Carg21663 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21663
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Microtubule-associated protein RP/EB
Location	Cucurbita_argyrosperma_scaffold_132 : 70586 .. 72719 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAATATTGGAATGATGGACAGCGCTTATTTTGTCGGTAGGAATGAGATTTTGACATGGATTAACAATTGCCTTCAACTCGATCTCTCTCGCATTGAAGAGGTTTTTCTTTCTGCTTCTTTTGTTCATCCCTTTCGCCATTGTTGTTCTTGGGTTTAATGTTTGTATTGTAATGACTGATGTGGGTTTTCTCTGTTTATGCATTTTGAGTTTCTGGTCGGTCCCCCGTTTCTCCCATCTCTTTCCTTTTGGATATTCATTGTTCGATGTTAGGATATTTGGTGGTATACACGTTTGTGTTTGTAGAAATGCTTGAAAAAGAGGAATCAATTTTTGCTCCAACCTCCAAACATTTTCAAACCATGTTCTTCAGTTGCTTTATTTTTCTGGATTTGGTTGAATTTCTCTACGAACAAATGGAGGTTTCTGGGCAATGGCTAACTATGACATATGATAGTAATTTTGTTACCTTTACTTAAGGAAAGAAATGGGTCATAATGTTCTTGAGTTAATCTCACATTATCCGTTTGCATTATACTCCTCGTTGAGGACTGACTAGTTCCTTGTAAAGATTGAAGCATAGGATAGGAAACCCAGAATGTAGCTGTTTTCGTTTAATCTTAGTGTACAAAACTTGAAATCTACAAGGGTTATTAATGATTATGGGCACTGGATTATGTATGAACTCTAGTGAAACAAAATTTAGTCATGCGAGATTCTCTGAAAAGCTCTCATATTCAGAGATTTTGTCTTAGCCACATTTTCTCAGAGCAAGTCATATGTCTATTATTATGATATTGAATTCATTGCAACTTGCAAGGAAAATTACTATTGGAAGTAATCTTGGTGTGATTATGATCATCTCTCAGTATCCTTTTTGCTGTGTTTGTCGTTCTCCACAGGCTGCATCCGGGGCTGTGCAGTGTCAGATGATTGATATGACCTACCCAGGAGCTGTCCCAATGCATAAGGTTAGTTCCATCTCTTATCCATGTTTGTCTAGATTGTGAGAATAATTATTGGCTACTGTATGATACCGAGTTGTCTGTCTTGGATGTGTTTAAAAGGTCAATTTTGATGCCAAAACTGAGTACGATATGATCCAGAATTACAAGGTTCTTCAGGATGTATTCAATAAGTTGAAAATTGAAAAGGTATGTTATGAAATGGGCAGCCTTTTATCTCAGCTCTTGACATGTCTTGTGGTTGATAGCTAGAAAGATGTTGTTTCCTTTGTTATTTGTGGCAGCATATTGAAGTGAATAGGCTTGTAAAAGGTAGAACACTGGATAACTTGGAATTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTAAACGGTGGCATAATGAATGAGTATGGCTATGCTAATTTTCTCCTACTCTATAAACACTGTCGTGTCTTCTTTCCATTTTGTCATCAATGAATGTCTTTAACAGAAACTATAACCCCGTGGAGCGGCGATGTAAGGGTGTAAAGGGTGGAGTGGTGATGAAGGGCTGCCAGAAGGCTGCTAAATCACTGCAAACACATAATATACATAGCCCTGGCTCTTGTGACCCAGTTGAACCAAGTAAAACTTCTTCTCAGCTTGGTTCACTTATCTATTTTCGTTGGCAATGAGCCATATTTTAAGCTATTCCGCCTTGTCAATCCAGGATCGAAGCCGGGGAAGAACGGCGTAACGAGCAGGGGACATTCTTCTGGAGAAATTCAAGCGTTGTCCAAGGAGGTAGGCTGCAAAACAAAGCCACTGCCAGTTTCTACTTTGCTCTTAGTTGATGATCTTTTTGTTGCAATTCTTCTTTTGAACAGATTACAGAACTGAAACTGTCCGTAGATCTCTTGGAAAAAGAAAGAGATTTCTACTTTGCAAAATTAAGGGATATAGAAATCTTTTGTCAGATGCCTGAATTAGAAGAGCTCCCGGTAAGAGCTCCATGAATGACTGGAAAACGATACTTTTATCAGAACTCTCCTCTGTATAATGATTATACGTTTGATGCAGATGGCAGCAGCAATCAAGATGATTTTGTATGCAGCAGACGCCAAGGAGTCAGCACTAGCAGAGGCTCAAGAGTACATATACCAATCAAAGAACACTACCAACGTTGAAGATGAAAATGAG

mRNA sequence

ATGGCTTCCAATATTGGAATGATGGACAGCGCTTATTTTGTCGGTAGGAATGAGATTTTGACATGGATTAACAATTGCCTTCAACTCGATCTCTCTCGCATTGAAGAGGCTGCATCCGGGGCTGTGCAGTGTCAGATGATTGATATGACCTACCCAGGAGCTGTCCCAATGCATAAGGTCAATTTTGATGCCAAAACTGAGTACGATATGATCCAGAATTACAAGGTTCTTCAGGATGTATTCAATAAGTTGAAAATTGAAAAGCATATTGAAGTGAATAGGCTTGTAAAAGGTAGAACACTGGATAACTTGGAATTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTAAACGGTGGCATAATGAATGAAAACTATAACCCCGTGGAGCGGCGATGTAAGGGTGTAAAGGGTGGAGTGGTGATGAAGGGCTGCCAGAAGGCTGCTAAATCACTGCAAACACATAATATACATAGCCCTGGCTCTTGTGACCCAGTTGAACCAAGATCGAAGCCGGGGAAGAACGGCGTAACGAGCAGGGGACATTCTTCTGGAGAAATTCAAGCGTTGTCCAAGGAGATTACAGAACTGAAACTGTCCGTAGATCTCTTGGAAAAAGAAAGAGATTTCTACTTTGCAAAATTAAGGGATATAGAAATCTTTTGTCAGATGCCTGAATTAGAAGAGCTCCCGATGGCAGCAGCAATCAAGATGATTTTGTATGCAGCAGACGCCAAGGAGTCAGCACTAGCAGAGGCTCAAGAGTACATATACCAATCAAAGAACACTACCAACGTTGAAGATGAAAATGAG

Coding sequence (CDS)

ATGGCTTCCAATATTGGAATGATGGACAGCGCTTATTTTGTCGGTAGGAATGAGATTTTGACATGGATTAACAATTGCCTTCAACTCGATCTCTCTCGCATTGAAGAGGCTGCATCCGGGGCTGTGCAGTGTCAGATGATTGATATGACCTACCCAGGAGCTGTCCCAATGCATAAGGTCAATTTTGATGCCAAAACTGAGTACGATATGATCCAGAATTACAAGGTTCTTCAGGATGTATTCAATAAGTTGAAAATTGAAAAGCATATTGAAGTGAATAGGCTTGTAAAAGGTAGAACACTGGATAACTTGGAATTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTAAACGGTGGCATAATGAATGAAAACTATAACCCCGTGGAGCGGCGATGTAAGGGTGTAAAGGGTGGAGTGGTGATGAAGGGCTGCCAGAAGGCTGCTAAATCACTGCAAACACATAATATACATAGCCCTGGCTCTTGTGACCCAGTTGAACCAAGATCGAAGCCGGGGAAGAACGGCGTAACGAGCAGGGGACATTCTTCTGGAGAAATTCAAGCGTTGTCCAAGGAGATTACAGAACTGAAACTGTCCGTAGATCTCTTGGAAAAAGAAAGAGATTTCTACTTTGCAAAATTAAGGGATATAGAAATCTTTTGTCAGATGCCTGAATTAGAAGAGCTCCCGATGGCAGCAGCAATCAAGATGATTTTGTATGCAGCAGACGCCAAGGAGTCAGCACTAGCAGAGGCTCAAGAGTACATATACCAATCAAAGAACACTACCAACGTTGAAGATGAAAATGAG

Protein sequence

MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSRGHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMILYAADAKESALAEAQEYIYQSKNTTNVEDENE

Homology

[Close]

BLAST of Carg21663 vs. NCBI nr
Match: XP_022949576.1 (microtubule-associated protein RP/EB family member 1B-like [Cucurbita moschata])

HSP 1 Score: 539.3 bits (1388), Expect = 7.7e-150
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQL+LSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR
Sbjct: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
           GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL
Sbjct: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           YAADAKESALAEAQEYIYQSKNTTNVEDENE
Sbjct: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENE 271

[Close]

BLAST of Carg21663 vs. NCBI nr
Match: XP_022998831.1 (microtubule-associated protein RP/EB family member 1B-like [Cucurbita maxima])

HSP 1 Score: 534.6 bits (1376), Expect = 1.9e-148
Identity = 267/271 (98.52%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQL+LSRIEEAASGAVQCQMID+TYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDVTYPGAVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTS+
Sbjct: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSK 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
           GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL
Sbjct: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           YAADAKESALAEAQEYIYQSKNTTNVEDE+E
Sbjct: 241 YAADAKESALAEAQEYIYQSKNTTNVEDEHE 271

[Close]

BLAST of Carg21663 vs. NCBI nr
Match: XP_023523384.1 (microtubule-associated protein RP/EB family member 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 513.1 bits (1320), Expect = 5.9e-142
Identity = 258/271 (95.20%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQL+LSRIEEAASGAVQCQMIDMTYPG+VPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGSVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERR        +MKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR
Sbjct: 121 IMNENYNPVERRXXXXXXXXMMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
            HSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIK+IL
Sbjct: 181 AHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKLIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           YAADAKESALAEAQEYIYQSKNTTNVEDENE
Sbjct: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENE 271

[Close]

BLAST of Carg21663 vs. NCBI nr
Match: XP_008440447.1 (PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cucumis melo])

HSP 1 Score: 496.9 bits (1278), Expect = 4.4e-137
Identity = 250/271 (92.25%), Postives = 258/271 (95.20%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQL+LSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERRCKG KGG  MKGCQKAAKSLQTHN+HS GS D VEPRSKPGKNG+T  
Sbjct: 121 IMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGITGG 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
            +SS EIQALSKEITELK+SVDLLEKERDFYFAKLRDIEIFCQMPELE+LPMAAAIKMIL
Sbjct: 181 TNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           YAADAKESAL EAQEYIYQS+N T+VEDENE
Sbjct: 241 YAADAKESALTEAQEYIYQSQNRTDVEDENE 271

[Close]

BLAST of Carg21663 vs. NCBI nr
Match: XP_004137403.1 (PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 1.6e-134
Identity = 247/271 (91.14%), Postives = 256/271 (94.46%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQL+LSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERRCKG KGG  MKGCQKAAKSLQTHN+HS GS D VEPRSKPGKNGVT  
Sbjct: 121 IMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGVTGG 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
            +SS EIQALSKEITELK+SVDLLEKERDFYFAKLRDIEIFCQM ELE+LPM AAIKMIL
Sbjct: 181 TNSSTEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMSELEDLPMTAAIKMIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           YAADAKESAL EAQEYIYQS+N ++VE+ENE
Sbjct: 241 YAADAKESALTEAQEYIYQSQNRSDVENENE 271

[Close]

BLAST of Carg21663 vs. TAIR10
Match: AT5G62500.1 (end binding protein 1B)

HSP 1 Score: 358.2 bits (918), Expect = 4.4e-99
Identity = 184/266 (69.17%), Postives = 216/266 (81.20%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEIL+WIN+ L L+LSRIEEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NF+AK EY+MIQNYKV+Q+VF KLKI K +EVNRLVKGR LDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPG------K 180
           IMNENYNPVERR +G +   V KG  K +KSLQT+N+H P    PV   +KP        
Sbjct: 121 IMNENYNPVERRSRGGREKSV-KGSSKISKSLQTNNMHHP----PVATSNKPAGPKQAKS 180

Query: 181 NGVTSRGHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAA 240
           +G+    +SS E+QALSKE+ +LK+SVDLLEKERDFYF+KLRDIEI CQ PEL++LP+  
Sbjct: 181 HGIGGGSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIVV 240

Query: 241 AIKMILYAADAKESALAEAQEYIYQS 261
           A+K ILYA DA ES L EAQE + QS
Sbjct: 241 AVKKILYATDANESVLEEAQECLNQS 261

[Close]

BLAST of Carg21663 vs. TAIR10
Match: AT3G47690.1 (microtubule end binding protein EB1A)

HSP 1 Score: 351.7 bits (901), Expect = 4.1e-97
Identity = 182/269 (67.66%), Postives = 210/269 (78.07%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEILTWIN+ L L+LSR+EEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAK EYDMIQNYKVLQDVFNKLKI K +E+NRLVKGR LDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERR +  K   V KG  K  KSLQT+N     +   V      G      +
Sbjct: 121 IMNENYNPVERRSRNGKERSV-KGSNKIPKSLQTNNXXXXXNSSSVGLSKASG-----PK 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
              + E+QALSKE+ +LK+S DLLEKERDFYF+KLRD+EI CQ PEL++LP+  A+K IL
Sbjct: 181 SAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIVVAVKKIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDE 270
           YA DA ESAL +AQEY+ QS    + E E
Sbjct: 241 YATDANESALEDAQEYLNQSLGVEDDEAE 263

[Close]

BLAST of Carg21663 vs. TAIR10
Match: AT5G67270.1 (end binding protein 1C)

HSP 1 Score: 259.2 bits (661), Expect = 2.8e-69
Identity = 140/270 (51.85%), Postives = 169/270 (62.59%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGR+EIL WIN+ LQL+LS++EEA SGAV CQ++D  +PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAK+EY+MIQNYKVLQDVFNKLKI KHIEV++LVKGR LDNLEF+QW+K+YCDSVNGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120

Query: 121 IMNENYNPVER----------------RCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCD 180
               NY+ +ER                                                 
Sbjct: 121 --QHNYHALERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 PVEPRSKPGKNGVTSRGHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQM 240
                              S  + A  ++ITELKL +D LEKERDFYF+KLRD+EI CQ 
Sbjct: 181 XXXXXXXXXXXXXXXXAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEILCQN 240

Query: 241 PELEELPMAAAIKMILYAADAKESALAEAQ 255
           P+ E LP+  +IK ILYAAD ++   AE Q
Sbjct: 241 PDTEHLPLVGSIKRILYAADGEDVGAAETQ 268

[Close]

BLAST of Carg21663 vs. Swiss-Prot
Match: sp|Q9FJJ5|EB1B_ARATH (Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX=3702 GN=EB1B PE=1 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 7.9e-98
Identity = 184/266 (69.17%), Postives = 216/266 (81.20%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEIL+WIN+ L L+LSRIEEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NF+AK EY+MIQNYKV+Q+VF KLKI K +EVNRLVKGR LDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPG------K 180
           IMNENYNPVERR +G +   V KG  K +KSLQT+N+H P    PV   +KP        
Sbjct: 121 IMNENYNPVERRSRGGREKSV-KGSSKISKSLQTNNMHHP----PVATSNKPAGPKQAKS 180

Query: 181 NGVTSRGHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAA 240
           +G+    +SS E+QALSKE+ +LK+SVDLLEKERDFYF+KLRDIEI CQ PEL++LP+  
Sbjct: 181 HGIGGGSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIVV 240

Query: 241 AIKMILYAADAKESALAEAQEYIYQS 261
           A+K ILYA DA ES L EAQE + QS
Sbjct: 241 AVKKILYATDANESVLEEAQECLNQS 261

[Close]

BLAST of Carg21663 vs. Swiss-Prot
Match: sp|Q7XJ60|EB1A_ARATH (Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX=3702 GN=EB1A PE=1 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 7.4e-96
Identity = 182/269 (67.66%), Postives = 210/269 (78.07%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEILTWIN+ L L+LSR+EEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAK EYDMIQNYKVLQDVFNKLKI K +E+NRLVKGR LDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERR +  K   V KG  K  KSLQT+N     +   V      G      +
Sbjct: 121 IMNENYNPVERRSRNGKERSV-KGSNKIPKSLQTNNXXXXXNSSSVGLSKASG-----PK 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
              + E+QALSKE+ +LK+S DLLEKERDFYF+KLRD+EI CQ PEL++LP+  A+K IL
Sbjct: 181 SAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIVVAVKKIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDE 270
           YA DA ESAL +AQEY+ QS    + E E
Sbjct: 241 YATDANESALEDAQEYLNQSLGVEDDEAE 263

[Close]

BLAST of Carg21663 vs. Swiss-Prot
Match: sp|Q9FGQ6|EB1C_ARATH (Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX=3702 GN=EB1C PE=1 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.0e-68
Identity = 140/270 (51.85%), Postives = 169/270 (62.59%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGR+EIL WIN+ LQL+LS++EEA SGAV CQ++D  +PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAK+EY+MIQNYKVLQDVFNKLKI KHIEV++LVKGR LDNLEF+QW+K+YCDSVNGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120

Query: 121 IMNENYNPVER----------------RCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCD 180
               NY+ +ER                                                 
Sbjct: 121 --QHNYHALERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 PVEPRSKPGKNGVTSRGHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQM 240
                              S  + A  ++ITELKL +D LEKERDFYF+KLRD+EI CQ 
Sbjct: 181 XXXXXXXXXXXXXXXXAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEILCQN 240

Query: 241 PELEELPMAAAIKMILYAADAKESALAEAQ 255
           P+ E LP+  +IK ILYAAD ++   AE Q
Sbjct: 241 PDTEHLPLVGSIKRILYAADGEDVGAAETQ 268

[Close]

BLAST of Carg21663 vs. Swiss-Prot
Match: sp|Q66T82|MARE1_COTJA (Microtubule-associated protein RP/EB family member 1 OS=Coturnix japonica OX=93934 GN=MAPRE1 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39
Identity = 104/253 (41.11%), Postives = 144/253 (56.92%), Query Frame = 0


Query: 14  VGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQN 73
           + R+++L WIN  LQL L++IE+  SGA  CQ +DM +PG+V + KV F AK E++ IQN
Sbjct: 15  LSRHDMLAWINESLQLTLTKIEQLCSGAAYCQFMDMLFPGSVALKKVKFQAKLEHEYIQN 74

Query: 74  YKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR- 133
           +KVLQ  F ++ ++K I V++LVKG+  DN EF+QW K++ D+   G   + Y+PV  R 
Sbjct: 75  FKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAARQ 134

Query: 134 -CKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPV----EPRSKPGKNGVTSRGHSSGEI 193
             + V   +V     K  K L T    S G   P+     P +  G  G+  +     E 
Sbjct: 135 GQETVAPNLVAPVMNKPKKPLGT---GSAGPQRPIVAQRTPATPKGGTGMVKKAAGDDES 194

Query: 194 QALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMILYAAD--- 253
             L ++I  LKL+V+ LEKERDFYF KLR+IE+ CQ  E E  P+   I  ILYA D   
Sbjct: 195 AGLIEQINVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVEILYATDEGF 254

Query: 254 --AKESALAEAQE 256
               E A  E QE
Sbjct: 255 VIPDEGAPQEEQE 261

[Close]

BLAST of Carg21663 vs. Swiss-Prot
Match: sp|Q6P848|MARE1_XENTR (Microtubule-associated protein RP/EB family member 1 OS=Xenopus tropicalis OX=8364 GN=mapre1 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39
Identity = 99/241 (41.08%), Postives = 145/241 (60.17%), Query Frame = 0


Query: 14  VGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQN 73
           + R+++L WIN  LQL+L++IE+  SG+V CQ +DM +PG+V + KV F AK E++ IQN
Sbjct: 15  LSRHDMLAWINESLQLNLTKIEQLCSGSVYCQFMDMLFPGSVVLKKVKFQAKLEHEYIQN 74

Query: 74  YKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
           +KVLQ  F K+ ++K I V++LVKG+  DN EF+QW K++ D+   G   ++Y+PV  R 
Sbjct: 75  FKVLQAGFKKMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAARQ 134

Query: 134 KGVKGGVVMKGC---QKAAKSLQTHNIHSPGSCDPVE---PRSKPGKNGVTSR----GHS 193
                 V +       K  K L + N  +P    PV+     +KP   G++ +    G+ 
Sbjct: 135 GQESAPVPVLAAPVLNKPKKPLGSGNT-APQRTVPVQRTAVSNKPPAQGISKKPATVGNG 194

Query: 194 SGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMILYAA 245
             E   L ++I  LK++V+ LEKERDFYF KLR+IE+ CQ  E E  P+   I  ILYA 
Sbjct: 195 DDESAELIQQINVLKITVEDLEKERDFYFGKLRNIELICQENEGESDPVLQRIIEILYAT 251

[Close]

BLAST of Carg21663 vs. TrEMBL
Match: tr|A0A1S3B162|A0A1S3B162_CUCME (microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484862 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 2.9e-137
Identity = 250/271 (92.25%), Postives = 258/271 (95.20%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQL+LSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERRCKG KGG  MKGCQKAAKSLQTHN+HS GS D VEPRSKPGKNG+T  
Sbjct: 121 IMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGITGG 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
            +SS EIQALSKEITELK+SVDLLEKERDFYFAKLRDIEIFCQMPELE+LPMAAAIKMIL
Sbjct: 181 TNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           YAADAKESAL EAQEYIYQS+N T+VEDENE
Sbjct: 241 YAADAKESALTEAQEYIYQSQNRTDVEDENE 271

[Close]

BLAST of Carg21663 vs. TrEMBL
Match: tr|A0A1S3B232|A0A1S3B232_CUCME (microtubule-associated protein RP/EB family member 1B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484862 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 4.8e-116
Identity = 215/236 (91.10%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 36  EAASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRL 95
           +AASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRL
Sbjct: 7   KAASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRL 66

Query: 96  VKGRTLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTH 155
           VKGR LDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKG KGG  MKGCQKAAKSLQTH
Sbjct: 67  VKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTH 126

Query: 156 NIHSPGSCDPVEPRSKPGKNGVTSRGHSSGEIQALSKEITELKLSVDLLEKERDFYFAKL 215
           N+HS GS D VEPRSKPGKNG+T   +SS EIQALSKEITELK+SVDLLEKERDFYFAKL
Sbjct: 127 NMHSHGSGDSVEPRSKPGKNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKL 186

Query: 216 RDIEIFCQMPELEELPMAAAIKMILYAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           RDIEIFCQMPELE+LPMAAAIKMILYAADAKESAL EAQEYIYQS+N T+VEDENE
Sbjct: 187 RDIEIFCQMPELEDLPMAAAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENE 242

[Close]

BLAST of Carg21663 vs. TrEMBL
Match: tr|M5WMZ4|M5WMZ4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G189900 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 1.9e-112
Identity = 221/276 (80.07%), Postives = 235/276 (85.14%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIG+MDSAYFVGRNEILTWINN LQL+LSRIEEAASGAVQCQM+DMTYPG VPMHKV
Sbjct: 1   MASNIGIMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQ+VFNKLKIEKH+EVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHLEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPV----EPRSKPGKNG 180
           IMNENYNPVERRCKG K     KG QK +KSLQT+N+H+PGS D V        K GK  
Sbjct: 121 IMNENYNPVERRCKGGKDR-YPKGSQKFSKSLQTNNLHNPGSGDTVGLSKTSGPKQGKPY 180

Query: 181 VTSRG-HSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAA 240
             + G +SSGE+QALSKEIT+LKLSVDLLEKERDFYFAKLRDIEI CQ  ELEELPMA A
Sbjct: 181 AAAGGANSSGEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTSELEELPMAVA 240

Query: 241 IKMILYAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           IK ILYAADAKES LAEAQEY+YQS N    E E E
Sbjct: 241 IKKILYAADAKESPLAEAQEYLYQSMNADEKEAETE 275

[Close]

BLAST of Carg21663 vs. TrEMBL
Match: tr|A0A0A0LT98|A0A0A0LT98_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033010 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 2.1e-111
Identity = 216/271 (79.70%), Postives = 230/271 (84.87%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQL+LSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEK+  +N +                R+C  +   
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKYWIINSV--------------FFRFCPQLFLE 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
             N NYNPVERRCKG KGG  MKGCQKAAKSLQTHN+HS GS D VEPRSKPGKNGVT  
Sbjct: 121 CHNRNYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGVTGG 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
            +SS EIQALSKEITELK+SVDLLEKERDFYFAKLRDIEIFCQM ELE+LPM AAIKMIL
Sbjct: 181 TNSSTEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMSELEDLPMTAAIKMIL 240

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           YAADAKESAL EAQEYIYQS+N ++VE+ENE
Sbjct: 241 YAADAKESALTEAQEYIYQSQNRSDVENENE 257

[Close]

BLAST of Carg21663 vs. TrEMBL
Match: tr|A0A1S3B136|A0A1S3B136_CUCME (microtubule-associated protein RP/EB family member 1B isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484862 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 3.9e-110
Identity = 214/271 (78.97%), Postives = 220/271 (81.18%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLDLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQL+LSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120
           NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180
           IMNENYNPVERRCKG KGG  MKGCQKAAKSLQTHN+HS GS D VEPRSKPGKNG+T  
Sbjct: 121 IMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGITGG 180

Query: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240
            +SS EIQALSKE                                      MAAAIKMIL
Sbjct: 181 TNSSAEIQALSKE--------------------------------------MAAAIKMIL 233

Query: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENE 272
           YAADAKESAL EAQEYIYQS+N T+VEDENE
Sbjct: 241 YAADAKESALTEAQEYIYQSQNRTDVEDENE 233

The following BLAST results are available for this feature:

BLAST of Carg21663 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949576.1	7.7e-150	99.63	microtubule-associated protein RP/EB family member 1B-like [Cucurbita moschata]	[more]
XP_022998831.1	1.9e-148	98.52	microtubule-associated protein RP/EB family member 1B-like [Cucurbita maxima]	[more]
XP_023523384.1	5.9e-142	95.20	microtubule-associated protein RP/EB family member 1B-like [Cucurbita pepo subsp...	[more]
XP_008440447.1	4.4e-137	92.25	PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cuc...	[more]
XP_004137403.1	1.6e-134	91.14	PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cuc...	[more]

BLAST of Carg21663 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62500.1	4.4e-99	69.17	end binding protein 1B	[more]
AT3G47690.1	4.1e-97	67.66	microtubule end binding protein EB1A	[more]
AT5G67270.1	2.8e-69	51.85	end binding protein 1C	[more]

BLAST of Carg21663 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FJJ5\|EB1B_ARATH	7.9e-98	69.17	Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX...	[more]
sp\|Q7XJ60\|EB1A_ARATH	7.4e-96	67.66	Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX...	[more]
sp\|Q9FGQ6\|EB1C_ARATH	5.0e-68	51.85	Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX...	[more]
sp\|Q66T82\|MARE1_COTJA	2.9e-39	41.11	Microtubule-associated protein RP/EB family member 1 OS=Coturnix japonica OX=939...	[more]
sp\|Q6P848\|MARE1_XENTR	2.9e-39	41.08	Microtubule-associated protein RP/EB family member 1 OS=Xenopus tropicalis OX=83...	[more]

BLAST of Carg21663 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B162\|A0A1S3B162_CUCME	2.9e-137	92.25	microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucumis melo...	[more]
tr\|A0A1S3B232\|A0A1S3B232_CUCME	4.8e-116	91.10	microtubule-associated protein RP/EB family member 1B isoform X2 OS=Cucumis melo...	[more]
tr\|M5WMZ4\|M5WMZ4_PRUPE	1.9e-112	80.07	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G189900 PE=4 SV=1	[more]
tr\|A0A0A0LT98\|A0A0A0LT98_CUCSA	2.1e-111	79.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033010 PE=4 SV=1	[more]
tr\|A0A1S3B136\|A0A1S3B136_CUCME	3.9e-110	78.97	microtubule-associated protein RP/EB family member 1B isoform X3 OS=Cucumis melo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008017	microtubule binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036133	EB1_C_sf
IPR027328	MAPRE
IPR004953	EB1_C
IPR036872	CH_dom_sf
IPR001715	CH-domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0045298	tubulin complex
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21663-RA	Carg21663-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 187..207
None	No IPR available	GENE3D	G3DSA:1.20.5.1160		coord: 185..224 e-value: 1.3E-5 score: 26.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..185
None	No IPR available	PANTHER	PTHR10623:SF29	MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1A-RELATED	coord: 2..269
IPR001715	Calponin homology domain	PFAM	PF00307	CH	coord: 16..114 e-value: 1.6E-10 score: 41.0
IPR001715	Calponin homology domain	PROSITE	PS50021	CH	coord: 13..115 score: 16.944
IPR036872	CH domain superfamily	GENE3D	G3DSA:1.10.418.10		coord: 4..133 e-value: 1.6E-45 score: 156.5
IPR036872	CH domain superfamily	SUPERFAMILY	SSF47576	Calponin-homology domain, CH-domain	coord: 5..132
IPR004953	EB1, C-terminal	PFAM	PF03271	EB1	coord: 204..242 e-value: 1.6E-18 score: 66.6
IPR004953	EB1, C-terminal	PROSITE	PS51230	EB1_C	coord: 179..249 score: 15.194
IPR027328	Microtubule-associated protein RP/EB	PANTHER	PTHR10623	MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER	coord: 2..269
IPR036133	EB1, C-terminal domain superfamily	SUPERFAMILY	SSF140612	EB1 dimerisation domain-like	coord: 186..245

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21663	Cla018624	Watermelon (97103) v1	carwmB0055
Carg21663	Csa1G033010	Cucumber (Chinese Long) v2	carcuB0052
Carg21663	MELO3C001970	Melon (DHL92) v3.5.1	carmeB0053
Carg21663	ClCG04G012400	Watermelon (Charleston Gray)	carwcgB0054
Carg21663	CSPI01G05440	Wild cucumber (PI 183967)	carcpiB0056
Carg21663	Cucsa.112600	Cucumber (Gy14) v1	carcgyB0060
Carg21663	CmaCh01G007770	Cucurbita maxima (Rimu)	carcmaB0067
Carg21663	CmaCh13G011200	Cucurbita maxima (Rimu)	carcmaB0064
Carg21663	CmoCh01G008170	Cucurbita moschata (Rifu)	carcmoB0070
Carg21663	CmoCh13G011730	Cucurbita moschata (Rifu)	carcmoB0067
Carg21663	Lsi02G000580	Bottle gourd (USVL1VR-Ls)	carlsiB047
Carg21663	Cp4.1LG20g00320	Cucurbita pepo (Zucchini)	carcpeB0072
Carg21663	Cp4.1LG02g10160	Cucurbita pepo (Zucchini)	carcpeB0073
Carg21663	CsGy1G005190	Cucumber (Gy14) v2	carcgybB0052
Carg21663	MELO3C001970.2	Melon (DHL92) v3.6.1	carmedB0054
Carg21663	CsaV3_1G005310	Cucumber (Chinese Long) v3	carcucB0058
Carg21663	Cla97C04G079390	Watermelon (97103) v2	carwmbB0051
Carg21663	Bhi08G001639	Wax gourd	carwgoB0060

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21663	Silver-seed gourd	carcarB056
Carg21663	Silver-seed gourd	carcarB059
Carg21663	Silver-seed gourd	carcarB062
Carg21663	Cucumber (Gy14) v2	carcgybB0054
Carg21663	Cucumber (Gy14) v1	carcgyB0062
Carg21663	Cucurbita maxima (Rimu)	carcmaB0066
Carg21663	Cucurbita maxima (Rimu)	carcmaB0068
Carg21663	Cucurbita moschata (Rifu)	carcmoB0069
Carg21663	Cucurbita moschata (Rifu)	carcmoB0071
Carg21663	Cucurbita pepo (Zucchini)	carcpeB0067
Carg21663	Cucurbita pepo (Zucchini)	carcpeB0069
Carg21663	Wild cucumber (PI 183967)	carcpiB0058
Carg21663	Cucumber (Chinese Long) v2	carcuB0054
Carg21663	Cucumber (Chinese Long) v3	carcucB0060
Carg21663	Bottle gourd (USVL1VR-Ls)	carlsiB048
Carg21663	Watermelon (Charleston Gray)	carwcgB0055
Carg21663	Watermelon (97103) v1	carwmB0054
Carg21663	Watermelon (97103) v2	carwmbB0053
Carg21663	Watermelon (97103) v2	carwmbB0052
Carg21663	Wax gourd	carwgoB0062
Carg21663	Wax gourd	carwgoB0063