CmaCh20G008100 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G008100
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionAltered inheritance of mitochondria 23, mitochondrial
LocationCma_Chr20 : 3812638 .. 3816980 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTTGCTATAGAGAGGGTTCGCGGGTGAATCCTTCCCTTCCCACCTGTAATTGTATCGTGTTCGGGTTCATGTTCGTAGCCAGAGAGAGTTGTCAAGAACTTGGAGATGGATGAATCAGACGGAGGTCAAAATCCAGCGCCTAACCTTACCTCTAATGGCGCCAAAGATTCGAAGGGCAAGTCCTGTAAGGGCTGTCTCTATTACTCTTCACTTCAGAAATCCAAATCCAAAACGCCCACCTGCATTGGATTGTCCAAAACTCTCGAGCAAGGTACCTCTCTCGCATTCTTTTGTTCAGATTCCATTTGATTAGCGATTACCATGAAATGCACGATATCGGTAATTAGTTCAGATGCTTTTAGATTCGTTAATTTGTTGTATTCAATTTCATTTTTGATCTTCTGGGTGTTTATCTTTTTTTGATTGCCATTTTGGGTTCTGCAATGGCCGTCTCTTGAAATTCAATGGTCACCGACTCACCGGTGTTTGGTCTTTTCCGTATGATTATGGCGGTTGTGCATAGTGTTTGAAGGCTGTCTTGACTTTCTTTGATCTGATATTCCCGTAGAAAAAGCGAGTGTATAGATTTTATCGAACAAGTGAAGGGCATTTCTTTGTTGTTCCTTCCTGGCCATGGAGACCAAAGGAACATCTTAAATGGAAGTCAATTGATTTCATGAATGGATGACCCTTCATAATTGTAGTAAGGAGATTGTTGGTGTCCATGGGGAGCTTAAACACCATGTCCCACAAGGTCTTGGGCGTGGTGGCTCAATGATAAAAGGCCTTTTGGGTTAAGCCGCCATAACCACATATCTTGATGTAGACGCGTGAAGGAAAAGACAAACAGACAGTAGAGATAATTTTGGGAACATTATTCTTAGGAGTAGGGACCTTACGGGATCGAAATGAAAACTGGACTACCCTTGCAGAGGAATGGCTAAGCATGGTTAGTACTATAAGTATAAGAAAAGACAAGACTATTAGCTGAATGAAGAATATAGAATGAGCTTCATTAGTTTCATTTAGAAGTTACAAGTATGAGAGAAAGTAGGAGTCCTCACAAAAGACGATTTCTCGGTAAGTGTTTGGGGATCAGTAGAATGAGCTACATTAATTTCACTTAGAAGTTAGAAGCATGAGAGAAATTAGGAGTACTCGCAAAAGACGATTTCTTGAAAGTGTTTCCGGTGTCTATAGCATATCTGGGTAAGGATAATTTTGTGTTTACAGTTGATGGTAGGGATGGAATATTGGTGTCCGAACTATGGTGTAGGACTGTGCTGGTTAAAAAGAAACCAGAGGTTGTTTGAAGATAAATCCTCTACTTTTGAGTCCTTTTGTAGCTGTCTGCCTCTTGTGGTGTCACAAAAATAGCAAATTCTCTTGTAATTCTCTTTTATTAGTAGTATTATTATTATTATCTTACAAACTAGAGCAAGAAAGAGCGGAATCTCTGTAGATCATGGAAAATTTCTTTTGTACTTATCGAGTGTAGTTGATCACTAACAATTAGAAAATCTTATGTGAAATTAGCTTCCCTGGGAGGGAGATGCCACTTCCCCTACATTTAGGTTGTGAGATCCCACATCAGTTGGAGAGAAGAATGAAGCATTCCTTATAAGGGCGTGGAAATCTCTCCTTAACAGTTGCGTTTTAAAATCTTGAGGGGAAGTTCGAAAGGGAAAACCCAAAGAGGATCATATCTACTAGCGGTGGGCTTAGGCTGTTACAAAGGTATCAAAGCCAGACACGGAGCGGTGTGCCAATGGGAACGCTGACCCCCGAGGGCGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAACATTTCTTATAAGGGTGTGAAAACCTCTCCCTAACATACGCGTTTTAAAACCTTAAGGGGAAGTCCAAAAGAGAAAGCTCACAGAGGACAATATTTGCTAGCAGTGGGCTTGGGCTATTACAAATGGTATCAGAGCTAGGCACTGGGCGGTGTGCCAGCGGGGACCCTTGGACCCCAAGGGCGGTGGATTGTGAGAACCCACGTCTATTGGAGAGGGGAACGAAGCATTCCTTACAAGGGTGTGGAAACCTTTCCCTAATAGATGCATTTTAAAAAATGGTTTTAAGACTTCTTACCATTGAAACTTCACTTTGTTCACATTGTAGTGCAATTACTTGTGTCCCTTGCCTCATTCACCTTGATCACTTTTTAAAATATTCGTGGATTGAAGTTTGGTTTCCTTCAATATTTAGTAGTTCTCAACTACAAATAACATTAACATTTCATGATATCTATAGTAACATTGATTTTTATAAGCAGTACCCAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGCAGTCTTGCAGACTTCAAATATGCTTGTGTTGGTTACTCTGTCCACTTAGAAAAGAAAGATTCACCAAATGATGTGCAGAACAAACAGGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTTTGTAATATCTCAACTTTTCTATGAGATGCAAAAAATATTAAAATAGCATCATTTCCTTTCATGCTAAATTAACAAAAAAAAAAAAAAAGTTTTAAAATACCCTTATTGTTAGTATATTGAAACGGTTAGTACTTTGTTTCCGAATACTACTTTAGAAGTTTAACTTTCAAAAGTAGCAGTTATTATCCTCAGTAGTATATGGTCAAAACCGTTTATCTACATCCCATAGACTACCTCCCTCTTTAATTTCCTCTCTCCTATGATTCAAAGGTATTTGTGAAACACTTCAGTTCAGATAGTTTAAGTGTATAAATGCTCTAATGTTAGTAGGTAAACATTAAAATGCTGTTTTAAGCTGAGTTCTTAATCTTATGAATGTGATCTTGTCAATAACATATGCTTGTTAGGTATTGTTGGACAAAAGGCCAGCGGAACATTCCCAAGCTCATGTTCATGATAAAACTGAAGGTACTACAAGTTACCATATCATAACTTTTCGAGTACTAATATCTCTCAGTTTTTAGATAGATATCAGGTGAGGGCGTTCGAGATGTGGCTAGGTTTAATGCCTACTTGCGAGTGTTAGTTACTAGACGTGACCTTTCTGTAATTCTGAGTTCGCTCTTATTCATTTGAATCGAAGTCCTTATCGTTGTTAGAGTCAGACTCCTTTCATTGGGGCTTGTTTTTTTCGTATGTGCCTGTATATTCTTTCGATTCCCTTTGATCGAATTTAGCGTGAATCCTCGTCTAGATCTTCCTATAGGTTTTAGAGATATCGGGTGAAGGGGTTTTTGAGAGGTGGCTTACGCCTACTTGCGGGTGTTAGTCACTAGACGTGTGAGATCTCACATTGGTTGAAGAGGAGAACGAGACATTCTTTATAAAGGTGTGGAAACCTCTCCTAGCAGACTGTGTTTTAAAAACCTTAAGGGAAAATCCGAAAGGGAAATCCCCAAAAGGACAATATCTATTAGCGGTGGACTTGGGTTGTTACAAGATGTGACCTTTTTGTAATTATGAGTTTGCTCCTAGTCGTTTGAATTGAAATCCTCATCATGGTTAGAGTAGACTCCTTTCATTGGGGCTTGTTTTTTCGTATGTTTTTGTATATTCTTTCAATTCCCTTTGCTGGAAGTTAGTGTGAATCCTCGTCTAGATCTTCGTATATTCTTTCATTATATAAAATCCGATTCCGAGATCGTCGAACCCTTCATCCCATGTCATAGAGATACTAATCTTCAAGTTTGGTCTTGATATTCAACAGATAGCCCTGCCTTTCCACAGCCACGCAACTATAAACCGTCCTATGCAGCTGGAGACGAGTACCTAAACAGGCAAGAACTTCTTGACACACTTTTATCTTTTCACTGCTAAGCATGAATGTCACATAATCTTAATACCCAAAGAGTGCAACGCTCAGGTTTACACGAAATGCAGTCCTTGTCGCATCAGGCGTAGCGAGGAACATGAACAAAGTTTGCATCTACATAAAAGAAAGCTTCGACGATATTTTACACCCTTACCGAAGACGACCAAAATGATGTACGTCCATGAACTGCTAGAATAAAGATCAGTCATCACAGTAAATAGGTATGTTGCAGAACGCCGACAACGCCCGATCATACGTAATATTGATCAAATTCACGTCCTTATAACTGTGTAAAGATGACGTCAAGGGAGCACGTCGTCTTTACGTGGCTGTAATAAATAATGTAACGAATTTAAATTCTTATGAGTGTTCAAGCCATTGATTGAAACCTCGAGATAGAAAATTTTGAATTACATAACTTTTTAGAAATTGAATGAAAGATATCTAATATGTGTGGTTGTGATGGAGCATATGAAATGCC

mRNA sequence

TATTTGCTATAGAGAGGGTTCGCGGGTGAATCCTTCCCTTCCCACCTGTAATTGTATCGTGTTCGGGTTCATGTTCGTAGCCAGAGAGAGTTGTCAAGAACTTGGAGATGGATGAATCAGACGGAGGTCAAAATCCAGCGCCTAACCTTACCTCTAATGGCGCCAAAGATTCGAAGGGCAAGTCCTGTAAGGGCTGTCTCTATTACTCTTCACTTCAGAAATCCAAATCCAAAACGCCCACCTGCATTGGATTGTCCAAAACTCTCGAGCAAGTACCCAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGCAGTCTTGCAGACTTCAAATATGCTTGTGTTGGTTACTCTGTCCACTTAGAAAAGAAAGATTCACCAAATGATGTGCAGAACAAACAGGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTATTGTTGGACAAAAGGCCAGCGGAACATTCCCAAGCTCATGTTCATGATAAAACTGAAGATAGCCCTGCCTTTCCACAGCCACGCAACTATAAACCGTCCTATGCAGCTGGAGACGAGTTTACACGAAATGCAGTCCTTGTCGCATCAGGCGTAGCGAGGAACATGAACAAAGTTTGCATCTACATAAAAGAAAGCTTCGACGATATTTTACACCCTTACCGAAGACGACCAAAATGATGTACGTCCATGAACTGCTAGAATAAAGATCAGTCATCACAGTAAATAGGTATGTTGCAGAACGCCGACAACGCCCGATCATACGTAATATTGATCAAATTCACGTCCTTATAACTGTGTAAAGATGACGTCAAGGGAGCACGTCGTCTTTACGTGGCTGTAATAAATAATGTAACGAATTTAAATTCTTATGAGTGTTCAAGCCATTGATTGAAACCTCGAGATAGAAAATTTTGAATTACATAACTTTTTAGAAATTGAATGAAAGATATCTAATATGTGTGGTTGTGATGGAGCATATGAAATGCC

Coding sequence (CDS)

ATGGATGAATCAGACGGAGGTCAAAATCCAGCGCCTAACCTTACCTCTAATGGCGCCAAAGATTCGAAGGGCAAGTCCTGTAAGGGCTGTCTCTATTACTCTTCACTTCAGAAATCCAAATCCAAAACGCCCACCTGCATTGGATTGTCCAAAACTCTCGAGCAAGTACCCAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGCAGTCTTGCAGACTTCAAATATGCTTGTGTTGGTTACTCTGTCCACTTAGAAAAGAAAGATTCACCAAATGATGTGCAGAACAAACAGGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTATTGTTGGACAAAAGGCCAGCGGAACATTCCCAAGCTCATGTTCATGATAAAACTGAAGATAGCCCTGCCTTTCCACAGCCACGCAACTATAAACCGTCCTATGCAGCTGGAGACGAGTTTACACGAAATGCAGTCCTTGTCGCATCAGGCGTAGCGAGGAACATGAACAAAGTTTGCATCTACATAAAAGAAAGCTTCGACGATATTTTACACCCTTACCGAAGACGACCAAAATGA

Protein sequence

MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEFTRNAVLVASGVARNMNKVCIYIKESFDDILHPYRRRPK
Homology
[Close]
BLAST of CmaCh20G008100 vs. TrEMBL
Match: A0A0A0LIW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G251500 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.1e-92
Identity = 171/195 (87.69%), Postives = 181/195 (92.82%), Query Frame = 1 

Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYI 60
           MDESDG QN APNLTSNG KDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTL+QVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGVKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSL DFKYACVGYSV+LEKKDS NDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNMNKVCIYIK 180
           E+SQAH+H+KTEDSPAFPQPR+YKPSY AGDE    F RNA LVASGVARN+N+VC Y+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFDDILHPYRRRPK 192
           ES DDIL+PYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]
BLAST of CmaCh20G008100 vs. TrEMBL
Match: M5W4M3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011664mg PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.9e-65
Identity = 135/200 (67.50%), Postives = 160/200 (80.00%), Query Frame = 1 

Query: 2   DESDGG----QNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVP 61
           +++DGG     NP PNL SNG+  +KGKSCKGCLYYSS QKSKSK PTC+GLSKTL+QVP
Sbjct: 6   EDADGGGIKIPNPNPNL-SNGS--AKGKSCKGCLYYSSTQKSKSKYPTCVGLSKTLQQVP 65

Query: 62  NYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDK 121
           +YIVGETELEASK  RSL DFKYACVGYSV L++KDS +D QNKQAELPFCVGLEVL DK
Sbjct: 66  SYIVGETELEASKADRSLTDFKYACVGYSVFLDRKDSSSDQQNKQAELPFCVGLEVLYDK 125

Query: 122 RPAEHSQAH--VHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNMNKV 181
           +PA H+QA    H   E+    PQP++Y+P ++ GDE    F RNA+LVASGVA+N+N+V
Sbjct: 126 KPAGHAQADAPAHKIEENVRPIPQPQSYRPPHSTGDEYLNRFKRNAILVASGVAKNVNRV 185

Query: 182 CIYIKESFDDILHPYRRRPK 192
             YIK+S DDIL+PYRRRPK
Sbjct: 186 GSYIKQSVDDILYPYRRRPK 202

[Close]
BLAST of CmaCh20G008100 vs. TrEMBL
Match: F6I193_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00590 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 7.6e-62
Identity = 133/216 (61.57%), Postives = 155/216 (71.76%), Query Frame = 1 

Query: 1   MDESDGG-----QNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQ 60
           MD+ D G      +P+PN   N  + SKGKSCKGCLYYSS+ KSKS+ P CIG+S+TL Q
Sbjct: 3   MDKEDDGIPNPSPSPSPNPNPNPVRGSKGKSCKGCLYYSSILKSKSQNPRCIGISRTLHQ 62

Query: 61  VPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLL 120
           VP+YIVGE+ELEASKEGRSL DF+YAC GYSV+L+ K+   D + KQAELPFCVGLEVLL
Sbjct: 63  VPSYIVGESELEASKEGRSLTDFRYACAGYSVYLDNKNPSADQEEKQAELPFCVGLEVLL 122

Query: 121 DKR------------PAEHSQA-HV---HDKTEDSPAFPQPRNYKPSYAAGDE----FTR 180
           DKR            PA H  A HV     + EDS AFPQPR YKP ++ G+E    F R
Sbjct: 123 DKRTSPAHHGSANHVPAHHGSANHVPAPAQRREDSHAFPQPRPYKPPHSTGNEYLNRFVR 182

Query: 181 NAVLVASGVARNMNKVCIYIKESFDDILHPYRRRPK 192
           NA LVASGVARN+NKV  Y+KES DDIL+PYRRRPK
Sbjct: 183 NASLVASGVARNVNKVGNYLKESLDDILYPYRRRPK 218

[Close]
BLAST of CmaCh20G008100 vs. TrEMBL
Match: A0A059BD63_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_G01724 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.7e-61
Identity = 124/190 (65.26%), Postives = 148/190 (77.89%), Query Frame = 1 

Query: 9   NPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYIVGETELEA 68
           NP P    NG+  S+GKSCKGCLYYSS+ KSKS+ PTC+G S+TL +VP+YIVGE+ELEA
Sbjct: 117 NPGPGPNPNGSAGSRGKSCKGCLYYSSVLKSKSQPPTCVGFSRTLNEVPSYIVGESELEA 176

Query: 69  SKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKR--PAEHSQAH 128
           +KEGR+L DF YACVGYSV LEK    +D ++KQAELPFCVGLEVLLDKR  PAE+  A+
Sbjct: 177 TKEGRNLKDFSYACVGYSVFLEKNHQSSDAKDKQAELPFCVGLEVLLDKRTTPAENVPAN 236

Query: 129 VHDK-TEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNMNKVCIYIKESFDD 188
           +H K   D  AFPQ R+YKP+ ++GD+    F RNA LVASGVARN+N+V  YIKES DD
Sbjct: 237 LHKKEAPDGHAFPQQRSYKPAISSGDDYVSRFKRNASLVASGVARNVNRVGNYIKESVDD 296

Query: 189 ILHPYRRRPK 192
           I  PYRRRPK
Sbjct: 297 IFQPYRRRPK 306

[Close]
BLAST of CmaCh20G008100 vs. TrEMBL
Match: A0A061E6G7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_006791 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-55
Identity = 114/190 (60.00%), Postives = 146/190 (76.84%), Query Frame = 1 

Query: 8   QNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYIVGETELE 67
           QNP PN ++N ++ SKGKSCKGCLYYSS  KSKS+ PTC+G+ KTL+QVP+Y++GE+ELE
Sbjct: 12  QNPNPNSSNNQSQGSKGKSCKGCLYYSSALKSKSRNPTCVGIPKTLQQVPSYMIGESELE 71

Query: 68  ASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRP--AEHSQA 127
           ASKEGR+L DFKYACVGYSV+L+ KDS  D  +K  ELPFCVGLEVLLD+ P  A+H  A
Sbjct: 72  ASKEGRTLTDFKYACVGYSVYLDNKDSSTDQAHKPVELPFCVGLEVLLDRTPASADHIPA 131

Query: 128 HVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNMNKVCIYIKESFDD 187
           ++H K+++    PQP+ +K + + GDE    F RNA LVA+GV +N+NK+   IKES DD
Sbjct: 132 NIH-KSKEIHGHPQPQTHKSTQSIGDEYYNRFKRNAGLVAAGVVKNLNKIGNRIKESLDD 191

Query: 188 ILHPYRRRPK 192
           IL+   RRPK
Sbjct: 192 ILY---RRPK 197

[Close]
BLAST of CmaCh20G008100 vs. TAIR10
Match: AT3G51100.1 (AT3G51100.1 unknown protein)

HSP 1 Score: 177.9 bits (450), Expect = 5.7e-45
Identity = 93/184 (50.54%), Postives = 121/184 (65.76%), Query Frame = 1 

Query: 23  KGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYIVGETELEASKEGRSLADFKYAC 82
           KG+SCKG LYYSS  KSKSK P C+G+ +TL QVP+Y+VG++E EASKEGR+LADF Y C
Sbjct: 28  KGRSCKGYLYYSSTLKSKSKNPRCVGIPRTLRQVPDYVVGQSEAEASKEGRTLADFYYGC 87

Query: 83  VGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAHV-----HDKTEDSPAF 142
           +GYSV++  KDS    Q+ + +LP CVGLE+L D+R A  + + V     + K       
Sbjct: 88  LGYSVYMTDKDSSAIKQHTKTQLPVCVGLEILADRRAASGNTSSVPARVQNRKDSREVPV 147

Query: 143 PQPRNYKPSYAAG----------DEFTRNAVLVASGVARNMNKVCIYIKESFDDILHPYR 192
           PQ +N KP+ A              FTRNA LVA+GV +NM +V  Y+KE+ DD L PYR
Sbjct: 148 PQHQNNKPASATATATNTENGFLTRFTRNANLVAAGVMKNMKRVGNYVKETVDDSLDPYR 207

[Close]
BLAST of CmaCh20G008100 vs. NCBI nr
Match: gi|449464844|ref|XP_004150139.1| (PREDICTED: uncharacterized protein LOC101205057 [Cucumis sativus])

HSP 1 Score: 347.4 bits (890), Expect = 1.6e-92
Identity = 171/195 (87.69%), Postives = 181/195 (92.82%), Query Frame = 1 

Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYI 60
           MDESDG QN APNLTSNG KDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTL+QVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGVKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSL DFKYACVGYSV+LEKKDS NDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNMNKVCIYIK 180
           E+SQAH+H+KTEDSPAFPQPR+YKPSY AGDE    F RNA LVASGVARN+N+VC Y+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFDDILHPYRRRPK 192
           ES DDIL+PYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]
BLAST of CmaCh20G008100 vs. NCBI nr
Match: gi|659122195|ref|XP_008461016.1| (PREDICTED: uncharacterized protein LOC103499721 [Cucumis melo])

HSP 1 Score: 341.7 bits (875), Expect = 8.5e-91
Identity = 169/195 (86.67%), Postives = 178/195 (91.28%), Query Frame = 1 

Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYI 60
           MDES G QN APN TSNG KDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTL+QVP YI
Sbjct: 1   MDESGGVQNQAPNRTSNGIKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPKYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSL DFKYACVGYSV+LEKKDS NDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNMNKVCIYIK 180
           E+SQAH+H+KTEDSPAFPQPRNYKPSY AGDE    F RNA LVASGVARN+N+VC Y+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRNYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFDDILHPYRRRPK 192
           ES DDIL+PYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]
BLAST of CmaCh20G008100 vs. NCBI nr
Match: gi|1009149333|ref|XP_015892425.1| (PREDICTED: uncharacterized protein LOC107426696 [Ziziphus jujuba])

HSP 1 Score: 274.6 bits (701), Expect = 1.3e-70
Identity = 134/184 (72.83%), Postives = 147/184 (79.89%), Query Frame = 1 

Query: 12  PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYIVGETELEASKE 71
           PN +SN    S GKSCKGCLYYSS+QKSKSK PTC+G S+TL+QVP+YIVGETELEASKE
Sbjct: 63  PNRSSNRGGGSMGKSCKGCLYYSSIQKSKSKNPTCVGFSRTLQQVPSYIVGETELEASKE 122

Query: 72  GRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAHVHDKT 131
           GRSL DFKYAC+GYSV L KKDS ND QNKQAELPFCVGLEVLLDKRP  H  AH +   
Sbjct: 123 GRSLTDFKYACIGYSVFLNKKDSSNDPQNKQAELPFCVGLEVLLDKRPVNHDAAHANKSE 182

Query: 132 EDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNMNKVCIYIKESFDDILHPYR 191
           E    FPQPR YKP +  GDE    F RNA LVASGVARN+N+VC Y+KES DDIL+PYR
Sbjct: 183 EKVRTFPQPRTYKPPHPTGDEYLNRFKRNAGLVASGVARNVNRVCNYVKESLDDILYPYR 242

[Close]
BLAST of CmaCh20G008100 vs. NCBI nr
Match: gi|645262639|ref|XP_008236852.1| (PREDICTED: uncharacterized protein LOC103335613 [Prunus mume])

HSP 1 Score: 260.8 bits (665), Expect = 1.9e-66
Identity = 134/189 (70.90%), Postives = 155/189 (82.01%), Query Frame = 1 

Query: 9   NPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYIVGETELEA 68
           NP PNL SNG+  +KGKSCKGCLYYSS QKSKSK PTC+GLSKTL+QVP+YIVGETELEA
Sbjct: 17  NPNPNL-SNGS--AKGKSCKGCLYYSSTQKSKSKYPTCVGLSKTLQQVPSYIVGETELEA 76

Query: 69  SKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAH-- 128
           SK  RSL DFKYACVGYSV L++KDSP+D QNKQAELPFCVGLEVL DK+PA H+QA   
Sbjct: 77  SKADRSLTDFKYACVGYSVFLDRKDSPSDQQNKQAELPFCVGLEVLYDKKPAGHAQADAP 136

Query: 129 VHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNMNKVCIYIKESFDDI 188
            H   E+    PQPR+Y+P ++ GDE    F RNA+LVASGVA+N+N+V  YIK+S DDI
Sbjct: 137 AHKIEENVRPIPQPRSYRPPHSTGDEYLNRFKRNAILVASGVAKNVNRVGNYIKQSVDDI 196

Query: 189 LHPYRRRPK 192
           L+PYRRRPK
Sbjct: 197 LYPYRRRPK 202

[Close]
BLAST of CmaCh20G008100 vs. NCBI nr
Match: gi|595793585|ref|XP_007200541.1| (hypothetical protein PRUPE_ppa011664mg [Prunus persica])

HSP 1 Score: 256.9 bits (655), Expect = 2.8e-65
Identity = 135/200 (67.50%), Postives = 160/200 (80.00%), Query Frame = 1 

Query: 2   DESDGG----QNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVP 61
           +++DGG     NP PNL SNG+  +KGKSCKGCLYYSS QKSKSK PTC+GLSKTL+QVP
Sbjct: 6   EDADGGGIKIPNPNPNL-SNGS--AKGKSCKGCLYYSSTQKSKSKYPTCVGLSKTLQQVP 65

Query: 62  NYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDK 121
           +YIVGETELEASK  RSL DFKYACVGYSV L++KDS +D QNKQAELPFCVGLEVL DK
Sbjct: 66  SYIVGETELEASKADRSLTDFKYACVGYSVFLDRKDSSSDQQNKQAELPFCVGLEVLYDK 125

Query: 122 RPAEHSQAH--VHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNMNKV 181
           +PA H+QA    H   E+    PQP++Y+P ++ GDE    F RNA+LVASGVA+N+N+V
Sbjct: 126 KPAGHAQADAPAHKIEENVRPIPQPQSYRPPHSTGDEYLNRFKRNAILVASGVAKNVNRV 185

Query: 182 CIYIKESFDDILHPYRRRPK 192
             YIK+S DDIL+PYRRRPK
Sbjct: 186 GSYIKQSVDDILYPYRRRPK 202

The following BLAST results are available for this feature:
BLAST of CmaCh20G008100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh20G008100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIW6_CUCSA1.1e-9287.69Uncharacterized protein OS=Cucumis sativus GN=Csa_2G251500 PE=4 SV=1[more]
M5W4M3_PRUPE1.9e-6567.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011664mg PE=4 SV=1[more]
F6I193_VITVI7.6e-6261.57Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00590 PE=4 SV=... [more]
A0A059BD63_EUCGR1.7e-6165.26Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_G01724 PE=4 ... [more]
A0A061E6G7_THECC1.8e-5560.00Uncharacterized protein OS=Theobroma cacao GN=TCM_006791 PE=4 SV=1[more]
BLAST of CmaCh20G008100 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51100.15.7e-4550.54 unknown protein[more]
BLAST of CmaCh20G008100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464844|ref|XP_004150139.1|1.6e-9287.69PREDICTED: uncharacterized protein LOC101205057 [Cucumis sativus][more]
gi|659122195|ref|XP_008461016.1|8.5e-9186.67PREDICTED: uncharacterized protein LOC103499721 [Cucumis melo][more]
gi|1009149333|ref|XP_015892425.1|1.3e-7072.83PREDICTED: uncharacterized protein LOC107426696 [Ziziphus jujuba][more]
gi|645262639|ref|XP_008236852.1|1.9e-6670.90PREDICTED: uncharacterized protein LOC103335613 [Prunus mume][more]
gi|595793585|ref|XP_007200541.1|2.8e-6567.50hypothetical protein PRUPE_ppa011664mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G008100.1CmaCh20G008100.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 189..191
scor
NoneNo IPR availablePANTHERPTHR34566FAMILY NOT NAMEDcoord: 22..191
score: 2.5
NoneNo IPR availablePANTHERPTHR34566:SF2SUBFAMILY NOT NAMEDcoord: 22..191
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh20G008100Cucsa.109170Cucumber (Gy14) v1cgycmaB0253
CmaCh20G008100Cla016607Watermelon (97103) v1cmawmB544
CmaCh20G008100Csa2G251500Cucumber (Chinese Long) v2cmacuB542
CmaCh20G008100MELO3C023351Melon (DHL92) v3.5.1cmameB503
CmaCh20G008100ClCG11G003920Watermelon (Charleston Gray)cmawcgB477
CmaCh20G008100CSPI02G12710Wild cucumber (PI 183967)cmacpiB547
CmaCh20G008100CmoCh02G003660Cucurbita moschata (Rifu)cmacmoB554
CmaCh20G008100CmoCh20G008180Cucurbita moschata (Rifu)cmacmoB551
CmaCh20G008100Lsi10G004170Bottle gourd (USVL1VR-Ls)cmalsiB507
CmaCh20G008100Cp4.1LG16g02800Cucurbita pepo (Zucchini)cmacpeB565
CmaCh20G008100Cp4.1LG05g12950Cucurbita pepo (Zucchini)cmacpeB585
CmaCh20G008100MELO3C023351.2Melon (DHL92) v3.6.1cmamedB580
CmaCh20G008100CsaV3_2G015260Cucumber (Chinese Long) v3cmacucB0651
CmaCh20G008100Cla97C11G210640Watermelon (97103) v2cmawmbB567
CmaCh20G008100Bhi10G001551Wax gourdcmawgoB0684
CmaCh20G008100CsGy2G012770Cucumber (Gy14) v2cgybcmaB218
CmaCh20G008100Carg27197Silver-seed gourdcarcmaB1144
CmaCh20G008100Carg25952Silver-seed gourdcarcmaB0599
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh20G008100CmaCh02G003630Cucurbita maxima (Rimu)cmacmaB469
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G008100Cucumber (Gy14) v2cgybcmaB956
CmaCh20G008100Silver-seed gourdcarcmaB0441
CmaCh20G008100Watermelon (97103) v2cmawmbB570
CmaCh20G008100Wax gourdcmawgoB0677
CmaCh20G008100Cucurbita maxima (Rimu)cmacmaB444
CmaCh20G008100Cucurbita moschata (Rifu)cmacmoB548
CmaCh20G008100Wild cucumber (PI 183967)cmacpiB580
CmaCh20G008100Watermelon (97103) v1cmawmB526
CmaCh20G008100Cucurbita pepo (Zucchini)cmacpeB570
CmaCh20G008100Bottle gourd (USVL1VR-Ls)cmalsiB514