Carg26862 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26862
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ras-related protein
Location	Cucurbita_argyrosperma_scaffold_233 : 76406 .. 81504 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATAGATTTGTTCGTACTGTATATCAATCAAAGGCGTCGGCACACTTTTCGAAATAAGAGTTGAGGAAGAGGATTCGGTGGGAAGCAAGCGAGTTCTAAATTCTGTCTGAAGAACACTTTCAAAGGCTTTTTCCTTCCCTCTCTACTCACTCAGTTTCTACTTTCCCTTTCCCTTTTCCTGTACTGGATTTGCTTTTTTCAAGGTATTTTGCTTCTTTCACTTCTAATGTTTTATTTGTGTTGATCGGGAAATTGATTGCGACTGAATTTGGTTTTTGTTGATGGTGGTTGATTAAGGTGTTTTTTTCTGTGTTTCTGATGTCGTCGGCACCGTCTTCGAGTCAACCGGAGTTTGATTACTTGTTTAAGTTGCTGTTGATTGGGGACTCTGGAGTTGGGAAGAGTACGCTTCTTTTGCGATTCACTTCTGATTCATTTGAGGAACTTTCTCCAACTATTGGTATGACTGTGATTTCTTCTACTCTAATCGCGTCTTTGTAATCAATGGCTTGTGGCTTTCTTCGTTTGTTTATTTGAATCTGTCTCGAATGATCATTCAATTTAGCTTGAAGTTGTCTTGAATTCCAGAAGATGAAAGACTGAAGCCCTGTTTGATAGCGGTTACGATTGATTTTATAAACATTAGGTGTTTGTTTATTTATTTTGTTTTGCTATCTAGTTTTTAGAAATGTTTTCAAACTCAACTTAGGAAGTTACTGAAATTTAAAAATTGGCTAAGAATTCAAATATGTAGGTGAAAACATATGAAAGACTTGTTGGTGTTTTGAACTAAAAACTTTTATGCTAAGCCCACACCTCCCAAAATGCTCTCAATCCTTCTAAAATTTTCCTGTTCTTCTCTAGTCAAATGTTCTACAGTATAGAGAAGGATAAAAAATGGAAAATGAAAGACATTAAATTCCCTGTTATCTTGTAAAGGCAGGTGAATGAACAATGGCTCTTCCATCATGGCTTGACACTATATGTTATGAACCAAATGCACATCTGAAGTCTCCAACAAACTGGCATGTGAATCAGTCAGTTCATAGATTCGATAAGGATCATGTTGTATGGATTGTTACCTCTAAAGTCTCCTACAGTCTGTCCCAAATTGAATCTATGAACTGACAACTCCACATGACATGATCCATATCCTTAGAAGTACCCTTACGTAGCATGCTCTATTGAGGCCCCGTTAACATAAAATGATCTCTGGATAGAGTCAATAGTGTTAATCCTTTAGTGTCAGATTTGCCAGTTGAAATGTTTTACCTTCTTTACACTTCAACCTTCTAGAGCGAGTACTATAGAGATGGTGTGAGGAGGTGAGAATTGCACAAAAGAGTAGAGTTGTACACGGGTTGAGTTGGAAATTTTTTGGACCAACCCGAAATTCCGGGTTGGTCGGGTTGCCTACTAAAATGAGTCAAATAGGGTTCACAACCCAACCCAACCTAACTCTTTATTTTCAGGTTGGTTCGCCGGCATTTCAAATTCTTTTTAATTAATTTAAAAAATCCTGCTTATCCACAATATATGTCACATTAATAGCTAAAATCTCTTAAGCTCATTATCGAACATCCACAAGTCAAAATGCATCATTAACATCTACTATTGGTCTTCATCTTTGTAACAATTCTAGAGAAGTAGGGGTTAGGATGGGTTGGGTTAGGGAATTGGGTTGGTTTGGTTGATCCAACCAAAAAAATCCAACCTGCGAACCGAATCAGAATTTCGGTCCTCCAAAAATTCAAACCAAGCCAAATTAAAAAAAATAATAATAATAAATAAATAAATAAATTAACTTCCGGTTTGGGTCGGATAGTTTGGGTTGTTTGGGTAATCGAGTCATTCGAACACCCCAACAAACGAGAGATTAGATAACTATAGTAAAACTTAATGGATGATTAGGGGTAACAAACGAACATCAAAACCAACCTAGCCGACATAGAGAGCAAAGAAGATACATTATAAGCTCCCTATTAGACAAGGCATGTCCAAAATTGGACAAAAGCCGCAAACGCATATTATAGTGATGAAAGGTAACAAAGACGAAGGTAACATACGGAAACGAAACTATCCCCACCCTCCAATCCTCCTAACTAATTGAAGATCATTTTTGTAACTCATTTGGTTTTCTATTCAATATATTTCATTTACTTCAATGAAGTATTCTTTTGTTTCTTATAGAAAAAAAAAAAAAAAATCATCTTGTTACATACTAAATGTAATTCTCTACATAATTTTTAGGTGTGGATTTCAAGATTAAGCATGTTACAGTTGGAGGAAAGAAGTTGAAGCTTGCAATATGGGACACAGGTGAAATCTTGCTGTTGTGTTTCATGTTATGCATGTGTATGAACATGATTGGGGAAAAACAATGGTGTCGTTTGATTTGTTTCTGTCCTCTTTTGGATTCACCCATTGTGTTATTGATCTGTATTTTAATTTCTACATTTTTGTTTTGAATGTTAGATATGCATTTAACATACTTTTTTTTATGGATAAAGAAGTATGCATGAGAATTATTTATTTTATAAAACCTTAGTACTGGCTTATTAAGTCAGTTTGCTTCAACCTTAACATGCTTTTCCTATAAATGTTTAAATTATGAAATTGTAGGGGTTGGATTTACATATATCTATTGACCTTGACAGTGTCTGGGGGGTGTACCATGCACGTAAAATTTCATTAATTGCATTGATCATCGGTTTTCTTTTCATATTATAAAATGTTGCAGTTTGAAATTTTAGTTATATGATTTCGATAGATAAGGTAGTGGATTCTTATGCCCACCAACTGACTTAGTATCTTTGAAAATCTCATGCATGTAAAATTTTACTGGTTATCTTGTGGTATTATATTGTTGTTGGAAATTATTAGGAACAAGTAAAGGACATCCTCAAAGACGATTTCTGTTTTTCAATCTACGATTTCACTGATGACAAACAAAAAACCTGAAGCAGAGAAACAAAAACCATTGTAGAGTAGGGATTAATTTAGTTTCTTTATGGTGCTACTTAGGGCTTGTTATGATAGCTGTTGAATATAAAAAAACTTTGGTCTCTGTAAGTAATCAGCTAAGACATGCAGTATGCTTTTCAAGTCTGTGTGATGTAGCTTGGCAGTGGTATACTAAGATGAAATTGATTTATGTAAGCGCATCCTCCACATCTTTACTTGAAAGTTCGAACTTTTATTCCGTAAGTGGCTACCTCCTATTATTAAGTGTATTTTGATGAGATTTGATCTAGTAAGCACATTTTCCATACCTTTATTTGAAGAAAATTAAATTCTTTATTCCGTAGTATCTGTCTTCTTTTTTTTATTTTATTTTATTTTATTTTTTATTGTTATTTAAATGTTCTCTATTTGCAGCTGGGCAGGAGAGGTTTCGAACATTAACAGGTTCATATTACAGAGGCGCTCAAGGAATCATTATGGGTATCTTCTTTTTATTTCATCATTTTCTATCTACAATTATAGTATTAGCATGCTACCATTGCTCCACTTATGAAATCTCGTTCGGGTTTTTGAGCCTTAGAAAAGCTTCGATTTTAGGTTCAACTTTGAAACTTAGGGCTTTTCCTAAACTTCGAGGGATGACTTGTTTTGATAAATTCTCAAGTCTTAATTACTTTTTCTATTATTCAATTAGCTCTTAAGTTAACCAAACACTGTTACAACCTAAAAATTTAGTGTATGATGTGACCCGCCGTGAGACATTCACAAATCTCTCTGACATATGGGCTAAAGAAATTGACCTGTACTCAACAAATCAGGATTGCATCAAGATGCTTGTTGGAAACAAAGTGGATAAGGTATGCCTTTAACTCTTACAAAATTCAGTAGTAACTAGTAACTTCCCTGCTCTATTTAATTAACTATGGATTTGAATTAGTATGACTATCTGGCTTAATTAGTGCCATAGTTACTGAAGTAACCCAGTATATTCTATTGAGCTTGGTTTATTGGCTACAAATTGGTTATAATATTTTTCTTCTGTAAATCAATTAATCCTTATTCTTAGCCTTAGATATTTAAATTTGAGCGATCTTATCTTTCAGGAAAGTGAAAGGGTAGTCAGTAAAAAAGAGGGAATCGACTTTGCTCGAGAATATGGATGCCTATTTCTTGAATGTAGTGCAAAAACTCGAGTCAATGTGGAACAATGCTTTGATGAGCTTGTGTTAAAGGTGCGTGAAAACTTGAACCTCTTCTGCACTAATATGGACAGCATGAACCTCCTATATTAATGTCCAGTTGCTCTCAAGTTAGCCCAAGAGTGCAATTGTAAATTTTCAAGTTATTCAAATAAGCATTTAGCTTAGAAATTATTTTTATTAGGTAGAACCAAAACTAGAACCTATTCAAGAACATCTCAGAGTGTTTATAATTTGCCCCACCAATCCTCCATAAGCCATTCAGTAACTTGCTGCTCCAAAAATGTGTTTGCAGATTTTGGATACGCCCAGTCTTTTGGCTGATGGCTCAACAGGTTTGAAAAAGAACATCTTCAAAGAGAAACCTCCTCAAGAGAATGCATCAGCCGGTGGCTGCTGCTCATATTGATTTTATGTCGAGGACTCCAGGAGCATCTTCATTTGGTTTTAGGATGCTCGTTATGCTGTTATTCCATTTTAGCACACCCTTGAAGTCAAAAGGTTTATGTTCTTCAATCTTCCTTTTATGGATTATGAGTTCATTGAGCTAGAATATCTGCCAGAGTTATTTGCTCGTCTTCTTTTAGCCTGTGTTACTAGGTTGACAATTTATTGATTTACCATGAACTTGCAACTTCACAGATGGAAAAGGATCCAAAACCTTGGGAATCCTATCAATACTTCGGTTTCGAGACTGGGTTCTCTTAATTGTTTAGATATCCATCCCTTTCGTTTTTCACCTGCCCTATCTATATGCACGTTGGCAAGTAGGGGATTATCTATGTGATTCACCCCGCTTGCTTGCATCTACGAATGTTTGAACTAATTCCACTGCCTGTCCAATTGCCAAAACTTTTCTTGCTATTATCCTTCACTTGTTTCTGTATGAAAATGTGTGCCTTGTTTGTTTCTCTCCTTTGGGAAATAACAAACA

mRNA sequence

AAAATAGATTTGTTCGTACTGTATATCAATCAAAGGCGTCGGCACACTTTTCGAAATAAGAGTTGAGGAAGAGGATTCGGTGGGAAGCAAGCGAGTTCTAAATTCTGTCTGAAGAACACTTTCAAAGGCTTTTTCCTTCCCTCTCTACTCACTCAGTTTCTACTTTCCCTTTCCCTTTTCCTGTACTGGATTTGCTTTTTTCAAGGTGTTTTTTTCTGTGTTTCTGATGTCGTCGGCACCGTCTTCGAGTCAACCGGAGTTTGATTACTTGTTTAAGTTGCTGTTGATTGGGGACTCTGGAGTTGGGAAGAGTACGCTTCTTTTGCGATTCACTTCTGATTCATTTGAGGAACTTTCTCCAACTATTGGTGTGGATTTCAAGATTAAGCATGTTACAGTTGGAGGAAAGAAGTTGAAGCTTGCAATATGGGACACAGCTGGGCAGGAGAGGTTTCGAACATTAACAGGTTCATATTACAGAGGCGCTCAAGGAATCATTATGGTGTATGATGTGACCCGCCGTGAGACATTCACAAATCTCTCTGACATATGGGCTAAAGAAATTGACCTGTACTCAACAAATCAGGATTGCATCAAGATGCTTGTTGGAAACAAAGTGGATAAGGAAAGTGAAAGGGTAGTCAGTAAAAAAGAGGGAATCGACTTTGCTCGAGAATATGGATGCCTATTTCTTGAATGTAGTGCAAAAACTCGAGTCAATGTGGAACAATGCTTTGATGAGCTTGTGTTAAAGATTTTGGATACGCCCAGTCTTTTGGCTGATGGCTCAACAGGTTTGAAAAAGAACATCTTCAAAGAGAAACCTCCTCAAGAGAATGCATCAGCCGGTGGCTGCTGCTCATATTGATTTTATGTCGAGGACTCCAGGAGCATCTTCATTTGGTTTTAGGATGCTCGTTATGCTGTTATTCCATTTTAGCACACCCTTGAAGTCAAAAGGTTTATGTTCTTCAATCTTCCTTTTATGGATTATGAGTTCATTGAGCTAGAATATCTGCCAGAGTTATTTGCTCGTCTTCTTTTAGCCTGTGTTACTAGGTTGACAATTTATTGATTTACCATGAACTTGCAACTTCACAGATGGAAAAGGATCCAAAACCTTGGGAATCCTATCAATACTTCGGTTTCGAGACTGGGTTCTCTTAATTGTTTAGATATCCATCCCTTTCGTTTTTCACCTGCCCTATCTATATGCACGTTGGCAAGTAGGGGATTATCTATGTGATTCACCCCGCTTGCTTGCATCTACGAATGTTTGAACTAATTCCACTGCCTGTCCAATTGCCAAAACTTTTCTTGCTATTATCCTTCACTTGTTTCTGTATGAAAATGTGTGCCTTGTTTGTTTCTCTCCTTTGGGAAATAACAAACA

Coding sequence (CDS)

ATGTCGTCGGCACCGTCTTCGAGTCAACCGGAGTTTGATTACTTGTTTAAGTTGCTGTTGATTGGGGACTCTGGAGTTGGGAAGAGTACGCTTCTTTTGCGATTCACTTCTGATTCATTTGAGGAACTTTCTCCAACTATTGGTGTGGATTTCAAGATTAAGCATGTTACAGTTGGAGGAAAGAAGTTGAAGCTTGCAATATGGGACACAGCTGGGCAGGAGAGGTTTCGAACATTAACAGGTTCATATTACAGAGGCGCTCAAGGAATCATTATGGTGTATGATGTGACCCGCCGTGAGACATTCACAAATCTCTCTGACATATGGGCTAAAGAAATTGACCTGTACTCAACAAATCAGGATTGCATCAAGATGCTTGTTGGAAACAAAGTGGATAAGGAAAGTGAAAGGGTAGTCAGTAAAAAAGAGGGAATCGACTTTGCTCGAGAATATGGATGCCTATTTCTTGAATGTAGTGCAAAAACTCGAGTCAATGTGGAACAATGCTTTGATGAGCTTGTGTTAAAGATTTTGGATACGCCCAGTCTTTTGGCTGATGGCTCAACAGGTTTGAAAAAGAACATCTTCAAAGAGAAACCTCCTCAAGAGAATGCATCAGCCGGTGGCTGCTGCTCATATTGA

Protein sequence

MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTGLKKNIFKEKPPQENASAGGCCSY

Homology

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BLAST of Carg26862 vs. NCBI nr
Match: XP_022926286.1 (ras-related protein RABC1-like [Cucurbita moschata] >XP_022926287.1 ras-related protein RABC1-like [Cucurbita moschata] >XP_022981607.1 ras-related protein RABC1-like [Cucurbita maxima])

HSP 1 Score: 433.3 bits (1113), Expect = 4.7e-118
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 214
           PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 213

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BLAST of Carg26862 vs. NCBI nr
Match: XP_023525903.1 (ras-related protein RABC1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 431.4 bits (1108), Expect = 1.8e-117
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 214
           PSLLADGSTGLKKNIFKEKPPQENAS GGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPQENASPGGCCSY 213

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BLAST of Carg26862 vs. NCBI nr
Match: XP_022153719.1 (ras-related protein RABC1-like [Momordica charantia])

HSP 1 Score: 427.2 bits (1097), Expect = 3.3e-116
Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEID+YSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 214
           PSLLADGSTGLKKNIFKEKPPQ NAS GGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213

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BLAST of Carg26862 vs. NCBI nr
Match: XP_004146786.1 (PREDICTED: ras-related protein RABC1 isoform X1 [Cucumis sativus] >XP_011657438.1 PREDICTED: ras-related protein RABC1 isoform X1 [Cucumis sativus] >KGN47732.1 hypothetical protein Csa_6G395140 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 1.7e-115
Identity = 208/213 (97.65%), Postives = 210/213 (98.59%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 214
           PSLLADGSTGLKKNIFKEKPP+   SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213

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BLAST of Carg26862 vs. NCBI nr
Match: AIS71927.1 (RAS-related protein RABC1 [Citrullus lanatus])

HSP 1 Score: 422.9 bits (1086), Expect = 6.3e-115
Identity = 209/214 (97.66%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQEN-ASAGGCCSY 214
           PSLLADGSTGLKKNIFKEKPP+ N +SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETNSSSAGGCCSY 214

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BLAST of Carg26862 vs. TAIR10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18)

HSP 1 Score: 362.1 bits (928), Expect = 2.4e-100
Identity = 176/208 (84.62%), Postives = 194/208 (93.27%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 65
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F++LSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEIDLYSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 186 DGSTGLKKNIFKEKPPQ-ENASAGGCCS 213
           +GS+G KKNIFK+ P Q  + S+  CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

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BLAST of Carg26862 vs. TAIR10
Match: AT5G03530.1 (RAB GTPase homolog C2A)

HSP 1 Score: 313.2 bits (801), Expect = 1.3e-85
Identity = 146/207 (70.53%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LL+ F S S E+L+PTIGVDFKIK +TVGGK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
            IWDTAGQERFRTLT SYYRGAQGII+VYDVTRRETFTNL D+W KEI+LYSTNQ+C++M
Sbjct: 64  TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EGI  A+E  C+FLECSA+TR NVEQCF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPQENASAGGCCS 213
           +GS+ +K+NI K+KP  +  +  GCCS
Sbjct: 184 EGSSAVKRNILKQKPEHQTNTQSGCCS 210

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BLAST of Carg26862 vs. TAIR10
Match: AT3G09910.1 (RAB GTPase homolog C2B)

HSP 1 Score: 282.0 bits (720), Expect = 3.1e-76
Identity = 137/207 (66.18%), Postives = 165/207 (79.71%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LLL F S S E+L+PTIGVDFKIK + V GK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
            IWDTAGQE+FRTLT SY+RG+QGII+VYDVT+RETF NL+DIWAKEI+LYSTN DCIKM
Sbjct: 64  TIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EG+  A++  CLF ECSA+TR NV  CF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPQENASAGGCCS 213
           +GS+ +K+       P   A  G CCS
Sbjct: 184 EGSSSVKRK------PDYRAHQGRCCS 204

[Close]

BLAST of Carg26862 vs. TAIR10
Match: AT4G17530.1 (RAB GTPase homolog 1C)

HSP 1 Score: 188.0 bits (476), Expect = 6.2e-48
Identity = 107/204 (52.45%), Postives = 129/204 (63.24%), Query Frame = 0


Query: 10  PEFDYLFKLLLIGDSGVGKSTLLLRFTSDSF-EELSPTIGVDFKIKHVTVGGKKLKLAIW 69
           PE+DYLFKLLLIGDSGVGKS LLLRF  DS+ +    TIGVDFKI+ V   GK +KL IW
Sbjct: 3   PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIW 62

Query: 70  DTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 129
           DTAGQERFRT+T SYYRGA GII+ YDVT  E+F N+   W  EID Y+ +++  K+LVG
Sbjct: 63  DTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYA-SENVNKLLVG 122

Query: 130 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGS 189
           NK D  S++VVS +    FA E G  FLE SAK   NVE+ F  +   I    + +A   
Sbjct: 123 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI---KTRMASQP 182

Query: 190 TGLKKNIFKEKPPQENASAGGCCS 213
            G  K    +   Q      GCCS
Sbjct: 183 AGGSKPPTVQIRGQPVNQQSGCCS 201

[Close]

BLAST of Carg26862 vs. TAIR10
Match: AT1G02130.1 (RAS 5)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-47
Identity = 105/204 (51.47%), Postives = 128/204 (62.75%), Query Frame = 0


Query: 10  PEFDYLFKLLLIGDSGVGKSTLLLRFTSDSF-EELSPTIGVDFKIKHVTVGGKKLKLAIW 69
           PE+DYLFKLLLIGDSGVGKS LLLRF+ DS+ E    TIGVDFKI+ V   GK +KL IW
Sbjct: 3   PEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIW 62

Query: 70  DTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 129
           DTAGQERFRT+T SYYRGA GII+VYDVT  E+F N+   W  EID Y+++ +  K+LVG
Sbjct: 63  DTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVG 122

Query: 130 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGS 189
           NK D    R +  +    FA E G  F+E SAK   NVEQ F  +   I +  +    G+
Sbjct: 123 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 182

Query: 190 TGLKKNIFKEKPPQENASAGGCCS 213
                 +  +   Q  A   GCCS
Sbjct: 183 NARPPTV--QIRGQPVAQKNGCCS 202

[Close]

BLAST of Carg26862 vs. Swiss-Prot
Match: sp|O23657|RABC1_ARATH (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 4.3e-99
Identity = 176/208 (84.62%), Postives = 194/208 (93.27%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 65
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F++LSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEIDLYSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 186 DGSTGLKKNIFKEKPPQ-ENASAGGCCS 213
           +GS+G KKNIFK+ P Q  + S+  CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]

BLAST of Carg26862 vs. Swiss-Prot
Match: sp|O49841|RAC2A_ARATH (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.3e-84
Identity = 146/207 (70.53%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LL+ F S S E+L+PTIGVDFKIK +TVGGK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
            IWDTAGQERFRTLT SYYRGAQGII+VYDVTRRETFTNL D+W KEI+LYSTNQ+C++M
Sbjct: 64  TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EGI  A+E  C+FLECSA+TR NVEQCF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPQENASAGGCCS 213
           +GS+ +K+NI K+KP  +  +  GCCS
Sbjct: 184 EGSSAVKRNILKQKPEHQTNTQSGCCS 210

[Close]

BLAST of Carg26862 vs. Swiss-Prot
Match: sp|Q9SF92|RAC2B_ARATH (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 5.7e-75
Identity = 137/207 (66.18%), Postives = 165/207 (79.71%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LLL F S S E+L+PTIGVDFKIK + V GK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
            IWDTAGQE+FRTLT SY+RG+QGII+VYDVT+RETF NL+DIWAKEI+LYSTN DCIKM
Sbjct: 64  TIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EG+  A++  CLF ECSA+TR NV  CF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPQENASAGGCCS 213
           +GS+ +K+       P   A  G CCS
Sbjct: 184 EGSSSVKRK------PDYRAHQGRCCS 204

[Close]

BLAST of Carg26862 vs. Swiss-Prot
Match: sp|P36862|YPTV3_VOLCA (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.9e-60
Identity = 114/179 (63.69%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 13  DYLFKLLLIGDSGVGKSTLLLRFTSDSFEE-LSPTIGVDFKIKHVTVGGKKLKLAIWDTA 72
           DY FK+LL+GDSGVGKS +L RFTS  FEE  + TIGVDFK+K++T  GK+ KL IWDTA
Sbjct: 7   DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTA 66

Query: 73  GQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 132
           GQERFRTLT SYYRGAQGII VYDVTRR+TF +L   W +E D+YST +  IKM+V NKV
Sbjct: 67  GQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKV 126

Query: 133 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTG 191
           D  ++R VS +EG DFAR +GCLF+E SA+  + V Q F+EL+LKILDTP LL   + G
Sbjct: 127 DLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAVG 185

[Close]

BLAST of Carg26862 vs. Swiss-Prot
Match: sp|Q6DHC1|RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.6e-56
Identity = 112/197 (56.85%), Postives = 144/197 (73.10%), Query Frame = 0


Query: 17  KLLLIGDSGVGKSTLLLRFTSDSFE-ELSPTIGVDFKIKHVTVGGKKLKLAIWDTAGQER 76
           K+L+IG+SGVGKS+LLLRFT D+F+ EL+ TIGVDFK+K + + G + KLAIWDTAGQER
Sbjct: 10  KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQER 69

Query: 77  FRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKES 136
           FRTLT SYYRGAQG+I+VYDVT+R+TFT L + W  E++ Y T  D +KMLVGNK+DK++
Sbjct: 70  FRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDKDN 129

Query: 137 ERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTGLKKNI 196
            R V + EG+ FAR++  LF+E SAKTR  V+  F+ELV KIL TP L  + S       
Sbjct: 130 -REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLW-ESSIQNHGVQ 189

Query: 197 FKEKPPQENASAGGCCS 213
             +  PQ   + GG CS
Sbjct: 190 LSDNEPQRQGACGGYCS 203

[Close]

BLAST of Carg26862 vs. TrEMBL
Match: tr|A0A0A0KH59|A0A0A0KH59_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G395140 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.1e-115
Identity = 208/213 (97.65%), Postives = 210/213 (98.59%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 214
           PSLLADGSTGLKKNIFKEKPP+   SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213

[Close]

BLAST of Carg26862 vs. TrEMBL
Match: tr|A0A097BTY5|A0A097BTY5_CITLA (RAS-related protein RABC1 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 4.2e-115
Identity = 209/214 (97.66%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQEN-ASAGGCCSY 214
           PSLLADGSTGLKKNIFKEKPP+ N +SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETNSSSAGGCCSY 214

[Close]

BLAST of Carg26862 vs. TrEMBL
Match: tr|A0A1S4DVW9|A0A1S4DVW9_CUCME (ras-related protein RABC1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488699 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 4.5e-109
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKP 201
           PSLLADGSTGLKKNIFKEKP
Sbjct: 181 PSLLADGSTGLKKNIFKEKP 200

[Close]

BLAST of Carg26862 vs. TrEMBL
Match: tr|I1LXB2|I1LXB2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_13G036800 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.6e-106
Identity = 188/212 (88.68%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 2   SSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGK 61
           SS+ SS+QPEFDYLFKLLLIGDSGVGKSTLLL FTSD+FE+LSPTIGVDFK+K+VT+GGK
Sbjct: 4   SSSSSSTQPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTMGGK 63

Query: 62  KLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 121
           KLKLAIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD
Sbjct: 64  KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 123

Query: 122 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTP 181
           CIKMLVGNKVDKESERVVSKKEGIDFAREYGCL+ ECSAKTRVNV QCFDELV+KIL+TP
Sbjct: 124 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVAQCFDELVMKILETP 183

Query: 182 SLLADGSTGLKKNIFKEKPPQENASAGGCCSY 214
           SLLA+GS+G+KKNIFK+KPPQ +AS+ GCCS+
Sbjct: 184 SLLAEGSSGVKKNIFKQKPPQSDASSSGCCSW 215

[Close]

BLAST of Carg26862 vs. TrEMBL
Match: tr|A0A0B2QSG5|A0A0B2QSG5_GLYSO (Ras-related protein RABC1 OS=Glycine soja OX=3848 GN=glysoja_043725 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.6e-106
Identity = 188/212 (88.68%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 2   SSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGGK 61
           SS+ SS+QPEFDYLFKLLLIGDSGVGKSTLLL FTSD+FE+LSPTIGVDFK+K+VT+GGK
Sbjct: 4   SSSSSSTQPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTMGGK 63

Query: 62  KLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 121
           KLKLAIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD
Sbjct: 64  KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 123

Query: 122 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTP 181
           CIKMLVGNKVDKESERVVSKKEGIDFAREYGCL+ ECSAKTRVNV QCFDELV+KIL+TP
Sbjct: 124 CIKMLVGNKVDKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVAQCFDELVMKILETP 183

Query: 182 SLLADGSTGLKKNIFKEKPPQENASAGGCCSY 214
           SLLA+GS+G+KKNIFK+KPPQ +AS+ GCCS+
Sbjct: 184 SLLAEGSSGVKKNIFKQKPPQSDASSSGCCSW 215

The following BLAST results are available for this feature:

BLAST of Carg26862 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926286.1	4.7e-118	100.00	ras-related protein RABC1-like [Cucurbita moschata] >XP_022926287.1 ras-related ...	[more]
XP_023525903.1	1.8e-117	99.53	ras-related protein RABC1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022153719.1	3.3e-116	98.12	ras-related protein RABC1-like [Momordica charantia]	[more]
XP_004146786.1	1.7e-115	97.65	PREDICTED: ras-related protein RABC1 isoform X1 [Cucumis sativus] >XP_011657438....	[more]
AIS71927.1	6.3e-115	97.66	RAS-related protein RABC1 [Citrullus lanatus]	[more]

BLAST of Carg26862 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G43890.1	2.4e-100	84.62	RAB GTPASE HOMOLOG B18	[more]
AT5G03530.1	1.3e-85	70.53	RAB GTPase homolog C2A	[more]
AT3G09910.1	3.1e-76	66.18	RAB GTPase homolog C2B	[more]
AT4G17530.1	6.2e-48	52.45	RAB GTPase homolog 1C	[more]
AT1G02130.1	1.1e-47	51.47	RAS 5	[more]

BLAST of Carg26862 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23657\|RABC1_ARATH	4.3e-99	84.62	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
sp\|O49841\|RAC2A_ARATH	2.3e-84	70.53	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
sp\|Q9SF92\|RAC2B_ARATH	5.7e-75	66.18	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
sp\|P36862\|YPTV3_VOLCA	3.9e-60	63.69	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
sp\|Q6DHC1\|RB18B_DANRE	1.6e-56	56.85	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]

BLAST of Carg26862 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KH59\|A0A0A0KH59_CUCSA	1.1e-115	97.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G395140 PE=4 SV=1	[more]
tr\|A0A097BTY5\|A0A097BTY5_CITLA	4.2e-115	97.66	RAS-related protein RABC1 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
tr\|A0A1S4DVW9\|A0A1S4DVW9_CUCME	4.5e-109	99.50	ras-related protein RABC1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488699 PE=...	[more]
tr\|I1LXB2\|I1LXB2_SOYBN	4.6e-106	88.68	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_13G036800 PE=4 SV=1	[more]
tr\|A0A0B2QSG5\|A0A0B2QSG5_GLYSO	4.6e-106	88.68	Ras-related protein RABC1 OS=Glycine soja OX=3848 GN=glysoja_043725 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26862-RA	Carg26862-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 38..54 score: 30.24 coord: 155..177 score: 43.03 coord: 56..78 score: 52.5 coord: 120..133 score: 42.87 coord: 16..37 score: 55.22
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..180 e-value: 2.4E-98 score: 342.7
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 4..181 e-value: 0.0097 score: -4.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..180 e-value: 2.5E-34 score: 130.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..213 e-value: 1.7E-6 score: 37.6
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 18..180 e-value: 1.1E-13 score: 55.0
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 9..211 e-value: 1.2E-63 score: 216.1
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 3..210
None	No IPR available	PANTHER	PTHR24073:SF874	SUBFAMILY NOT NAMED	coord: 3..210
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..211 score: 33.088
None	No IPR available	CDD	cd01863	Rab18	coord: 16..177 e-value: 2.26326E-104 score: 299.997
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 17..178 e-value: 4.6E-57 score: 192.0
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..173 e-value: 2.3E-30 score: 103.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..186

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26862	MELO3C011704	Melon (DHL92) v3.5.1	carmeB0626
Carg26862	CmaCh01G010160	Cucurbita maxima (Rimu)	carcmaB0886
Carg26862	CmoCh01G010580	Cucurbita moschata (Rifu)	carcmoB0861
Carg26862	Lsi08G002830	Bottle gourd (USVL1VR-Ls)	carlsiB570
Carg26862	Cp4.1LG02g00110	Cucurbita pepo (Zucchini)	carcpeB0890
Carg26862	MELO3C011704.2	Melon (DHL92) v3.6.1	carmedB0634
Carg26862	Bhi04G001701	Wax gourd	carwgoB0746

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None