CmaCh20G008130 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G008130
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr20 : 3824421 .. 3832452 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTCCGAACAGTACGTCGGCGACGCCCTCGCACTCTGTTCCCGGCAGCCATGCTGCCACCAGCGCGTCCAACTGCGACATGTACGGATGAATCGTCAGGGGTCGGCCGGAGACGAGGACAACGACGCACTTGACGACGTTGCACACGTGCTGGATCGTGTCCAAGCCTCCTTCAGGGATAGTCAGGTTCAGGTTGTCGCCATTGGTCTCGGCGTACGGCGGTTCTCCTACCACGACAATGGCGTACGTGAAGTTGTTCGCCTTCACGTAATCGGCCGTCGGACTTACGTCGTGTACAACCTCCGTGTTTGGATCGACGCTTTTCTTCACCGCCTCGAGGATGGTGGTTCCGGTTGTGAGATTGTCGCCGCTGATTCCTTTCCATTTGATCGTCCAACCGCCGCACTGGTAACCTAGATTGTCGGCGTGAGTTCCAGCTACTAAGATCTTCGGTGCCTTCTTCGACAGAGGAAGAACTGGATCATCTGCATTTTCGCCGTTCTTCAATAGAACAAGTGATTTCCTCACTGCTTCTCTTGCCAAATCTCTGTGTTCCTGTTCAATTGAATTGCTAGATTTGTCAAAATGATATTCAAACTAAGTTTCTTTGTGTTTTTAGGTCAATTAACCTGGCTTCCAAGCTCATTTACAAATCTGTCATCGGCCAATGGATTCTCAAACAGCCCCATTACGAACTTGACTCTCAAAATCCTCCTTACAGCGTCGTTGATTCGGTACATCGGAACAGCCTTGCTGTTGACAAGGTAGGTAAGGCCATCGATGAACTCCTTGTAATTTGTAGGAACCATAAACTGAAACACGACAGTAAAACTAGTTTTGTAAGATCTAAGATGCCATGTTCATTGAGATTGCCTATGTTGTTGATAACCTTACCATGTCTATTCCTGCTTGAACGCCTGATAGGATCGAGAATGTGTAATTTGAATGAGCTGGGTCTGTGATCCTATCATTCATGAAGATTTAGTGTAATACATACCCTGAATTTGAGTGTTCTTAAGGAACTCAGTGATGAGTTCATGATTTGAATGCATCTTCTTACCGTTCCAACTGGAGTAGGAAACCATTATTGTAGAGACACCCTTGATTATGGAGTGATAGTACCCTGGCATGTGAATGCTCAACAGTCCATGCCTGCTGAACACAGTGTTGTTCTCATTGATACCCCTTGTTGTGCCGCCATCGCCAACAAAATGCTTTGCACAAGCTGCAACCTTGTCTCTGTTATGAGGCCAAGAAGTTTTTCAATTAGGTTCCTTGAAATGGATAAACCTCCTAATCTCTAGTGGTTGAAAAGTTACCTTCCACCAACATAAGGAACTCCTTTTGAAAACCCAGATGGGATTTGTCCTTGCAGCCCAATTATGATATCTGTCATTTCTTTGACAATGTCGGGATCTTCGCTGTAGCTTTCGTAACACCTTCCCCATCTAGGATCTCTACAGACCTGAGATGAAAATGTTCATAGTTCTGCTTGAATCAAACAGGGTTTAATGTGGGAATTGTTAGACAAAGACTCTCCACTATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTAGGGTTCCCCAAAAGGCCTCGAACCAATGGAGAGTATATTCTTAGATTATAAACCCATGACCATTCCCTAACTTAACCAATGTGGGACACTTTCATCTAACACCTCCCCTCGAACAAAGTACGCCCTCCCCTTAAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTGACTGCCTTCGTACCTTCGAGGAGGCTTGACTCCTTTTGGAGTCCTTTGTTCGACATTCGAGGATTTACCAATCTATTGGCACGGCTAAGTTTAGGGCATGGCTCTGATACCATGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTAGGGTTCCCCAAAAGGCCTCGAACCAATGGAGAGTATATTCTTAGATTATAAACCCATGACCATTCCCTAACTTAACCAATGTGGGACACTTTCATCTAACACCTCCCCTCGAACAAAGTACGCCCTCCCCTTAAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTGACTGCCTTCGTACCTTCGAGGAGGCTTAACTCCTTTTTTTCTTTTTGGAGTCCTTTGTTCGACATTCGAGGATTTACCAATCTATTGGCACGGCTAAGTTTAGGGCATGGCTCTGATACCATGTTAGATGAACACCACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTAGGGTTCCCCAAAAGGCCTCGAACCAATGGAGAGTATATTCTTAGATTATAAACCCATGACCATTCCCTAACTTAACCAATGTGGGACACTTTCATCTAACACCTCCCCTCGAACAAAGTACGCCCTCCCCTTAAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTGACTGCCTTCGTACCTTCGAGGAGGCTTAACTCCTTTTTTTCTTTTTGGAGTCCTTTGTTCGACATTCGAGGATTTACCAATCTATTGGCACGGCTAAGTTTAGGGCATGGCTCTGATACCATGTTAGATGAACACCACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTAGGGTTCCCCAAAAGGCCTCGAACCAATGGAGAGTATATTCTTAGATTATAAACCCATGACCATTCCCTAACTTAACCAATGTAGGACACTTTCATCTAACAGGAATGTGGTAAAAGGGGGGAATGATTTCAAGAAGACATACTGCTATGCATGGAGCAAAGACATAATCGATCCCGGTTGCTCGAACTTCTCTAGCAGTAGCAGCACCAATTCTCCTTAGAAGTTCAGGTTCCCTGTCATATAAGAAAACTATTTAGCCACCAGTAATTCTGTGCCGGTGCACGACAGGTTCGAATCCTCCATCCAAATATTATCACCTGGTTGCGCCGAGACCAACATTGTGGGGGAAAGACTGTGGCATTGTAGACAATGCCATGACCATGGACGGCATCAATTCCATACATTATTGGAATGCCAAGCCTACTTGATAGTGAGCCCTGTTGGAATGAATTCACCATGTCAATCCACACCTGTGCAGTAGCCTGTAGAGATGGGGCACTATCTCCGCCGCTAAGCACGCTGCCAATGGAGTAATCTCTAACGATCTCCGGTGTGACGCCAGAGCGATCCAACTGGGTCATCTGCCCAATCTTCTCTGCTAAAGTCATTCTATCCATTAGGTCCTTGATTCAGACGTTTAGTGGCTGTGCCGGGTCCTTGTACTTGAGATGGTCTTCATGAGCAGCTGCCAAAGCCGGCCAGCCACAGAGTAAAAGTACCAGGATTGAGGCTACTGTCACCTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATTCCAATGGAGAGTGTTTTGCTTTGGGCTTCCCCAAAAGGCCTCATTCCAATGGAGAGTGTATTCTTAGATTATAAACCCATGACCATTCCCTAAATTAACCGATGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGCACGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTGACTGCCTTCGTACCTTCGAGGAGGCTTGACTCCTTTTGGAGTCCTTTGTTCGACATTTAAGGATTTGCCAATCTATTGACACGGCTAAGTTTAGGGCATGGCTCTGATACCATGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCCTAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATTCCAATGGAGAGTGTATTCTTAGATTATAAACCCATGACCATTCCCTAAATTAACCGATGTGGGACTTTCATCATCCAACATCACCTTCATCATCTTCCTGGTGAGCAAAACTTAACAGGACTTTGAATTTTGTTATATCGTTAGGTTGGTTACGCCTCTTTTTATAGTCAGTTTGGTAGTCCCTGAATATCTCTTTCCTCCTCCGTTTGAAGCGGCGGCCTCCAACGGCTTTTAAAAAACTGACTTTCAATTTCTTATCTATGCTTTATATTCTTGGAAAAATATTTAAGTCTTGATTTTACTTCTTTGTTCAGGATTTTAATGAAATTTCAATTTTGGTGTTTAATAGGTCGTGTTCTATTTATCATTTTATTTTAAAATTTATATATCTAAGATACAAAAAAAATCAAAAGTTTAGTGTTCTATTAGATATAAATCATTTGATTCTAAATCTAATAAAATAAATTGGTCTCTTTTTAAAAAATGAATTTGTTTAAATTTTTATAAGACGGTGATTTATTAAACTAGAGAGTTATATTCCTTAACTGTGCTTATTTATTTTGCTTCGTTTAGTGCCATTTTTTAGTATAATAATTGAAGTATAGAGATTCTTTCGCAACGTAGGGTGAGTCATGGTCTAATATCAAGTCGTCATGGCCTAATATCAAGTCGTCATGGCCTAATATCAAGTCAAAAGGTGTGTGGCCATCGGTTTGAGCTGCCTGCAACTTTTTCATTTTGGCCATGATTAGCACCATTTGTGAAGAAATTATAATTCCAAGACTTAATCCCTTATTAGAAGATTGAAAAAGAAGAATTAGAAGGTTACAGAATTTCACTTGTTTCATGCTCTGTACTAAACAAACACTAACTTACAGCCGTTGTAATGTTCAAACAACACTGGGAGAATAATTGAGCTACAAACTGAAACATACTGCCCATGTTTGTGGTGCGTTCTGTTGAAACTCGTACCCTGCATTTGAGGAAACCGAACTACGAACATAAACGACGACATACATTCTTGTGTTTGATTTATTGATCTTACCGGAGTTTGATGCTCATACTGTTTGGTTAGCTGGTAACCGTTTAGCGGAGAGATAAGCGAGAATGATGCATAATAGGCTGAAAAGTAAGACAATCTAGATCGAAACAACAAAAACATCATCAGATATTCTTACACTACAACGATATCGTTTTTGATGTGATCGAGTAATAGAAACTCACCGCAGCTGGATTGCACATGGGCTCACTTCTTACTGCATACAATTCCCTGGTGAACAATAACACGATGGAATGTTTCAGAGTGCTCAGAGGATTTAAAGGGTGAAAGATAGGTAAGAAATCGACCGAGGACGAAAAATACGAACCTCTTGTTCAAGAGCCCCGACTGCTTGCATGTTTTCTGTATTGCCTCAATCCTGCTCAGGGTTTTAGAAGCATTAGGATAACTGCTGTTGACCTGTAGAACCAAGGAAGTTAGTTTCATTAAAAAAAACGTTAGATGATGCGATATTTATGCAGAAAAACGATATACAGTCACCGAGCAATCACCGAGACTGACAGGAAGATTTCTACCTTAGCCTCCAGCATAACAGAAAAATCAAAGAAAGCTCCATAGACATCAGCCATCGTTTTCGTTCGATAAATGACCTTTGCAGTAAGACCTGTAGAACGGACACCATAAAAATTCCAGCTATGGGTCGATTACATGAAGGCTAGCTCCCTTTTTGGGATTTGTACAAAATGAAACAGTCAATGGAAATCGTACCCCGACGCATTTTGACGACCCCTCTAAAGACATCGACATTGTTGTAGCATAATGCTAGAGTTCCAATTGCCATAATCTATCATAACATGAAATAGATGTCCAAATACTGTTCTTGGCATGAAAGAGATGAACACAGCAGCATTCATTTCATACCTGAGGGATCGCACAAAATCGAAATATTGAAAGATCTTTCAAGTTAGACATGTATTCTAGACAATCCTCCACATGGGTCAATGCATTGGTGACCAAATCATTGAGGCATTGCACGGCCTTGACTGAATTCTCCTCATATTTAAAATCCTGTAATGCAGAAAAGAGTGGAACGAGCCAATAAGACAAGAAGACGACGAAGAACACGAAAGAAGAAACCAAAAGGCGGCAGAAGGTATATAGACTTGTGCACCTCTAATTTATCAGCATATTTGCTCCAAATCTCACGAGGCCAAAACATCCTAGACTTTGGTATCTCATTGATATCCTCCAAGTAATCTCGAATAATATTCGTTTTCTGTGTTATAATAGTTCGAAAAAGAGTACATCAGAGTCAAACTTCAACACCAATTAATGAATTGTTCGAAAGCACAATGATCGTTTCAATTATAATAGCTGACCTGAAGAAACAATCCCATAGAATTTGAAAGAGAATCGGGTGCCAAATCCTCTGACTTCGAAGCGTGGAACAGCTTGGATAAACCTAGTCCGACAAGTCCAGCTACGTAGTGACAATATTCATCATAATCTTCAACTGTCTCTACCTACAAGAAGAGAAGAGAAGAAATGTTTCAGTTCTCCGATCAATGCATTACTTCAGCTACGTTCCTTACTAACCATTACTAATATATTACTCTATTGGGTGGGAAGGAAAAAGAAAATGTGAGTTCTCACGTCGGTTGGGGAGGAGAACGAAGTATTGTTTATAAGGGTGTGGAAACCTATCGCATTTTAAAAACCTTGAGGAAAAGTCCAAAGAGGACAATATTTGCTAGCGATGGGCTTGGACTGTTACAAATGGTATCAGAGTCAAACACCGAGCAATGTGGCAGCGAGGAGATTAAACCCAGAAGGGGGGTGGACACGAGTCGGTGTGCCAGCAAGGACGCTGAGACTCGAAGGAATGGATTGGGGGGTCCCACATCAATTGGAGAAGGGAACGAGTGCTAGCGAGGACGTTTGGCCCCGGAGAGGGGTGAACTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAACATTCTTTACAAGGGTGTGGAAACCTCTCCCTAGCAAACGCGTTTTAAAAACCTTGAGGGGAACTCCGGAAGAAAAATTTTAAAAAAAAATTTAAAAAGATAATATCTACTAATGGTGGACTTGGGCTATTACACGTAGGTACGAAAACCATTGTGTCAAATATACTAAATATGCAAATGCAAGACACTTGTTGTACCTCTTTGCAAATGAATTTGGCCATTCCTGCGCCCATCCGTTTCGTGATATCCTCAATTGCTTCCTGGTACCTGCAAAATCAATTCAGCACAGTTAGCTAAGCACGGAAGAACTTTTGATCAGAATTAGATGTTCTATGCAAAAGCTTTTCTGATGTTCCATTTTAAAAACTTTGAGCCTTTTTATTTGATACCAAAAATGAAAAGGTTACTCTTGACTTGGACAAGTTGTTGATCTAATCTCTTGTAGTTCTATTTTTTGTAGTCATAAAAGCTTGTTCCTTTTGAAAACAATAACAGAAGTAATTGCAAGGATGCAGTAAAATAAAATAAAATAAAAAAGAACATCGAGTGGGTAACAACTCAAGCCTACCGCTAGCAGATATTGTCTTCTTTAGACTTTCCCTTCTGAGCTTCCCCTCAAGGTTTTTAAAACGCATCCGCTAGGGAGAGATTTCTACATTCTTATAAAAAATACTTCGTTCTCCTCCCAACCGATGTGGGACCTCACAATCCACCCCCACCCCCCCTTTCTGGGCCCAACGTCCTCGTTGGCACATCGCACGGTGTCTGGCACTGATACCATTTGTAACAGTCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGACTTTCCCTTCCAAACTTCCCCTCCAGGTTTTTAAAATGTATCTGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCTTCTCCAGCCGATGTGGAATCTCACAACCATCCACCCTTAACCAGTTGTTGTAGTTCATTAAAAGGATAGAATCCAATGAATAAATCTATCACTACACTTATAGAAGGAAACAGGTCTTGATCAATAATTAGTTGTCTTTTTCATAAAGCATCAGGCAGGAATTAGTAGGTTCTAGTAGTAACCAACCCTCTCCCGAGTTCTAG

mRNA sequence

ATGATCTCCGAACAGTACGTCGGCGACGCCCTCGCACTCTGTTCCCGGCAGCCATGCTGCCACCAGCGCGTCCAACTGCGACATGTACGGATGAATCGTCAGGGGTCGGCCGGAGACGAGGACAACGACGCACTTGACGACGTTGCACACGTGCTGGATCGTGTCCAAGCCTCCTTCAGGGATAGTCAGGTTCAGGTTGTCGCCATTGGTCTCGGCGTACGGCGGTTCTCCTACCACGACAATGGCGTACGTGAAGTTGTTCGCCTTCACGTAATCGGCCGTCGGACTTACGTCGTGTACAACCTCCGTGTTTGGATCGACGCTTTTCTTCACCGCCTCGAGGATGGTGGTTCCGGTTGTGAGATTGTCGCCGCTGATTCCTTTCCATTTGATCGTCCAACCGCCGCACTGATCTTCGGTGCCTTCTTCGACAGAGGAAGAACTGGATCATCTGCATTTTCGCCGTTCTTCAATAGAACAAGTGATTTCCTCACTGCTTCTCTTGCCAAATCTCTGTCAATTAACCTGGCTTCCAAGCTCATTTACAAATCTGTCATCGGCCAATGGATTCTCAAACAGCCCCATTACGAACTTGACTCTCAAAATCCTCCTTACAGCGTCGTTGATTCGGTACATCGGAACAGCCTTGCTGTTGACAAGAGATGGGGCACTATCTCCGCCGCTAAGCACGCTGCCAATGGAGTAATCTCTAACGATCTCCGTATAGAGATTCTTTCGCAACGTAGGGTGAGTCATGGTCTAATATCAAGTCGTCATGGCCTAATATCAAGTCGTCATGGCCTAATATCAAGTCAAAAGAAACTCACCGCAGCTGGATTGCACATGGGCTCACTTCTTACTGCATACAATTCCCTGAAAAGAGTGGAACGAGCCAATAAGACAAGAAGACGACGAAGAACACGAAAGAAGAAACCAAAAGGCGGCAGAAGGCAGGAATTAGTAGGTTCTAGTAGTAACCAACCCTCTCCCGAGTTCTAG

Coding sequence (CDS)

ATGATCTCCGAACAGTACGTCGGCGACGCCCTCGCACTCTGTTCCCGGCAGCCATGCTGCCACCAGCGCGTCCAACTGCGACATGTACGGATGAATCGTCAGGGGTCGGCCGGAGACGAGGACAACGACGCACTTGACGACGTTGCACACGTGCTGGATCGTGTCCAAGCCTCCTTCAGGGATAGTCAGGTTCAGGTTGTCGCCATTGGTCTCGGCGTACGGCGGTTCTCCTACCACGACAATGGCGTACGTGAAGTTGTTCGCCTTCACGTAATCGGCCGTCGGACTTACGTCGTGTACAACCTCCGTGTTTGGATCGACGCTTTTCTTCACCGCCTCGAGGATGGTGGTTCCGGTTGTGAGATTGTCGCCGCTGATTCCTTTCCATTTGATCGTCCAACCGCCGCACTGATCTTCGGTGCCTTCTTCGACAGAGGAAGAACTGGATCATCTGCATTTTCGCCGTTCTTCAATAGAACAAGTGATTTCCTCACTGCTTCTCTTGCCAAATCTCTGTCAATTAACCTGGCTTCCAAGCTCATTTACAAATCTGTCATCGGCCAATGGATTCTCAAACAGCCCCATTACGAACTTGACTCTCAAAATCCTCCTTACAGCGTCGTTGATTCGGTACATCGGAACAGCCTTGCTGTTGACAAGAGATGGGGCACTATCTCCGCCGCTAAGCACGCTGCCAATGGAGTAATCTCTAACGATCTCCGTATAGAGATTCTTTCGCAACGTAGGGTGAGTCATGGTCTAATATCAAGTCGTCATGGCCTAATATCAAGTCGTCATGGCCTAATATCAAGTCAAAAGAAACTCACCGCAGCTGGATTGCACATGGGCTCACTTCTTACTGCATACAATTCCCTGAAAAGAGTGGAACGAGCCAATAAGACAAGAAGACGACGAAGAACACGAAAGAAGAAACCAAAAGGCGGCAGAAGGCAGGAATTAGTAGGTTCTAGTAGTAACCAACCCTCTCCCGAGTTCTAG

Protein sequence

MISEQYVGDALALCSRQPCCHQRVQLRHVRMNRQGSAGDEDNDALDDVAHVLDRVQASFRDSQVQVVAIGLGVRRFSYHDNGVREVVRLHVIGRRTYVVYNLRVWIDAFLHRLEDGGSGCEIVAADSFPFDRPTAALIFGAFFDRGRTGSSAFSPFFNRTSDFLTASLAKSLSINLASKLIYKSVIGQWILKQPHYELDSQNPPYSVVDSVHRNSLAVDKRWGTISAAKHAANGVISNDLRIEILSQRRVSHGLISSRHGLISSRHGLISSQKKLTAAGLHMGSLLTAYNSLKRVERANKTRRRRRTRKKKPKGGRRQELVGSSSNQPSPEF

Homology

[Close]

BLAST of CmaCh20G008130 vs. TrEMBL
Match: A0A0P0W314_ORYSJ (Os03g0749200 protein OS=Oryza sativa subsp. japonica GN=Os03g0749200 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.4e-10
Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 1


Query: 1   MISEQYVGDALALCSRQPCCHQRVQLRHVRMNRQGSAGDEDNDALDDVAHVLDRVQASFR 60
           +I EQ+VGDA+AL + +P   +RV    VR++ + + GDE + ALD+ AHVLD ++   R
Sbjct: 26  VIPEQHVGDAVALRAGEPGGDERVHGADVRLHHERTPGDEHHHALDEPAHVLDHLRPRRR 85

Query: 61  DSQVQVVAIGLGVRRFSYHDNGVREVVRLHVIGRRTYV----VYNLRVWIDAFLHRLED 116
           D QVQVV + L VR   +H +  R VV L  +G R  V    V + R  +   L RL+D
Sbjct: 86  DGQVQVVPLRLRVRLLPHHHH--RVVVLLGALGDRALVRVLRVVDHRALVHRRLDRLQD 142

[Close]

BLAST of CmaCh20G008130 vs. TrEMBL
Match: A0A0A0LM31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G251480 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-07
Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 1


Query: 123 VAADSFPFDRPTAALIFGAF-----FDRGRTGSSAFSPFFNRTSDFLTAS---LAKSLSI 182
           ++A+S P D P AA  +  F          T    F   F  +S     S   L  +L  
Sbjct: 24  LSAESLPGDCPAAADCWREFRLLRSMVLSLTEEELFHQHFRNSSIEQVISSLLLLPNLPT 83

Query: 183 NLASKLIYKSVIGQWILKQPHYELDSQNPPYS-VVDSVHRNSLAVDK 221
           NLASKLIYKSV  QWILKQ H++LDSQNP +  VVDS H+N++  DK
Sbjct: 84  NLASKLIYKSVTRQWILKQAHHKLDSQNPSHGVVVDSGHQNNVLNDK 130

[Close]

BLAST of CmaCh20G008130 vs. NCBI nr
Match: gi|937911471|dbj|BAS86391.1| (Os03g0749200 [Oryza sativa Japonica Group])

HSP 1 Score: 74.7 bits (182), Expect = 3.4e-10
Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 1


Query: 1   MISEQYVGDALALCSRQPCCHQRVQLRHVRMNRQGSAGDEDNDALDDVAHVLDRVQASFR 60
           +I EQ+VGDA+AL + +P   +RV    VR++ + + GDE + ALD+ AHVLD ++   R
Sbjct: 26  VIPEQHVGDAVALRAGEPGGDERVHGADVRLHHERTPGDEHHHALDEPAHVLDHLRPRRR 85

Query: 61  DSQVQVVAIGLGVRRFSYHDNGVREVVRLHVIGRRTYV----VYNLRVWIDAFLHRLED 116
           D QVQVV + L VR   +H +  R VV L  +G R  V    V + R  +   L RL+D
Sbjct: 86  DGQVQVVPLRLRVRLLPHHHH--RVVVLLGALGDRALVRVLRVVDHRALVHRRLDRLQD 142

[Close]

BLAST of CmaCh20G008130 vs. NCBI nr
Match: gi|700206728|gb|KGN61847.1| (hypothetical protein Csa_2G251480 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-07
Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 1


Query: 123 VAADSFPFDRPTAALIFGAF-----FDRGRTGSSAFSPFFNRTSDFLTAS---LAKSLSI 182
           ++A+S P D P AA  +  F          T    F   F  +S     S   L  +L  
Sbjct: 24  LSAESLPGDCPAAADCWREFRLLRSMVLSLTEEELFHQHFRNSSIEQVISSLLLLPNLPT 83

Query: 183 NLASKLIYKSVIGQWILKQPHYELDSQNPPYS-VVDSVHRNSLAVDK 221
           NLASKLIYKSV  QWILKQ H++LDSQNP +  VVDS H+N++  DK
Sbjct: 84  NLASKLIYKSVTRQWILKQAHHKLDSQNPSHGVVVDSGHQNNVLNDK 130

The following BLAST results are available for this feature:

BLAST of CmaCh20G008130 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh20G008130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0P0W314_ORYSJ	2.4e-10	41.18	Os03g0749200 protein OS=Oryza sativa subsp. japonica GN=Os03g0749200 PE=4 SV=1	[more]
A0A0A0LM31_CUCSA	1.1e-07	43.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G251480 PE=4 SV=1	[more]

BLAST of CmaCh20G008130 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh20G008130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|937911471\|dbj\|BAS86391.1\|	3.4e-10	41.18	Os03g0749200 [Oryza sativa Japonica Group]	[more]
gi\|700206728\|gb\|KGN61847.1\|	1.6e-07	43.93	hypothetical protein Csa_2G251480 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G008130.1	CmaCh20G008130.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G008130	CmoCh20G008210	Cucurbita moschata (Rifu)	cmacmoB551
CmaCh20G008130	Cp4.1LG16g02830	Cucurbita pepo (Zucchini)	cmacpeB565
CmaCh20G008130	MELO3C034621.2	Melon (DHL92) v3.6.1	cmamedB580
CmaCh20G008130	CsGy2G012740	Cucumber (Gy14) v2	cgybcmaB218

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G008130	Cucumber (Chinese Long) v3	cmacucB0651
CmaCh20G008130	Watermelon (97103) v2	cmawmbB567
CmaCh20G008130	Watermelon (97103) v2	cmawmbB570
CmaCh20G008130	Wax gourd	cmawgoB0677
CmaCh20G008130	Wax gourd	cmawgoB0684
CmaCh20G008130	Cucurbita maxima (Rimu)	cmacmaB469
CmaCh20G008130	Cucurbita maxima (Rimu)	cmacmaB444
CmaCh20G008130	Cucumber (Gy14) v1	cgycmaB0253
CmaCh20G008130	Cucurbita moschata (Rifu)	cmacmoB548
CmaCh20G008130	Cucurbita moschata (Rifu)	cmacmoB554
CmaCh20G008130	Wild cucumber (PI 183967)	cmacpiB547
CmaCh20G008130	Wild cucumber (PI 183967)	cmacpiB580
CmaCh20G008130	Cucumber (Chinese Long) v2	cmacuB542
CmaCh20G008130	Melon (DHL92) v3.5.1	cmameB503
CmaCh20G008130	Watermelon (Charleston Gray)	cmawcgB477
CmaCh20G008130	Watermelon (97103) v1	cmawmB526
CmaCh20G008130	Watermelon (97103) v1	cmawmB544
CmaCh20G008130	Cucurbita pepo (Zucchini)	cmacpeB570
CmaCh20G008130	Cucurbita pepo (Zucchini)	cmacpeB585
CmaCh20G008130	Bottle gourd (USVL1VR-Ls)	cmalsiB507
CmaCh20G008130	Bottle gourd (USVL1VR-Ls)	cmalsiB514
CmaCh20G008130	Cucumber (Gy14) v2	cgybcmaB956
CmaCh20G008130	Silver-seed gourd	carcmaB0441
CmaCh20G008130	Silver-seed gourd	carcmaB0599