CmoCh01G010580 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G010580
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRAN GTPase 3
LocationCmo_Chr01 : 8497567 .. 8504693 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTGATGTACCAATAAGGACGTTGGATCACAAACGGGGTGAATTTGGTGGGACATTGATTGGAGAAGTAACGTGTGCCAGCAAGGACGCTGGGCCCTAAAGGGGGTTTTTAAAGGACAATATTTGCTAGCGACCTGGGCCGTTACACTACAAGTACCTATTAATAATATAACTAAACAAGTCTTATTGAAATATAACATATTTTATTATTTATTACGTATTTAGCTCGAGGTATGTTCACTATTTAAGAATGGCAATTTCATCTCAAAACTAAGTAGTTTTTTTTATTAATGTCGATTAAGGATGTTACTGTCTAAAAACGAACTAGTTTAGATTATCTTTGATCCCATCACCCTGCTACAAGAATACACATTTGAATTTCGCGCCAATCACATTAGGCATGCAAGTCTAATGTGAAAGAAAACACGAGGTTTTAAAACTACGTGTCTTGAAGATGCATAGAACACAAAAAACAGTAGCTCAATGAACTCTAGATGGAATCGTGACAAACTTACTATGTGAACAAAGTAGGTGCAATATCTGGTTGAGTTGTAATAAGATAGACCAAGCTCCCAACAAGAGTATGATACAAACTAGGATTCGACAAATGAAGAGCATATACTAAAGAGTATTGTGTATTGATCTCAAGAGGAGTATCAACAATCTCGTTGTATTACCCAAAAAAAATCAGACAGCATCGCAAGGTAACTATGAAAATCGTACGTTTACCTGACAACTAATAGACATGAAACCAAAACAGAAAGACTATCAATAATTGAAAACCAACAAATATGAAAAATCTAATCAATCAAATTTAAGAACTCGTATGGATATGCAAACTCCTATGTCACACGTGCTAAAATCCTTAAATGGAAATGATTTCATCTCAAATAATTGTTCCAAATTTTTTATCGAAATGGGTGCTACAATTGAGTTTAGCTCTTCTCACTAATAGATTAATTTGGACAATATTAGGGGTGTACATGGTCGGTGTTTGATTGGGTTGATGAATTTTTTTTTACCCAACTCAAAAGTTATGGGTTGGTTAGATTGGTAACCCAACCCAAAATTTTCAAACCCAACCCTCTTTTCGGTTATCTGGTTGTTAAAAAAAAAAAAATTTCAAAAAAAAGTTTTATTTATTCACAATTTATAATTATTCGGTTATCCATTCGTGTTCAGACAAATGAACCCAACCCAACCCAACCCAAAATGCTAATCCAACCAACCCAACTCTTATATTTCGGGTTGGATTGGTTCGGATTGTCGAATTGTCAGGTTGAATGTATACTCCTAAGGTCTTTCAACAATAAACCTTTTTTGAGTAGCAGGGATCACATAATAGCACACCTGGGTTACTCCCGCATTGATATGTCATATTGGAAACTATTAGAAAATAGTCAACTAGTTCTTTAGTAATGAATTGCCTAGTGAGATTGGAGTCGTATACATCCTAGAGTTAGGATGATAGTGAAGGTGTCATGCTTCACCTTATCATGATTTGTATGACAATAGAGAAATGATTGAGAGCATAATTGATAAGACAACCTTAATTCTTAAGTCAATGATCCAAGCTTTTGTTGAATCAAGAATCATTAAATCATTAGATCAATCAATAGACAAGACCCGAATTAGATTACCTCTCAAAGTCAAACATAATCCAAACTTGATTGAATGGGTCGGATCTTGTGAGATCCCACATCAGTGGGAGAAGGAGAATGAATCATTTCTTATAAGGGTGTAGAAATCTATCCTAAGAGACGCATTTTAAAATACCGAGGGGAGGTCCTTGAAAGGAAAGCCCAAAGAGAACTCTGCTAATGGTGGGTTCGAGCGGTTATAAATAGTATCAGAGTCAAACACTGATCCTTGAAAGGAAAGCCTAAAGAGAACAATATCGTTCGAGCTGTTATAAATAGTATCAGAGTGAGACACGGGAGGATGTTGGGGTTACAAGAAAGGTGGAGTGTGAGATCGCACATTGGTTCGAGAGGGAACCAAACACATTTTAATACTTGGAAGGAAAGTCAAAGAGGAGAGTTTAATTAGAATAAAACCAACCATTGGATGGGTTGACTATCAATCCAACGGCAGTTGCAATATTGCAAAAATAGATTTGTTCTTACAGTATATCAATCAAAGGCGTCGGCACACTTTTCGAAATAAGAGTCGAGGAAGAGGATTCGGTGGGAAGCAAGCGAGTTCTAAATTCTGTCTGAAGAACAATTTCAAAGGCTTTTTCCTTCCCTCTCTACTCACTCAGTTTTTACTTTCCCTTTCCCTTTTCCTGTACTGGATTTGCTTTTTTCAAGGTATTTTGCTTCTTTCACTTCTAATGCTTTATTTCTGTTGATCGGGAAATTGATTGCGACTGAATTTGGGTTTTGTTGATGGTGGTTGATTAAGGTGGTTTTTTTCTGTGTTTCTGATGTCGTCGGCACCGTCTTCGAGTCAACCGGAGTTTGATTACTTGTTTAAGTTGCTGTTGATTGGGGACTCTGGAGTTGGGAAGAGTACGCTTCTTTTGCGATTCACTTCTGATTCATTTGAGGAACTTTCTCCAACTATTGGTATGACTGTGATTTCTTCTACTCTAATCGCGTCTTTGTAATCAATGGCTTGTGGCTTTCTTCGTTTGTTTATTTGAATCTGTCTCGAATGATCATTCAATTTAGCTTGAAGTTGTCTTGAATTCCAGAAGATGAAAGACTGAAGCCCTGTTTGATAGCGGTTACGATTGATTTTATAAACATTAGGTGTTTATTTATTTATTTTGTTTTGCTATCTAGTTTTTAGAAATGTTTTCAAACTCAACTTAGGAAGTTACTGAAAGTAGTTTTTCAATATATATATATTTTAAAAAAATTGGCTAAGAATTCAAATATATAGGTGAAAACATATGAAAGACTTGTTGGTGTTTTGAACTAAAAACTTTTATGCTAAGCCCACACCTACCAAAATGCTCTCAATCCTTCTAAAATTTTCCTGTTCTTCTCTAGTCAAATGTTCTACAGTATAGAGAAGGATAAAATAAGGAAAATGAAAGACATTAAATTCCCTGTTATCTTGTAAAGGCAGGTGAATGAACAATGGCTCTTCCATCATGGCTTGACACTATATGTTATGAACCAAATGCACATCTGAAGTCTCCAACAAACTGGCATGTGAATCAGTCAGTTCATAGATTCGATAAGGATCATGTTGTATGGATTGTTACCTCTAAAGTCTCCTACAGACTGTCCCAAATTGAATCTATGAACTGACAACTCAACATGACATGATCCATATCCTTAGAAGTACCCTTACGTAGCATGCTCTATTGAGGCCCCGTTAACATAAAATGATCTCTGGATAGAGTCAATAGTGTTAATCCTTTAGTGTCAGATTTGCCAATTGAAATTTTTTACCTTCTTTAGACTTCAACCTTCTAGAGCGAGTACTATAGAGATGGTGTGAGGAGGTGAGAATTGCACAAATGAGTAGAGTTGTACACAGGTTGAGTTGGAAATTTTTTGGACCAACCCGAAATTTCGGATTGGTCGGGTTGCCTACTAAAATGAATCAAATAGGGTTCACAACCCAACCCGACTCTCTATTTTCAGGTTGGTTCGCCGGCTTTTCAATTTTTTTTTAATTAATTTAAACAATCCTACTTATCCACGATATAGGTCACATTAATAGCTAAAATCTCTTAAGCTCATATATCAAACATCCACAAGTCACAATGCATCATTAACATCCACTATTGGTTTTCATCTTTGTAACAATTCTAGAAGTAGGGGTTAGGATGGGTTGGGTTAGGGAATTGGGTTGGTTTGGTTGACCCAACCAAAAAAATCCAACCCGCGAACCGAATCAGAATTTCGGTCCTCCAAAAATTCAAACCAAGCCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTCCGGTTTGGGTTGTTTGGGTAATCAAGTCATTCAAACACCCCTACAAACAAGAGATTAGATAACTATAGTAAAACTTAATGGATGATTAGGGGCAACAAACGAACATCAAAACCAGCCTAGCCAACATAGAGAGCAAAGAAGATACATTATAAGCTCCCTATTAGACAAGGGATGTCCAAAATTGGACAAAAGCCGCAAAGGCATATTATAGTGATGAAAGGTAACAAAGATGAAGGTAACATACGAAAACGAAACTATCCCCACCCTCCAATCCTCCCAACTAATTGAAGATCCTTTTTGTAACTCAGTTGGTTTTCTATTCAATATATTTCATTTACTTCAATGAAGTATTCTTTTGTTTCTTATAGAAAAAACAAAGAATCATATGATCTATTACTCATCTTGTTACATACTAAATGTAATTCTCTACATTTTTAGGTGTGGATTTCAAGATTAAGCATGTTACAGTTGGGGGAAAGAAGTTGAAGCTTGCAATATGGGACACAGGTGAAATCTTGCTGTTGTGTTTCATGTTATGCATGTGTATGAACATGATTGGGGAAAAACAATGGTGTCGTTTGATTTGTTTCTGTCCTCTTTTGGATTCACCCATTGTGTTATTGATCTGTATTTTAATTTCTACATTTTTGTTTTGAATGTTAGATATGCATTTAACATACTTTTTTTATGGATAAAGAAGTATGCATGAGAATTATTTATATTATAAAACCTTAGTACTGGCTTATTGAGTCAGTTTGCTTCAACCTTAACATGCTTTTCCTATAAATGTTTAAATTATGAAATTGTAGGGGTTGGATTTACATATATCTGCTGACCTTGACAGTGACTGGGGGGTGTACCATGCACGTAACATTTCATTAATTGCATTGATCATCGTTTTTCTTTTCATATTATGAAATGTTGCAGTTTGAAATTCTAATTATATGATTTCGATAGATAAGGTAGTGGATTCTTATGCCCACTAACTGACTTAGTATCTTTGAAAATCTCATGCATGTAAAATTTTACTGGTTATCTTGTGGTATTATATTGTTGTTGGAAATTATTAGGAATAAGTAAAGGACATCCTCAAAGACGATTTCTGTTTTTCGATCTACGATTCCACTGATGACAAACAAAAAACCAGAAGCAGAGAAACAGAAACCATTGTAGAGTAGGGCTTAATTTAGTTTCTTTATGGTGCTAATTGGGGCTTGTTATGATAGCTGTTGAATATAAAAAAACTTTGGTCTTTGTAAGTAATCAGCTAAGACATGCAGTATGCTTTTCAAGTCTGTGTGATGTAGTTTGGCAGTGGTATACTAAGATAAAATTGATTTATGTAAGCGCATCCTCCACATCTTTACTTGAAAGTTCGAACTTTTATTCCGTAAGTGGCTACCTCCTATTATTAAGTGTATTTTGATGAGATTTGATCTAGTAAGCACATTTTCCATACCTTTATTTGAAGAAAATTAAATTCTTTATTCCGTAGTATCTGTCTACTTTATTTTATTTTTTATTGTTATTTAAATGTTCTCTATTTGCAGCTGGGCAGGAGAGGTTTCGAACATTAACAGGTTCATATTACAGAGGCGCTCAAGGAATCATTATGGGTATCTTCTTTTTATTTCATCACTTTCTATCTACAATTATAATATTGGCATGCTACCATTGCTCCACTTATGAAATCTTGTTCGGGTTTTTGAGCCTCAGAAAAGCTTCGATTTTAGGTTCAACTTTGGAACTTATGGCTTTTCCTAAACGTCTAGGGATGACTTGTTTTGATAAATTCTTAAGTCTTAATTACTTTTTCTATTATTCAATTAGCTCTTAAGTTAACCAAATACTGTTACAACCTAAAAATTTAGTGTATGATGTGACCCGCCGTGAGACATTCACAAATCTCTCTGACATATGGGCTAAAGAAATTGACCTGTACTCAACAAATCAGGATTGCATCAAGATGCTTGTTGGAAACAAAGTGGATAAGGTATGCCTTTAACTCTTACGAAATTCAGTAGTAACTAGTAACTACCCTGCCCTATTTAATTAACTATGGATTTGAATTAGTATGAATTAGTATGACTATCTGGTTTAATTAGTGCCATAGTTACTGAAGTAACCCAGTATATTCTATTGAGCTTGGTTTATTGGCTACAAATTGTTTATAATATTTTTCTTCTGTAAATCAATTAATCCTTATTCTTAGTTTTAGATATTTAAATTCGAGCGATCTTATCTTTCAGGAAAGTGAAAGGGTAGTCAGTAAAAAAGAGGGAATCGACTTTGCTCGAGAATATGGATGCCTATTTCTTGAATGTAGCGCAAAAACTCGAGTCAATGTGGAACAATGCTTTGATGAGCTTGTGTTAAAGGTGCGTGAAAACTTGAACCTCTTCTGCACTAATATGGACAGCATGAACCTCCTATATTAATGTCCAGTTGCTCTCAAGTTAGCCCAAGAGTGCAATTGTAAATTTTCAAGTTATTCAAATAGGCATTTAGCTTAGAAATGATTTTTATTAGGTAGAACCAAAACAAGAACCTATTCAAGAACATCTCAGAGTGTTTATAATTTGCCCCACCAATCCTCCATAAGCCATTCAGTAACTTGCTGCTCCAAAAATGTGTTTGCAGATTTTGGACACGCCCAGTCTTTTGGCTGATGGCTCAACAGGTTTGAAAAAGAACATCTTCAAAGAGAAACCTCCTCAAGAGAATGCTTCAGCCGGTGGCTGCTGCTCGTATTGATTTTATGTCATGGACTCCAGGAGCATCTTCATTTGGTTTTAGGATACTCGTTATGCTGTTATTCCATTTTAGCACACCCTTGAAGTCAAAAGGTTTATGTTCTTCAATCTTCCTTTTATGGATTATGAGTTCGTTGAGCTAGAATATCTGCCAGAGTTATTTGCACGTCTTCTTTTAGCCTTTGTTACTAGGTTGACAATCTATTGATTTACCATGAACTTGCAACTTCACAGATGGAAAAGGATCCAAAACCTTGGGAATCCTATCAATACTTCGGTTTCGAGACTGGGTTCTTTTAATTGTTTAGATATCCATCCCTTTCGTTTTTCACCTGCCATGTCTATATGCACGTTGGCAAATAGGGGATTATCTATGTGATTCACCCCGCTTGCTTGCATCTACGAATATTTGGACTAATTCCACTGCCTGTCCAATTGCCA

mRNA sequence

ATGAGGCTTTTTCCTTCCCTCTCTACTCACTCAGTTTTTACTTTCCCTTTCCCTTTTCCTGTACTGGATTTGCTTTTTTCAAGGTGGTTTTTTTCTGTGTTTCTGATGTCGTCGGCACCGTCTTCGAGTCAACCGGAGTTTGATTACTTGTTTAAGTTGCTGTTGATTGGGGACTCTGGAGTTGGGAAGAGTACGCTTCTTTTGCGATTCACTTCTGATTCATTTGAGGAACTTTCTCCAACTATTGGTGTGGATTTCAAGATTAAGCATGTTACAGTTGGGGGAAAGAAGTTGAAGCTTGCAATATGGGACACAGCTGGGCAGGAGAGGTTTCGAACATTAACAGGTTCATATTACAGAGGCGCTCAAGGAATCATTATGGTGTATGATGTGACCCGCCGTGAGACATTCACAAATCTCTCTGACATATGGGCTAAAGAAATTGACCTGTACTCAACAAATCAGGATTGCATCAAGATGCTTGTTGGAAACAAAGTGGATAAGGAAAGTGAAAGGGTAGTCAGTAAAAAAGAGGGAATCGACTTTGCTCGAGAATATGGATGCCTATTTCTTGAATGTAGCGCAAAAACTCGAGTCAATGTGGAACAATGCTTTGATGAGCTTGTGTTAAAGATTTTGGACACGCCCAGTCTTTTGGCTGATGGCTCAACAGGTTTGAAAAAGAACATCTTCAAAGAGAAACCTCCTCAAGAGAATGCTTCAGCCGGTGGCTGCTGCTCGTATTGATTTTATGTCATGGACTCCAGGAGCATCTTCATTTGGTTTTAGGATACTCGTTATGCTGTTATTCCATTTTAGCACACCCTTGAAGTCAAAAGGTTTATGTTCTTCAATCTTCCTTTTATGGATTATGAGTTCGTTGAGCTAGAATATCTGCCAGAGTTATTTGCACGTCTTCTTTTAGCCTTTGTTACTAGGTTGACAATCTATTGATTTACCATGAACTTGCAACTTCACAGATGGAAAAGGATCCAAAACCTTGGGAATCCTATCAATACTTCGGTTTCGAGACTGGGTTCTTTTAATTGTTTAGATATCCATCCCTTTCGTTTTTCACCTGCCATGTCTATATGCACGTTGGCAAATAGGGGATTATCTATGTGATTCACCCCGCTTGCTTGCATCTACGAATATTTGGACTAATTCCACTGCCTGTCCAATTGCCA

Coding sequence (CDS)

ATGAGGCTTTTTCCTTCCCTCTCTACTCACTCAGTTTTTACTTTCCCTTTCCCTTTTCCTGTACTGGATTTGCTTTTTTCAAGGTGGTTTTTTTCTGTGTTTCTGATGTCGTCGGCACCGTCTTCGAGTCAACCGGAGTTTGATTACTTGTTTAAGTTGCTGTTGATTGGGGACTCTGGAGTTGGGAAGAGTACGCTTCTTTTGCGATTCACTTCTGATTCATTTGAGGAACTTTCTCCAACTATTGGTGTGGATTTCAAGATTAAGCATGTTACAGTTGGGGGAAAGAAGTTGAAGCTTGCAATATGGGACACAGCTGGGCAGGAGAGGTTTCGAACATTAACAGGTTCATATTACAGAGGCGCTCAAGGAATCATTATGGTGTATGATGTGACCCGCCGTGAGACATTCACAAATCTCTCTGACATATGGGCTAAAGAAATTGACCTGTACTCAACAAATCAGGATTGCATCAAGATGCTTGTTGGAAACAAAGTGGATAAGGAAAGTGAAAGGGTAGTCAGTAAAAAAGAGGGAATCGACTTTGCTCGAGAATATGGATGCCTATTTCTTGAATGTAGCGCAAAAACTCGAGTCAATGTGGAACAATGCTTTGATGAGCTTGTGTTAAAGATTTTGGACACGCCCAGTCTTTTGGCTGATGGCTCAACAGGTTTGAAAAAGAACATCTTCAAAGAGAAACCTCCTCAAGAGAATGCTTCAGCCGGTGGCTGCTGCTCGTATTGA
Homology
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BLAST of CmoCh01G010580 vs. Swiss-Prot
Match: RABC1_ARATH (Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=1 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.8e-99
Identity = 176/208 (84.62%), Postives = 194/208 (93.27%), Query Frame = 1 

Query: 41  SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 100
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F++LSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 101 AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 160
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEIDLYSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 161 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 220
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 221 DGSTGLKKNIFKEKPPQ-ENASAGGCCS 248
           +GS+G KKNIFK+ P Q  + S+  CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

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BLAST of CmoCh01G010580 vs. Swiss-Prot
Match: RAC2A_ARATH (Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.0e-84
Identity = 146/207 (70.53%), Postives = 176/207 (85.02%), Query Frame = 1 

Query: 41  SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 100
           SS Q  +D  FK+LLIGDSGVGKS+LL+ F S S E+L+PTIGVDFKIK +TVGGK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKL 63

Query: 101 AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 160
            IWDTAGQERFRTLT SYYRGAQGII+VYDVTRRETFTNL D+W KEI+LYSTNQ+C++M
Sbjct: 64  TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRM 123

Query: 161 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 220
           LVGNKVD+ESER VS++EGI  A+E  C+FLECSA+TR NVEQCF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLE 183

Query: 221 DGSTGLKKNIFKEKPPQENASAGGCCS 248
           +GS+ +K+NI K+KP  +  +  GCCS
Sbjct: 184 EGSSAVKRNILKQKPEHQTNTQSGCCS 210

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BLAST of CmoCh01G010580 vs. Swiss-Prot
Match: RAC2B_ARATH (Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 6.5e-75
Identity = 137/207 (66.18%), Postives = 165/207 (79.71%), Query Frame = 1 

Query: 41  SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 100
           SS Q  +D  FK+LLIGDSGVGKS+LLL F S S E+L+PTIGVDFKIK + V GK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLKL 63

Query: 101 AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 160
            IWDTAGQE+FRTLT SY+RG+QGII+VYDVT+RETF NL+DIWAKEI+LYSTN DCIKM
Sbjct: 64  TIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKM 123

Query: 161 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 220
           LVGNKVD+ESER VS++EG+  A++  CLF ECSA+TR NV  CF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183

Query: 221 DGSTGLKKNIFKEKPPQENASAGGCCS 248
           +GS+ +K+       P   A  G CCS
Sbjct: 184 EGSSSVKRK------PDYRAHQGRCCS 204

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BLAST of CmoCh01G010580 vs. Swiss-Prot
Match: YPTV3_VOLCA (GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.7e-60
Identity = 114/179 (63.69%), Postives = 138/179 (77.09%), Query Frame = 1 

Query: 48  DYLFKLLLIGDSGVGKSTLLLRFTSDSFEE-LSPTIGVDFKIKHVTVGGKKLKLAIWDTA 107
           DY FK+LL+GDSGVGKS +L RFTS  FEE  + TIGVDFK+K++T  GK+ KL IWDTA
Sbjct: 7   DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTA 66

Query: 108 GQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 167
           GQERFRTLT SYYRGAQGII VYDVTRR+TF +L   W +E D+YST +  IKM+V NKV
Sbjct: 67  GQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKV 126

Query: 168 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTG 226
           D  ++R VS +EG DFAR +GCLF+E SA+  + V Q F+EL+LKILDTP LL   + G
Sbjct: 127 DLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAVG 185

[Close]
BLAST of CmoCh01G010580 vs. Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-56
Identity = 112/197 (56.85%), Postives = 144/197 (73.10%), Query Frame = 1 

Query: 52  KLLLIGDSGVGKSTLLLRFTSDSFE-ELSPTIGVDFKIKHVTVGGKKLKLAIWDTAGQER 111
           K+L+IG+SGVGKS+LLLRFT D+F+ EL+ TIGVDFK+K + + G + KLAIWDTAGQER
Sbjct: 10  KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQER 69

Query: 112 FRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKES 171
           FRTLT SYYRGAQG+I+VYDVT+R+TFT L + W  E++ Y T  D +KMLVGNK+DK++
Sbjct: 70  FRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDKDN 129

Query: 172 ERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTGLKKNI 231
            R V + EG+ FAR++  LF+E SAKTR  V+  F+ELV KIL TP L  + S       
Sbjct: 130 -REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLW-ESSIQNHGVQ 189

Query: 232 FKEKPPQENASAGGCCS 248
             +  PQ   + GG CS
Sbjct: 190 LSDNEPQRQGACGGYCS 203

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BLAST of CmoCh01G010580 vs. TrEMBL
Match: A0A0A0KH59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G395140 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 5.3e-116
Identity = 208/213 (97.65%), Postives = 210/213 (98.59%), Query Frame = 1 

Query: 36  MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 95
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 96  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 155
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 156 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 215
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 216 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 249
           PSLLADGSTGLKKNIFKEKPP+   SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213

[Close]
BLAST of CmoCh01G010580 vs. TrEMBL
Match: A0A097BTY5_CITLA (RAS-related protein RABC1 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 2.0e-115
Identity = 209/214 (97.66%), Postives = 212/214 (99.07%), Query Frame = 1 

Query: 36  MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 95
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 96  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 155
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 156 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 215
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 216 PSLLADGSTGLKKNIFKEKPPQEN-ASAGGCCSY 249
           PSLLADGSTGLKKNIFKEKPP+ N +SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETNSSSAGGCCSY 214

[Close]
BLAST of CmoCh01G010580 vs. TrEMBL
Match: A0A0B2QSG5_GLYSO (Ras-related protein RABC1 OS=Glycine soja GN=glysoja_043725 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.7e-106
Identity = 188/212 (88.68%), Postives = 205/212 (96.70%), Query Frame = 1 

Query: 37  SSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGK 96
           SS+ SS+QPEFDYLFKLLLIGDSGVGKSTLLL FTSD+FE+LSPTIGVDFK+K+VT+GGK
Sbjct: 4   SSSSSSTQPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTMGGK 63

Query: 97  KLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 156
           KLKLAIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD
Sbjct: 64  KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 123

Query: 157 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTP 216
           CIKMLVGNKVDKESERVVSKKEGIDFAREYGCL+ ECSAKTRVNV QCFDELV+KIL+TP
Sbjct: 124 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVAQCFDELVMKILETP 183

Query: 217 SLLADGSTGLKKNIFKEKPPQENASAGGCCSY 249
           SLLA+GS+G+KKNIFK+KPPQ +AS+ GCCS+
Sbjct: 184 SLLAEGSSGVKKNIFKQKPPQSDASSSGCCSW 215

[Close]
BLAST of CmoCh01G010580 vs. TrEMBL
Match: I1LXB2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G036800 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.7e-106
Identity = 188/212 (88.68%), Postives = 205/212 (96.70%), Query Frame = 1 

Query: 37  SSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGK 96
           SS+ SS+QPEFDYLFKLLLIGDSGVGKSTLLL FTSD+FE+LSPTIGVDFK+K+VT+GGK
Sbjct: 4   SSSSSSTQPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTMGGK 63

Query: 97  KLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 156
           KLKLAIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD
Sbjct: 64  KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 123

Query: 157 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTP 216
           CIKMLVGNKVDKESERVVSKKEGIDFAREYGCL+ ECSAKTRVNV QCFDELV+KIL+TP
Sbjct: 124 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVAQCFDELVMKILETP 183

Query: 217 SLLADGSTGLKKNIFKEKPPQENASAGGCCSY 249
           SLLA+GS+G+KKNIFK+KPPQ +AS+ GCCS+
Sbjct: 184 SLLAEGSSGVKKNIFKQKPPQSDASSSGCCSW 215

[Close]
BLAST of CmoCh01G010580 vs. TrEMBL
Match: A0A151U1X5_CAJCA (GTP-binding protein yptV3 OS=Cajanus cajan GN=KK1_005871 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 6.5e-106
Identity = 187/212 (88.21%), Postives = 204/212 (96.23%), Query Frame = 1 

Query: 37  SSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGK 96
           +S+ SS+QPEFDYLFKLLLIGDSGVGKSTLLL FTSD+FE+LSPTIGVDFK+K+VT+GGK
Sbjct: 3   ASSSSSTQPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTIGGK 62

Query: 97  KLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 156
           KLKLAIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEIDLYSTNQD
Sbjct: 63  KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQD 122

Query: 157 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTP 216
           CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLF ECSAKTRVNV QCFDELV+KIL+TP
Sbjct: 123 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFTECSAKTRVNVGQCFDELVMKILETP 182

Query: 217 SLLADGSTGLKKNIFKEKPPQENASAGGCCSY 249
           SLLA+GS+G+KKNIFK+K PQ +AS+ GCCSY
Sbjct: 183 SLLAEGSSGVKKNIFKQKAPQSDASSSGCCSY 214

[Close]
BLAST of CmoCh01G010580 vs. TAIR10
Match: AT1G43890.1 (AT1G43890.1 RAB GTPASE HOMOLOG B18)

HSP 1 Score: 362.5 bits (929), Expect = 2.1e-100
Identity = 176/208 (84.62%), Postives = 194/208 (93.27%), Query Frame = 1 

Query: 41  SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 100
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F++LSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 101 AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 160
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEIDLYSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 161 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 220
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 221 DGSTGLKKNIFKEKPPQ-ENASAGGCCS 248
           +GS+G KKNIFK+ P Q  + S+  CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]
BLAST of CmoCh01G010580 vs. TAIR10
Match: AT5G03530.1 (AT5G03530.1 RAB GTPase homolog C2A)

HSP 1 Score: 313.5 bits (802), Expect = 1.1e-85
Identity = 146/207 (70.53%), Postives = 176/207 (85.02%), Query Frame = 1 

Query: 41  SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 100
           SS Q  +D  FK+LLIGDSGVGKS+LL+ F S S E+L+PTIGVDFKIK +TVGGK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKL 63

Query: 101 AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 160
            IWDTAGQERFRTLT SYYRGAQGII+VYDVTRRETFTNL D+W KEI+LYSTNQ+C++M
Sbjct: 64  TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRM 123

Query: 161 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 220
           LVGNKVD+ESER VS++EGI  A+E  C+FLECSA+TR NVEQCF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLE 183

Query: 221 DGSTGLKKNIFKEKPPQENASAGGCCS 248
           +GS+ +K+NI K+KP  +  +  GCCS
Sbjct: 184 EGSSAVKRNILKQKPEHQTNTQSGCCS 210

[Close]
BLAST of CmoCh01G010580 vs. TAIR10
Match: AT3G09910.1 (AT3G09910.1 RAB GTPase homolog C2B)

HSP 1 Score: 282.0 bits (720), Expect = 3.7e-76
Identity = 137/207 (66.18%), Postives = 165/207 (79.71%), Query Frame = 1 

Query: 41  SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 100
           SS Q  +D  FK+LLIGDSGVGKS+LLL F S S E+L+PTIGVDFKIK + V GK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLKL 63

Query: 101 AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 160
            IWDTAGQE+FRTLT SY+RG+QGII+VYDVT+RETF NL+DIWAKEI+LYSTN DCIKM
Sbjct: 64  TIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKM 123

Query: 161 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 220
           LVGNKVD+ESER VS++EG+  A++  CLF ECSA+TR NV  CF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183

Query: 221 DGSTGLKKNIFKEKPPQENASAGGCCS 248
           +GS+ +K+       P   A  G CCS
Sbjct: 184 EGSSSVKRK------PDYRAHQGRCCS 204

[Close]
BLAST of CmoCh01G010580 vs. TAIR10
Match: AT4G17530.1 (AT4G17530.1 RAB GTPase homolog 1C)

HSP 1 Score: 187.6 bits (475), Expect = 9.4e-48
Identity = 107/204 (52.45%), Postives = 129/204 (63.24%), Query Frame = 1 

Query: 45  PEFDYLFKLLLIGDSGVGKSTLLLRFTSDSF-EELSPTIGVDFKIKHVTVGGKKLKLAIW 104
           PE+DYLFKLLLIGDSGVGKS LLLRF  DS+ +    TIGVDFKI+ V   GK +KL IW
Sbjct: 3   PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIW 62

Query: 105 DTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 164
           DTAGQERFRT+T SYYRGA GII+ YDVT  E+F N+   W  EID Y+ +++  K+LVG
Sbjct: 63  DTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYA-SENVNKLLVG 122

Query: 165 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGS 224
           NK D  S++VVS +    FA E G  FLE SAK   NVE+ F  +   I    + +A   
Sbjct: 123 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI---KTRMASQP 182

Query: 225 TGLKKNIFKEKPPQENASAGGCCS 248
            G  K    +   Q      GCCS
Sbjct: 183 AGGSKPPTVQIRGQPVNQQSGCCS 201

[Close]
BLAST of CmoCh01G010580 vs. TAIR10
Match: AT1G02130.1 (AT1G02130.1 RAS 5)

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-47
Identity = 105/204 (51.47%), Postives = 128/204 (62.75%), Query Frame = 1 

Query: 45  PEFDYLFKLLLIGDSGVGKSTLLLRFTSDSF-EELSPTIGVDFKIKHVTVGGKKLKLAIW 104
           PE+DYLFKLLLIGDSGVGKS LLLRF+ DS+ E    TIGVDFKI+ V   GK +KL IW
Sbjct: 3   PEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIW 62

Query: 105 DTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 164
           DTAGQERFRT+T SYYRGA GII+VYDVT  E+F N+   W  EID Y+++ +  K+LVG
Sbjct: 63  DTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVG 122

Query: 165 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGS 224
           NK D    R +  +    FA E G  F+E SAK   NVEQ F  +   I +  +    G+
Sbjct: 123 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 182

Query: 225 TGLKKNIFKEKPPQENASAGGCCS 248
                 +  +   Q  A   GCCS
Sbjct: 183 NARPPTV--QIRGQPVAQKNGCCS 202

[Close]
BLAST of CmoCh01G010580 vs. NCBI nr
Match: gi|449458101|ref|XP_004146786.1| (PREDICTED: ras-related protein RABC1 isoform X1 [Cucumis sativus])

HSP 1 Score: 425.2 bits (1092), Expect = 7.6e-116
Identity = 208/213 (97.65%), Postives = 210/213 (98.59%), Query Frame = 1 

Query: 36  MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 95
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 96  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 155
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 156 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 215
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 216 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 249
           PSLLADGSTGLKKNIFKEKPP+   SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213

[Close]
BLAST of CmoCh01G010580 vs. NCBI nr
Match: gi|659089996|ref|XP_008445776.1| (PREDICTED: ras-related protein RABC1 isoform X1 [Cucumis melo])

HSP 1 Score: 424.1 bits (1089), Expect = 1.7e-115
Identity = 207/213 (97.18%), Postives = 210/213 (98.59%), Query Frame = 1 

Query: 36  MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 95
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 96  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 155
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 156 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 215
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 216 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 249
           PSLLADGSTGLKKNIFKEKPP+   +AGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTTAGGCCSY 213

[Close]
BLAST of CmoCh01G010580 vs. NCBI nr
Match: gi|694188373|gb|AIS71927.1| (RAS-related protein RABC1 [Citrullus lanatus])

HSP 1 Score: 423.3 bits (1087), Expect = 2.9e-115
Identity = 209/214 (97.66%), Postives = 212/214 (99.07%), Query Frame = 1 

Query: 36  MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 95
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 96  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 155
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 156 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 215
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 216 PSLLADGSTGLKKNIFKEKPPQEN-ASAGGCCSY 249
           PSLLADGSTGLKKNIFKEKPP+ N +SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETNSSSAGGCCSY 214

[Close]
BLAST of CmoCh01G010580 vs. NCBI nr
Match: gi|734384725|gb|KHN24355.1| (Ras-related protein RABC1 [Glycine soja])

HSP 1 Score: 393.7 bits (1010), Expect = 2.5e-106
Identity = 188/212 (88.68%), Postives = 205/212 (96.70%), Query Frame = 1 

Query: 37  SSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGK 96
           SS+ SS+QPEFDYLFKLLLIGDSGVGKSTLLL FTSD+FE+LSPTIGVDFK+K+VT+GGK
Sbjct: 4   SSSSSSTQPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTMGGK 63

Query: 97  KLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 156
           KLKLAIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD
Sbjct: 64  KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 123

Query: 157 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTP 216
           CIKMLVGNKVDKESERVVSKKEGIDFAREYGCL+ ECSAKTRVNV QCFDELV+KIL+TP
Sbjct: 124 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVAQCFDELVMKILETP 183

Query: 217 SLLADGSTGLKKNIFKEKPPQENASAGGCCSY 249
           SLLA+GS+G+KKNIFK+KPPQ +AS+ GCCS+
Sbjct: 184 SLLAEGSSGVKKNIFKQKPPQSDASSSGCCSW 215

[Close]
BLAST of CmoCh01G010580 vs. NCBI nr
Match: gi|359806090|ref|NP_001241441.1| (uncharacterized protein LOC100794330 [Glycine max])

HSP 1 Score: 391.7 bits (1005), Expect = 9.3e-106
Identity = 187/212 (88.21%), Postives = 204/212 (96.23%), Query Frame = 1 

Query: 37  SSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGK 96
           +S+ SSSQPEFDYLFKLLLIGDSGVGKSTLLL FTSD+FE+LSPTIGVDFK+K+VT+GGK
Sbjct: 3   ASSSSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTIGGK 62

Query: 97  KLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 156
           KLKLAIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD
Sbjct: 63  KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 122

Query: 157 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTP 216
           CIKMLVGNKVDKESERVVSKKEGIDFAREYGCL+ ECSAKTRVNV QCFDELV+KIL+TP
Sbjct: 123 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVTQCFDELVMKILETP 182

Query: 217 SLLADGSTGLKKNIFKEKPPQENASAGGCCSY 249
           SLLA+GS+G+KKNIFK+KPP  +AS+ GCCS+
Sbjct: 183 SLLAEGSSGVKKNIFKQKPPLSDASSSGCCSW 214

The following BLAST results are available for this feature:
BLAST of CmoCh01G010580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RABC1_ARATH3.8e-9984.62Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=1 SV=1[more]
RAC2A_ARATH2.0e-8470.53Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1 SV=1[more]
RAC2B_ARATH6.5e-7566.18Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2 SV=1[more]
YPTV3_VOLCA7.7e-6063.69GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1[more]
RB18B_DANRE2.3e-5656.85Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1[more]
BLAST of CmoCh01G010580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KH59_CUCSA5.3e-11697.65Uncharacterized protein OS=Cucumis sativus GN=Csa_6G395140 PE=4 SV=1[more]
A0A097BTY5_CITLA2.0e-11597.66RAS-related protein RABC1 OS=Citrullus lanatus PE=2 SV=1[more]
A0A0B2QSG5_GLYSO1.7e-10688.68Ras-related protein RABC1 OS=Glycine soja GN=glysoja_043725 PE=4 SV=1[more]
I1LXB2_SOYBN1.7e-10688.68Uncharacterized protein OS=Glycine max GN=GLYMA_13G036800 PE=4 SV=1[more]
A0A151U1X5_CAJCA6.5e-10688.21GTP-binding protein yptV3 OS=Cajanus cajan GN=KK1_005871 PE=4 SV=1[more]
BLAST of CmoCh01G010580 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G43890.12.1e-10084.62 RAB GTPASE HOMOLOG B18[more]
AT5G03530.11.1e-8570.53 RAB GTPase homolog C2A[more]
AT3G09910.13.7e-7666.18 RAB GTPase homolog C2B[more]
AT4G17530.19.4e-4852.45 RAB GTPase homolog 1C[more]
AT1G02130.11.6e-4751.47 RAS 5[more]
BLAST of CmoCh01G010580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458101|ref|XP_004146786.1|7.6e-11697.65PREDICTED: ras-related protein RABC1 isoform X1 [Cucumis sativus][more]
gi|659089996|ref|XP_008445776.1|1.7e-11597.18PREDICTED: ras-related protein RABC1 isoform X1 [Cucumis melo][more]
gi|694188373|gb|AIS71927.1|2.9e-11597.66RAS-related protein RABC1 [Citrullus lanatus][more]
gi|734384725|gb|KHN24355.1|2.5e-10688.68Ras-related protein RABC1 [Glycine soja][more]
gi|359806090|ref|NP_001241441.1|9.3e-10688.21uncharacterized protein LOC100794330 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008152 metabolic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G010580.1CmoCh01G010580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 52..213
score: 7.3
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 49..208
score: 3.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 42..246
score: 3.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 46..220
score: 2.94
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 190..212
score: 5.1E-38coord: 91..113
score: 5.1E-38coord: 73..89
score: 5.1E-38coord: 51..72
score: 5.1E-38coord: 155..168
score: 5.1
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 43..248
score: 1.9E
NoneNo IPR availablePANTHERPTHR24073:SF598SUBFAMILY NOT NAMEDcoord: 43..248
score: 1.9E
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 48..215
score: 2.5
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 53..215
score: 1.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 51..215
score: 2.4
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 56..248
score: 1.
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 39..216
score: 0.
NoneNo IPR availablePROFILEPS51419RABcoord: 46..246
score: 33

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G010580CmaCh01G010160Cucurbita maxima (Rimu)cmacmoB468
CmoCh01G010580MELO3C011704Melon (DHL92) v3.5.1cmomeB404
CmoCh01G010580Lsi08G002830Bottle gourd (USVL1VR-Ls)cmolsiB444
CmoCh01G010580Cp4.1LG02g00110Cucurbita pepo (Zucchini)cmocpeB447
CmoCh01G010580MELO3C011704.2Melon (DHL92) v3.6.1cmomedB463
CmoCh01G010580Bhi04G001701Wax gourdcmowgoB0567
CmoCh01G010580Carg26862Silver-seed gourdcarcmoB0861
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G010580Cucurbita moschata (Rifu)cmocmoB018
CmoCh01G010580Cucurbita moschata (Rifu)cmocmoB367
CmoCh01G010580Cucurbita maxima (Rimu)cmacmoB048
CmoCh01G010580Cucurbita pepo (Zucchini)cmocpeB448
CmoCh01G010580Cucurbita pepo (Zucchini)cmocpeB464
CmoCh01G010580Silver-seed gourdcarcmoB0093
CmoCh01G010580Silver-seed gourdcarcmoB0822