CmoCh01G001810 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGGAAAGCCGAAGTTTTGTTCTTGCTCTTATATTTCCTCTATTCTCCGATTTGGTGCGATAAAAATCAATCTTCTTCTTTGCTTTCTCATAGTATCTCCTCCATTGCAATCGAATTGCGGAAGAAGAAGATGCGGCGTACTACAAGGAAAACCGGTCAACCAAATTCAACTTCCGTTAATTCTTCCGCCGTGGATCTCTTTCGTTCCGGTATTTGATTTTTTGTTTTCTTTTCCAGAATTCGAATTCTTCTACCTGTGATTATCGCCATGGAAATCGATCGTCGTGTTGTGTATATGTTGTGGTTAATCGCGTGCTACAAGCATGATTAATTACTTTCTTGATGGTTCTTTTTAAGGAGATTTGTGTCTTTTTGATACTGCGTGTAGAACTATATTAAGATTTTAGTTAGTCTTGAAATAGAGTGAAGGTTCAGTGGGACATGATTTATGATCGTCGTGTTGTGTTTATGTTGTGTATAGAAGTCCCTCCTTTCATTCTTGCTGGTATAAACTACATGATTTATGATCGTTTGTTATTCACAACAATCTTTTAATTCAACTCTCATGAACTTAAGATTCTCAATTTATTCAGCCTCAAGTAAAGCAAGCACAAAAGAGTTGGAACGGATCAATAGCCTATTTTACTCATATGCCAATGCCTCTTCTGGTTTGATCGAGTAAGTCAAATTTTGGCCCATGGAAATATCTCAATTTTCAGCATTGGTAGTTAGGTTTGCGTGGTACAAATATATATTTTTATTCAGTATTATACTGTTTAAATTCCCAGCAATATTCAAATAATGAAAATTTTTCCTTTTGTGGTTGATATCTCACGCTTACTCTTGTATAATAATACTATCCTTCTACATCAAAACTTCCCATCCATGTTCTTGTAATGATCAAGAAGGTTGTTTTCCTTATCTTTAAGGAGACTTCTGAATACATGTATAGATAAGATCCATTTGGTATGTAGTACTGACTATTTCTTTAACAGTCCAGAAGGAATTGAAACTCTTTGTTCAGACATGGAAGTGGATCACACTGATGTAAGGATCTTGATGCTTGCTTGGTAAGTTGTAGTTAGATTGATACGATAACTCAATATTTTTGTGTCTATGATCCCATTGCCTAGAAACTAATGGATTGCACATACCAGGAAAATGAAAGCTGAAAAACAGGGATACTTTAACCTGGTAAGAATGTTTACTCTCTTGTGGGCCTCCGAATATTATATAAGTTATACAGCAGATCTTCTTTCTCGTATAGTTCCCTTTATTTTCTGCAAAATGCATCCACATCATTGAATCCTTTCTATTCATTTTCTAATTAGTATGGTAATCTGTAAAGTGTATATTTTGTGTGTTGGGCACCAGCTTGTAAGGAAAATTCTTTAGTTTATGACCTAACTTGAACATACACTTCAGTTCTATGGAAAATTTTGTCATTTATATTCACAGCTTCAAATTATTTGGAAAGTTTTGTTTATTGTTTATATATCTTATTTTCCTCTTGTGTTTACTGTTCTCTTCCTTTTCTTTCATCATGCCCATGTTCCATCTTATTATATATTCTAATTTCAGTTTGAGACATGATGAAGCATTTAGTCCCTCGTGCCCCCTCCTTAGTAAAGTCATTTTATGGAACCTTAACCTATTGCTTATTCTATAGGAGGAATGGCGTAGAGGCCTCAAATCCCTGAAGGCTGACACTGTTAGTAAACTAAAGAAGGCACTACCAGATCTCGAGAAAGAGGTACATTCTTGTCTTTTTAAAAGTTCAAAAATAAACAAGTACATATAGTTGGTGGATTGCTGAATTTTTGCACATAAAGTTCTTAATTATCAATACCTCACATTTTGAGAAGGTAAGGAGGCCATCAAATTTTGTGGACTTCTATTCATATGCATTTCGGTATTGTTTAACAGGTAAACAGATTATTTTAGTGTATTTTTTATTTTGAAGATCGGTTCATTTTCTTCTACTCTATATAATTTGATATTTACGTTTTCTTTAATCCATGTAACTTTTTTTTTTTTCTTAGAGGAGAAGCAAAAGAGTATTGACATAGAGAGTATATGCGAGCTGCTGAATCTTGTTTTAGGGTCTCAGTTTCATGCTCAAGTCAATTCATTTGTTGAATACTTGAAGGTGAGTGCTGCACTACGTTTGTGTCATCTAAATTGCCACATTTATCCATGGGCATGGTTCATTTGCCACTGCAATCGACTCCACCTCTGCCTCAAAGTACTTCTACATATTTAATAGTAGCACTTAGTCTGAGAGAGTTACATTCTTGAGTTTTGGCCTCTCTTTAGCATACATAGTGGAGCACACTGCCCCGTGTCGATAAAATTGACTTTACCATATTTCTTCTGTTAGCTTAAGCCATAGCTTTCTAGGCAATTCGTTTTATGTTAATCTGCTTCTCACAAGAACTTAAGCACATGGGTAACCTTGAAAGATATAGTGTAGAGTAACAAAATTTTCTTGCTTTGATTATTATTATTTTTTTTTGGGTTATTGGTTGTTTAATACCCTGTTTGTTGTCTTCCCCCTCATCTAGGCAGAATAAAATTTATTTCTTATTTGCTCGTATTATGTATGCAGATACAAAGTGACTATAAGGTTATTAATATGGATCAATGGATGGGATTCTTTCGGTTCTGCAATGAGGTATTTTGTCTCTCCCTTTCCCCTCAAAGCACATTAACACAATTCATTATATTTGCTTTCCATCTTCCCCACCCAGTAATCACCATGGACCATGGGCTCAATAAGAGCCATGAAAACAATAAAGAGTTTAGAGGGAATAGTTTTAAGACATGATGACCACCTGCCTATGAGTTTTCTTGACAACCAAATGTAGTAGGGTTAGGTAGTTATTTTGTGATAATAATCGCAGTGCACCTACTAGAAACATGCTCTGAATATAAGAAGAGAGTCATTGTCAATCCAATGATCCTATCCCTTTTATTCAATGAGATTGGTATTTAAATTTATATATCTATATATACACTATATATATCTAAATGTACAAGCTTAACTGAGGTAGGAGAAAAGCCAGTGAAGTACAACACAAATAATATATTTACAAAACTATAATTATACTAATCTAAGAACTATAATATTTATATTTTGCTTGCCTTATGAACCTAAAAATACAGAAAACTATTAAATTGCTAATTGGGCAATCTAGGAGGGGATCAACTCATCCTATTCGATTAGGGCCACGTGATAATAAACATAGAAGGAATGTGTTCAAATCATGGTGGCCACCTACTTGGAATTTAATGTTACTATGAATTATCTTAGCAATCAATATGTAGTTGGCAGTTATCTCGTGAGAATAACTTTATCTATCCACCCCCATTTGATTTGTTCGTTATTGATATCCTCAATTCAAGTTGTGACCCATGAATCATGATGATCATTGTGCAGATAAATTTTCCGGACCTGAGCAATTACGATTCGGAACTTGCTTGGCCGTTGATCCTCGACAATTTTGTTGAATGGTTACAAGCAAAACAAAGTTAAAAAACCGAATGTCTTCATCATACATTGTATACTCCCACAGTCGTTGAAGGCAAGTATCCTATTCTCTTACGCACTTCATACTCAATGTACGTTGTTGTTTCGAGCTGACCACATTTATTGAACTTGTTCTTTCTGCAGGCTCGCTTGGTTGGATTACACATTGCATAGCAGCAGAATTTTCACTTATTATTCTTTCTTTCACTGTTCTAACTTCTTTGAAATCGAGGATGATTCCCATTCTTATGCTAAAGTTATAATTTCAAACATTCATGGATGATTCTGCTAAAGTTTCCTCCCAAGTCCCCCACCCTGTTTTTTTTTTGGTATCCATTCTTCATCTTAGCCCTCCAATTGACTTGACTATTTTACTTTTACTTGTAAGAACAGCTCAAGCTGAAAATTTTCTAACAGGATAAGTGTTGGAATATTTTTATTGCCTTTTTGAACACTTATTTGG AAGGAAAGCCGAAGTTTTGTTCTTGCTCTTATATTTCCTCTATTCTCCGATTTGGTGCGATAAAAATCAATCTTCTTCTTTGCTTTCTCATAGTATCTCCTCCATTGCAATCGAATTGCGGAAGAAGAAGATGCGGCGTACTACAAGGAAAACCGGTCAACCAAATTCAACTTCCGTTAATTCTTCCGCCGTGGATCTCTTTCGTTCCGCCTCAAGTAAAGCAAGCACAAAAGAGTTGGAACGGATCAATAGCCTATTTTACTCATATGCCAATGCCTCTTCTGGTTTGATCGATCCAGAAGGAATTGAAACTCTTTGTTCAGACATGGAAGTGGATCACACTGATGTAAGGATCTTGATGCTTGCTTGGAAAATGAAAGCTGAAAAACAGGGATACTTTAACCTGGAGGAATGGCGTAGAGGCCTCAAATCCCTGAAGGCTGACACTGTTAGTAAACTAAAGAAGGCACTACCAGATCTCGAGAAAGAGGTAAGGAGGCCATCAAATTTTGTGGACTTCTATTCATATGCATTTCGGTATTGTTTAACAGAGGAGAAGCAAAAGAGTATTGACATAGAGAGTATATGCGAGCTGCTGAATCTTGTTTTAGGGTCTCAGTTTCATGCTCAAGTCAATTCATTTGTTGAATACTTGAAGATACAAAGTGACTATAAGGTTATTAATATGGATCAATGGATGGGATTCTTTCGGTTCTGCAATGAGATAAATTTTCCGGACCTGAGCAATTACGATTCGGAACTTGCTTGGCCGTTGATCCTCGACAATTTTGTTGAATGGTTACAAGCAAAACAAAGTTAAAAAACCGAATGTCTTCATCATACATTGTATACTCCCACAGTCGTTGAAGGCTCGCTTGGTTGGATTACACATTGCATAGCAGCAGAATTTTCACTTATTATTCTTTCTTTCACTGTTCTAACTTCTTTGAAATCGAGGATGATTCCCATTCTTATGCTAAAGTTATAATTTCAAACATTCATGGATGATTCTGCTAAAGTTTCCTCCCAAGTCCCCCACCCTGTTTTTTTTTTGGTATCCATTCTTCATCTTAGCCCTCCAATTGACTTGACTATTTTACTTTTACTTGTAAGAACAGCTCAAGCTGAAAATTTTCTAACAGGATAAGTGTTGGAATATTTTTATTGCCTTTTTGAACACTTATTTGG ATGCGGCGTACTACAAGGAAAACCGGTCAACCAAATTCAACTTCCGTTAATTCTTCCGCCGTGGATCTCTTTCGTTCCGCCTCAAGTAAAGCAAGCACAAAAGAGTTGGAACGGATCAATAGCCTATTTTACTCATATGCCAATGCCTCTTCTGGTTTGATCGATCCAGAAGGAATTGAAACTCTTTGTTCAGACATGGAAGTGGATCACACTGATGTAAGGATCTTGATGCTTGCTTGGAAAATGAAAGCTGAAAAACAGGGATACTTTAACCTGGAGGAATGGCGTAGAGGCCTCAAATCCCTGAAGGCTGACACTGTTAGTAAACTAAAGAAGGCACTACCAGATCTCGAGAAAGAGGTAAGGAGGCCATCAAATTTTGTGGACTTCTATTCATATGCATTTCGGTATTGTTTAACAGAGGAGAAGCAAAAGAGTATTGACATAGAGAGTATATGCGAGCTGCTGAATCTTGTTTTAGGGTCTCAGTTTCATGCTCAAGTCAATTCATTTGTTGAATACTTGAAGATACAAAGTGACTATAAGGTTATTAATATGGATCAATGGATGGGATTCTTTCGGTTCTGCAATGAGATAAATTTTCCGGACCTGAGCAATTACGATTCGGAACTTGCTTGGCCGTTGATCCTCGACAATTTTGTTGAATGGTTACAAGCAAAACAAAGTTAA
BLAST of CmoCh01G001810 vs. Swiss-Prot
Match: DCNL4_HUMAN (DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2) HSP 1 Score: 144.1 bits (362), Expect = 2.0e-33 Identity = 90/232 (38.79%), Postives = 127/232 (54.74%), Query Frame = 1
BLAST of CmoCh01G001810 vs. Swiss-Prot
Match: DCNL5_HUMAN (DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 4.4e-33 Identity = 72/187 (38.50%), Postives = 115/187 (61.50%), Query Frame = 1
BLAST of CmoCh01G001810 vs. Swiss-Prot
Match: DCNL5_RAT (DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.7e-33 Identity = 72/187 (38.50%), Postives = 115/187 (61.50%), Query Frame = 1
BLAST of CmoCh01G001810 vs. Swiss-Prot
Match: DCNL5_MOUSE (DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.7e-33 Identity = 72/187 (38.50%), Postives = 115/187 (61.50%), Query Frame = 1
BLAST of CmoCh01G001810 vs. Swiss-Prot
Match: DCNL5_BOVIN (DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.7e-33 Identity = 72/187 (38.50%), Postives = 115/187 (61.50%), Query Frame = 1
BLAST of CmoCh01G001810 vs. TrEMBL
Match: A0A0A0KYL5_CUCSA (Defective in cullin neddylation protein OS=Cucumis sativus GN=Csa_4G006480 PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 8.3e-116 Identity = 207/228 (90.79%), Postives = 222/228 (97.37%), Query Frame = 1
BLAST of CmoCh01G001810 vs. TrEMBL
Match: D7TZF8_VITVI (Defective in cullin neddylation protein OS=Vitis vinifera GN=VIT_09s0002g08930 PE=4 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 8.4e-108 Identity = 198/229 (86.46%), Postives = 212/229 (92.58%), Query Frame = 1
BLAST of CmoCh01G001810 vs. TrEMBL
Match: B9SMU9_RICCO (Defective in cullin neddylation protein OS=Ricinus communis GN=RCOM_0471020 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 3.2e-107 Identity = 192/229 (83.84%), Postives = 215/229 (93.89%), Query Frame = 1
BLAST of CmoCh01G001810 vs. TrEMBL
Match: A0A067L0J9_JATCU (Defective in cullin neddylation protein OS=Jatropha curcas GN=JCGZ_27014 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 3.2e-107 Identity = 192/229 (83.84%), Postives = 215/229 (93.89%), Query Frame = 1
BLAST of CmoCh01G001810 vs. TrEMBL
Match: B9GVI7_POPTR (Defective in cullin neddylation protein OS=Populus trichocarpa GN=POPTR_0003s17870g PE=4 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 1.2e-106 Identity = 190/230 (82.61%), Postives = 216/230 (93.91%), Query Frame = 1
BLAST of CmoCh01G001810 vs. TAIR10
Match: AT1G15860.3 (AT1G15860.3 Domain of unknown function (DUF298)) HSP 1 Score: 342.4 bits (877), Expect = 2.1e-94 Identity = 170/238 (71.43%), Postives = 197/238 (82.77%), Query Frame = 1
BLAST of CmoCh01G001810 vs. TAIR10
Match: AT3G12760.1 (AT3G12760.1 Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060)) HSP 1 Score: 118.6 bits (296), Expect = 5.0e-27 Identity = 67/210 (31.90%), Postives = 120/210 (57.14%), Query Frame = 1
BLAST of CmoCh01G001810 vs. TAIR10
Match: AT3G28970.1 (AT3G28970.1 Domain of unknown function (DUF298)) HSP 1 Score: 51.2 bits (121), Expect = 9.7e-07 Identity = 31/98 (31.63%), Postives = 50/98 (51.02%), Query Frame = 1
BLAST of CmoCh01G001810 vs. NCBI nr
Match: gi|659108387|ref|XP_008454171.1| (PREDICTED: DCN1-like protein 4 [Cucumis melo]) HSP 1 Score: 428.3 bits (1100), Expect = 8.3e-117 Identity = 209/228 (91.67%), Postives = 223/228 (97.81%), Query Frame = 1
BLAST of CmoCh01G001810 vs. NCBI nr
Match: gi|449468930|ref|XP_004152174.1| (PREDICTED: DCN1-like protein 5 [Cucumis sativus]) HSP 1 Score: 424.5 bits (1090), Expect = 1.2e-115 Identity = 207/228 (90.79%), Postives = 222/228 (97.37%), Query Frame = 1
BLAST of CmoCh01G001810 vs. NCBI nr
Match: gi|700197783|gb|KGN52941.1| (hypothetical protein Csa_4G006480 [Cucumis sativus]) HSP 1 Score: 424.5 bits (1090), Expect = 1.2e-115 Identity = 207/228 (90.79%), Postives = 222/228 (97.37%), Query Frame = 1
BLAST of CmoCh01G001810 vs. NCBI nr
Match: gi|225443086|ref|XP_002273365.1| (PREDICTED: DCN1-like protein 4 isoform X1 [Vitis vinifera]) HSP 1 Score: 397.9 bits (1021), Expect = 1.2e-107 Identity = 198/229 (86.46%), Postives = 212/229 (92.58%), Query Frame = 1
BLAST of CmoCh01G001810 vs. NCBI nr
Match: gi|802565798|ref|XP_012067535.1| (PREDICTED: DCN1-like protein 4 [Jatropha curcas]) HSP 1 Score: 396.0 bits (1016), Expect = 4.6e-107 Identity = 192/229 (83.84%), Postives = 215/229 (93.89%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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