CmaCh20G008590 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G008590
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionAgamous-like MADS-box protein A, putative
LocationCma_Chr20 : 4138257 .. 4139141 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAATCTCTCGGTCGCCGGAAAATTGAGATAAAGAAGCTTGAGAAGAAGAGTAGCCAGCAAGTTACCTTCTCTAAACGCCGCGCCGGACTCTTCAACTAGGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCGCCTCTTCCAGCAACAAGCTCTATACATTCGGTCATCCTAATGTTGAGTCGCTCTTGGATCGTTTTCTCACCGGAAATTCTGCTCCGCCTAAGCCGGCAGAGGCCTACCTCCCTTTGGAGGAGTTGAACCGCGATTTTGACGATGTGGCCGCAGAGTACGACTTCGAGAAGAGGCGGACGGCAGAGCGGTTGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCTGGTCATCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGCAACAAGAAAAGAAGGATCTCCGATACCTGCGCTGCAGCCGTCGACACCTCTGTCGATTGACCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCCTCTTCAAAAGTCTCCAATGGCCGTCTACGCCTCCATCGATCGACCTCGTCGAAAACCTCGAACGGCTGCCGACGTCTCCATCAATTGACCTCTTCGAAAACCTCCAATGGCCATCGACGCCTCCATCGATCGACCTCGTCGAAAATCTCCAACGGCCGCAGACGCCTCCATCGATTGACCTCGTCGAAAGCCTCCAATGGTCGCCGATGCCGTTGATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCAGATCTCTGGAAACCACTCTGTCGCACGCCGACTGAATATGCTAGACTAG

mRNA sequence

ATGAAGAAATCTCTCGGTCGCCGGAAAATTGAGATAAAGAAGCTTGAGAAGAAGAGTAGCCAGCAAGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCGCCTCTTCCAGCAACAAGCTCTATACATTCGGTCATCCTAATGTTGAGTCGCTCTTGGATCGTTTTCTCACCGGAAATTCTGCTCCGCCTAAGCCGGCAGAGGCCTACCTCCCTTTGGAGGAGTTGAACCGCGATTTTGACGATGTGGCCGCAGAGTACGACTTCGAGAAGAGGCGGACGGCAGAGCGGTTGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCTGGTCATCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGCAACAAGAAAAGAAGGATCTCCGATACCTGCGCTGCAGCCGTCGACACCTCTGTCGATTGACCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCCTCTTCAAAAGTCTCCAATGGCCGTCTACGCCTCCATCGATCGACCTCGTCGAAAACCTCGAACGGCTGCCGACGTCTCCATCAATTGACCTCTTCGAAAACCTCCAATGGCCATCGACGCCTCCATCGATCGACCTCGTCGAAAATCTCCAACGGCCGCAGACGCCTCCATCGATTGACCTCGTCGAAAGCCTCCAATGGTCGCCGATGCCGTTGATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCAGATCTCTGGAAACCACTCTGTCGCACGCCGACTGAATATGCTAGACTAG

Coding sequence (CDS)

ATGAAGAAATCTCTCGGTCGCCGGAAAATTGAGATAAAGAAGCTTGAGAAGAAGAGTAGCCAGCAAGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCGCCTCTTCCAGCAACAAGCTCTATACATTCGGTCATCCTAATGTTGAGTCGCTCTTGGATCGTTTTCTCACCGGAAATTCTGCTCCGCCTAAGCCGGCAGAGGCCTACCTCCCTTTGGAGGAGTTGAACCGCGATTTTGACGATGTGGCCGCAGAGTACGACTTCGAGAAGAGGCGGACGGCAGAGCGGTTGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCTGGTCATCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGCAACAAGAAAAGAAGGATCTCCGATACCTGCGCTGCAGCCGTCGACACCTCTGTCGATTGACCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCCTCTTCAAAAGTCTCCAATGGCCGTCTACGCCTCCATCGATCGACCTCGTCGAAAACCTCGAACGGCTGCCGACGTCTCCATCAATTGACCTCTTCGAAAACCTCCAATGGCCATCGACGCCTCCATCGATCGACCTCGTCGAAAATCTCCAACGGCCGCAGACGCCTCCATCGATTGACCTCGTCGAAAGCCTCCAATGGTCGCCGATGCCGTTGATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCAGATCTCTGGAAACCACTCTGTCGCACGCCGACTGAATATGCTAGACTAG

Protein sequence

MKKSLGRRKIEIKKLEKKSSQQAAELSVLCGAEIAILVASSSNKLYTFGHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERLSNDRFWWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKEGSPIPALQPSTPLSIDLVENLQRPPTPPSIGLFKSLQWPSTPPSIDLVENLERLPTSPSIDLFENLQWPSTPPSIDLVENLQRPQTPPSIDLVESLQWSPMPLIHLAENDQCLPSSFQISGNHSVARRLNMLD
Homology
[Close]
BLAST of CmaCh20G008590 vs. Swiss-Prot
Match: AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.5e-16
Identity = 53/169 (31.36%), Postives = 90/169 (53.25%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           +KKS GR+KIE+ K++ +S+ Q             A+EL  LCGAE+AI+V S   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVESLLDRFLTGNSAPP--------KPAEAYLPLEELNRDFDDVAAEYDFEK---- 120
           FGHPNV+S++DRF+  N  PP        +       +++LN     V ++ + EK    
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 --RRTAERLSNDRFWWDEPLESMKIDELKRFWSSLVELRGKVAERVEKF 143
             ++  E+      WW++P+E + + +L+ F  +L  L+  V     +F
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRF 170

[Close]
BLAST of CmaCh20G008590 vs. Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.2e-13
Identity = 53/172 (30.81%), Postives = 91/172 (52.91%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYTF 61
           K+S+GR+KI + K++K+S +Q             A+EL  LCGAEI I+V S + K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVESLLDRFLTGNSAPPKPAEAYLPLE----ELNRDFDDVAAEYDFEKRR--TAERL 121
           GHP+VES+LDR+++ N+     ++          ELN     + +E + EK++    E +
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 SNDRF------WWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKE 149
             +        WW++P+E M + +L+    +L ELR  V   +  F   + +
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDD 230

[Close]
BLAST of CmaCh20G008590 vs. Swiss-Prot
Match: AGL23_ARATH (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana GN=AGL23 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.8e-12
Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           +KK+LGRRK+EI K+ K+S+ Q             A+E   LC A+IA++V S + K+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVESLLDRF----LTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERLS 115
           FGHPNV+ LLD F    +  N+     +   L ++ LN+ + +V AE + E++    R  
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

[Close]
BLAST of CmaCh20G008590 vs. Swiss-Prot
Match: AGL28_ARATH (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana GN=AGL28 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.5e-11
Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQA-------------AELSVLCGAEIAILVASSSNKLYTF 61
           +K+LGRRKIE+ K+  +S+ Q              +EL  LC AEIAI+V S S K Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVESLLD----RFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERLSN 121
           GHPNV  LLD    R +  N+     +   L ++ LN    +V AE + E+      + N
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 DR------FWWDEPLESMKIDELKRFWSSLVELRGKVAERV 140
           +R       WW      + + +       L  L+ +V E+V
Sbjct: 123 ERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKV 163

[Close]
BLAST of CmaCh20G008590 vs. Swiss-Prot
Match: AGL29_ARATH (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana GN=AGL29 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.6e-08
Identity = 45/165 (27.27%), Postives = 85/165 (51.52%), Query Frame = 1 

Query: 5   LGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYTFGHP 64
           +GRRKI+++ ++  +++Q             A+EL+ LC AE+ I+V S   K +++G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 65  NVESLLDRFL----TGNSAPPKPAEAYLP-LEELNRDFDDVAAEYDFEKRR------TAE 124
           N++S+ +RF+      +S   + +  Y P L+ L+   D +  E + EK R        E
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 125 RLSNDRFWWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTAT 146
              ++RF   E +E++ +DEL  +   L  + G++  +V    A+
Sbjct: 121 SAGDERF--KESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQAS 163

[Close]
BLAST of CmaCh20G008590 vs. TrEMBL
Match: A0A0A0LE01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.5e-45
Identity = 108/204 (52.94%), Postives = 138/204 (67.65%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           MKK+LGR+KIEIKKLEKKSS+Q             A ELSVLCGAE+AI+V S ++KL+ 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERL----- 120
           FGHP+V+ LLDR+LTGN +PPKPAE+Y+P+ E NRDF D A E++ EK+R AE +     
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 128

Query: 121 --SNDRFWWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKEGSPIPAL----Q 180
              N  FWW E +E ++++ELK F S+L++LR KVAERVEK TA R  G  +PAL    Q
Sbjct: 129 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 188

[Close]
BLAST of CmaCh20G008590 vs. TrEMBL
Match: A0A0A0LLS2_CUCSA (Mads box protein OS=Cucumis sativus GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.2e-45
Identity = 102/162 (62.96%), Postives = 118/162 (72.84%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           MKKSLGR+KIEIKKL  KS +Q             AAELS+L GAEIAILV SS++K+YT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERLSNDRF 120
           FGHPNV+ L+DRFLT N  PPKP EAYLPLEELNRD  DV AE++ EKRR         F
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKEG 150
           WWDE +E M I++LKRF SSL+ELRGKVAERVE+  A R +G
Sbjct: 121 WWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQG 162

[Close]
BLAST of CmaCh20G008590 vs. TrEMBL
Match: A0A0A0LW53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181400 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.1e-44
Identity = 101/166 (60.84%), Postives = 121/166 (72.89%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           MKKS GRRKIEIK+L+K +++Q             AAELS+LCGAEIAIL+ SS  K+YT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERLSN-DR 120
           FGHPNV++LLDRFLTGN  PPKPAEAYLPL ELN D     AE++ EK+R  ERL N +R
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKEGSPI 153
           FWWDE LE M++DELK F SSL++LR  VA R+EK  A R E  P+
Sbjct: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPV 166

[Close]
BLAST of CmaCh20G008590 vs. TrEMBL
Match: A0A022RIX0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020886mg PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.4e-24
Identity = 71/157 (45.22%), Postives = 100/157 (63.69%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYTF 61
           KK++GRRKIEIKK+EKKSS Q             A+ELSVLCGAEIAILV S +NK+Y++
Sbjct: 13  KKTMGRRKIEIKKIEKKSSLQVTFSKRRIGLFRKASELSVLCGAEIAILVQSPANKIYSY 72

Query: 62  GHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRD-FDDVAAEYDFEKR---RTAERLSN 121
           GHP+VE+LLDR+ TG       A + +P  E  R  +D+   + +  KR   + +   SN
Sbjct: 73  GHPSVETLLDRYQTGGGG--GAASSIIPYREDGRSKYDEAVKKLEIVKRSMKQESNSSSN 132

Query: 122 DRFWWDEPLESMKIDELKRFWSSLVELRGKVAERVEK 142
            RFWWDEP+E M++ EL+ +  ++  L+  V  RV++
Sbjct: 133 TRFWWDEPMEGMELYELEEYAEAMEALKDNVLRRVDE 167

[Close]
BLAST of CmaCh20G008590 vs. TrEMBL
Match: W9QW40_9ROSA (Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002949 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.7e-23
Identity = 75/186 (40.32%), Postives = 112/186 (60.22%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYTF 61
           KK+ GR++IEIKKLE  S++Q             AAELSVLCG+E+A LV S + KL+TF
Sbjct: 11  KKTQGRQRIEIKKLENGSNKQVTFSKRRSGLFRKAAELSVLCGSEVAALVFSPNGKLFTF 70

Query: 62  GHPNVESLLDRFLTG-NSAPPKPAEAYLPL-----EELNRDFDDVAAEYDFEKRRTAE-- 121
           GHP+V+S++ R+  G N+AP   A     +     EE NRD+ +   E + EK R AE  
Sbjct: 71  GHPSVDSVVLRYAHGTNTAPAAAASTSTNVVTNVSEEFNRDYVEAVKELEAEKTRLAEEK 130

Query: 122 ---RLSNDRFWWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKEGSP----IP 160
              ++  ++FWWDE +E M ++EL++  ++L+ELR +VA RV+   A   E +     + 
Sbjct: 131 KKAKIGGEKFWWDEGIEGMGMEELRQHMAALIELRRRVAARVQGLKAAPPENATSLAGVV 190

[Close]
BLAST of CmaCh20G008590 vs. TAIR10
Match: AT5G60440.1 (AT5G60440.1 AGAMOUS-like 62)

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-17
Identity = 53/169 (31.36%), Postives = 90/169 (53.25%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           +KKS GR+KIE+ K++ +S+ Q             A+EL  LCGAE+AI+V S   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVESLLDRFLTGNSAPP--------KPAEAYLPLEELNRDFDDVAAEYDFEK---- 120
           FGHPNV+S++DRF+  N  PP        +       +++LN     V ++ + EK    
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 --RRTAERLSNDRFWWDEPLESMKIDELKRFWSSLVELRGKVAERVEKF 143
             ++  E+      WW++P+E + + +L+ F  +L  L+  V     +F
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRF 170

[Close]
BLAST of CmaCh20G008590 vs. TAIR10
Match: AT2G24840.1 (AT2G24840.1 AGAMOUS-like 61)

HSP 1 Score: 78.6 bits (192), Expect = 7.0e-15
Identity = 53/172 (30.81%), Postives = 91/172 (52.91%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYTF 61
           K+S+GR+KI + K++K+S +Q             A+EL  LCGAEI I+V S + K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVESLLDRFLTGNSAPPKPAEAYLPLE----ELNRDFDDVAAEYDFEKRR--TAERL 121
           GHP+VES+LDR+++ N+     ++          ELN     + +E + EK++    E +
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 SNDRF------WWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKE 149
             +        WW++P+E M + +L+    +L ELR  V   +  F   + +
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDD 230

[Close]
BLAST of CmaCh20G008590 vs. TAIR10
Match: AT1G65360.1 (AT1G65360.1 AGAMOUS-like 23)

HSP 1 Score: 72.8 bits (177), Expect = 3.8e-13
Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           +KK+LGRRK+EI K+ K+S+ Q             A+E   LC A+IA++V S + K+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVESLLDRF----LTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERLS 115
           FGHPNV+ LLD F    +  N+     +   L ++ LN+ + +V AE + E++    R  
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

[Close]
BLAST of CmaCh20G008590 vs. TAIR10
Match: AT1G01530.1 (AT1G01530.1 AGAMOUS-like 28)

HSP 1 Score: 69.3 bits (168), Expect = 4.2e-12
Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQA-------------AELSVLCGAEIAILVASSSNKLYTF 61
           +K+LGRRKIE+ K+  +S+ Q              +EL  LC AEIAI+V S S K Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVESLLD----RFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERLSN 121
           GHPNV  LLD    R +  N+     +   L ++ LN    +V AE + E+      + N
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 DR------FWWDEPLESMKIDELKRFWSSLVELRGKVAERV 140
           +R       WW      + + +       L  L+ +V E+V
Sbjct: 123 ERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKV 163

[Close]
BLAST of CmaCh20G008590 vs. TAIR10
Match: AT1G17310.1 (AT1G17310.1 MADS-box transcription factor family protein)

HSP 1 Score: 65.5 bits (158), Expect = 6.1e-11
Identity = 50/151 (33.11%), Postives = 82/151 (54.30%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYTF 61
           K + GR+KIEIKK+E+++ +Q             +AELSVL GA+IA++  S  +++Y F
Sbjct: 44  KTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRF 103

Query: 62  GHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERLSNDRFW 121
           GH  V++L+D++L  +   P   E Y           D AA  D E RR          W
Sbjct: 104 GH--VDALIDKYLRKS---PVKLEGY---------SGDNAA--DEESRRP---------W 163

Query: 122 WDEPLESMKIDELKRFWSSLVELRGKVAERV 140
           W+ P+ES+  +EL+ + ++L  LR  + +++
Sbjct: 164 WERPVESVPEEELEEYMAALSMLRENIGKKI 169

[Close]
BLAST of CmaCh20G008590 vs. NCBI nr
Match: gi|659118116|ref|XP_008458954.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 2.4e-49
Identity = 120/189 (63.49%), Postives = 136/189 (71.96%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           MKKSLGRRKIEIKKL+KKS+QQ             AAELS+LCGAEIA+LV SS  K+YT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVESLLDRFLTGNSA-PPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERLSN-D 120
           FGHPNV++LLDRFLTGN+  PPKPAEAYLP+ ELNRD     AE++ EKRR AER  N +
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 RFWWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKEGSPIPALQPSTPLSIDL 175
           RFWWDEPLESMKIDELKRF SSLVELR  V ER+EK          I      TP SID+
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEK----------IEDRHCVTP-SIDI 178

[Close]
BLAST of CmaCh20G008590 vs. NCBI nr
Match: gi|700204855|gb|KGN59988.1| (hypothetical protein Csa_3G860240 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 8.0e-45
Identity = 108/204 (52.94%), Postives = 138/204 (67.65%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           MKK+LGR+KIEIKKLEKKSS+Q             A ELSVLCGAE+AI+V S ++KL+ 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERL----- 120
           FGHP+V+ LLDR+LTGN +PPKPAE+Y+P+ E NRDF D A E++ EK+R AE +     
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 128

Query: 121 --SNDRFWWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKEGSPIPAL----Q 180
              N  FWW E +E ++++ELK F S+L++LR KVAERVEK TA R  G  +PAL    Q
Sbjct: 129 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 188

[Close]
BLAST of CmaCh20G008590 vs. NCBI nr
Match: gi|778686644|ref|XP_004147877.2| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 8.0e-45
Identity = 108/204 (52.94%), Postives = 138/204 (67.65%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           MKK+LGR+KIEIKKLEKKSS+Q             A ELSVLCGAE+AI+V S ++KL+ 
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERL----- 120
           FGHP+V+ LLDR+LTGN +PPKPAE+Y+P+ E NRDF D A E++ EK+R AE +     
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 120

Query: 121 --SNDRFWWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKEGSPIPAL----Q 180
              N  FWW E +E ++++ELK F S+L++LR KVAERVEK TA R  G  +PAL    Q
Sbjct: 121 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 180

[Close]
BLAST of CmaCh20G008590 vs. NCBI nr
Match: gi|449463992|ref|XP_004149713.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 1.0e-44
Identity = 102/162 (62.96%), Postives = 118/162 (72.84%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           MKKSLGR+KIEIKKL  KS +Q             AAELS+L GAEIAILV SS++K+YT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERLSNDRF 120
           FGHPNV+ L+DRFLT N  PPKP EAYLPLEELNRD  DV AE++ EKRR         F
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKEG 150
           WWDE +E M I++LKRF SSL+ELRGKVAERVE+  A R +G
Sbjct: 121 WWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQG 162

[Close]
BLAST of CmaCh20G008590 vs. NCBI nr
Match: gi|449443690|ref|XP_004139610.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 8.8e-44
Identity = 101/166 (60.84%), Postives = 121/166 (72.89%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQ-------------AAELSVLCGAEIAILVASSSNKLYT 60
           MKKS GRRKIEIK+L+K +++Q             AAELS+LCGAEIAIL+ SS  K+YT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDFEKRRTAERLSN-DR 120
           FGHPNV++LLDRFLTGN  PPKPAEAYLPL ELN D     AE++ EK+R  ERL N +R
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDEPLESMKIDELKRFWSSLVELRGKVAERVEKFTATRKEGSPI 153
           FWWDE LE M++DELK F SSL++LR  VA R+EK  A R E  P+
Sbjct: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPV 166

The following BLAST results are available for this feature:
BLAST of CmaCh20G008590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AGL62_ARATH3.5e-1631.36Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1[more]
AGL61_ARATH1.2e-1330.81Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1[more]
AGL23_ARATH6.8e-1235.51Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana GN=AGL23 PE=2 SV=1[more]
AGL28_ARATH7.5e-1132.30Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana GN=AGL28 PE=2 SV=1[more]
AGL29_ARATH4.6e-0827.27Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana GN=AGL29 PE=2 SV=1[more]
BLAST of CmaCh20G008590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LE01_CUCSA5.5e-4552.94Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860240 PE=4 SV=1[more]
A0A0A0LLS2_CUCSA7.2e-4562.96Mads box protein OS=Cucumis sativus GN=Csa_2G277060 PE=4 SV=1[more]
A0A0A0LW53_CUCSA6.1e-4460.84Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181400 PE=4 SV=1[more]
A0A022RIX0_ERYGU2.4e-2445.22Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020886mg PE=4 SV=1[more]
W9QW40_9ROSA2.7e-2340.32Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002949 PE=4 SV=1[more]
BLAST of CmaCh20G008590 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60440.12.0e-1731.36 AGAMOUS-like 62[more]
AT2G24840.17.0e-1530.81 AGAMOUS-like 61[more]
AT1G65360.13.8e-1335.51 AGAMOUS-like 23[more]
AT1G01530.14.2e-1232.30 AGAMOUS-like 28[more]
AT1G17310.16.1e-1133.11 MADS-box transcription factor family protein[more]
BLAST of CmaCh20G008590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118116|ref|XP_008458954.1|2.4e-4963.49PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo][more]
gi|700204855|gb|KGN59988.1|8.0e-4552.94hypothetical protein Csa_3G860240 [Cucumis sativus][more]
gi|778686644|ref|XP_004147877.2|8.0e-4552.94PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus][more]
gi|449463992|ref|XP_004149713.1|1.0e-4462.96PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus][more]
gi|449443690|ref|XP_004139610.1|8.8e-4460.84PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G008590.1CmaCh20G008590.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 29..50
score: 9.7E-5coord: 14..29
score: 9.
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 21..48
score: 8.
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 5..51
score: 5.4
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 5..52
score: 12
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 6..62
score: 5.23
NoneNo IPR availableunknownCoilCoilcoord: 77..97
scor
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 6..142
score: 1.9
NoneNo IPR availablePANTHERPTHR11945:SF164SUBFAMILY NOT NAMEDcoord: 6..142
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh20G008590CmoCh20G008700Cucurbita moschata (Rifu)cmacmoB551
CmaCh20G008590Cp4.1LG16g02310Cucurbita pepo (Zucchini)cmacpeB565
CmaCh20G008590Carg23640Silver-seed gourdcarcmaB1104
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G008590Cucurbita maxima (Rimu)cmacmaB469
CmaCh20G008590Cucurbita maxima (Rimu)cmacmaB446
CmaCh20G008590Cucumber (Gy14) v1cgycmaB0253
CmaCh20G008590Cucurbita moschata (Rifu)cmacmoB548
CmaCh20G008590Cucurbita moschata (Rifu)cmacmoB554
CmaCh20G008590Wild cucumber (PI 183967)cmacpiB547
CmaCh20G008590Cucumber (Chinese Long) v2cmacuB542
CmaCh20G008590Cucumber (Chinese Long) v2cmacuB546
CmaCh20G008590Watermelon (Charleston Gray)cmawcgB477
CmaCh20G008590Watermelon (Charleston Gray)cmawcgB485
CmaCh20G008590Watermelon (97103) v1cmawmB526
CmaCh20G008590Watermelon (97103) v1cmawmB544
CmaCh20G008590Cucurbita pepo (Zucchini)cmacpeB561
CmaCh20G008590Cucurbita pepo (Zucchini)cmacpeB585
CmaCh20G008590Bottle gourd (USVL1VR-Ls)cmalsiB507
CmaCh20G008590Bottle gourd (USVL1VR-Ls)cmalsiB514
CmaCh20G008590Cucumber (Gy14) v2cgybcmaB218
CmaCh20G008590Melon (DHL92) v3.6.1cmamedB588
CmaCh20G008590Silver-seed gourdcarcmaB1232
CmaCh20G008590Cucumber (Chinese Long) v3cmacucB0651
CmaCh20G008590Watermelon (97103) v2cmawmbB567
CmaCh20G008590Watermelon (97103) v2cmawmbB570
CmaCh20G008590Wax gourdcmawgoB0682
CmaCh20G008590Wax gourdcmawgoB0684