01G017400 vs. TrEMBL
Match: V4UJ68_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008969mg PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.1e-97
Identity = 182/265 (68.68%), Postives = 208/265 (78.49%), Query Frame = 1


Query: 88  FYSVICRVATVLKTRYTAPGFWCSGLKLFEVSLSLVSDPSEKQQLQANIAHAKEILHQID 147
           FYSV+CRVAT+LKTRYTAPGFW +GL+LFE++ SLVSDPS+KQ L+A IA AKE LH+ID
Sbjct: 50  FYSVVCRVATILKTRYTAPGFWLAGLRLFELAESLVSDPSQKQHLKACIAKAKEHLHEID 109

Query: 148 NPSSPSQR--------YLFEGHLTVDPEPPQPQWLVQSNLLTAAAATLFNAESSQAPVDN 207
           N    S+         YLFEGHLTVDPEPPQPQWLVQ+NL+ A A+    AESS+   ++
Sbjct: 110 NAPEASEATYNTTNRGYLFEGHLTVDPEPPQPQWLVQANLMNAVASLSSTAESSRGLAES 169

Query: 208 NNNSENTTDFLQTFMD---------LETVSGPPKVPPASKEVVEKLPVITITEEVLAKLG 267
            N SE   +  Q  ++         LET S  P+VPPASKEVV KLPVIT+TEE+L KLG
Sbjct: 170 INTSETVANLFQELVNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLG 229

Query: 268 RDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWK 327
            D +CAIC+ENL V DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL TDDH YESWK
Sbjct: 230 HDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWK 289

Query: 328 EREKEAEEERKGAANAVRGGEYMYI 336
           EREKEA+EERKGAANAVRGGEYMY+
Sbjct: 290 EREKEAQEERKGAANAVRGGEYMYV 314

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BLAST of CmoCh01G017400 vs. TrEMBL
Match: A0A067G2A8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021283mg PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.1e-97
Identity = 182/265 (68.68%), Postives = 208/265 (78.49%), Query Frame = 1


Query: 88  FYSVICRVATVLKTRYTAPGFWCSGLKLFEVSLSLVSDPSEKQQLQANIAHAKEILHQID 147
           FYSV+CRVAT+LKTRYTAPGFW +GL+LFE++ SLVSDPS+KQ L+A IA AKE LH+ID
Sbjct: 50  FYSVVCRVATILKTRYTAPGFWLAGLRLFELAESLVSDPSQKQHLKACIAKAKEHLHEID 109

Query: 148 NPSSPSQR--------YLFEGHLTVDPEPPQPQWLVQSNLLTAAAATLFNAESSQAPVDN 207
           N    S+         YLFEGHLTVDPEPPQPQWLVQ+NL+ A A+    AESS+   ++
Sbjct: 110 NAPEASEATYNTTNRGYLFEGHLTVDPEPPQPQWLVQANLMNAVASLSSTAESSRGLAES 169

Query: 208 NNNSENTTDFLQTFMD---------LETVSGPPKVPPASKEVVEKLPVITITEEVLAKLG 267
            N SE   +  Q  ++         LET S  P+VPPASKEVV KLPVIT+TEE+L KLG
Sbjct: 170 INTSETVANLFQELVNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLG 229

Query: 268 RDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWK 327
            D +CAIC+ENL V DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL TDDH YESWK
Sbjct: 230 HDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWK 289

Query: 328 EREKEAEEERKGAANAVRGGEYMYI 336
           EREKEA+EERKGAANAVRGGEYMY+
Sbjct: 290 EREKEAQEERKGAANAVRGGEYMYV 314

[Close]

BLAST of CmoCh01G017400 vs. TrEMBL
Match: W9RHQ9_9ROSA (E3 ubiquitin-protein ligase AIP2 OS=Morus notabilis GN=L484_018636 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 3.3e-97
Identity = 206/351 (58.69%), Postives = 238/351 (67.81%), Query Frame = 1


Query: 1   MESE-DSLRSRLEELQKDLRKKQRFEEAVSTTISLLQDCYPTASPSLRKSFLISRSFECS 60
           MES+  SL+ +LEELQ+DL KK               + +  A  SL KS L  R    S
Sbjct: 1   MESDGSSLKQQLEELQRDLSKK---------------NKFEDAVSSL-KSLLFRRYSSSS 60

Query: 61  ISCEIVSYCYCSCGICNFREILLVSTSTFYSVICRVATVLKTRYTAPGFWCSGLKLFEVS 120
            S                         +FY+VICR ATVLK RYT+PGFW +GL LFE +
Sbjct: 61  PSIR----------------------KSFYTVICRAATVLKARYTSPGFWLAGLGLFEQA 120

Query: 121 LSLVSDPSEKQQLQANIAHAKEILHQIDNP--SSPSQR-YLFEGHLTVDPEPPQPQWLVQ 180
             LVSDPSEK  LQ+ IA AK++LHQ +NP  S P+   YLFEGHLTVDPEPPQPQWLVQ
Sbjct: 121 HGLVSDPSEKSHLQSCIAQAKDVLHQPENPVPSQPADSGYLFEGHLTVDPEPPQPQWLVQ 180

Query: 181 SNLLTAAAATLFNAESSQAPVDNNNNS------------ENTTDFLQTFMDLETVSGPPK 240
           SNLL AAA  L    SS+AP +N + S            EN  D L   M+ E   GPP+
Sbjct: 181 SNLLNAAATLLTAESSSRAPAENEDASRSAAANLIQSLIENLDDVLIPIMEDE--RGPPR 240

Query: 241 VPPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKP 300
           VPPASKEVV KLP+ITITEE+L KLG+D +CAIC+ENL V+D+MQELPCKHTFHPPCLKP
Sbjct: 241 VPPASKEVVAKLPIITITEEILGKLGKDAECAICKENLVVNDEMQELPCKHTFHPPCLKP 300

Query: 301 WLDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEYMYI 336
           WLDEHNSCPICRHEL TDDH+YESWKERE+EAEEERKGAANA+RGGEYMY+
Sbjct: 301 WLDEHNSCPICRHELQTDDHEYESWKEREREAEEERKGAANAIRGGEYMYV 311

[Close]

BLAST of CmoCh01G017400 vs. TrEMBL
Match: T2DNP9_PHAVU (E3 ubiquitin-protein ligase AIP2-like isoform 1 OS=Phaseolus vulgaris GN=PHAVU_001G043900g PE=2 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.2e-96
Identity = 205/354 (57.91%), Postives = 238/354 (67.23%), Query Frame = 1


Query: 1   MESEDSLRSRLEELQKDLRKKQRFEEAVSTTISLLQDCYPTASPSLRKSFLISRSFECSI 60
           MESED ++  LEELQK L KKQ                                 FE S+
Sbjct: 1   MESEDLVKQELEELQKQLGKKQ--------------------------------KFEASV 60

Query: 61  SCEIVSYCYCSCGI-CNFREILLVSTSTFYSVICRVATVLKTRYTAPGFWCSGLKLFEVS 120
           S          C + C++    L    +FYSVICRVATVLK+RYTAPGFW +GL LFE++
Sbjct: 61  SS-------LKCLLQCSYPSASLSLRQSFYSVICRVATVLKSRYTAPGFWNAGLGLFELA 120

Query: 121 LSLVSDPSEKQQLQANIAHAKEILHQIDNPSSPSQR---------YLFEGHLTVDPEPPQ 180
             LVS+PSEK+ L+A IA A+E LH  DNPS  + +         YLFEGHLTVDPEPPQ
Sbjct: 121 YLLVSEPSEKEHLKACIAQAREHLHLEDNPSLQASQFSDNQAHRGYLFEGHLTVDPEPPQ 180

Query: 181 PQWLVQSNLLTAAAATLFNAESSQAPVDNNNNSENTTDFLQTFMD-LETV--------SG 240
           PQWLVQSNLL+ AA TLF AESSQA   N    E+  + LQ  ++ LE V        + 
Sbjct: 181 PQWLVQSNLLSTAA-TLFAAESSQASAANETTQEDAANMLQDLINRLEEVVPLMVDEGTV 240

Query: 241 PPKVPPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPC 300
            P+ PPASKEVV KLPVIT+TEE+LA LG+D +CAICRENL ++DKMQELPCKHTFHPPC
Sbjct: 241 APRAPPASKEVVAKLPVITLTEEILATLGKDAECAICRENLVLNDKMQELPCKHTFHPPC 300

Query: 301 LKPWLDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEYMYI 336
           LKPWLDEHNSCPICR+EL TDDH YESWKEREKEAEEERKGA NA+RGGEYMY+
Sbjct: 301 LKPWLDEHNSCPICRYELQTDDHAYESWKEREKEAEEERKGAENAIRGGEYMYV 314

[Close]

BLAST of CmoCh01G017400 vs. TAIR10
Match: AT5G20910.1 (AT5G20910.1 RING/U-box superfamily protein)

HSP 1 Score: 333.6 bits (854), Expect = 1.4e-91
Identity = 168/257 (65.37%), Postives = 195/257 (75.88%), Query Frame = 1


Query: 88  FYSVICRVATVLKTRYTAPGFWCSGLKLFEVSLSLVSDPSEKQQLQANIAHAKEILHQID 147
           FY V+ RVATVLKTRYTA GFW +GL LFE +  LVSD SEK+ L++ +A AKE L ++D
Sbjct: 57  FYIVVSRVATVLKTRYTATGFWVAGLSLFEEAERLVSDASEKKHLKSCVAQAKEQLSEVD 116

Query: 148 N-PSSPSQRYLFEGHLTVDPEPPQPQWLVQSNLLTAAAATLFNAESSQAPVDNNNNSENT 207
           N P+  SQ YLFEGHLTVD EPPQPQWLVQ NL++A A+ +   ESS  P +N      T
Sbjct: 117 NQPTESSQGYLFEGHLTVDREPPQPQWLVQQNLMSAFAS-IVGGESSNGPTENTIGE--T 176

Query: 208 TDFLQTFM--------DLETVSGPPKVPPASKEVVEKLPVITITEEVLAKLGRDVQCAIC 267
            + +Q  +        D+    GPP+ PPASKEVVEKLPVI  TEE+L K G + +C IC
Sbjct: 177 ANLMQELINGLDMIIPDILDDGGPPRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCIC 236

Query: 268 RENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWKEREKEAEE 327
           +ENL + DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDD KYE+WKEREKEAEE
Sbjct: 237 KENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDQKYENWKEREKEAEE 296

Query: 328 ERKGAANAVRGGEYMYI 336
           ERKGA NAVRGGEYMY+
Sbjct: 297 ERKGAENAVRGGEYMYV 310

[Close]

BLAST of CmoCh01G017400 vs. TAIR10
Match: AT3G02340.1 (AT3G02340.1 RING/U-box superfamily protein)

HSP 1 Score: 95.9 bits (237), Expect = 5.0e-20
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 1


Query: 198 DNNNNSENTTDFL--QTFMDLETVSGPPKVPPASKEVVEKLPVITITEEVLAKLGRDVQC 257
           D N++     D +  Q F D   + G P   PA+K V++ LPV+ +  E L K G +V C
Sbjct: 281 DENHSGHYDADAILGQMFDDETGIRGNP---PAAKSVIQDLPVVELAVEELDK-GNNV-C 340

Query: 258 AICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWKEREKE 317
           A+C++ + V++K++ LPC H +H  C+ PWL   N+CP+CR+ELPTDD +Y    ER K 
Sbjct: 341 AVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDDLEY----ERHKS 400

Query: 318 AEEERKGAANAVRGGEY 333
           +E    G A  V  G Y
Sbjct: 401 SERGDTGLARNVLPGRY 408

[Close]

BLAST of CmoCh01G017400 vs. TAIR10
Match: AT5G15820.1 (AT5G15820.1 RING/U-box superfamily protein)

HSP 1 Score: 95.1 bits (235), Expect = 8.6e-20
Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 1


Query: 220 SGPPKVPPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHP 279
           +G    PPASK VV+ LP + +T E L+ +   + CAIC++ +   +K++ LPCKH +H 
Sbjct: 258 TGIKGTPPASKSVVDGLPDVELTIEELSSVS--IVCAICKDEVVFKEKVKRLPCKHYYHG 317

Query: 280 PCLKPWLDEHNSCPICRHELPTDDHKYE 308
            C+ PWL   N+CP+CRHELPTDD +YE
Sbjct: 318 ECIIPWLGIRNTCPVCRHELPTDDLEYE 343

[Close]

BLAST of CmoCh01G017400 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-19
Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 1


Query: 226 PPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPW 285
           PPASK  ++ LP + +T+++L       QCA+C +       ++++PCKH FH  CL PW
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMN--QCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPW 248

Query: 286 LDEHNSCPICRHELPTDDHKYES 309
           L+ HNSCP+CR ELPTDD  YE+
Sbjct: 249 LELHNSCPVCRFELPTDDPDYEN 269

[Close]

BLAST of CmoCh01G017400 vs. TAIR10
Match: AT5G01980.1 (AT5G01980.1 RING/U-box superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 9.5e-19
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 1


Query: 226 PPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPW 285
           PPAS   V  LP + I EE + K    + CAIC+E  ++ ++  +LPC H +H  C+ PW
Sbjct: 324 PPASVSCVRNLPRVIIAEEHVMK---GLVCAICKELFSLRNETTQLPCLHLYHAHCIVPW 383

Query: 286 LDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEYMYI 336
           L   NSCP+CR+ELPTDD  YE  K    +  E+   + +    GE  Y+
Sbjct: 384 LSARNSCPLCRYELPTDDKDYEEGKRNVLDVSEDSSSSDDGTESGEEEYV 430

[Close]

BLAST of CmoCh01G017400 vs. NCBI nr
Match: gi|1012331425|gb|KYP42901.1| (E3 ubiquitin-protein ligase CG7694 family [Cajanus cajan])

HSP 1 Score: 382.1 bits (980), Expect = 1.0e-102
Identity = 215/353 (60.91%), Postives = 246/353 (69.69%), Query Frame = 1


Query: 1   MESEDSLRSRLEELQKDLRKKQRFEEAVSTTISLLQDCYPTASPSLRKSFLISRSFECSI 60
           M+SED L+  LEELQK L KKQ+FE AVS+  SLLQ  YP+ASPSLRKSF        S+
Sbjct: 1   MDSEDLLKQELEELQKQLGKKQQFEAAVSSLKSLLQPIYPSASPSLRKSFY-------SV 60

Query: 61  SCEIVSYCYCSCGICNFREILLVSTSTFYSVICRVATVLKTRYTAPGFWCSGLKLFEVSL 120
            C                                VATVL+TRYTAPGFW +G+ LFE + 
Sbjct: 61  ICR-------------------------------VATVLRTRYTAPGFWNAGMDLFEQAH 120

Query: 121 SLVSDPSEKQQLQANIAHAKEILHQIDNPSSPSQ--------RYLFEGHLTVDPEPPQPQ 180
            LVS+PSEK+ L+A IA A+E LH  D+PS  SQ         YLFEGHLTVDPEPPQPQ
Sbjct: 121 LLVSEPSEKEHLKACIALAREHLHLEDDPSQASQPADNQANRGYLFEGHLTVDPEPPQPQ 180

Query: 181 WLVQSNLLTAAAATLFNAESSQAPVDNNNNSENTTDFLQTFMD-LETV---------SGP 240
           WL QSNLLT AAATLF AESSQA   N+   E+  + LQ  ++ LE V         +  
Sbjct: 181 WLAQSNLLT-AAATLFAAESSQASAANDTTQEDAANMLQDLINRLEEVVPLMVDGGGTVA 240

Query: 241 PKVPPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCL 300
           P+VPPASKEVV KLPVIT+TEE+LA LG+D +CAICRENL ++DKMQELPCKHTFHPPCL
Sbjct: 241 PRVPPASKEVVAKLPVITLTEEILANLGKDAECAICRENLVLNDKMQELPCKHTFHPPCL 300

Query: 301 KPWLDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEYMYI 336
           KPWLDEHNSCPICR+EL TDDH YESWKEREKEAEEERKGA NA+RGGEYMY+
Sbjct: 301 KPWLDEHNSCPICRYELQTDDHAYESWKEREKEAEEERKGAENAIRGGEYMYV 314

[Close]

BLAST of CmoCh01G017400 vs. NCBI nr
Match: gi|1009134567|ref|XP_015884518.1| (PREDICTED: E3 ubiquitin-protein ligase AIP2 [Ziziphus jujuba])

HSP 1 Score: 377.1 bits (967), Expect = 3.2e-101
Identity = 213/353 (60.34%), Postives = 248/353 (70.25%), Query Frame = 1


Query: 1   MESEDS-LRSRLEELQKDLRKKQRFEEAVSTTISLLQDCYPTASPSLRKSFLISRSFECS 60
           M+SE+S L+ RLEELQ+DL KK                 +  A  S++  FL        
Sbjct: 4   MDSEESNLKQRLEELQRDLGKK---------------QKFEDAVSSIKSLFL-------- 63

Query: 61  ISCEIVSYCYCSCGICNFREILLVSTSTFYSVICRVATVLKTRYTAPGFWCSGLKLFEVS 120
                  + Y S    + R++       FYSVICRVATVLKTRYT+PGFW +GL LFE +
Sbjct: 64  -------HRYSSASP-SLRKL-------FYSVICRVATVLKTRYTSPGFWAAGLGLFEQA 123

Query: 121 LSLVSDPSEKQQLQANIAHAKEILHQIDNPSSPSQR----YLFEGHLTVDPEPPQPQWLV 180
            SLV+D SEK  LQ+ IA AKE+LHQ+ NP  PS      YLFEGHLTVDPEPPQPQWLV
Sbjct: 124 QSLVTDASEKNHLQSCIAQAKEVLHQVHNPPEPSNPSNGGYLFEGHLTVDPEPPQPQWLV 183

Query: 181 QSNLLTAAAATLFNAESSQA----PVDNNNNSENTTDFLQTFMD---------LETVSGP 240
           Q+NLL AAA+ L NAESS +    PV+ +N+SEN T  LQ+ ++         LE   G 
Sbjct: 184 QANLLNAAAS-LSNAESSSSSSLGPVEQDNSSENATTLLQSLIENLDSVLPPILENERGA 243

Query: 241 PKVPPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCL 300
           P+VPPASKEVV KLPVITITEEVL KLG+D +CAIC+ENL V+DKMQELPCKHTFHPPCL
Sbjct: 244 PRVPPASKEVVAKLPVITITEEVLGKLGKDAECAICKENLVVNDKMQELPCKHTFHPPCL 303

Query: 301 KPWLDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEYMYI 336
           +PWLDEHNSCPICRHEL TDDH YESWKEREKEAEEERKGAANA+RGGEYMY+
Sbjct: 304 RPWLDEHNSCPICRHELQTDDHAYESWKEREKEAEEERKGAANAIRGGEYMYV 317

[Close]

BLAST of CmoCh01G017400 vs. NCBI nr
Match: gi|568841179|ref|XP_006474537.1| (PREDICTED: E3 ubiquitin-protein ligase AIP2 [Citrus sinensis])

HSP 1 Score: 367.1 bits (941), Expect = 3.3e-98
Identity = 183/265 (69.06%), Postives = 209/265 (78.87%), Query Frame = 1


Query: 88  FYSVICRVATVLKTRYTAPGFWCSGLKLFEVSLSLVSDPSEKQQLQANIAHAKEILHQID 147
           FYSV+CRVAT+LKTRYTAPGFW +GL+LFE++ SLVSDPS+KQ L+A IA AKE LH+ID
Sbjct: 50  FYSVVCRVATILKTRYTAPGFWLAGLRLFELAESLVSDPSQKQHLKACIAKAKEHLHEID 109

Query: 148 NPSSPSQR--------YLFEGHLTVDPEPPQPQWLVQSNLLTAAAATLFNAESSQAPVDN 207
           N    S+         YLFEGHLTVDPEPPQPQWLVQ+NL+ A A+   +AESS+   + 
Sbjct: 110 NAPEASEATYNTTNRGYLFEGHLTVDPEPPQPQWLVQANLMNAVASLSSSAESSRGLAER 169

Query: 208 NNNSENTTDFLQTFMD---------LETVSGPPKVPPASKEVVEKLPVITITEEVLAKLG 267
            NNSE   +  Q  ++         LET S  P+VPPASKEVV KLPVIT+TEE+L KLG
Sbjct: 170 INNSETVANLFQELVNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLG 229

Query: 268 RDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWK 327
            D +CAIC+ENL V DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL TDDH YESWK
Sbjct: 230 HDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWK 289

Query: 328 EREKEAEEERKGAANAVRGGEYMYI 336
           EREKEA+EERKGAANAVRGGEYMY+
Sbjct: 290 EREKEAQEERKGAANAVRGGEYMYV 314

[Close]

BLAST of CmoCh01G017400 vs. NCBI nr
Match: gi|641854899|gb|KDO73693.1| (hypothetical protein CISIN_1g021283mg [Citrus sinensis])

HSP 1 Score: 364.8 bits (935), Expect = 1.6e-97
Identity = 182/265 (68.68%), Postives = 208/265 (78.49%), Query Frame = 1


Query: 88  FYSVICRVATVLKTRYTAPGFWCSGLKLFEVSLSLVSDPSEKQQLQANIAHAKEILHQID 147
           FYSV+CRVAT+LKTRYTAPGFW +GL+LFE++ SLVSDPS+KQ L+A IA AKE LH+ID
Sbjct: 50  FYSVVCRVATILKTRYTAPGFWLAGLRLFELAESLVSDPSQKQHLKACIAKAKEHLHEID 109

Query: 148 NPSSPSQR--------YLFEGHLTVDPEPPQPQWLVQSNLLTAAAATLFNAESSQAPVDN 207
           N    S+         YLFEGHLTVDPEPPQPQWLVQ+NL+ A A+    AESS+   ++
Sbjct: 110 NAPEASEATYNTTNRGYLFEGHLTVDPEPPQPQWLVQANLMNAVASLSSTAESSRGLAES 169

Query: 208 NNNSENTTDFLQTFMD---------LETVSGPPKVPPASKEVVEKLPVITITEEVLAKLG 267
            N SE   +  Q  ++         LET S  P+VPPASKEVV KLPVIT+TEE+L KLG
Sbjct: 170 INTSETVANLFQELVNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLG 229

Query: 268 RDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWK 327
            D +CAIC+ENL V DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL TDDH YESWK
Sbjct: 230 HDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWK 289

Query: 328 EREKEAEEERKGAANAVRGGEYMYI 336
           EREKEA+EERKGAANAVRGGEYMY+
Sbjct: 290 EREKEAQEERKGAANAVRGGEYMYV 314

[Close]

BLAST of CmoCh01G017400 vs. NCBI nr
Match: gi|567921862|ref|XP_006452937.1| (hypothetical protein CICLE_v10008969mg [Citrus clementina])

HSP 1 Score: 364.8 bits (935), Expect = 1.6e-97
Identity = 182/265 (68.68%), Postives = 208/265 (78.49%), Query Frame = 1


Query: 88  FYSVICRVATVLKTRYTAPGFWCSGLKLFEVSLSLVSDPSEKQQLQANIAHAKEILHQID 147
           FYSV+CRVAT+LKTRYTAPGFW +GL+LFE++ SLVSDPS+KQ L+A IA AKE LH+ID
Sbjct: 50  FYSVVCRVATILKTRYTAPGFWLAGLRLFELAESLVSDPSQKQHLKACIAKAKEHLHEID 109

Query: 148 NPSSPSQR--------YLFEGHLTVDPEPPQPQWLVQSNLLTAAAATLFNAESSQAPVDN 207
           N    S+         YLFEGHLTVDPEPPQPQWLVQ+NL+ A A+    AESS+   ++
Sbjct: 110 NAPEASEATYNTTNRGYLFEGHLTVDPEPPQPQWLVQANLMNAVASLSSTAESSRGLAES 169

Query: 208 NNNSENTTDFLQTFMD---------LETVSGPPKVPPASKEVVEKLPVITITEEVLAKLG 267
            N SE   +  Q  ++         LET S  P+VPPASKEVV KLPVIT+TEE+L KLG
Sbjct: 170 INTSETVANLFQELVNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLG 229

Query: 268 RDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWK 327
            D +CAIC+ENL V DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL TDDH YESWK
Sbjct: 230 HDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWK 289

Query: 328 EREKEAEEERKGAANAVRGGEYMYI 336
           EREKEA+EERKGAANAVRGGEYMY+
Sbjct: 290 EREKEAQEERKGAANAVRGGEYMYV 314

The following BLAST results are available for this feature:

BLAST of CmoCh01G017400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AIP2_ARATH	2.5e-90	65.37	E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2 PE=1 SV=1	[more]
RING1_GOSHI	8.9e-19	50.00	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1	[more]
RNG1L_ARATH	2.6e-18	46.99	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1...	[more]
RN181_XENLA	4.4e-18	41.12	E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1	[more]
RN181_XENTR	5.8e-18	40.19	E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1	[more]

BLAST of CmoCh01G017400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A151RK20_CAJCA	6.9e-103	60.91	E3 ubiquitin-protein ligase CG7694 family OS=Cajanus cajan GN=KK1_035681 PE=4 SV...	[more]
V4UJ68_9ROSI	1.1e-97	68.68	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008969mg PE=4 SV=1	[more]
A0A067G2A8_CITSI	1.1e-97	68.68	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021283mg PE=4 SV=1	[more]
W9RHQ9_9ROSA	3.3e-97	58.69	E3 ubiquitin-protein ligase AIP2 OS=Morus notabilis GN=L484_018636 PE=4 SV=1	[more]
T2DNP9_PHAVU	2.2e-96	57.91	E3 ubiquitin-protein ligase AIP2-like isoform 1 OS=Phaseolus vulgaris GN=PHAVU_0...	[more]

BLAST of CmoCh01G017400 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20910.1	1.4e-91	65.37	RING/U-box superfamily protein	[more]
AT3G02340.1	5.0e-20	40.15	RING/U-box superfamily protein	[more]
AT5G15820.1	8.6e-20	47.73	RING/U-box superfamily protein	[more]
AT3G19950.1	1.5e-19	46.99	RING/U-box superfamily protein	[more]
AT5G01980.1	9.5e-19	40.00	RING/U-box superfamily protein	[more]

BLAST of CmoCh01G017400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1012331425\|gb\|KYP42901.1\|	1.0e-102	60.91	E3 ubiquitin-protein ligase CG7694 family [Cajanus cajan]	[more]
gi\|1009134567\|ref\|XP_015884518.1\|	3.2e-101	60.34	PREDICTED: E3 ubiquitin-protein ligase AIP2 [Ziziphus jujuba]	[more]
gi\|568841179\|ref\|XP_006474537.1\|	3.3e-98	69.06	PREDICTED: E3 ubiquitin-protein ligase AIP2 [Citrus sinensis]	[more]
gi\|641854899\|gb\|KDO73693.1\|	1.6e-97	68.68	hypothetical protein CISIN_1g021283mg [Citrus sinensis]	[more]
gi\|567921862\|ref\|XP_006452937.1\|	1.6e-97	68.68	hypothetical protein CICLE_v10008969mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009987	cellular process
biological_process	GO:0008152	metabolic process
biological_process	GO:0044699	single-organism process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0044424	intracellular part
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G017400.1	CmoCh01G017400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 254..296 score: 5.2
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 255..295 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 255..296 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 251..309 score: 9.1
None	No IPR available	unknown	Coil	Coil	coord: 306..326 score: -coord: 4..24 scor
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 174..331 score: 2.5
None	No IPR available	PANTHER	PTHR22763:SF50	E3 UBIQUITIN-PROTEIN LIGASE AIP2	coord: 174..331 score: 2.5
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 236..302 score: 5.98

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G017400	Cucsa.271240	Cucumber (Gy14) v1	cgycmoB0748
CmoCh01G017400	Cla002286	Watermelon (97103) v1	cmowmB424
CmoCh01G017400	Csa4G650180	Cucumber (Chinese Long) v2	cmocuB463
CmoCh01G017400	MELO3C016933	Melon (DHL92) v3.5.1	cmomeB424
CmoCh01G017400	ClCG05G015970	Watermelon (Charleston Gray)	cmowcgB413
CmoCh01G017400	CSPI04G25940	Wild cucumber (PI 183967)	cmocpiB467
CmoCh01G017400	Cp4.1LG02g05650	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G017400	MELO3C016933.2	Melon (DHL92) v3.6.1	cmomedB488
CmoCh01G017400	CsaV3_4G036260	Cucumber (Chinese Long) v3	cmocucB0553
CmoCh01G017400	Cla97C05G096940	Watermelon (97103) v2	cmowmbB462
CmoCh01G017400	Bhi09G002513	Wax gourd	cmowgoB0601
CmoCh01G017400	CsGy4G024240	Cucumber (Gy14) v2	cgybcmoB486
CmoCh01G017400	Carg10735	Silver-seed gourd	carcmoB1045

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G017400	Cucurbita moschata (Rifu)	cmocmoB020
CmoCh01G017400	Cucurbita maxima (Rimu)	cmacmoB050
CmoCh01G017400	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G017400	Watermelon (97103) v1	cmowmB435
CmoCh01G017400	Cucurbita pepo (Zucchini)	cmocpeB467
CmoCh01G017400	Bottle gourd (USVL1VR-Ls)	cmolsiB416
CmoCh01G017400	Silver-seed gourd	carcmoB0874