Cla002286 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCGGAGGATTCAGTGAGATTAAGATTGGAGGAATTGCACAAAGACTTGGGGAAGAAACAGAGATTCGAGGAAGCAGTTTCCACCATTATTTCTCTGCTTCAAGATCGCTATCCTACTGCTTCTCCTTCATTACGCAAATCGGTCTTTCATCTTTCTCCTCTTTTTGTTCAATTTTGTTGTCTCTTAATACTTCTCGATCTTTATTTCATTCCATTGTTCCATTTTGTGTGAATTTTTTCCCGTTATGTCTTTTTTTCCTGAGTGAAATTCATAATATGCGTAAAATCTTGGTGGTTTCTACTAGTATGGTGGTATATTCTTTCGTTTGAATCTGAATTTTTCTCTGTGGAGCTGAATTGTTGAAATATTCATTATTTGATGGCAGTTCTATTCCGTAATTTGCCGAGTTGCAACAGTATTGAAGACGAGGTTTACGGCCCCAGGGTTTTGGCTTTCTGGTCTTAAGCTTTTTCAATTTTCTTTGACTTTGCTCTCTGATCATTCAGAGAGACAACACCTGGAGGCTTGCCTAGCTCAGGCCAAGGAAATTCTTCACCAAATCGATAATCCATCTCCTGCTTCACAAAGTAATTCATCAAATGGAGGTACTAGTTAAGATGCATTCCTTTCCATACAAGCACACTTTTTAGTTTTTCATTAAATTAGTTGGCTCTTTGCTGATATGTATGAATTGAAATGTTCATATGTTGATTCAGGCTATCTTTTTGAGGGCCATCTCACTGTTGATCCAGAGCCACCCCAGCCCCAGTGGCTGGTGCAGTCAAACCTCTTGACAGCCGCTGCAGCTGCGCTATCTAATGCTGAATCTTCTCAAGGTCCAGCTGAGAACAGCAACACTTCTGAAAATGCTACTAATATTCTTCAAGCGCTTATTGAAAATCTAGATAACGCTGTAGATGGGGTAATGTTTGTTTCCTATTTCTCAGAGTACTTTCCTCATTCTTGTTTGAAAATTACTTGTTTAGAATATATATATATCATAACTACTAGTGGAGATTTTACCTGATATTGTATGAATTATGAAATATTGACTGTAAACTCCAATAATGTCTTTTCTTCCCCAGTTGATAGGAATAATTTGTGTGTTGGGTTTCAAATATCAAATTATTAACCAAACTCACTTATTTGCTTAAACTTTTGGTTTGAATGGGTATTTAACACTACTTTCTTCATGTCATACTCGGAGCAAATTTGTTATTTTTGTAATGGAGAGAAAATGAAGGATGTACATTGGATCAGTCTCATGGTTCAAGTTTGTATGAGTTGATTGTTGTTACCATTTCTATAAGATGTAGCACTTTGTGCCCATCCATTTAGATCAATGGCCCATATCCGTATAGATCAATAGTTCAATTTGTGGGATTTTGACATTGTTGGGTGGTGCTTGTTGGTACTGCTGTTGTTTTAAATGCTTGATGTGTGTTATTTTCTGTCTATTTAGTTCATGGACTTGGAAATGGCTAGCGGACCGCCAAGAGTCCCTCCTGCAAGTAAAGAAGTCGTCGCAAAACTTCCTGTAATTATGATAACTGATGAAGTTCTTGCCAAGCTAGGAAGAGATGTACAATGTGCTATTTGCAGGGAAAACTTGGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAACACACATTCCACCCACCTTGTTTGAAGCCCTGGCTGGTAATATGCTAACTTGATTAGTCTCTGTTAATGCTAAAAACTCAGCTCTTTTTTTTAGATTAAACGCATCCTATGCTTAAGCTCGTAAATTTTTTTAGGATGAGCATAACTCTTGTCCGATTTGTCGACATGAATTGCCCACCGACGACCACAAATACGAGAGCTGGAAGGAGCGAGAGAAAGAGGCCGAAGAAGAAAGAAAAGGAGCTGCAAATGCTGTTCGTGGTGGTGAATATATGTATATTTGA ATGGGATCGGAGGATTCAGTGAGATTAAGATTGGAGGAATTGCACAAAGACTTGGGGAAGAAACAGAGATTCGAGGAAGCAGTTTCCACCATTATTTCTCTGCTTCAAGATCGCTATCCTACTGCTTCTCCTTCATTACGCAAATCGTTCTATTCCGTAATTTGCCGAGTTGCAACAGTATTGAAGACGAGGTTTACGGCCCCAGGGTTTTGGCTTTCTGGTCTTAAGCTTTTTCAATTTTCTTTGACTTTGCTCTCTGATCATTCAGAGAGACAACACCTGGAGGCTTGCCTAGCTCAGGCCAAGGAAATTCTTCACCAAATCGATAATCCATCTCCTGCTTCACAAAGTAATTCATCAAATGGAGGCTATCTTTTTGAGGGCCATCTCACTGTTGATCCAGAGCCACCCCAGCCCCAGTGGCTGGTGCAGTCAAACCTCTTGACAGCCGCTGCAGCTGCGCTATCTAATGCTGAATCTTCTCAAGGTCCAGCTGAGAACAGCAACACTTCTGAAAATGCTACTAATATTCTTCAAGCGCTTATTGAAAATCTAGATAACGCTGTAGATGGGTTCATGGACTTGGAAATGGCTAGCGGACCGCCAAGAGTCCCTCCTGCAAGTAAAGAAGTCGTCGCAAAACTTCCTGTAATTATGATAACTGATGAAGTTCTTGCCAAGCTAGGAAGAGATGTACAATGTGCTATTTGCAGGGAAAACTTGGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAACACACATTCCACCCACCTTGTTTGAAGCCCTGGCTGGATGAGCATAACTCTTGTCCGATTTGTCGACATGAATTGCCCACCGACGACCACAAATACGAGAGCTGGAAGGAGCGAGAGAAAGAGGCCGAAGAAGAAAGAAAAGGAGCTGCAAATGCTGTTCGTGGTGGTGAATATATGTATATTTGA ATGGGATCGGAGGATTCAGTGAGATTAAGATTGGAGGAATTGCACAAAGACTTGGGGAAGAAACAGAGATTCGAGGAAGCAGTTTCCACCATTATTTCTCTGCTTCAAGATCGCTATCCTACTGCTTCTCCTTCATTACGCAAATCGTTCTATTCCGTAATTTGCCGAGTTGCAACAGTATTGAAGACGAGGTTTACGGCCCCAGGGTTTTGGCTTTCTGGTCTTAAGCTTTTTCAATTTTCTTTGACTTTGCTCTCTGATCATTCAGAGAGACAACACCTGGAGGCTTGCCTAGCTCAGGCCAAGGAAATTCTTCACCAAATCGATAATCCATCTCCTGCTTCACAAAGTAATTCATCAAATGGAGGCTATCTTTTTGAGGGCCATCTCACTGTTGATCCAGAGCCACCCCAGCCCCAGTGGCTGGTGCAGTCAAACCTCTTGACAGCCGCTGCAGCTGCGCTATCTAATGCTGAATCTTCTCAAGGTCCAGCTGAGAACAGCAACACTTCTGAAAATGCTACTAATATTCTTCAAGCGCTTATTGAAAATCTAGATAACGCTGTAGATGGGTTCATGGACTTGGAAATGGCTAGCGGACCGCCAAGAGTCCCTCCTGCAAGTAAAGAAGTCGTCGCAAAACTTCCTGTAATTATGATAACTGATGAAGTTCTTGCCAAGCTAGGAAGAGATGTACAATGTGCTATTTGCAGGGAAAACTTGGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAACACACATTCCACCCACCTTGTTTGAAGCCCTGGCTGGATGAGCATAACTCTTGTCCGATTTGTCGACATGAATTGCCCACCGACGACCACAAATACGAGAGCTGGAAGGAGCGAGAGAAAGAGGCCGAAGAAGAAAGAAAAGGAGCTGCAAATGCTGTTCGTGGTGGTGAATATATGTATATTTGA MGSEDSVRLRLEELHKDLGKKQRFEEAVSTIISLLQDRYPTASPSLRKSFYSVICRVATVLKTRFTAPGFWLSGLKLFQFSLTLLSDHSERQHLEACLAQAKEILHQIDNPSPASQSNSSNGGYLFEGHLTVDPEPPQPQWLVQSNLLTAAAAALSNAESSQGPAENSNTSENATNILQALIENLDNAVDGFMDLEMASGPPRVPPASKEVVAKLPVIMITDEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEYMYI
BLAST of Cla002286 vs. Swiss-Prot
Match: AIP2_ARATH (E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2 PE=1 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 6.4e-112 Identity = 198/312 (63.46%), Postives = 239/312 (76.60%), Query Frame = 1
BLAST of Cla002286 vs. Swiss-Prot
Match: RN181_DANRE (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 4.9e-19 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 1
BLAST of Cla002286 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.9e-18 Identity = 62/189 (32.80%), Postives = 86/189 (45.50%), Query Frame = 1
BLAST of Cla002286 vs. Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.2e-18 Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = 1
BLAST of Cla002286 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.2e-18 Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 1
BLAST of Cla002286 vs. TrEMBL
Match: A0A0A0L2Z0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G650180 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 2.4e-129 Identity = 228/314 (72.61%), Postives = 262/314 (83.44%), Query Frame = 1
BLAST of Cla002286 vs. TrEMBL
Match: V4UJ68_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008969mg PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 8.4e-127 Identity = 218/316 (68.99%), Postives = 266/316 (84.18%), Query Frame = 1
BLAST of Cla002286 vs. TrEMBL
Match: A0A067G2A8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021283mg PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 8.4e-127 Identity = 218/316 (68.99%), Postives = 266/316 (84.18%), Query Frame = 1
BLAST of Cla002286 vs. TrEMBL
Match: A0A0B0NE24_GOSAR (E3 ubiquitin-protein ligase AIP2-like protein OS=Gossypium arboreum GN=F383_11194 PE=4 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 3.0e-124 Identity = 221/312 (70.83%), Postives = 264/312 (84.62%), Query Frame = 1
BLAST of Cla002286 vs. TrEMBL
Match: A0A061GKP0_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_037426 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 1.6e-122 Identity = 219/312 (70.19%), Postives = 261/312 (83.65%), Query Frame = 1
BLAST of Cla002286 vs. NCBI nr
Match: gi|659104108|ref|XP_008452807.1| (PREDICTED: E3 ubiquitin-protein ligase AIP2 [Cucumis melo]) HSP 1 Score: 478.0 bits (1229), Expect = 1.3e-131 Identity = 232/315 (73.65%), Postives = 268/315 (85.08%), Query Frame = 1
BLAST of Cla002286 vs. NCBI nr
Match: gi|449447197|ref|XP_004141355.1| (PREDICTED: E3 ubiquitin-protein ligase AIP2 [Cucumis sativus]) HSP 1 Score: 469.9 bits (1208), Expect = 3.4e-129 Identity = 228/314 (72.61%), Postives = 262/314 (83.44%), Query Frame = 1
BLAST of Cla002286 vs. NCBI nr
Match: gi|1009134567|ref|XP_015884518.1| (PREDICTED: E3 ubiquitin-protein ligase AIP2 [Ziziphus jujuba]) HSP 1 Score: 467.6 bits (1202), Expect = 1.7e-128 Identity = 231/319 (72.41%), Postives = 270/319 (84.64%), Query Frame = 1
BLAST of Cla002286 vs. NCBI nr
Match: gi|641854899|gb|KDO73693.1| (hypothetical protein CISIN_1g021283mg [Citrus sinensis]) HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-126 Identity = 218/316 (68.99%), Postives = 266/316 (84.18%), Query Frame = 1
BLAST of Cla002286 vs. NCBI nr
Match: gi|567921862|ref|XP_006452937.1| (hypothetical protein CICLE_v10008969mg [Citrus clementina]) HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-126 Identity = 218/316 (68.99%), Postives = 266/316 (84.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |