CmaCh01G001730 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGGAAAGCTGAAGTTTTGTTCTTGCTTTTATATTTCCTCTATTCTCCGATTTGGTGCGATAAAAATCAATTTCTTCTTTGCTTTCTCTTAGTATCTCCTCCATTGCAATCGAATTGCGGAAGAAGAAGATGCGGCGTACTACAAGGAAGACCGGTCAACCAAATTCAACTTCCGTTAATTCTTCCGCCGTGGATCTCTTTCGTTCCGGTATTTGATTTTTTCTTTTCTTTTCCAGAATTCGAATTCTTCTACCTGTGATTATCGCCATGGAAATCGATGGTCGTGTTGTGGTTAATCGCGTGCTACGAGCATGATTAATTACTGTCTTGATGGTTCTTTTTAAGGAGATTTGTGTCTTTTTGATACTGCGTGTAGAACTATATTAAGATTTTAGTTAGTCTTGAAATAGAGTGAAGGTTCAGTGGGACATGATTTATGATCGTCGTGTTGTGTTTATGTTGTGTATAGAAGTCCCTCCTTTCATTCTTGCTGGTATAAACTACATGATTTATGATCGTTTGTTATTCACAACAATCTTTTAATTCAATTCTCATAAACTTAAGATTCTCAATTTATTCAGCCTCAAGTAAAGCAAGCACAAAAGAGTTGGAACGGATCAATATCCTATTTTACTCATATGCCAATGCCTCTTCTGGTTTGATCGAGTAAGTCAAATTTTGGCCCATGGAAATATCTCAATTTTCAGCATTGGTAGTTAGGTTTGCGTGGTACAAATATATATTATTTTTATTCAGTATTATACTTTTTAAATTCCCATCAACATTCAAATAATGAAAAATTTTCCTTTTGTGGTTGATATCTCACGCTTACTCTTGTATAATAATACTATCCTTCTTCATCAAAACTTCCCATCCATGTTCTTGTAATGATCAAGGAGGTTGTTTTCCTTATCTTTATGGAGACTTCTGAATACATGTATAGATAAGATCCATATGGTATGTAGTACTGACTGTTTCTTTAACAGTCCAGAAGGAATTGAAACTCTTTGTTCAGACATGGAAGTGGATCACACTGATGTAAGGATCTTGATGCTTGCTTGGTAAGTTGTAGTTAGATTGATACGATAACTCAATATTTTTGTGTCTATCATCCCATTGCCTAGAAACTAATGGATTGCACATACCAGGAAAATGAAAGCTGAAAAACAGGGATACTTTAACCTGGTAAGAATGTTTACTCTCTAGTGGGCCTCCGAATATTATATAAGTTATACAGCAGATCTTCTTTCTCGTATAGTTCCCCTTTATTTTCTGCAAAATGCATCATCATCATTGAATCCTTTCTATTCATTTACTAATTAGTACGGTAATCTGTGAAGTGTATATTTTGTGTGTTGAGCACCAGCTTGTAAGGAAAATTCTTTAGTTTATGACCTAACTTGAACAACAACTGTGTCCTTCAGTTCTATGGAAAAAAATTTCATTTATATTTATAGCTTCAAATTATTTGGAAGGTTTTGTTGATTGTTTATATATCTTATTTTCCTCTTGTGTTATTGTTCTCTTCCTTTTCTTTCAACATGCCCATGTTCCATCTTATTATATATCCTAATTAGTCCCTCGTGCCCCCTCCTTAGTAAATTCATTTTATGGAACCTTAACCTATTGCTTATTCTATAGGAGGAATGGCGTAGAGGCCTCAAATCCCTGAAGGCTGACACTGTTAGTAAACTAAAGAAGGCACTACCAGATCTCGAGAAAGAGGTACATTCTTGTCTTGTTAAAAGTTAAAAAATAAACAAGTACATATAGTTGGTGGATTGCTGAATTTTTGCACATAAAGTTCTTAATGATCAATACCTCACATTTTGAGAAGGTAAGGAGGCCATCAAATTTTGTGGACTTCTATTCATATGCATTTCGGTATTGTTTAACAGGTAAACAAATTATTTTAGGTGTATTTTTTTATTTTGAAGATCGGTTCATTTTCTTCTACTCTATATAAATTGATATTTACGTTTTCTTTAATCCATTAATTTTTTTTTTTTTTTTTTTCTTAGAGGAGAAGCAAAAGAGTATTGACATAGAGAGTATATGCGAGCTGCTGAATCTTGTTTTAGGGTCTCAGTTTCATGCTCAAGTCAATTCATTTGTTGAATACTTGAAGGTGAGTGCTGCACTACGTTTGTGTCATTGAAATTGCCACATTTATCCATGGGCATGGTTTATTTGCCACTGCAGTCGACTCCACCTCTGCCTCAAAGTACTTCTACATATTTAATAGTAGCCCTTAGTCTGAGAGAGTTACATTCTTGAGTTTTGGCCTCTCTTTAGCATACATAGTGGAGCACGCTGCCCCGTGTCGATAAAATTGACTTTACCATATTTCTTCTGTTAGCTTAAGCCATAGCTTTCTAGGCAATTCGTTTTTATGTTAATCTGCTTCTCACAAGGAGAACTTTAGCACATAGGTAACCTTCAAAGATATATTGTAGAGTAACAAAAATTTCTTGCTTTGATTTTTTTTTTTTTTTTTTTTTTTTAGGGTTATTGGTTGTTTAATCCCCTGTTTGTTGTCTTGCCCCTCATCTAGGCAGAATAAAATTTATTTCTTATTTACTCGTATTATGTATGCAGATACAAAGTGACTATAAGGTTATTAATATGGATCAATGGATGGGATTCTTTCGGTTCTGCAATGAGGTATTTTATCTCTCCCTTTCCCCTCAAAGCACATTAACACAATTCATTATATTTGCTTTCCATCTTCCCACCCAGTAATCACCATGGACCATGGGTTCAATAAGAGCCATGAAATCAATAAAGAGTTTAGAGAGAATAGTTTTAAGTCATGATGACCACCTGCTTAAGATTTAATATCCTATGAGTTTTCTTGACAACCAAATGTAGGAGGGTTAGGTAGTTATTTTGTGAGAATAATCACGGTGCACCTACTAGAAACATGCTCTGAATATAAGAAGAGAGTCATTGTCAATCCAATGATCCTATCCCTTTTATTCAATGAGATTGGTATTTAAATTTATATATCTATATATACTATATATATCTAAATGTACAAGCTTAACCGAGATAGGAGAAAAGACAGTAAAGGACAACACAAATAACATATTTACAAAACTATAATTATACTACTAATCTAAGAACTATAATATTTATATTTTGCTTGCCATATGAACCTAAAAATACAGAAAACTATTAAATTGCTAATTGGGCAATCTAGGAGGGGATCGACTCATCCTGTTCGATTAGAGCCATGTGATAATAAACATAGAAGGAATGTGTTCAAATCATATGGTGGCCACCTACTTGGAATTTAATGTTAATATGCATTATCTTAGCACAATCAATATGTAGTTGGGTCAGGCCGGCAGTTATCTCGTGAGAATAACTTATCTATCCACCCCCAATTGATTTGTTCTTTATTGATATCCTCAATTCAAGTTGACCCATGAATCATGATGATCATTGTGCAGATAAGTTTTCCGGACCTGAGCAATTACGATTCGGAACTTGCTTGGCCGTTGATCCTCGACAATTTTGTTGAATGGTTACAAGCAAAACAAAGTTAAAAAACGGAACGTCTTCATCATACATTGTATACTCCCACAGTCGTTGAAGGCAAGTATCCTATTCTCTTACGCACTTCATACTCAATGTACGTCGTCGTTTCGAGCTGACCACATTTATTGAACTTGTTCTTTTTTTCTGCAGGCTCGCTTGGTTGGATTACACATTGCATAGCAGCAGAATTTTCACTTATTATTCCTTCTTTCACTGTTCTAACTTCTTTGAAATCGAGGATGATTCCCATTCTTATGCTAAAATTATAATTTCAAACATTCATGGATGATTCTGCTAAAGTTTCCTCCCACGTCCCACCCTTTTTTTTTGGTATCCATTCTTCATCATCTTAGGCATCCAATTGACTTGACTATTTTACTTTTACTTGTAAGAGCAGCTCAAGCTGAACATTTTCTAACAGGATAAGTGTTGGAATATTTTTATTGCCTTTTTTAACACTTATT AAAAGGAAAGCTGAAGTTTTGTTCTTGCTTTTATATTTCCTCTATTCTCCGATTTGGTGCGATAAAAATCAATTTCTTCTTTGCTTTCTCTTAGTATCTCCTCCATTGCAATCGAATTGCGGAAGAAGAAGATGCGGCGTACTACAAGGAAGACCGGTCAACCAAATTCAACTTCCGTTAATTCTTCCGCCGTGGATCTCTTTCGTTCCGCCTCAAGTAAAGCAAGCACAAAAGAGTTGGAACGGATCAATATCCTATTTTACTCATATGCCAATGCCTCTTCTGGTTTGATCGATCCAGAAGGAATTGAAACTCTTTGTTCAGACATGGAAGTGGATCACACTGATGTAAGGATCTTGATGCTTGCTTGGAAAATGAAAGCTGAAAAACAGGGATACTTTAACCTGGAGGAATGGCGTAGAGGCCTCAAATCCCTGAAGGCTGACACTGTTAGTAAACTAAAGAAGGCACTACCAGATCTCGAGAAAGAGGTAAGGAGGCCATCAAATTTTGTGGACTTCTATTCATATGCATTTCGGTATTGTTTAACAGAGGAGAAGCAAAAGAGTATTGACATAGAGAGTATATGCGAGCTGCTGAATCTTGTTTTAGGGTCTCAGTTTCATGCTCAAGTCAATTCATTTGTTGAATACTTGAAGATACAAAGTGACTATAAGGTTATTAATATGGATCAATGGATGGGATTCTTTCGGTTCTGCAATGAGATAAGTTTTCCGGACCTGAGCAATTACGATTCGGAACTTGCTTGGCCGTTGATCCTCGACAATTTTGTTGAATGGTTACAAGCAAAACAAAGTTAAAAAACGGAACGTCTTCATCATACATTGTATACTCCCACAGTCGTTGAAGGCTCGCTTGGTTGGATTACACATTGCATAGCAGCAGAATTTTCACTTATTATTCCTTCTTTCACTGTTCTAACTTCTTTGAAATCGAGGATGATTCCCATTCTTATGCTAAAATTATAATTTCAAACATTCATGGATGATTCTGCTAAAGTTTCCTCCCACGTCCCACCCTTTTTTTTTGGTATCCATTCTTCATCATCTTAGGCATCCAATTGACTTGACTATTTTACTTTTACTTGTAAGAGCAGCTCAAGCTGAACATTTTCTAACAGGATAAGTGTTGGAATATTTTTATTGCCTTTTTTAACACTTATT ATGCGGCGTACTACAAGGAAGACCGGTCAACCAAATTCAACTTCCGTTAATTCTTCCGCCGTGGATCTCTTTCGTTCCGCCTCAAGTAAAGCAAGCACAAAAGAGTTGGAACGGATCAATATCCTATTTTACTCATATGCCAATGCCTCTTCTGGTTTGATCGATCCAGAAGGAATTGAAACTCTTTGTTCAGACATGGAAGTGGATCACACTGATGTAAGGATCTTGATGCTTGCTTGGAAAATGAAAGCTGAAAAACAGGGATACTTTAACCTGGAGGAATGGCGTAGAGGCCTCAAATCCCTGAAGGCTGACACTGTTAGTAAACTAAAGAAGGCACTACCAGATCTCGAGAAAGAGGTAAGGAGGCCATCAAATTTTGTGGACTTCTATTCATATGCATTTCGGTATTGTTTAACAGAGGAGAAGCAAAAGAGTATTGACATAGAGAGTATATGCGAGCTGCTGAATCTTGTTTTAGGGTCTCAGTTTCATGCTCAAGTCAATTCATTTGTTGAATACTTGAAGATACAAAGTGACTATAAGGTTATTAATATGGATCAATGGATGGGATTCTTTCGGTTCTGCAATGAGATAAGTTTTCCGGACCTGAGCAATTACGATTCGGAACTTGCTTGGCCGTTGATCCTCGACAATTTTGTTGAATGGTTACAAGCAAAACAAAGTTAA MRRTTRKTGQPNSTSVNSSAVDLFRSASSKASTKELERINILFYSYANASSGLIDPEGIETLCSDMEVDHTDVRILMLAWKMKAEKQGYFNLEEWRRGLKSLKADTVSKLKKALPDLEKEVRRPSNFVDFYSYAFRYCLTEEKQKSIDIESICELLNLVLGSQFHAQVNSFVEYLKIQSDYKVINMDQWMGFFRFCNEISFPDLSNYDSELAWPLILDNFVEWLQAKQS
BLAST of CmaCh01G001730 vs. Swiss-Prot
Match: DCNL4_MOUSE (DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.9e-34 Identity = 80/186 (43.01%), Postives = 111/186 (59.68%), Query Frame = 1
BLAST of CmaCh01G001730 vs. Swiss-Prot
Match: DCNL4_HUMAN (DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2) HSP 1 Score: 146.0 bits (367), Expect = 5.1e-34 Identity = 79/186 (42.47%), Postives = 112/186 (60.22%), Query Frame = 1
BLAST of CmaCh01G001730 vs. Swiss-Prot
Match: DCNL5_HUMAN (DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 9.7e-33 Identity = 72/187 (38.50%), Postives = 114/187 (60.96%), Query Frame = 1
BLAST of CmaCh01G001730 vs. Swiss-Prot
Match: DCNL5_RAT (DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.3e-32 Identity = 72/187 (38.50%), Postives = 114/187 (60.96%), Query Frame = 1
BLAST of CmaCh01G001730 vs. Swiss-Prot
Match: DCNL5_MOUSE (DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=1 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.3e-32 Identity = 72/187 (38.50%), Postives = 114/187 (60.96%), Query Frame = 1
BLAST of CmaCh01G001730 vs. TrEMBL
Match: A0A0A0KYL5_CUCSA (Defective in cullin neddylation protein OS=Cucumis sativus GN=Csa_4G006480 PE=4 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 1.1e-115 Identity = 207/228 (90.79%), Postives = 221/228 (96.93%), Query Frame = 1
BLAST of CmaCh01G001730 vs. TrEMBL
Match: D7TZF8_VITVI (Defective in cullin neddylation protein OS=Vitis vinifera GN=VIT_09s0002g08930 PE=4 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 4.9e-108 Identity = 199/229 (86.90%), Postives = 212/229 (92.58%), Query Frame = 1
BLAST of CmaCh01G001730 vs. TrEMBL
Match: A0A067L0J9_JATCU (Defective in cullin neddylation protein OS=Jatropha curcas GN=JCGZ_27014 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 2.4e-107 Identity = 193/229 (84.28%), Postives = 214/229 (93.45%), Query Frame = 1
BLAST of CmaCh01G001730 vs. TrEMBL
Match: B9SMU9_RICCO (Defective in cullin neddylation protein OS=Ricinus communis GN=RCOM_0471020 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 4.1e-107 Identity = 192/229 (83.84%), Postives = 214/229 (93.45%), Query Frame = 1
BLAST of CmaCh01G001730 vs. TrEMBL
Match: B9GVI7_POPTR (Defective in cullin neddylation protein OS=Populus trichocarpa GN=POPTR_0003s17870g PE=4 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 9.2e-107 Identity = 191/230 (83.04%), Postives = 215/230 (93.48%), Query Frame = 1
BLAST of CmaCh01G001730 vs. TAIR10
Match: AT1G15860.3 (AT1G15860.3 Domain of unknown function (DUF298)) HSP 1 Score: 343.6 bits (880), Expect = 9.5e-95 Identity = 171/238 (71.85%), Postives = 197/238 (82.77%), Query Frame = 1
BLAST of CmaCh01G001730 vs. TAIR10
Match: AT3G12760.1 (AT3G12760.1 Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060)) HSP 1 Score: 117.9 bits (294), Expect = 8.5e-27 Identity = 67/210 (31.90%), Postives = 119/210 (56.67%), Query Frame = 1
BLAST of CmaCh01G001730 vs. TAIR10
Match: AT3G28970.1 (AT3G28970.1 Domain of unknown function (DUF298)) HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06 Identity = 31/98 (31.63%), Postives = 49/98 (50.00%), Query Frame = 1
BLAST of CmaCh01G001730 vs. NCBI nr
Match: gi|659108387|ref|XP_008454171.1| (PREDICTED: DCN1-like protein 4 [Cucumis melo]) HSP 1 Score: 427.9 bits (1099), Expect = 1.1e-116 Identity = 209/228 (91.67%), Postives = 222/228 (97.37%), Query Frame = 1
BLAST of CmaCh01G001730 vs. NCBI nr
Match: gi|449468930|ref|XP_004152174.1| (PREDICTED: DCN1-like protein 5 [Cucumis sativus]) HSP 1 Score: 424.1 bits (1089), Expect = 1.6e-115 Identity = 207/228 (90.79%), Postives = 221/228 (96.93%), Query Frame = 1
BLAST of CmaCh01G001730 vs. NCBI nr
Match: gi|700197783|gb|KGN52941.1| (hypothetical protein Csa_4G006480 [Cucumis sativus]) HSP 1 Score: 424.1 bits (1089), Expect = 1.6e-115 Identity = 207/228 (90.79%), Postives = 221/228 (96.93%), Query Frame = 1
BLAST of CmaCh01G001730 vs. NCBI nr
Match: gi|225443086|ref|XP_002273365.1| (PREDICTED: DCN1-like protein 4 isoform X1 [Vitis vinifera]) HSP 1 Score: 398.7 bits (1023), Expect = 7.0e-108 Identity = 199/229 (86.90%), Postives = 212/229 (92.58%), Query Frame = 1
BLAST of CmaCh01G001730 vs. NCBI nr
Match: gi|802565798|ref|XP_012067535.1| (PREDICTED: DCN1-like protein 4 [Jatropha curcas]) HSP 1 Score: 396.4 bits (1017), Expect = 3.5e-107 Identity = 193/229 (84.28%), Postives = 214/229 (93.45%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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