CmoCh01G008170 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G008170
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Microtubule-associated protein RP/EB family member 3
Location	Cmo_Chr01 : 4374233 .. 4376802 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAAATGGGGTTTTTTTTTTTTTTTCTTTTTGAAAATTGTTTAAAGCATCGTTTCCCCCTTGATGATGTAAGGCCATAAGCCGCCTTCTTAATGCCGTCGTCCTTCCTTCCCAGTTTATTTTAAACATTTTTGTGCTTTCCCCTCTCTTCCCATCTGCATTTTTTTTCCCATTTTTATGATTTGGGTCTTCTGGGAATTGCTTTGGGACTATGGCTTCCAATATTGGAATGATGGACAGTGCTTATTTTGTCGGTAGGAATGAGATTTTGACATGGATCAACAATTGCCTTCAACTCAATCTCTCTCGCATTGAAGAGGTTTTTCTTTCTGCTTCTTTTGTTCATCCCTTTCGCCATTGTTGTTCTTGGGTTTAATGTTTGTATTGTAATGACTGATGTGGGTTTTCTCTGTTTATGCATTTTGAGTTTCCGGTCGGTCCCCCGTTTCTCCCATCTCTTTCCTTTTGGATATCCATTGTTCGATGTTAGGATATACGGTGGTATACACGTTTGTGTTTGTAGAAATGCTTGAAAAAGAGGAATCAATTTTTGCTCCAACCTCCAAACATTTTCAAACCATGTTCTTCAGTTGCTTTATTTTTCTGGATTTGGTTGAATTTCTCTAAGAACAAATGGAGGTTTCTGGGCAATGGCTAACTATGACATATGATAGTAATTTTGTTACCTTTACTTAAGGAAAGAAATGGGTCATAATGTTCTTGAGTTAATCTCACATTATCCGTTTGCATTATACTCCTCGTTGAGGACTGACTAGTTCCTTGTAAAGATTGAAGCATAGGATAGGAAACCCAGAATGTAGCTGTTTTCGTTTAATCTTAGTGTACAAAACTTGAAATCTACAAGGGTTATTAATGATTATGGGCACTGGATTATGTATGAACTCTAGTGAAACAAAATTTAGTCATGCGAGATTAAGCTCTCATATTCAGAGATTTTGTCTTAGCCACATTTTCTCAGAGCAAGTCATATGTCTATTATTATGATATTGAATTCATTGCAACTTGCAAGGAAAATTACTATTGGAAGTAATCTTGGAGTGATTATGATTATCTCTCAGTATCCTTTTTGCTGTGTTTGTCGTTCTCCACAGGCTGCATCCGGGGCTGTGCAGTGTCAGATGATTGATATGACCTACCCAGGAGCTGTCCCAATGCATAAGGTTAGTTCTATCTCTTATCCATGTTTTTGTAGATTGTGAGAATAATTATTGGCTACTGTATGATACTGAGTTGTCTGTCTTGGATGTGTTTAAAAGGTCAATTTTGATGCCAAAACTGAATACGATATGATCCAGAATTACAAGGTACTTCAGGATGTATTCAATAAGTTGAAAATTGAAAAGGTATGTTATGAAATGGGTAGCCTTTTATCTCAGCTCTTGACATGTCTTGTGGTTGATAGCTAGAAAGATGTTGTTTCCTTTGTTATTTGTGGCAGCATATTGAAGTGAATAGGCTTGTAAAAGGTAGAACACTGGATAACTTGGAATTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTAAACGGTGGCATAATGAATGAGTATGCTATGCTAATTTTCTCCTACTTTATAAACACTGTCGTGTCTTCTTTCCATTTTGTCATCAATGAATGTCTTTAACAGAAACTATAACCCCGTGGAGCGGCGATGTAAGGGTGTAAAGGGTGGAGTGGTGATGAAGGGCTGCCAGAAGGCTGCTAAATCACTGCAAACACATAATATACATAGCCCTGGCTCTTGTGACCCAGTTGAACCAAGTAAAACTTCTTCTCAGCTTGGTTCACTTATCTATTTTCGTTGGCAATGAGCCATATCTTAAGCTATTCCGCCTTGTCAATCCAGGATCGAAGCCGGGGAAGAACGGCGTAACGAGCAGGGGACATTCTTCTGGAGAAATTCAAGCGTTGTCCAAGGAGGTAGGCTGCAAAACAAAGCCACTGCCAGTTTCTACTTTGCTCTTAGATGATGCTCTTTTTGTTGCAATTCTTCTTTTGAACAGATTACAGAACTGAAACTGTCTGTAGATCTCTTGGAAAAAGAAAGAGACTTCTACTTCGCAAAATTAAGGGACATAGAAATCTTTTGTCAGATGCCCGAATTAGAAGAGCTCCCGGTATGAGCTCCATGAATGACTGGAAAACGATACTTTTATCAGAACTCTCCACTGTATAATGATTATACGTTTGATGCAGATGGCAGCAGCAATCAAGATGATTTTGTATGCAGCAGACGCCAAGGAGTCAGCACTAGCAGAGGCTCAAGAGTACATATACCAATCAAAGAACACTACCAACGTTGAAGATGAAAATGAGGAGTGAATTTGAAGTTCCCACAAAATTTGAGCTTAAAAATTGAGAGAAAAACAAGGCTGGGTCATTGCCAAGCAATTCTACAGTTGTTATATGTGTTTATCTCAAGAATCATGATTGTTAACTGGCCATTGACCTGAGCATTGGATTTGTAATAACAGAACGCTCATCATAAGCTTGTTGTTATGTTCTTTCTATTGTCTGATTGCAGTGAAAATTGGTAATAATAACTACAC

mRNA sequence

TCCAAATGGGGTTTTTTTTTTTTTTTCTTTTTGAAAATTGTTTAAAGCATCGTTTCCCCCTTGATGATGTAAGGCCATAAGCCGCCTTCTTAATGCCGTCGTCCTTCCTTCCCAGTTTATTTTAAACATTTTTGTGCTTTCCCCTCTCTTCCCATCTGCATTTTTTTTCCCATTTTTATGATTTGGGTCTTCTGGGAATTGCTTTGGGACTATGGCTTCCAATATTGGAATGATGGACAGTGCTTATTTTGTCGGTAGGAATGAGATTTTGACATGGATCAACAATTGCCTTCAACTCAATCTCTCTCGCATTGAAGAGGCTGCATCCGGGGCTGTGCAGTGTCAGATGATTGATATGACCTACCCAGGAGCTGTCCCAATGCATAAGGTCAATTTTGATGCCAAAACTGAATACGATATGATCCAGAATTACAAGGTACTTCAGGATGTATTCAATAAGTTGAAAATTGAAAAGCATATTGAAGTGAATAGGCTTGTAAAAGGTAGAACACTGGATAACTTGGAATTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTAAACGGTGGCATAATGAATGAAAACTATAACCCCGTGGAGCGGCGATGTAAGGGTGTAAAGGGTGGAGTGGTGATGAAGGGCTGCCAGAAGGCTGCTAAATCACTGCAAACACATAATATACATAGCCCTGGCTCTTGTGACCCAGTTGAACCAAGATCGAAGCCGGGGAAGAACGGCGTAACGAGCAGGGGACATTCTTCTGGAGAAATTCAAGCGTTGTCCAAGGAGATTACAGAACTGAAACTGTCTGTAGATCTCTTGGAAAAAGAAAGAGACTTCTACTTCGCAAAATTAAGGGACATAGAAATCTTTTGTCAGATGCCCGAATTAGAAGAGCTCCCGATGGCAGCAGCAATCAAGATGATTTTGTATGCAGCAGACGCCAAGGAGTCAGCACTAGCAGAGGCTCAAGAGTACATATACCAATCAAAGAACACTACCAACGTTGAAGATGAAAATGAGGAGTGAATTTGAAGTTCCCACAAAATTTGAGCTTAAAAATTGAGAGAAAAACAAGGCTGGGTCATTGCCAAGCAATTCTACAGTTGTTATATGTGTTTATCTCAAGAATCATGATTGTTAACTGGCCATTGACCTGAGCATTGGATTTGTAATAACAGAACGCTCATCATAAGCTTGTTGTTATGTTCTTTCTATTGTCTGATTGCAGTGAAAATTGGTAATAATAACTACAC

Coding sequence (CDS)

ATGGCTTCCAATATTGGAATGATGGACAGTGCTTATTTTGTCGGTAGGAATGAGATTTTGACATGGATCAACAATTGCCTTCAACTCAATCTCTCTCGCATTGAAGAGGCTGCATCCGGGGCTGTGCAGTGTCAGATGATTGATATGACCTACCCAGGAGCTGTCCCAATGCATAAGGTCAATTTTGATGCCAAAACTGAATACGATATGATCCAGAATTACAAGGTACTTCAGGATGTATTCAATAAGTTGAAAATTGAAAAGCATATTGAAGTGAATAGGCTTGTAAAAGGTAGAACACTGGATAACTTGGAATTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTAAACGGTGGCATAATGAATGAAAACTATAACCCCGTGGAGCGGCGATGTAAGGGTGTAAAGGGTGGAGTGGTGATGAAGGGCTGCCAGAAGGCTGCTAAATCACTGCAAACACATAATATACATAGCCCTGGCTCTTGTGACCCAGTTGAACCAAGATCGAAGCCGGGGAAGAACGGCGTAACGAGCAGGGGACATTCTTCTGGAGAAATTCAAGCGTTGTCCAAGGAGATTACAGAACTGAAACTGTCTGTAGATCTCTTGGAAAAAGAAAGAGACTTCTACTTCGCAAAATTAAGGGACATAGAAATCTTTTGTCAGATGCCCGAATTAGAAGAGCTCCCGATGGCAGCAGCAATCAAGATGATTTTGTATGCAGCAGACGCCAAGGAGTCAGCACTAGCAGAGGCTCAAGAGTACATATACCAATCAAAGAACACTACCAACGTTGAAGATGAAAATGAGGAGTGA

Homology

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BLAST of CmoCh01G008170 vs. Swiss-Prot
Match: EB1B_ARATH (Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana GN=EB1B PE=1 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 9.3e-99
Identity = 188/278 (67.63%), Postives = 221/278 (79.50%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEIL+WIN+ L LNLSRIEEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NF+AK EY+MIQNYKV+Q+VF KLKI K +EVNRLVKGR LDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPG------K 180
           IMNENYNPVERR +G +   V KG  K +KSLQT+N+H P    PV   +KP        
Sbjct: 121 IMNENYNPVERRSRGGREKSV-KGSSKISKSLQTNNMHHP----PVATSNKPAGPKQAKS 180

Query: 181 NGVTSRGHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAA 240
           +G+    +SS E+QALSKE+ +LK+SVDLLEKERDFYF+KLRDIEI CQ PEL++LP+  
Sbjct: 181 HGIGGGSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIVV 240

Query: 241 AIKMILYAADAKESALAEAQEYIYQSKNTTNVEDENEE 273
           A+K ILYA DA ES L EAQE + QS      E+E +E
Sbjct: 241 AVKKILYATDANESVLEEAQECLNQSLGLEGYEEEGKE 273

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BLAST of CmoCh01G008170 vs. Swiss-Prot
Match: EB1A_ARATH (Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana GN=EB1A PE=1 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 7.8e-98
Identity = 187/272 (68.75%), Postives = 214/272 (78.68%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEILTWIN+ L LNLSR+EEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAK EYDMIQNYKVLQDVFNKLKI K +E+NRLVKGR LDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERR +  K   V KG  K  KSLQT+N H P +   V      G      +
Sbjct: 121 IMNENYNPVERRSRNGKERSV-KGSNKIPKSLQTNNNHPPPNSSSVGLSKASG-----PK 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
              + E+QALSKE+ +LK+S DLLEKERDFYF+KLRD+EI CQ PEL++LP+  A+K IL
Sbjct: 181 SAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIVVAVKKIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENEE 273
           YA DA ESAL +AQEY+ QS     VED+  E
Sbjct: 241 YATDANESALEDAQEYLNQS---LGVEDDEAE 263

[Close]

BLAST of CmoCh01G008170 vs. Swiss-Prot
Match: EB1C_ARATH (Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana GN=EB1C PE=1 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.9e-76
Identity = 156/274 (56.93%), Postives = 189/274 (68.98%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGR+EIL WIN+ LQLNLS++EEA SGAV CQ++D  +PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAK+EY+MIQNYKVLQDVFNKLKI KHIEV++LVKGR LDNLEF+QW+K+YCDSVNGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRS------KPGK 180
               NY+ +ERR +  KGG   K   K A + Q     S  S  P    S      +P  
Sbjct: 121 --QHNYHALERR-EASKGG---KEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQS 180

Query: 181 NGVTSRGHSSGE--------------IQALSKEITELKLSVDLLEKERDFYFAKLRDIEI 240
           N   +   S+G               + A  ++ITELKL +D LEKERDFYF+KLRD+EI
Sbjct: 181 NNTGTHHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEI 240

Query: 241 FCQMPELEELPMAAAIKMILYAADAKESALAEAQ 255
            CQ P+ E LP+  +IK ILYAAD ++   AE Q
Sbjct: 241 LCQNPDTEHLPLVGSIKRILYAADGEDVGAAETQ 268

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BLAST of CmoCh01G008170 vs. Swiss-Prot
Match: MARE1_XENTR (Microtubule-associated protein RP/EB family member 1 OS=Xenopus tropicalis GN=mapre1 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 9.7e-40
Identity = 100/241 (41.49%), Postives = 145/241 (60.17%), Query Frame = 1


Query: 14  VGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQN 73
           + R+++L WIN  LQLNL++IE+  SG+V CQ +DM +PG+V + KV F AK E++ IQN
Sbjct: 15  LSRHDMLAWINESLQLNLTKIEQLCSGSVYCQFMDMLFPGSVVLKKVKFQAKLEHEYIQN 74

Query: 74  YKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
           +KVLQ  F K+ ++K I V++LVKG+  DN EF+QW K++ D+   G   ++Y+PV  R 
Sbjct: 75  FKVLQAGFKKMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAARQ 134

Query: 134 KGVKGGVVMKGC---QKAAKSLQTHNIHSPGSCDPVE---PRSKPGKNGVTSR----GHS 193
                 V +       K  K L + N  +P    PV+     +KP   G++ +    G+ 
Sbjct: 135 GQESAPVPVLAAPVLNKPKKPLGSGNT-APQRTVPVQRTAVSNKPPAQGISKKPATVGNG 194

Query: 194 SGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMILYAA 245
             E   L ++I  LK++V+ LEKERDFYF KLR+IE+ CQ  E E  P+   I  ILYA 
Sbjct: 195 DDESAELIQQINVLKITVEDLEKERDFYFGKLRNIELICQENEGESDPVLQRIIEILYAT 251

[Close]

BLAST of CmoCh01G008170 vs. Swiss-Prot
Match: MARE1_COTJA (Microtubule-associated protein RP/EB family member 1 OS=Coturnix coturnix japonica GN=MAPRE1 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.8e-39
Identity = 104/253 (41.11%), Postives = 144/253 (56.92%), Query Frame = 1


Query: 14  VGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQN 73
           + R+++L WIN  LQL L++IE+  SGA  CQ +DM +PG+V + KV F AK E++ IQN
Sbjct: 15  LSRHDMLAWINESLQLTLTKIEQLCSGAAYCQFMDMLFPGSVALKKVKFQAKLEHEYIQN 74

Query: 74  YKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR- 133
           +KVLQ  F ++ ++K I V++LVKG+  DN EF+QW K++ D+   G   + Y+PV  R 
Sbjct: 75  FKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAARQ 134

Query: 134 -CKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPV----EPRSKPGKNGVTSRGHSSGEI 193
             + V   +V     K  K L T    S G   P+     P +  G  G+  +     E 
Sbjct: 135 GQETVAPNLVAPVMNKPKKPLGT---GSAGPQRPIVAQRTPATPKGGTGMVKKAAGDDES 194

Query: 194 QALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMILYAAD--- 253
             L ++I  LKL+V+ LEKERDFYF KLR+IE+ CQ  E E  P+   I  ILYA D   
Sbjct: 195 AGLIEQINVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVEILYATDEGF 254

Query: 254 --AKESALAEAQE 256
               E A  E QE
Sbjct: 255 VIPDEGAPQEEQE 261

[Close]

BLAST of CmoCh01G008170 vs. TrEMBL
Match: M5WMZ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009753mg PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 1.6e-113
Identity = 223/277 (80.51%), Postives = 236/277 (85.20%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIG+MDSAYFVGRNEILTWINN LQLNLSRIEEAASGAVQCQM+DMTYPG VPMHKV
Sbjct: 1   MASNIGIMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQ+VFNKLKIEKH+EVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHLEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPV----EPRSKPGKNG 180
           IMNENYNPVERRCKG K     KG QK +KSLQT+N+H+PGS D V        K GK  
Sbjct: 121 IMNENYNPVERRCKGGKDR-YPKGSQKFSKSLQTNNLHNPGSGDTVGLSKTSGPKQGKPY 180

Query: 181 VTSRG-HSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAA 240
             + G +SSGE+QALSKEIT+LKLSVDLLEKERDFYFAKLRDIEI CQ  ELEELPMA A
Sbjct: 181 AAAGGANSSGEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTSELEELPMAVA 240

Query: 241 IKMILYAADAKESALAEAQEYIYQSKNTTNVEDENEE 273
           IK ILYAADAKES LAEAQEY+YQS N    E E EE
Sbjct: 241 IKKILYAADAKESPLAEAQEYLYQSMNADEKEAETEE 276

[Close]

BLAST of CmoCh01G008170 vs. TrEMBL
Match: A0A0A0LT98_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G033010 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 2.3e-112
Identity = 218/272 (80.15%), Postives = 231/272 (84.93%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEK+  +N +                R+C  +   
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKYWIINSV--------------FFRFCPQLFLE 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
             N NYNPVERRCKG KGG  MKGCQKAAKSLQTHN+HS GS D VEPRSKPGKNGVT  
Sbjct: 121 CHNRNYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGVTGG 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
            +SS EIQALSKEITELK+SVDLLEKERDFYFAKLRDIEIFCQM ELE+LPM AAIKMIL
Sbjct: 181 TNSSTEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMSELEDLPMTAAIKMIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENEE 273
           YAADAKESAL EAQEYIYQS+N ++VE+ENEE
Sbjct: 241 YAADAKESALTEAQEYIYQSQNRSDVENENEE 258

[Close]

BLAST of CmoCh01G008170 vs. TrEMBL
Match: W9QQ60_9ROSA (Microtubule-associated protein RP/EB family member 3 OS=Morus notabilis GN=L484_005306 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 1.8e-109
Identity = 216/275 (78.55%), Postives = 229/275 (83.27%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEILTWINN LQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKI+KHIEVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIDKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVT-- 180
           IMNENYNPVERR KG K     KG QK +KSLQT+N H+ GS D    R+   K G T  
Sbjct: 121 IMNENYNPVERRGKGGKER-NFKGSQKNSKSLQTNNTHNAGSGDAAGLRNSGPKQGKTYS 180

Query: 181 --SRGHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAI 240
                 S+ EIQALS EIT+LKLSVD+LEKERDFYFAKLRDIEI CQ PELE LPMA A+
Sbjct: 181 ASGAADSTSEIQALSNEITDLKLSVDVLEKERDFYFAKLRDIEILCQDPELENLPMAVAV 240

Query: 241 KMILYAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           K ILYA DAKESAL+EAQEYI QS N +  E + E
Sbjct: 241 KKILYAVDAKESALSEAQEYIQQSANASKEEPDTE 274

[Close]

BLAST of CmoCh01G008170 vs. TrEMBL
Match: B9I2Z5_POPTR (Microtubule-associated EB1 family protein OS=Populus trichocarpa GN=POPTR_0012s07120g PE=4 SV=2)

HSP 1 Score: 401.0 bits (1029), Expect = 1.2e-108
Identity = 212/272 (77.94%), Postives = 227/272 (83.46%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINN LQLNLSRIEEAASGAVQCQM+DMTYPG VPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERR KG K     KG QK  KSLQ +N+H+  S D V+     GK    + 
Sbjct: 121 IMNENYNPVERRSKGGKDR-NSKGSQKTTKSLQANNLHNSASGDTVDLNKMSGKGSAVAG 180

Query: 181 GHS-SGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMI 240
           G + S EIQALSKE+T LKLSVD LEKERDFYFAKLRDIEI CQ+PE+E+LPM  AIK I
Sbjct: 181 GATYSEEIQALSKEVTNLKLSVDHLEKERDFYFAKLRDIEILCQIPEMEDLPMTVAIKKI 240

Query: 241 LYAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           LYA DAKESAL EAQEY+ ++ NT   E E+E
Sbjct: 241 LYADDAKESALEEAQEYLSEAINTVETEVESE 271

[Close]

BLAST of CmoCh01G008170 vs. TrEMBL
Match: A0A067KHF6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11610 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.5e-108
Identity = 214/276 (77.54%), Postives = 233/276 (84.42%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINN LQLNL+RIEEAASGAVQCQM+DMTYPG VPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNRLQLNLTRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQ+VFNKLKIEKHIEVNRLVKGR LDNLEFLQWLKRYCDS+NGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSINGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPV----EPRSKPGKNG 180
           IMNENYNPVERR KG K     KGC K +KSLQ++ +H+  S +PV        KPG+  
Sbjct: 121 IMNENYNPVERRIKGGKDR-NSKGCPKTSKSLQSNIMHNSASGEPVGLSKTSGPKPGRGS 180

Query: 181 VTSRG-HSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAA 240
             + G +SS EI+ LSKEIT+LKLSVD LEKERDFYFAKLRDIEI CQ PELE++PMA A
Sbjct: 181 AVAGGANSSAEIETLSKEITDLKLSVDHLEKERDFYFAKLRDIEILCQTPELEDIPMAVA 240

Query: 241 IKMILYAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           IK ILYAADAKESAL EAQEY+ Q+ N   VEDENE
Sbjct: 241 IKKILYAADAKESALEEAQEYLNQALN-GEVEDENE 274

[Close]

BLAST of CmoCh01G008170 vs. TAIR10
Match: AT5G62500.1 (AT5G62500.1 end binding protein 1B)

HSP 1 Score: 361.3 bits (926), Expect = 5.2e-100
Identity = 188/278 (67.63%), Postives = 221/278 (79.50%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEIL+WIN+ L LNLSRIEEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NF+AK EY+MIQNYKV+Q+VF KLKI K +EVNRLVKGR LDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPG------K 180
           IMNENYNPVERR +G +   V KG  K +KSLQT+N+H P    PV   +KP        
Sbjct: 121 IMNENYNPVERRSRGGREKSV-KGSSKISKSLQTNNMHHP----PVATSNKPAGPKQAKS 180

Query: 181 NGVTSRGHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAA 240
           +G+    +SS E+QALSKE+ +LK+SVDLLEKERDFYF+KLRDIEI CQ PEL++LP+  
Sbjct: 181 HGIGGGSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIVV 240

Query: 241 AIKMILYAADAKESALAEAQEYIYQSKNTTNVEDENEE 273
           A+K ILYA DA ES L EAQE + QS      E+E +E
Sbjct: 241 AVKKILYATDANESVLEEAQECLNQSLGLEGYEEEGKE 273

[Close]

BLAST of CmoCh01G008170 vs. TAIR10
Match: AT3G47690.1 (AT3G47690.1 microtubule end binding protein EB1A)

HSP 1 Score: 358.2 bits (918), Expect = 4.4e-99
Identity = 187/272 (68.75%), Postives = 214/272 (78.68%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEILTWIN+ L LNLSR+EEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAK EYDMIQNYKVLQDVFNKLKI K +E+NRLVKGR LDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERR +  K   V KG  K  KSLQT+N H P +   V      G      +
Sbjct: 121 IMNENYNPVERRSRNGKERSV-KGSNKIPKSLQTNNNHPPPNSSSVGLSKASG-----PK 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
              + E+QALSKE+ +LK+S DLLEKERDFYF+KLRD+EI CQ PEL++LP+  A+K IL
Sbjct: 181 SAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIVVAVKKIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENEE 273
           YA DA ESAL +AQEY+ QS     VED+  E
Sbjct: 241 YATDANESALEDAQEYLNQS---LGVEDDEAE 263

[Close]

BLAST of CmoCh01G008170 vs. TAIR10
Match: AT5G67270.1 (AT5G67270.1 end binding protein 1C)

HSP 1 Score: 286.6 bits (732), Expect = 1.6e-77
Identity = 156/274 (56.93%), Postives = 189/274 (68.98%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGR+EIL WIN+ LQLNLS++EEA SGAV CQ++D  +PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAK+EY+MIQNYKVLQDVFNKLKI KHIEV++LVKGR LDNLEF+QW+K+YCDSVNGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRS------KPGK 180
               NY+ +ERR +  KGG   K   K A + Q     S  S  P    S      +P  
Sbjct: 121 --QHNYHALERR-EASKGG---KEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQS 180

Query: 181 NGVTSRGHSSGE--------------IQALSKEITELKLSVDLLEKERDFYFAKLRDIEI 240
           N   +   S+G               + A  ++ITELKL +D LEKERDFYF+KLRD+EI
Sbjct: 181 NNTGTHHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEI 240

Query: 241 FCQMPELEELPMAAAIKMILYAADAKESALAEAQ 255
            CQ P+ E LP+  +IK ILYAAD ++   AE Q
Sbjct: 241 LCQNPDTEHLPLVGSIKRILYAADGEDVGAAETQ 268

[Close]

BLAST of CmoCh01G008170 vs. NCBI nr
Match: gi|659066352|ref|XP_008440447.1| (PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cucumis melo])

HSP 1 Score: 499.6 bits (1285), Expect = 3.5e-138
Identity = 252/272 (92.65%), Postives = 259/272 (95.22%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERRCKG KGG  MKGCQKAAKSLQTHN+HS GS D VEPRSKPGKNG+T  
Sbjct: 121 IMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGITGG 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
            +SS EIQALSKEITELK+SVDLLEKERDFYFAKLRDIEIFCQMPELE+LPMAAAIKMIL
Sbjct: 181 TNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENEE 273
           YAADAKESAL EAQEYIYQS+N T+VEDENEE
Sbjct: 241 YAADAKESALTEAQEYIYQSQNRTDVEDENEE 272

[Close]

BLAST of CmoCh01G008170 vs. NCBI nr
Match: gi|449439257|ref|XP_004137403.1| (PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cucumis sativus])

HSP 1 Score: 491.1 bits (1263), Expect = 1.2e-135
Identity = 249/272 (91.54%), Postives = 257/272 (94.49%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERRCKG KGG  MKGCQKAAKSLQTHN+HS GS D VEPRSKPGKNGVT  
Sbjct: 121 IMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGVTGG 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
            +SS EIQALSKEITELK+SVDLLEKERDFYFAKLRDIEIFCQM ELE+LPM AAIKMIL
Sbjct: 181 TNSSTEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMSELEDLPMTAAIKMIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENEE 273
           YAADAKESAL EAQEYIYQS+N ++VE+ENEE
Sbjct: 241 YAADAKESALTEAQEYIYQSQNRSDVENENEE 272

[Close]

BLAST of CmoCh01G008170 vs. NCBI nr
Match: gi|659066354|ref|XP_008440535.1| (PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X2 [Cucumis melo])

HSP 1 Score: 427.2 bits (1097), Expect = 2.2e-116
Identity = 216/237 (91.14%), Postives = 224/237 (94.51%), Query Frame = 1


Query: 36  EAASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRL 95
           +AASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRL
Sbjct: 7   KAASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRL 66

Query: 96  VKGRTLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTH 155
           VKGR LDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKG KGG  MKGCQKAAKSLQTH
Sbjct: 67  VKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTH 126

Query: 156 NIHSPGSCDPVEPRSKPGKNGVTSRGHSSGEIQALSKEITELKLSVDLLEKERDFYFAKL 215
           N+HS GS D VEPRSKPGKNG+T   +SS EIQALSKEITELK+SVDLLEKERDFYFAKL
Sbjct: 127 NMHSHGSGDSVEPRSKPGKNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKL 186

Query: 216 RDIEIFCQMPELEELPMAAAIKMILYAADAKESALAEAQEYIYQSKNTTNVEDENEE 273
           RDIEIFCQMPELE+LPMAAAIKMILYAADAKESAL EAQEYIYQS+N T+VEDENEE
Sbjct: 187 RDIEIFCQMPELEDLPMAAAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 243

[Close]

BLAST of CmoCh01G008170 vs. NCBI nr
Match: gi|595848067|ref|XP_007209454.1| (hypothetical protein PRUPE_ppa009753mg [Prunus persica])

HSP 1 Score: 417.2 bits (1071), Expect = 2.3e-113
Identity = 223/277 (80.51%), Postives = 236/277 (85.20%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIG+MDSAYFVGRNEILTWINN LQLNLSRIEEAASGAVQCQM+DMTYPG VPMHKV
Sbjct: 1   MASNIGIMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQ+VFNKLKIEKH+EVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHLEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPV----EPRSKPGKNG 180
           IMNENYNPVERRCKG K     KG QK +KSLQT+N+H+PGS D V        K GK  
Sbjct: 121 IMNENYNPVERRCKGGKDR-YPKGSQKFSKSLQTNNLHNPGSGDTVGLSKTSGPKQGKPY 180

Query: 181 VTSRG-HSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAA 240
             + G +SSGE+QALSKEIT+LKLSVDLLEKERDFYFAKLRDIEI CQ  ELEELPMA A
Sbjct: 181 AAAGGANSSGEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTSELEELPMAVA 240

Query: 241 IKMILYAADAKESALAEAQEYIYQSKNTTNVEDENEE 273
           IK ILYAADAKES LAEAQEY+YQS N    E E EE
Sbjct: 241 IKKILYAADAKESPLAEAQEYLYQSMNADEKEAETEE 276

[Close]

BLAST of CmoCh01G008170 vs. NCBI nr
Match: gi|645269028|ref|XP_008239808.1| (PREDICTED: microtubule-associated protein RP/EB family member 1A [Prunus mume])

HSP 1 Score: 416.4 bits (1069), Expect = 3.9e-113
Identity = 222/277 (80.14%), Postives = 236/277 (85.20%), Query Frame = 1


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIG+MDSAYFVGRNEILTWINN LQLNLSRIEEAASGAVQCQM+DMTYPG VPMHKV
Sbjct: 1   MASNIGIMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQ+VFNKLKIEKH+EVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHLEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPV----EPRSKPGKNG 180
           IMNENYNPVERRCKG K     KG QK++KSLQ +N+H+PGS D V        K GK  
Sbjct: 121 IMNENYNPVERRCKGGKDR-YPKGSQKSSKSLQANNLHNPGSGDTVGLNKTSGPKQGKPY 180

Query: 181 VTSRG-HSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAA 240
             + G +SSGE+QALSKEIT+LKLSVDLLEKERDFYFAKLRDIEI CQ  ELEELPMA A
Sbjct: 181 AAAGGANSSGEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTSELEELPMAVA 240

Query: 241 IKMILYAADAKESALAEAQEYIYQSKNTTNVEDENEE 273
           IK ILYAADAKES LAEAQEY+YQS N    E E EE
Sbjct: 241 IKKILYAADAKESPLAEAQEYLYQSMNADEKEAETEE 276

The following BLAST results are available for this feature:

BLAST of CmoCh01G008170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EB1B_ARATH	9.3e-99	67.63	Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana GN...	[more]
EB1A_ARATH	7.8e-98	68.75	Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana GN...	[more]
EB1C_ARATH	2.9e-76	56.93	Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana GN...	[more]
MARE1_XENTR	9.7e-40	41.49	Microtubule-associated protein RP/EB family member 1 OS=Xenopus tropicalis GN=ma...	[more]
MARE1_COTJA	2.8e-39	41.11	Microtubule-associated protein RP/EB family member 1 OS=Coturnix coturnix japoni...	[more]

BLAST of CmoCh01G008170 vs. TrEMBL


Match Name	E-value	Identity	Description
M5WMZ4_PRUPE	1.6e-113	80.51	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009753mg PE=4 SV=1	[more]
A0A0A0LT98_CUCSA	2.3e-112	80.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G033010 PE=4 SV=1	[more]
W9QQ60_9ROSA	1.8e-109	78.55	Microtubule-associated protein RP/EB family member 3 OS=Morus notabilis GN=L484_...	[more]
B9I2Z5_POPTR	1.2e-108	77.94	Microtubule-associated EB1 family protein OS=Populus trichocarpa GN=POPTR_0012s0...	[more]
A0A067KHF6_JATCU	1.5e-108	77.54	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11610 PE=4 SV=1	[more]

BLAST of CmoCh01G008170 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62500.1	5.2e-100	67.63	end binding protein 1B	[more]
AT3G47690.1	4.4e-99	68.75	microtubule end binding protein EB1A	[more]
AT5G67270.1	1.6e-77	56.93	end binding protein 1C	[more]

BLAST of CmoCh01G008170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066352\|ref\|XP_008440447.1\|	3.5e-138	92.65	PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cuc...	[more]
gi\|449439257\|ref\|XP_004137403.1\|	1.2e-135	91.54	PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cuc...	[more]
gi\|659066354\|ref\|XP_008440535.1\|	2.2e-116	91.14	PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X2 [Cuc...	[more]
gi\|595848067\|ref\|XP_007209454.1\|	2.3e-113	80.51	hypothetical protein PRUPE_ppa009753mg [Prunus persica]	[more]
gi\|645269028\|ref\|XP_008239808.1\|	3.9e-113	80.14	PREDICTED: microtubule-associated protein RP/EB family member 1A [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001715	CH-domain
IPR004953	EB1_C
IPR027328	MAPRE

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008017	microtubule binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0045298	tubulin complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G008170.1	CmoCh01G008170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001715	Calponin homology domain	GENE3D	G3DSA:1.10.418.10		coord: 6..132 score: 6.2
IPR001715	Calponin homology domain	PFAM	PF00307	CH	coord: 16..114 score: 3.3
IPR001715	Calponin homology domain	unknown	SSF47576	Calponin-homology domain, CH-domain	coord: 5..132 score: 4.3
IPR004953	EB1, C-terminal	PFAM	PF03271	EB1	coord: 204..242 score: 4.4
IPR004953	EB1, C-terminal	PROFILE	PS51230	EB1_C	coord: 179..249 score: 15
IPR004953	EB1, C-terminal	unknown	SSF140612	EB1 dimerisation domain-like	coord: 186..245 score: 5.89
IPR027328	Microtubule-associated protein RP/EB	PANTHER	PTHR10623	MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER	coord: 1..272 score: 9.7E
None	No IPR available	unknown	Coil	Coil	coord: 187..207 scor
None	No IPR available	PANTHER	PTHR10623:SF15	MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1A-RELATED	coord: 1..272 score: 9.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G008170	Cucsa.112600	Cucumber (Gy14) v1	cgycmoB0267
CmoCh01G008170	CmaCh13G011200	Cucurbita maxima (Rimu)	cmacmoB225
CmoCh01G008170	CmaCh01G007770	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G008170	Cla018624	Watermelon (97103) v1	cmowmB446
CmoCh01G008170	Csa1G033010	Cucumber (Chinese Long) v2	cmocuB417
CmoCh01G008170	MELO3C001970	Melon (DHL92) v3.5.1	cmomeB383
CmoCh01G008170	ClCG04G012400	Watermelon (Charleston Gray)	cmowcgB404
CmoCh01G008170	CSPI01G05440	Wild cucumber (PI 183967)	cmocpiB421
CmoCh01G008170	Lsi02G000580	Bottle gourd (USVL1VR-Ls)	cmolsiB396
CmoCh01G008170	Cp4.1LG20g00320	Cucurbita pepo (Zucchini)	cmocpeB444
CmoCh01G008170	Cp4.1LG02g10160	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G008170	MELO3C001970.2	Melon (DHL92) v3.6.1	cmomedB440
CmoCh01G008170	CsaV3_1G005310	Cucumber (Chinese Long) v3	cmocucB0501
CmoCh01G008170	Cla97C04G079390	Watermelon (97103) v2	cmowmbB450
CmoCh01G008170	Bhi08G001639	Wax gourd	cmowgoB0584
CmoCh01G008170	CsGy1G005190	Cucumber (Gy14) v2	cgybcmoB099
CmoCh01G008170	Carg04715	Silver-seed gourd	carcmoB0530
CmoCh01G008170	Carg21663	Silver-seed gourd	carcmoB0070

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G008170	CmoCh13G011730	Cucurbita moschata (Rifu)	cmocmoB172

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G008170	Silver-seed gourd	carcmoB0531
CmoCh01G008170	Cucumber (Chinese Long) v3	cmocucB0502
CmoCh01G008170	Cucumber (Chinese Long) v3	cmocucB0561
CmoCh01G008170	Watermelon (97103) v2	cmowmbB472
CmoCh01G008170	Wax gourd	cmowgoB0596
CmoCh01G008170	Wax gourd	cmowgoB0631
CmoCh01G008170	Cucurbita moschata (Rifu)	cmocmoB363
CmoCh01G008170	Cucurbita pepo (Zucchini)	cmocpeB436