CmoCh01G003650 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G003650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	E3 ubiquitin-protein ligase (6.3.2.-)
Location	Cmo_Chr01 : 1772937 .. 1775208 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTTTACGCTCTCAGTCTGAAGAAGAGAAGAGGCTGACTTGAAGAAGAAGAAGAAGAAATAAAAAATGGCGGGTTCTCGATCATCGGACGGCGAAAAGGAGAGGCGAAGTTCGGCCAACTCTAGCAGACGGAAGAACGAGACGATGAAAGTCATACTTACCGATCCTCAAGTTCTCGATTGCTATATTTGTTGCGAGCCCTTGTCCGTTCCTGTTTACCAGGTTCGATTAAGCTTTTTTTTCCGCTTGCATTTTGCTTACGATTACTGTTCTTGTTAATCTGCTTGTCTATGATGCTTTGTTCTTCTCGTCCATTTTTTTTTCTTGCAATTTTGACTTCTGTAGTTCACTTAGTGTGTTTGCTGGATTTGACGGTTTCCAAATCCCCCTTACTATGAGATTTTAACCTTCTCGTTTAGAATTTTATTGTGTAGACTGTGGATTTCCAGTGGAAGTTATGGATTATGATAAAAATTGAAGAAATATGGCGAAGTTTTGAACAGTTATTGGCAAAGATCGTGGAGGTATGGATTGTAGAACTGAAGTTATCAAATGTTTTGATGCAAATAATCTTTGAACATGAAAATTATTCTGGATATTATGGGGACATAATCACAAATGGTTGGGATTGAAATGAAACTTTGTTGAGGATTGTTCGAGTCTACCATTGGCTATGAGGAAGACTATGAGTATATAAGCAACGGATACTATCTTCATTGGTATGAGGCCTTTTGGAGAAACCAAAAGTAAAGCCATGAGAGCTTATCACATCATTGTGGCCCACATGTTTCAATAAAGTAGTATCATAGTCTTACTCTTATCTTAACTTAGTAGTGTCAATAAATCCTCAGGTGTTGAATAAAAAAAAGTTGTGTTTCTAGAAGGTGTGACTTAGATGTCGAACAAAAAAGAAAAAGTGAGCCTCGAAACTGTAGTCATAGAGAAGATCCATGGTAGAGCTCTATTGAACTATCAATGTGCTCTAAAGAAGAGGAGTCGTCTAAAATAGTGCTAAGATAGATAGATGACTATTAAGAAGAGACACAATAATGTACTTTGTTGAAGGGAAGATTGTTGAGGATTGTTGGAGTCTCATATTGGCTAATTAAGATGGAAGACCGTGGGTATATAAATAAGGGACACTATTTTCTTTGGTATGAAGCATTTAGGGAAACCAAAGACAAAGCCATGAGAGCTTATACTCAAAGTGTACAATATCATTCTAATACGAAGGTCCCTTGTTCCTATCAATCTTGCCCTGAATTGCTTTTCTTGTTACATTATCTCGAGCAAATGCCAGAAATCAAGCCGTGCTTATTTGATATTCTTTTCACCTTGAACTTGAAAGGGATGAATATAGAAGAAAATAAGCATATATTGGTGTATATAATCTCTTTTCTTGTCATCTTTGAGTCTATTTTATGTCATAGCATATACTTTGGTGTTGAGATGTTGATTGTTGGATGAATTAGTGTGAGAATGGGCATATTTCTTGCTCTAGCTGCTGCTCCAAAGTTCAGAATAAATGCCCTAGCTGCAGCTTGGCAATTGGCTACATGCGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATTAAGATGCCCTGCCAAAACTCAAGATACGGATGCAAAACTACAACGAATTTGAACCAAATAAATGAGCATGAGACATTGTGCCCATATCAACCCTGTTCGTGCCCTTTATCTGATTGCTCTTATGTTGATTCGGCAGAGTATTTGAGCTCACACTTCAGAAAAAGGCACCAAGACTCCGCCAAAAGCATCTCATACAATTCAAGGTTCACAATATGCTTGAACAGTGATGATAAATATTGTATCTTTCAAGCAGAGAACGATGGTGTTTTGTTTGTCCTCTCTTACTCGTTCGAAACTTTTGGTGATGCGGTTACTTTGAATCGGATTGGACCTCGGTCGTCTGAGAAAAAGTTTTGTTATGATATTAAAGCCAAATCACAGGGGAGTGTTCTTTCTTTGCTATCAGTGGCGAAGGAGATCCAACGTTGGACTGAAGATCCTCCTTCCAAGGGATCGCTTTTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGAAGACCAACACTGAGGATCATCACAGGTGCACATTCATTTTAAAACAAAGCTGAATTATTGTTTAAACTGTCTTAAACGTTGTTGGCTGGCTCTGATCTTTGTCACCTAAACTGTTCATCTGGGGGGGAAGGACTTGGTGCATG

mRNA sequence

TAGTTTACGCTCTCAGTCTGAAGAAGAGAAGAGGCTGACTTGAAGAAGAAGAAGAAGAAATAAAAAATGGCGGGTTCTCGATCATCGGACGGCGAAAAGGAGAGGCGAAGTTCGGCCAACTCTAGCAGACGGAAGAACGAGACGATGAAAGTCATACTTACCGATCCTCAAGTTCTCGATTGCTATATTTGTTGCGAGCCCTTGTCCGTTCCTGTTTACCAGACTGTGGATTTCCAGTGGAAGTTATGGATTATGATAAAAATTGAAGAAATATGGCGAAGTTTTGAACAGTTATTGGCAAAGATCGTGGAGTGTGAGAATGGGCATATTTCTTGCTCTAGCTGCTGCTCCAAAGTTCAGAATAAATGCCCTAGCTGCAGCTTGGCAATTGGCTACATGCGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATTAAGATGCCCTGCCAAAACTCAAGATACGGATGCAAAACTACAACGAATTTGAACCAAATAAATGAGCATGAGACATTGTGCCCATATCAACCCTGTTCGTGCCCTTTATCTGATTGCTCTTATGTTGATTCGGCAGAGTATTTGAGCTCACACTTCAGAAAAAGGCACCAAGACTCCGCCAAAAGCATCTCATACAATTCAAGGTTCACAATATGCTTGAACAGTGATGATAAATATTGTATCTTTCAAGCAGAGAACGATGGTGTTTTGTTTGTCCTCTCTTACTCGTTCGAAACTTTTGGTGATGCGGTTACTTTGAATCGGATTGGACCTCGGTCGTCTGAGAAAAAGTTTTGTTATGATATTAAAGCCAAATCACAGGGGAGTGTTCTTTCTTTGCTATCAGTGGCGAAGGAGATCCAACGTTGGACTGAAGATCCTCCTTCCAAGGGATCGCTTTTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGAAGACCAACACTGAGGATCATCACAGGTGCACATTCATTTTAAAACAAAGCTGAATTATTGTTTAAACTGTCTTAAACGTTGTTGGCTGGCTCTGATCTTTGTCACCTAAACTGTTCATCTGGGGGGGAAGGACTTGGTGCATG

Coding sequence (CDS)

ATGGCGGGTTCTCGATCATCGGACGGCGAAAAGGAGAGGCGAAGTTCGGCCAACTCTAGCAGACGGAAGAACGAGACGATGAAAGTCATACTTACCGATCCTCAAGTTCTCGATTGCTATATTTGTTGCGAGCCCTTGTCCGTTCCTGTTTACCAGACTGTGGATTTCCAGTGGAAGTTATGGATTATGATAAAAATTGAAGAAATATGGCGAAGTTTTGAACAGTTATTGGCAAAGATCGTGGAGTGTGAGAATGGGCATATTTCTTGCTCTAGCTGCTGCTCCAAAGTTCAGAATAAATGCCCTAGCTGCAGCTTGGCAATTGGCTACATGCGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATTAAGATGCCCTGCCAAAACTCAAGATACGGATGCAAAACTACAACGAATTTGAACCAAATAAATGAGCATGAGACATTGTGCCCATATCAACCCTGTTCGTGCCCTTTATCTGATTGCTCTTATGTTGATTCGGCAGAGTATTTGAGCTCACACTTCAGAAAAAGGCACCAAGACTCCGCCAAAAGCATCTCATACAATTCAAGGTTCACAATATGCTTGAACAGTGATGATAAATATTGTATCTTTCAAGCAGAGAACGATGGTGTTTTGTTTGTCCTCTCTTACTCGTTCGAAACTTTTGGTGATGCGGTTACTTTGAATCGGATTGGACCTCGGTCGTCTGAGAAAAAGTTTTGTTATGATATTAAAGCCAAATCACAGGGGAGTGTTCTTTCTTTGCTATCAGTGGCGAAGGAGATCCAACGTTGGACTGAAGATCCTCCTTCCAAGGGATCGCTTTTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGA

Homology

[Close]

BLAST of CmoCh01G003650 vs. Swiss-Prot
Match: SIL10_ARATH (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.9e-47
Identity = 109/306 (35.62%), Postives = 164/306 (53.59%), Query Frame = 1


Query: 3   GSRSSDGEKE-----RR-----SSANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQ 62
           GS S D ++E     RR     +S +SS  K+  + V L DP VLDC ICCEPL +P++Q
Sbjct: 67  GSTSDDSDREVVIEERRFGKFVNSQSSSSSKDSPLSVTLLDPDVLDCPICCEPLKIPIFQ 126

Query: 63  TVDFQWKLWIMIKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMR 122
                                         C+NGH++C+ CC+KV+N+CPSC+L IGY+R
Sbjct: 127 ------------------------------CDNGHLACTLCCTKVRNRCPSCTLPIGYVR 186

Query: 123 CRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLS 182
           CRA+EKV+E+ ++ C N++YGCK +T+      HE +C + PCSCP+ DC Y    + L+
Sbjct: 187 CRAMEKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLN 246

Query: 183 SHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRI 242
           +H R  H+D   S  +N+R TI L+ + K  I Q ENDG + V+          V+++ I
Sbjct: 247 NHVRAEHKDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCI 306

Query: 243 GPRS-SEKKFCYDIKAKSQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTI 298
            P +    +    +   +  S+L    + K IQ+ T + P  G +LIP+  F   S    
Sbjct: 307 APLTPGVGRLSCRLAKITVDSLLKQGFMVKNIQKVTNEHPEDGFMLIPSYLF---SGNDN 339

[Close]

BLAST of CmoCh01G003650 vs. Swiss-Prot
Match: SINL7_ARATH (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-33
Identity = 89/298 (29.87%), Postives = 146/298 (48.99%), Query Frame = 1


Query: 3   GSRSSDGEKERRSSANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWI 62
           GS S   +K + SS+++++R  +    +L D ++LDC IC E  ++P++Q          
Sbjct: 15  GSNSILSQKRQLSSSDAAKRDAKKRSTMLMDLEILDCPICYEAFTIPIFQ---------- 74

Query: 63  MIKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLES 122
                               C+NGH++CSSCC K+ NKCP+C+  +G+ RCRA+E VLES
Sbjct: 75  --------------------CDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLES 134

Query: 123 IKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQD- 182
           I +PC N++ GCK   +  +   HE  C +  C+CP  DC+Y  S + L +H+R  H + 
Sbjct: 135 ILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRITHMEI 194

Query: 183 -SAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSE-K 242
               +   +   ++ +N   K  I        LF +    E +G  VT++ I P S E  
Sbjct: 195 NQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAPSSPELS 254

Query: 243 KFCYDIKAKSQG-SVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRI 297
           ++ Y +     G +V+      K + + +   P +  +LIPN          +LE+RI
Sbjct: 255 QYSYALSYTVDGHTVIYQSPEVKRVLKLSFQTPQENFMLIPNSLLRGD----VLEMRI 278

[Close]

BLAST of CmoCh01G003650 vs. Swiss-Prot
Match: SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g37870 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-33
Identity = 88/282 (31.21%), Postives = 146/282 (51.77%), Query Frame = 1


Query: 8   DGEKERRSSANSS----RRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWIM 67
           +G ++R  S+ SS    +R ++T   +LTD  +LDC IC + L +PV+Q           
Sbjct: 10  NGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQ----------- 69

Query: 68  IKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESI 127
                              C NGH++CSSCC K++NKCP+C+L +G++RCRA+E+VLES+
Sbjct: 70  -------------------CGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESV 129

Query: 128 KMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSA 187
            +PC+ +  GC  T    + + HE +C + PCSCP+  C+Y  S + L  H+   H   +
Sbjct: 130 LVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGS 189

Query: 188 KSISYN--SRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSE-KK 247
            + S+N  S     +   DK  I +     +LFV+    E  G  V+++ I P + E  +
Sbjct: 190 TAYSFNGVSYIAAMMFISDKILIERVYEKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGE 249

Query: 248 FCYDIKAKS-QGSVLSLLS-VAKEIQRWTEDPPSKGSLLIPN 281
           F Y +   + +G  ++  S   K++ + +   P    +LIP+
Sbjct: 250 FSYGLLYTTWEGVTMTYQSPKVKKVLKVSSQRPKDSFMLIPH 261

[Close]

BLAST of CmoCh01G003650 vs. Swiss-Prot
Match: SINL4_ARATH (E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana GN=At1g66650 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.3e-33
Identity = 92/269 (34.20%), Postives = 132/269 (49.07%), Query Frame = 1


Query: 21  RRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWIMIKIEEIWRSFEQLLAKI 80
           RR +    V L +  VL+C  C +PL  P++Q                            
Sbjct: 68  RRVSSPKSVTLPNSNVLECPNCFDPLKKPIFQ---------------------------- 127

Query: 81  VECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESIKMPCQNSRYGCK-TTTN 140
             C NGH++C  CC K++ +C  C L IG +RCRA+EKV+++  + C N+ YGCK +TT 
Sbjct: 128 --CNNGHLACFLCCIKLKKRCSFCKLPIGDVRCRAMEKVIKAGLVSCSNAIYGCKQSTTY 187

Query: 141 LNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSAKSIS-----YNSRFTI 200
            NQ+  HE +C + PCSCP+ DC+Y+   + L +HFR  H+ S   I+         F +
Sbjct: 188 GNQLQSHEKVCVFAPCSCPIKDCNYIGFYKDLINHFRATHKVSPGDINSFVFDRPVIFGL 247

Query: 201 CLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSE-KKFCYDIKAKSQGSV 260
            L+S DK  IF  E  G LFV+     + G   T++ I P   E +KF   +      S 
Sbjct: 248 DLDSSDKMVIFVEEKQGNLFVVQGFIGSHGVYATVSHIAPMVPEVRKFSCSLARLRPYST 306

Query: 261 LSLLSVAKEIQ--RWTEDPPSKGSLLIPN 281
           L L    K IQ  R  E+ P +  LLIP+
Sbjct: 308 LRLGLEVKNIQKLRSQEEQPQEDFLLIPS 306

[Close]

BLAST of CmoCh01G003650 vs. Swiss-Prot
Match: SIL11_ARATH (E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana GN=At5g62800 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-32
Identity = 91/288 (31.60%), Postives = 135/288 (46.88%), Query Frame = 1


Query: 2   AGSRSSDGEKERRSS--ANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWK 61
           + S   +   +R+SS      R +NET    L D  VLDC +C EPL++P +Q       
Sbjct: 4   SNSHPQNQTSKRKSSHPQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQ------- 63

Query: 62  LWIMIKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPS--CSLAIGYMRCRAIE 121
                                  C++GHI C+ C +KV NKCP   C L IG  RC A+E
Sbjct: 64  -----------------------CDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAME 123

Query: 122 KVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRK 181
           +VLES  +PCQN+ +GC  + +  +++ HE  C Y  CSCP  +C+Y  S   +  HF +
Sbjct: 124 RVLESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYNIIYGHFMR 183

Query: 182 RHQDSAKSISYN---SRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGP 241
           RH  ++  +S     S   + +N  +K  +       +LFV+    E  G  VT+ RI P
Sbjct: 184 RHLYNSTIVSSKWGYSTVDVLINIKEKVSVLWESRQKLLFVVQCFKERHGVYVTVRRIAP 243

Query: 242 RSSE-KKFCYDIKAKSQGSVLSLLS-VAKEIQRWTEDPPSKGSLLIPN 281
            +SE KKF Y +     G  ++  S   K +       P    + +PN
Sbjct: 244 PASEFKKFSYRLSYSIDGHNVTYESPEVKRLLEVNSQIPDDSFMFVPN 261

[Close]

BLAST of CmoCh01G003650 vs. TrEMBL
Match: A0A0A0L9Z6_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G185660 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 5.6e-104
Identity = 193/299 (64.55%), Postives = 226/299 (75.59%), Query Frame = 1


Query: 1   MAGSRSSDGEKERRSSANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKL 60
           M  SRSSDG  ERRSS  S R  N T+ VI TDPQ+LDCYICCEPLS+PV+Q        
Sbjct: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQ-------- 60

Query: 61  WIMIKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVL 120
                                 CENGHI+CSSCC+K QNKCPSC+LAIGY+RCRAIEKVL
Sbjct: 61  ----------------------CENGHIACSSCCTKAQNKCPSCTLAIGYIRCRAIEKVL 120

Query: 121 ESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQ 180
           ESIK+PCQN+ YGCKT   LN IN+HE+LC Y+PCSCPL +C++V S E L  HF K+H+
Sbjct: 121 ESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTFVGSTEQLGLHFTKKHK 180

Query: 181 DSAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSEKK 240
           DSAK  SYN+RFTICLN+ D + I +AENDGVLF LSY+FE FG+AVT+NRIGP SSEKK
Sbjct: 181 DSAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFGNAVTMNRIGPLSSEKK 240

Query: 241 FCYDIKAKSQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRIWPS 300
           FCY+IKAK+ GSVLSL S+AKEIQ   + PPSKGSLLIPNE+FGSS+ QT+LEI IWP+
Sbjct: 241 FCYEIKAKTLGSVLSLQSIAKEIQGLIKVPPSKGSLLIPNEYFGSST-QTMLEISIWPA 268

[Close]

BLAST of CmoCh01G003650 vs. TrEMBL
Match: A0A061EGM7_THECC (E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.0e-60
Identity = 124/295 (42.03%), Postives = 177/295 (60.00%), Query Frame = 1


Query: 10  EKERRSSANSSRRKNET-----MKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWIMI 69
           E+E  S A       ET     + + LTDP+VLDC IC E L++PV+Q            
Sbjct: 71  EEEEESGAEQGAMSLETNRDGSISITLTDPEVLDCSICYEALTIPVFQ------------ 130

Query: 70  KIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESIK 129
                             CENGHI+CS CC K++NKCPSC+  IGY RCRAIEKVLES+K
Sbjct: 131 ------------------CENGHIACSICCIKIRNKCPSCATPIGYSRCRAIEKVLESVK 190

Query: 130 MPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSAK 189
           + CQN++YGC+     +   +HE +CPY PCSCPL+DC++  S++ L  HFR +H+ SA 
Sbjct: 191 VSCQNTKYGCREAFRYSIKQKHEKICPYAPCSCPLADCNFEGSSKELYEHFRDKHKYSAT 250

Query: 190 SISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSEKKFCYD 249
              Y+   +I +  D+++CI Q E DG LF+L+   ET G+ VTL+RIGP S E+ F YD
Sbjct: 251 RFQYDRTISITVGIDERFCILQEEQDGSLFILNNKVETLGNVVTLSRIGP-SEERGFFYD 310

Query: 250 IKAK--SQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRIW 298
           + AK  ++ S + L S  K   +  ++PPS G LL+P++ F  +S +  +++R+W
Sbjct: 311 LMAKALTEASTVRLQSFTKSTPKQVDNPPSLGFLLVPSQ-FSCNSRKLKMDLRLW 333

[Close]

BLAST of CmoCh01G003650 vs. TrEMBL
Match: A0A061EG86_THECC (E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.0e-60
Identity = 124/295 (42.03%), Postives = 177/295 (60.00%), Query Frame = 1


Query: 10  EKERRSSANSSRRKNET-----MKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWIMI 69
           E+E  S A       ET     + + LTDP+VLDC IC E L++PV+Q            
Sbjct: 71  EEEEESGAEQGAMSLETNRDGSISITLTDPEVLDCSICYEALTIPVFQ------------ 130

Query: 70  KIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESIK 129
                             CENGHI+CS CC K++NKCPSC+  IGY RCRAIEKVLES+K
Sbjct: 131 ------------------CENGHIACSICCIKIRNKCPSCATPIGYSRCRAIEKVLESVK 190

Query: 130 MPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSAK 189
           + CQN++YGC+     +   +HE +CPY PCSCPL+DC++  S++ L  HFR +H+ SA 
Sbjct: 191 VSCQNTKYGCREAFRYSIKQKHEKICPYAPCSCPLADCNFEGSSKELYEHFRDKHKYSAT 250

Query: 190 SISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSEKKFCYD 249
              Y+   +I +  D+++CI Q E DG LF+L+   ET G+ VTL+RIGP S E+ F YD
Sbjct: 251 RFQYDRTISITVGIDERFCILQEEQDGSLFILNNKVETLGNVVTLSRIGP-SEERGFFYD 310

Query: 250 IKAK--SQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRIW 298
           + AK  ++ S + L S  K   +  ++PPS G LL+P++ F  +S +  +++R+W
Sbjct: 311 LMAKALTEASTVRLQSFTKSTPKQVDNPPSLGFLLVPSQ-FSCNSRKLKMDLRLW 333

[Close]

BLAST of CmoCh01G003650 vs. TrEMBL
Match: W9S0Z7_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027128 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.0e-57
Identity = 128/283 (45.23%), Postives = 166/283 (58.66%), Query Frame = 1


Query: 4   SRSSDGEKERRSSANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWIM 63
           S  ++ E  R  S NS R    ++ V LTDP VLDC IC E L+VPV+Q           
Sbjct: 93  SADANQEDPRPLSTNSDR----SISVFLTDPDVLDCCICFEALTVPVFQ----------- 152

Query: 64  IKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESI 123
                              CENGHI+CSSCC+K+ NKCPSCS  IGY RCRAIEKVLES+
Sbjct: 153 -------------------CENGHIACSSCCTKLGNKCPSCSWPIGYNRCRAIEKVLESV 212

Query: 124 KMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSA 183
           K+ CQN +YGCK   + ++I +HET C + PCSCPL+ C+++ SA+ L  HFR +H DSA
Sbjct: 213 KIACQNKQYGCKEMVSYSEIKDHETTCTHAPCSCPLTSCNFISSAKQLYQHFRSQHADSA 272

Query: 184 KSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSEKKFCY 243
               YN  FT+ LN  DK+ + Q  + G LF+L+   ET G+ V+++ IGP S  K + Y
Sbjct: 273 VLFQYNCDFTVTLNEGDKFLVLQERDGGGLFILNNETETLGNLVSVSCIGPYSFGKSY-Y 332

Query: 244 DIKAKSQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSS 287
           ++ AK  G+ L L S A   Q   +   S   LLIP  FFGSS
Sbjct: 333 NLLAKCDGNTLRLESFATCTQGQADYSLSSVYLLIPPGFFGSS 340

[Close]

BLAST of CmoCh01G003650 vs. TrEMBL
Match: A0A067FAH4_CITSI (E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020280mg PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.9e-57
Identity = 122/279 (43.73%), Postives = 161/279 (57.71%), Query Frame = 1


Query: 8   DGEKERRSSANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWIMIKIE 67
           +GEK     A  SR  N    V +TDP+V DC IC E L+ PV+Q               
Sbjct: 59  NGEKADLDLAGPSR--NGPFSVTVTDPEVFDCPICYESLTAPVFQ--------------- 118

Query: 68  EIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESIKMPC 127
                          CENGHI+CS+CCSK+ NKCPSC   IGY RCRAIEKVLES+K+ C
Sbjct: 119 ---------------CENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTC 178

Query: 128 QNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSAKSIS 187
           +NS YGCK T +  + ++HE +CP+ PCSCP+ DC++V SA +L  HF  +H++SA    
Sbjct: 179 RNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNFVGSANHLYKHFSAKHKNSALHFL 238

Query: 188 YNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSEKKFCYDIKA 247
           YN    + LN  +++ + Q E DGVLF+LS   ET G  ++++ I P S +    Y I A
Sbjct: 239 YNEVVEVTLNVKNRFIVLQEEGDGVLFILSSRSETLGHVISVSCIAP-SCKGCLFYSIFA 298

Query: 248 KSQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSS 287
              GS +   S  K IQ   ++PPS G LL+P E FGSS
Sbjct: 299 GPAGSTVRFQSFTKNIQNRVDNPPSTGFLLVPIESFGSS 304

[Close]

BLAST of CmoCh01G003650 vs. TAIR10
Match: AT5G37930.1 (AT5G37930.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 189.1 bits (479), Expect = 3.9e-48
Identity = 109/306 (35.62%), Postives = 164/306 (53.59%), Query Frame = 1


Query: 3   GSRSSDGEKE-----RR-----SSANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQ 62
           GS S D ++E     RR     +S +SS  K+  + V L DP VLDC ICCEPL +P++Q
Sbjct: 67  GSTSDDSDREVVIEERRFGKFVNSQSSSSSKDSPLSVTLLDPDVLDCPICCEPLKIPIFQ 126

Query: 63  TVDFQWKLWIMIKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMR 122
                                         C+NGH++C+ CC+KV+N+CPSC+L IGY+R
Sbjct: 127 ------------------------------CDNGHLACTLCCTKVRNRCPSCTLPIGYVR 186

Query: 123 CRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLS 182
           CRA+EKV+E+ ++ C N++YGCK +T+      HE +C + PCSCP+ DC Y    + L+
Sbjct: 187 CRAMEKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLN 246

Query: 183 SHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRI 242
           +H R  H+D   S  +N+R TI L+ + K  I Q ENDG + V+          V+++ I
Sbjct: 247 NHVRAEHKDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCI 306

Query: 243 GPRS-SEKKFCYDIKAKSQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTI 298
            P +    +    +   +  S+L    + K IQ+ T + P  G +LIP+  F   S    
Sbjct: 307 APLTPGVGRLSCRLAKITVDSLLKQGFMVKNIQKVTNEHPEDGFMLIPSYLF---SGNDN 339

[Close]

BLAST of CmoCh01G003650 vs. TAIR10
Match: AT5G37890.1 (AT5G37890.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 145.2 bits (365), Expect = 6.5e-35
Identity = 89/298 (29.87%), Postives = 146/298 (48.99%), Query Frame = 1


Query: 3   GSRSSDGEKERRSSANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWI 62
           GS S   +K + SS+++++R  +    +L D ++LDC IC E  ++P++Q          
Sbjct: 15  GSNSILSQKRQLSSSDAAKRDAKKRSTMLMDLEILDCPICYEAFTIPIFQ---------- 74

Query: 63  MIKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLES 122
                               C+NGH++CSSCC K+ NKCP+C+  +G+ RCRA+E VLES
Sbjct: 75  --------------------CDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLES 134

Query: 123 IKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQD- 182
           I +PC N++ GCK   +  +   HE  C +  C+CP  DC+Y  S + L +H+R  H + 
Sbjct: 135 ILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRITHMEI 194

Query: 183 -SAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSE-K 242
               +   +   ++ +N   K  I        LF +    E +G  VT++ I P S E  
Sbjct: 195 NQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAPSSPELS 254

Query: 243 KFCYDIKAKSQG-SVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRI 297
           ++ Y +     G +V+      K + + +   P +  +LIPN          +LE+RI
Sbjct: 255 QYSYALSYTVDGHTVIYQSPEVKRVLKLSFQTPQENFMLIPNSLLRGD----VLEMRI 278

[Close]

BLAST of CmoCh01G003650 vs. TAIR10
Match: AT5G37870.1 (AT5G37870.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 144.8 bits (364), Expect = 8.5e-35
Identity = 88/282 (31.21%), Postives = 146/282 (51.77%), Query Frame = 1


Query: 8   DGEKERRSSANSS----RRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWIM 67
           +G ++R  S+ SS    +R ++T   +LTD  +LDC IC + L +PV+Q           
Sbjct: 10  NGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQ----------- 69

Query: 68  IKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESI 127
                              C NGH++CSSCC K++NKCP+C+L +G++RCRA+E+VLES+
Sbjct: 70  -------------------CGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESV 129

Query: 128 KMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSA 187
            +PC+ +  GC  T    + + HE +C + PCSCP+  C+Y  S + L  H+   H   +
Sbjct: 130 LVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGS 189

Query: 188 KSISYN--SRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSE-KK 247
            + S+N  S     +   DK  I +     +LFV+    E  G  V+++ I P + E  +
Sbjct: 190 TAYSFNGVSYIAAMMFISDKILIERVYEKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGE 249

Query: 248 FCYDIKAKS-QGSVLSLLS-VAKEIQRWTEDPPSKGSLLIPN 281
           F Y +   + +G  ++  S   K++ + +   P    +LIP+
Sbjct: 250 FSYGLLYTTWEGVTMTYQSPKVKKVLKVSSQRPKDSFMLIPH 261

[Close]

BLAST of CmoCh01G003650 vs. TAIR10
Match: AT1G66650.1 (AT1G66650.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34
Identity = 92/269 (34.20%), Postives = 132/269 (49.07%), Query Frame = 1


Query: 21  RRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWIMIKIEEIWRSFEQLLAKI 80
           RR +    V L +  VL+C  C +PL  P++Q                            
Sbjct: 68  RRVSSPKSVTLPNSNVLECPNCFDPLKKPIFQ---------------------------- 127

Query: 81  VECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESIKMPCQNSRYGCK-TTTN 140
             C NGH++C  CC K++ +C  C L IG +RCRA+EKV+++  + C N+ YGCK +TT 
Sbjct: 128 --CNNGHLACFLCCIKLKKRCSFCKLPIGDVRCRAMEKVIKAGLVSCSNAIYGCKQSTTY 187

Query: 141 LNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSAKSIS-----YNSRFTI 200
            NQ+  HE +C + PCSCP+ DC+Y+   + L +HFR  H+ S   I+         F +
Sbjct: 188 GNQLQSHEKVCVFAPCSCPIKDCNYIGFYKDLINHFRATHKVSPGDINSFVFDRPVIFGL 247

Query: 201 CLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSE-KKFCYDIKAKSQGSV 260
            L+S DK  IF  E  G LFV+     + G   T++ I P   E +KF   +      S 
Sbjct: 248 DLDSSDKMVIFVEEKQGNLFVVQGFIGSHGVYATVSHIAPMVPEVRKFSCSLARLRPYST 306

Query: 261 LSLLSVAKEIQ--RWTEDPPSKGSLLIPN 281
           L L    K IQ  R  E+ P +  LLIP+
Sbjct: 308 LRLGLEVKNIQKLRSQEEQPQEDFLLIPS 306

[Close]

BLAST of CmoCh01G003650 vs. TAIR10
Match: AT5G62800.1 (AT5G62800.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 141.7 bits (356), Expect = 7.2e-34
Identity = 91/288 (31.60%), Postives = 135/288 (46.88%), Query Frame = 1


Query: 2   AGSRSSDGEKERRSS--ANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWK 61
           + S   +   +R+SS      R +NET    L D  VLDC +C EPL++P +Q       
Sbjct: 4   SNSHPQNQTSKRKSSHPQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQ------- 63

Query: 62  LWIMIKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPS--CSLAIGYMRCRAIE 121
                                  C++GHI C+ C +KV NKCP   C L IG  RC A+E
Sbjct: 64  -----------------------CDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAME 123

Query: 122 KVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRK 181
           +VLES  +PCQN+ +GC  + +  +++ HE  C Y  CSCP  +C+Y  S   +  HF +
Sbjct: 124 RVLESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYNIIYGHFMR 183

Query: 182 RHQDSAKSISYN---SRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGP 241
           RH  ++  +S     S   + +N  +K  +       +LFV+    E  G  VT+ RI P
Sbjct: 184 RHLYNSTIVSSKWGYSTVDVLINIKEKVSVLWESRQKLLFVVQCFKERHGVYVTVRRIAP 243

Query: 242 RSSE-KKFCYDIKAKSQGSVLSLLS-VAKEIQRWTEDPPSKGSLLIPN 281
            +SE KKF Y +     G  ++  S   K +       P    + +PN
Sbjct: 244 PASEFKKFSYRLSYSIDGHNVTYESPEVKRLLEVNSQIPDDSFMFVPN 261

[Close]

BLAST of CmoCh01G003650 vs. NCBI nr
Match: gi|778679778|ref|XP_004140738.2| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 8.1e-104
Identity = 193/299 (64.55%), Postives = 226/299 (75.59%), Query Frame = 1


Query: 1   MAGSRSSDGEKERRSSANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKL 60
           M  SRSSDG  ERRSS  S R  N T+ VI TDPQ+LDCYICCEPLS+PV+Q        
Sbjct: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQ-------- 60

Query: 61  WIMIKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVL 120
                                 CENGHI+CSSCC+K QNKCPSC+LAIGY+RCRAIEKVL
Sbjct: 61  ----------------------CENGHIACSSCCTKAQNKCPSCTLAIGYIRCRAIEKVL 120

Query: 121 ESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQ 180
           ESIK+PCQN+ YGCKT   LN IN+HE+LC Y+PCSCPL +C++V S E L  HF K+H+
Sbjct: 121 ESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTFVGSTEQLGLHFTKKHK 180

Query: 181 DSAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSEKK 240
           DSAK  SYN+RFTICLN+ D + I +AENDGVLF LSY+FE FG+AVT+NRIGP SSEKK
Sbjct: 181 DSAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFGNAVTMNRIGPLSSEKK 240

Query: 241 FCYDIKAKSQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRIWPS 300
           FCY+IKAK+ GSVLSL S+AKEIQ   + PPSKGSLLIPNE+FGSS+ QT+LEI IWP+
Sbjct: 241 FCYEIKAKTLGSVLSLQSIAKEIQGLIKVPPSKGSLLIPNEYFGSST-QTMLEISIWPA 268

[Close]

BLAST of CmoCh01G003650 vs. NCBI nr
Match: gi|659114528|ref|XP_008457096.1| (PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 6.7e-74
Identity = 145/245 (59.18%), Postives = 173/245 (70.61%), Query Frame = 1


Query: 1   MAGSRSSDGEKERRSSANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKL 60
           MA S+SSDG  ERRSS  S R  N TM VI TDPQ+LDCYIC   LS+P++Q        
Sbjct: 1   MADSQSSDGGSERRSSVISRRGTNGTMNVIFTDPQILDCYICWNXLSIPIFQ-------- 60

Query: 61  WIMIKIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVL 120
                                 CEN HI+CSSCC+KVQNKCPSC LAIGY+RCRAIEKVL
Sbjct: 61  ----------------------CENXHIACSSCCTKVQNKCPSCILAIGYIRCRAIEKVL 120

Query: 121 ESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQ 180
           ESIK+PC+N+ Y CKT  +LN IN+ ETLC Y+PCSCPL +C++V  AE L  HF +RH+
Sbjct: 121 ESIKLPCKNAIYRCKTAMDLNLINDQETLCRYEPCSCPLDNCTFVGLAEQLYLHFSRRHK 180

Query: 181 DSAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSEKK 240
           +SAK  SYN+RFTICLN+ D Y I +AE+DGVLF LSY+FE FG+A+T+N IGP SSEKK
Sbjct: 181 NSAKHFSYNTRFTICLNNGDTYRILKAEDDGVLFFLSYTFEIFGNAITVNWIGPLSSEKK 215

Query: 241 FCYDI 246
           F Y I
Sbjct: 241 FSYKI 215

[Close]

BLAST of CmoCh01G003650 vs. NCBI nr
Match: gi|590652270|ref|XP_007033104.1| (RING/U-box and TRAF-like domains, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60
Identity = 124/295 (42.03%), Postives = 177/295 (60.00%), Query Frame = 1


Query: 10  EKERRSSANSSRRKNET-----MKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWIMI 69
           E+E  S A       ET     + + LTDP+VLDC IC E L++PV+Q            
Sbjct: 71  EEEEESGAEQGAMSLETNRDGSISITLTDPEVLDCSICYEALTIPVFQ------------ 130

Query: 70  KIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESIK 129
                             CENGHI+CS CC K++NKCPSC+  IGY RCRAIEKVLES+K
Sbjct: 131 ------------------CENGHIACSICCIKIRNKCPSCATPIGYSRCRAIEKVLESVK 190

Query: 130 MPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSAK 189
           + CQN++YGC+     +   +HE +CPY PCSCPL+DC++  S++ L  HFR +H+ SA 
Sbjct: 191 VSCQNTKYGCREAFRYSIKQKHEKICPYAPCSCPLADCNFEGSSKELYEHFRDKHKYSAT 250

Query: 190 SISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSEKKFCYD 249
              Y+   +I +  D+++CI Q E DG LF+L+   ET G+ VTL+RIGP S E+ F YD
Sbjct: 251 RFQYDRTISITVGIDERFCILQEEQDGSLFILNNKVETLGNVVTLSRIGP-SEERGFFYD 310

Query: 250 IKAK--SQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRIW 298
           + AK  ++ S + L S  K   +  ++PPS G LL+P++ F  +S +  +++R+W
Sbjct: 311 LMAKALTEASTVRLQSFTKSTPKQVDNPPSLGFLLVPSQ-FSCNSRKLKMDLRLW 333

[Close]

BLAST of CmoCh01G003650 vs. NCBI nr
Match: gi|590652274|ref|XP_007033105.1| (Ubiquitin-protein ligase, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60
Identity = 124/295 (42.03%), Postives = 177/295 (60.00%), Query Frame = 1


Query: 10  EKERRSSANSSRRKNET-----MKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWIMI 69
           E+E  S A       ET     + + LTDP+VLDC IC E L++PV+Q            
Sbjct: 71  EEEEESGAEQGAMSLETNRDGSISITLTDPEVLDCSICYEALTIPVFQ------------ 130

Query: 70  KIEEIWRSFEQLLAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESIK 129
                             CENGHI+CS CC K++NKCPSC+  IGY RCRAIEKVLES+K
Sbjct: 131 ------------------CENGHIACSICCIKIRNKCPSCATPIGYSRCRAIEKVLESVK 190

Query: 130 MPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSAK 189
           + CQN++YGC+     +   +HE +CPY PCSCPL+DC++  S++ L  HFR +H+ SA 
Sbjct: 191 VSCQNTKYGCREAFRYSIKQKHEKICPYAPCSCPLADCNFEGSSKELYEHFRDKHKYSAT 250

Query: 190 SISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSEKKFCYD 249
              Y+   +I +  D+++CI Q E DG LF+L+   ET G+ VTL+RIGP S E+ F YD
Sbjct: 251 RFQYDRTISITVGIDERFCILQEEQDGSLFILNNKVETLGNVVTLSRIGP-SEERGFFYD 310

Query: 250 IKAK--SQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRIW 298
           + AK  ++ S + L S  K   +  ++PPS G LL+P++ F  +S +  +++R+W
Sbjct: 311 LMAKALTEASTVRLQSFTKSTPKQVDNPPSLGFLLVPSQ-FSCNSRKLKMDLRLW 333

[Close]

BLAST of CmoCh01G003650 vs. NCBI nr
Match: gi|470135025|ref|XP_004303331.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 236.1 bits (601), Expect = 7.9e-59
Identity = 126/281 (44.84%), Postives = 162/281 (57.65%), Query Frame = 1


Query: 17  ANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQTVDFQWKLWIMIKIEEIWRSFEQL 76
           A+++   + ++ + L DP VLDC ICCE L+VPV+Q                        
Sbjct: 99  ASTTTATDRSISITLADPDVLDCPICCESLTVPVFQ------------------------ 158

Query: 77  LAKIVECENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESIKMPCQNSRYGCKT 136
                 CENGHI+CSSC +KV+NKCPSCS  IGY RCRAIEKVLESI++ CQN +YGCK 
Sbjct: 159 ------CENGHIACSSCSTKVKNKCPSCSWPIGYNRCRAIEKVLESIRISCQNIKYGCKE 218

Query: 137 TTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSAKSISYNSRFTICL 196
               +  NEHE  C + PCSCP S C++V S + L  HF   H +SA    YN  F+I +
Sbjct: 219 WMTCDNKNEHEKGCMHSPCSCPHSGCNFVSSTKQLYQHFSSNHLNSATRFLYNCSFSITI 278

Query: 197 NSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRSSEKKFCYDIKAKSQGSVLSL 256
           N +DK+ + Q ENDG+LF+L    E  G+ V L+ I PR     F YD+ AK +G +L L
Sbjct: 279 NFNDKFVVLQEENDGMLFILDNESEIIGNMVRLSSIQPRFM-GGFFYDLTAKRKGCLLRL 338

Query: 257 LSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRIW 298
            S     Q     P S GSL+IP +FF SS  Q  L+I IW
Sbjct: 339 QSFTTSTQSHVRSPTSSGSLIIPGDFF-SSCGQLKLDICIW 347

The following BLAST results are available for this feature:

BLAST of CmoCh01G003650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SIL10_ARATH	6.9e-47	35.62	E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE...	[more]
SINL7_ARATH	1.1e-33	29.87	E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=...	[more]
SINL6_ARATH	1.5e-33	31.21	Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g...	[more]
SINL4_ARATH	3.3e-33	34.20	E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana GN=At1g66650 PE=...	[more]
SIL11_ARATH	1.3e-32	31.60	E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana GN=At5g62800 PE...	[more]

BLAST of CmoCh01G003650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9Z6_CUCSA	5.6e-104	64.55	E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G185660 PE=3 SV=1	[more]
A0A061EGM7_THECC	1.0e-60	42.03	E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1	[more]
A0A061EG86_THECC	1.0e-60	42.03	E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1	[more]
W9S0Z7_9ROSA	1.0e-57	45.23	E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027128 PE=3 SV=1	[more]
A0A067FAH4_CITSI	3.9e-57	43.73	E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020280mg PE=3 SV=1	[more]

BLAST of CmoCh01G003650 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37930.1	3.9e-48	35.62	Protein with RING/U-box and TRAF-like domains	[more]
AT5G37890.1	6.5e-35	29.87	Protein with RING/U-box and TRAF-like domains	[more]
AT5G37870.1	8.5e-35	31.21	Protein with RING/U-box and TRAF-like domains	[more]
AT1G66650.1	1.9e-34	34.20	Protein with RING/U-box and TRAF-like domains	[more]
AT5G62800.1	7.2e-34	31.60	Protein with RING/U-box and TRAF-like domains	[more]

BLAST of CmoCh01G003650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778679778\|ref\|XP_004140738.2\|	8.1e-104	64.55	PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus]	[more]
gi\|659114528\|ref\|XP_008457096.1\|	6.7e-74	59.18	PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINA-like 10 [Cucumi...	[more]
gi\|590652270\|ref\|XP_007033104.1\|	1.4e-60	42.03	RING/U-box and TRAF-like domains, putative isoform 1 [Theobroma cacao]	[more]
gi\|590652274\|ref\|XP_007033105.1\|	1.4e-60	42.03	Ubiquitin-protein ligase, putative isoform 2 [Theobroma cacao]	[more]
gi\|470135025\|ref\|XP_004303331.1\|	7.9e-59	44.84	PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X3 [Fragaria vesca s...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004162	SINA-like
IPR008974	TRAF-like
IPR013010	Znf_SIAH
IPR013083	Znf_RING/FYVE/PHD
IPR013323	SIAH-type domain
IPR018121	7-in-absentia-prot_TRAF-dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006511	ubiquitin-dependent protein catabolic process
GO:0007275	multicellular organism development
GO:0016567	protein ubiquitination

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0004842	ubiquitin-protein transferase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G003650.1	CmoCh01G003650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004162	E3 ubiquitin-protein ligase SIN-like	PANTHER	PTHR10315	SEVEN IN ABSENTIA HOMOLOG	coord: 10..53 score: 9.3E-81coord: 84..297 score: 9.3
IPR008974	TRAF-like	unknown	SSF49599	TRAF domain-like	coord: 122..297 score: 4.05
IPR013010	Zinc finger, SIAH-type	PROFILE	PS51081	ZF_SIAH	coord: 122..180 score: 13
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 28..48 score: 8.5E-7coord: 80..134 score: 8.
IPR013323	SIAH-type domain	GENE3D	G3DSA:3.90.890.10		coord: 135..175 score: 8.2
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 111..268 score: 3.2
None	No IPR available	PANTHER	PTHR10315:SF43	E3 UBIQUITIN-PROTEIN LIGASE	coord: 10..53 score: 9.3E-81coord: 84..297 score: 9.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G003650	Cla013158	Watermelon (97103) v1	cmowmB427
CmoCh01G003650	ClCG05G010810	Watermelon (Charleston Gray)	cmowcgB406

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G003650	Cucumber (Chinese Long) v3	cmocucB0532
CmoCh01G003650	Cucumber (Chinese Long) v3	cmocucB0535
CmoCh01G003650	Watermelon (97103) v2	cmowmbB454
CmoCh01G003650	Wax gourd	cmowgoB0556
CmoCh01G003650	Cucurbita moschata (Rifu)	cmocmoB203
CmoCh01G003650	Cucumber (Gy14) v1	cgycmoB0249
CmoCh01G003650	Cucumber (Gy14) v1	cgycmoB0552
CmoCh01G003650	Cucurbita maxima (Rimu)	cmacmoB257
CmoCh01G003650	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G003650	Wild cucumber (PI 183967)	cmocpiB449
CmoCh01G003650	Cucumber (Chinese Long) v2	cmocuB445
CmoCh01G003650	Melon (DHL92) v3.5.1	cmomeB421
CmoCh01G003650	Cucurbita pepo (Zucchini)	cmocpeB449
CmoCh01G003650	Cucurbita pepo (Zucchini)	cmocpeB453
CmoCh01G003650	Bottle gourd (USVL1VR-Ls)	cmolsiB430
CmoCh01G003650	Cucumber (Gy14) v2	cgybcmoB339
CmoCh01G003650	Cucumber (Gy14) v2	cgybcmoB342
CmoCh01G003650	Melon (DHL92) v3.6.1	cmomedB483
CmoCh01G003650	Silver-seed gourd	carcmoB0249
CmoCh01G003650	Silver-seed gourd	carcmoB1033