Carg27197 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27197
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Altered inheritance of mitochondria protein
Location	Cucurbita_argyrosperma_scaffold_351 : 17664 .. 22334 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATAGCCTGCTATTTGCGAGAGAGAGAGAGTTTTTGGACGAACCCATTGCAGCTGTGATTGAATTTGATGCGCATAGCTATCGTGAGTGTTCAAGAACTTGGAGATGGCTGAATCAGATGGACCTCAGAATCAATCTCCTAACCTTCCTTCTAATGGCGCCAAGGATTCCATTGGCAAGTCCTGTAAGGGCTGCCTCTATTACTCTTCACTTCAGAAATCCAAATCTAAATCTCCCACCTGCGTTGGACTCTCCAAAACCCTCGAACAAGGTACCTCTTTATTGCTTTCATTCGTGCATGTTCATATTCCATTGGATTAGTGATTACCATGAAATTGGGGGTATCGGTAAATGGTTGAGAATCTTTTTAGATTCGTGATTTTGTTGTATTCGATTTCAATTTGGGTTCTGATATGGCTGGTTCTTGAAATCCAAGGAGATTGATATTGTTTTTGCTTTTTTTCTGATTGTTTCATCCTTGGAAGCCATTTCGAACCCTATCATGCATGTTTATGCCTTGGTGGATAAGCTCCCAGTAGTAGAACTTGATATTTGTTGGGTCAAGATGCCACAACCGAGTGTCTTTTTGATGTAGATAGGTAAGAATAGGAGAGAAAGTGGATTAATGAAGCCCTGTTCCTGAATCTCAAAATCCAGTAGGTGAATATGAATCAAGTTATGACGACGAAAATTTGGGAACATTATTATTAGGAGTAGGAATCTTTCAGGATCAAAGTGAAAATTGAACTTCCCTTGCAGAACATTGGCCCGATCTTATAAAGAATGGGACGAGACTATTAGCTGAACGAAGAACGTATTGAATAAACTACATTAGCTCACTTAGAAGCATGAGATAAAGTAGGAGTACTTGTGAAATGGTTTTCGGGTTAGTGTTAGGAACTGGAAAAGGTCTTTGAAAACGGGAGAGGATTAGTCAGAAAAATACGAGCTACGCTCAGATGTCTGCTGCAGCAATGCTTTAGAATGTGATTTGTAACCATGCAAACATCGAGAAATCACTTGGAGTCGTCCGAGTGGTGCAGCTAGCTGCATACTCTATTACTCTCGTTGTGGTTATTGGTCTAAACCTTTGTCATCATGTCCTAGAGATATTAGTATATATGATGGGTCATTGGTTTAGCAGTTGTTTGAGTGGATACATTCATTAATCATTTGAGAATGCATGGGTCGAATATCCTAGATCTATCCATATGTAGAAGAGAATTTGATGGAGGAATTGCCTTTGAATCTATTTAATTGTAAAGGTACGATTGTATTGACTATAGAGATTGATCTCCAACAACTCCGTTAAATGCCTATGAGATCGAGTCTCAATACGAATGCTAGTTCTTACTGTTCTCTCCTCTCCCGATAGCTCGAAGTCAGCTTACAATGATGTTGATACAAGATATTGTAGAACTTACCAATGAGGCCCTATTGATTAGTATTATGCAAAAGATCAGATTCTACGGGATCAAACCTATGGGACATAAGGAATGCTATGAGGGCTTGGACGGAATAAATCAAAAGTCTGCTGGGTGATCGAAATCGCTCAGGTTATTGGAGATGCGTTTTCTACGGAGGATTTGTGGGTAGGAATTGAGCTTCTTTGTGAGTTATTCCCTTGCATTTATCATTTATCTGATCGGAAGTAATTCTCAATGGCCTATATTTTGTCTACTTTTGATTCATCCTCTTCGCCTTCTTTGGGGTTTTGTTGGCGAGTCTTCGAAGGTAATGGGCATAGGAATATTTGGGTTTGGGTTCCTAATCCTCCTAAGGACTTTGGCCCTTTTTCCTCATTCCATGTTCCCCGTCTCCTACTCGGGGCCTTTTGGAGGTGAAAGTCCCTAAGAAAGTGAAGTTCTTTGCTTGACAAGTCTTACTAGGTAGAGTGAGCACCCAGGATTGCATCCAACGATGACATTCTTCGTAACAGCTCAAGCCCACCGCTAGCATATATTGTCTTCTTTGGTCCATTACGTATCGTCGTCTGTCTCACGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTCCCCCTCTCCAACCGACGTGGGATTTCACATTCTTCCTTAGTATTGTGTCCATAATGGTGTTTCATTTGTCATCAACAATCGGAGGATCTTGACCATCTTTCGTCGGGTTACCAGTTTGCTTACTCCATGTGGAGTCGTTGTTTTAGGCTGTTTACGTTAGTGTCTATTCGTGTAATTTGTCAGAGGGCTTCTTTTTTGTTATACCCATAGTAAATATCACTTTTTGTAAGCAGTACCAAACTACATAGTGGGAGAAACCGAGCAGGAAGCTTCAAAAGAGGGAAGAAGTCTGACAGATTTCAAGTATGCTTGCGTTGGTTACTCTGTCTACTTAGAAAAGAAAGGTTCATCAAACGACGAACAAAACAAACAAGCTGAGCTGCCGTTCTGCGTCGGTTTAGAGGTTTGTAATGCCTCATCTGCTTATGTTGTGATGCTCTGTTTATTCTTAATAGCCCTTAAAATTCATGTGTAGCCTGAATTTTTTGCCATTTTGTGGGATATTTGGGCTTATTAGGAGGAACTGTTAGATTTTTAAAGGGTCTGAGAGATTTGGGGAGGAGCTTTTGGGGTTCGTTAAATTTAACTCTTCTTTACGAGTGTCCGTTAATTAGACTCTTCGAGCTAAATTAATAAAAATACTCTTGAACTTTATACTTTGTCTCAAATATACCTCTAACTTTCAAAAGTTTTAATAATACCCTTAAACTTTGAAAAAAAGTCTCAAAAACACCCTTTTAAAAAAAGTTCAAAAATACCCTTACAGTCAGTTTTGGATAGAAACTGTTAATACTATGTTTCAAAAGTTTTTATAAGTATTTTTTAAACATAGTATTGACGGTAAGGGTATTTTTTAATTTAATAACGTTGGAAGGGTATTAATGAAAATGTTTAAAATTCAAGGTTATTTTTGAAACACTATTAAAAGTTCAAGAGTATTTTTGAAACATAATACGGTTTCCCTCCAAGAGTAATAATGAGGGTATTTTTTAGATTTTTTAAAAGTTTAAGGGTATTTTTATTAATTTAGCCGACTCTTTGGTCTCGCATGGGTCCCTAGACCCTACAATTTTAGATGCATTTTTAGTTTATATTTCATTAAAATGTTATTCTTTTATCATTTTATATCTTGACAACAATGATATGCCTGTTAGGTATTGTTGGACAAAAGACCTGCGGAACAGTCCCAAGCTCATATACATAATAAAACTGAAGGTACTCCTTCAATTTCCTTTTGTTAATGATAATGCTCATCAAGATTTTCCGATATTCTTCTATTATTTTATCGTCTTAGCTACCTTTGTTTCGAGCTCGATAAATTTGTTAATCCAATGTTGTAGAGCTTAGAAAGCACGAACACTTTGACACTGTTTAGACACGTATTGCACACTTGTGATGAATGTTTGACACTAATGGTACAAATTTAATAGCATGTATGTTAGGTGTCACGGTCATATTTGTCCAAGGCGTGTTGTATTGGCCACATGTTGGATGTCCCGGTCATGCACGTCTAGGACGTGTTGTCCATGCCCATTCCAAACCCTTTTTACATGCTTTCATTTTAGATAGGTCTTTACCACTACATGTTATATCAATACAGGGGCGTATGACTTTTCACCAAAATCATGTCTACACCCACCAGGACTAAAATAAAATGTACTATAGGAGAATGGGACTAGTCGTCAATTCTTCTGAGTTATATACTATTTAAGTCATGATGTTTCTTTCTCTGCTTGTAGCCATCTAACATTGCTTTCTTAAATTCTTTTGAATTGTTTTCAAATGTATTTTCTCGCTCACGTTTTCTAAAACAACTTTCGCAAACGTGACTCAAGGCTCGAGAATACGTTGACGTTGTTTGCGAAGTCCGAATTTCTCAAGCTGACTTGTTCACTGGGTTAGAACAAGTGTTGCACAATTGCTGTCCCCCTACCGCAAGAGTGTGATTGTGACATTAGGCATGCATAGGATACTGGTTTAAGCATAATAACTAGATTTTTACCAAATGTGTCCGTGTGTCCGTGTGTCCGGGTCTTAGATTTTTACCAAATGAACTGTCACCATATTGTGTCTCGTGTCTGTGTCCGTGCTTCTTAGTCGGAGAGATACTAATCTTCAAGTTTGATCTTCGTATTCAACAGATAGCCCCGCCTTTCCACAGCCACGCAGCTATAAACCGTCGTATCCAGCTGGAGACGAGTACCTAAACAGGCAAAAACTTTCTTGACACACTATATCTTTTGAATGCTAAATGGGTTTCAATTTATGAACAATGTCTATGAACAATGTGGTGCAGGTTTAAAAGAAACGCAGCCCTTGTTGCATCAGGTGTAGCAAGAAATGTGAACCGAGTTTGCAACTACATAAAAGAGAGCTTCGACGATATCTTATACCCTTACCGGAGACGACCCAAATGAGATACGGTTGTCCACGGACTACTAGAATAAACAAGAGTCGTTACAATAGTAGTTTGTCGAATCCCGACATCGCCCGATCATGTGAAATATTGATCAAGTTCTTATCTTTCTTACAACTGTGTAGAGATGGGCATGGGTGTAATAAATAATGTGATGAATTTAATCATCTTTAAGGATTGTTCATGCTTGTTC

mRNA sequence

TTCATAGCCTGCTATTTGCGAGAGAGAGAGAGTTTTTGGACGAACCCATTGCAGCTGTGATTGAATTTGATGCGCATAGCTATCGTGAGTGTTCAAGAACTTGGAGATGGCTGAATCAGATGGACCTCAGAATCAATCTCCTAACCTTCCTTCTAATGGCGCCAAGGATTCCATTGGCAAGTCCTGTAAGGGCTGCCTCTATTACTCTTCACTTCAGAAATCCAAATCTAAATCTCCCACCTGCGTTGGACTCTCCAAAACCCTCGAACAAGTACCAAACTACATAGTGGGAGAAACCGAGCAGGAAGCTTCAAAAGAGGGAAGAAGTCTGACAGATTTCAAGTATGCTTGCGTTGGTTACTCTGTCTACTTAGAAAAGAAAGGTTCATCAAACGACGAACAAAACAAACAAGCTGAGCTGCCGTTCTGCGTCGGTTTAGAGGTATTGTTGGACAAAAGACCTGCGGAACAGTCCCAAGCTCATATACATAATAAAACTGAAGATAGCCCCGCCTTTCCACAGCCACGCAGCTATAAACCGTCGTATCCAGCTGGAGACGAGTTTAAAAGAAACGCAGCCCTTGTTGCATCAGGTGTAGCAAGAAATGTGAACCGAGTTTGCAACTACATAAAAGAGAGCTTCGACGATATCTTATACCCTTACCGGAGACGACCCAAATGAGATACGGTTGTCCACGGACTACTAGAATAAACAAGAGTCGTTACAATAGTAGTTTGTCGAATCCCGACATCGCCCGATCATGTGAAATATTGATCAAGTTCTTATCTTTCTTACAACTGTGTAGAGATGGGCATGGGTGTAATAAATAATGTGATGAATTTAATCATCTTTAAGGATTGTTCATGCTTGTTC

Coding sequence (CDS)

ATGGCTGAATCAGATGGACCTCAGAATCAATCTCCTAACCTTCCTTCTAATGGCGCCAAGGATTCCATTGGCAAGTCCTGTAAGGGCTGCCTCTATTACTCTTCACTTCAGAAATCCAAATCTAAATCTCCCACCTGCGTTGGACTCTCCAAAACCCTCGAACAAGTACCAAACTACATAGTGGGAGAAACCGAGCAGGAAGCTTCAAAAGAGGGAAGAAGTCTGACAGATTTCAAGTATGCTTGCGTTGGTTACTCTGTCTACTTAGAAAAGAAAGGTTCATCAAACGACGAACAAAACAAACAAGCTGAGCTGCCGTTCTGCGTCGGTTTAGAGGTATTGTTGGACAAAAGACCTGCGGAACAGTCCCAAGCTCATATACATAATAAAACTGAAGATAGCCCCGCCTTTCCACAGCCACGCAGCTATAAACCGTCGTATCCAGCTGGAGACGAGTTTAAAAGAAACGCAGCCCTTGTTGCATCAGGTGTAGCAAGAAATGTGAACCGAGTTTGCAACTACATAAAAGAGAGCTTCGACGATATCTTATACCCTTACCGGAGACGACCCAAATGA

Protein sequence

MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYIVGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPAEQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEFKRNAALVASGVARNVNRVCNYIKESFDDILYPYRRRPK

Homology

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BLAST of Carg27197 vs. NCBI nr
Match: XP_022946944.1 (uncharacterized protein LOC111450972 [Cucurbita moschata])

HSP 1 Score: 384.0 bits (985), Expect = 2.9e-103
Identity = 191/195 (97.95%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 1   MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI 60
           MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI
Sbjct: 1   MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI 60

Query: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120
           VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDE----FKRNAALVASGVARNVNRVCNYIK 180
           EQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDE    FKRNAALVASGVARNVNRVCNYIK
Sbjct: 121 EQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYIK 180

Query: 181 ESFDDILYPYRRRPK 192
           ESFDDILYPYRRRPK
Sbjct: 181 ESFDDILYPYRRRPK 195

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BLAST of Carg27197 vs. NCBI nr
Match: XP_023533149.1 (uncharacterized protein LOC111795126 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.1 bits (967), Expect = 3.6e-101
Identity = 187/194 (96.39%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 1   MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI 60
           MAESDGPQN SPNLPSNGAKD IGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI
Sbjct: 1   MAESDGPQNHSPNLPSNGAKDFIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI 60

Query: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120
           VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDE----FKRNAALVASGVARNVNRVCNYIK 180
           EQSQAH+HNKTEDSPAFPQPRSYKPSYPAGDE    FKRNAALVASGVARNVNRVCNYIK
Sbjct: 121 EQSQAHLHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYIK 180

Query: 181 ESFDDILYPYRRRP 191
           ESFDDILYPYRRRP
Sbjct: 181 ESFDDILYPYRRRP 194

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BLAST of Carg27197 vs. NCBI nr
Match: XP_023007309.1 (uncharacterized protein LOC111499844 [Cucurbita maxima])

HSP 1 Score: 369.4 bits (947), Expect = 7.4e-99
Identity = 186/195 (95.38%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI 60
           MAE DG QNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVG SKTLEQVPNYI
Sbjct: 1   MAELDGAQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGFSKTLEQVPNYI 60

Query: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120
           VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDE----FKRNAALVASGVARNVNRVCNYIK 180
            QSQAHIHNKTEDSPAFPQPRSYKPSYPAGDE    FKRNA LVASGVARNVNRVCNYIK
Sbjct: 121 -QSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAVLVASGVARNVNRVCNYIK 180

Query: 181 ESFDDILYPYRRRPK 192
           ESFDDILYPYRRRPK
Sbjct: 181 ESFDDILYPYRRRPK 194

[Close]

BLAST of Carg27197 vs. NCBI nr
Match: XP_004150139.1 (PREDICTED: uncharacterized protein LOC101205057 [Cucumis sativus] >KGN61850.1 hypothetical protein Csa_2G251500 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 2.5e-94
Identity = 176/195 (90.26%), Postives = 181/195 (92.82%), Query Frame = 0


Query: 1   MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI 60
           M ESDG QNQ+PNL SNG KDS GKSCKGCLYYSSLQKSKSK+PTC+GLSKTL+QVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGVKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120
           VGETE EASKEGRSLTDFKYACVGYSVYLEKK SSND QNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDE----FKRNAALVASGVARNVNRVCNYIK 180
           E SQAHIHNKTEDSPAFPQPRSYKPSYPAGDE    FKRNAALVASGVARNVNRVCNY+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFDDILYPYRRRPK 192
           ES DDILYPYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]

BLAST of Carg27197 vs. NCBI nr
Match: XP_008461016.1 (PREDICTED: uncharacterized protein LOC103499721 [Cucumis melo])

HSP 1 Score: 345.5 bits (885), Expect = 1.1e-91
Identity = 172/195 (88.21%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 1   MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI 60
           M ES G QNQ+PN  SNG KDS GKSCKGCLYYSSLQKSKSK+PTC+GLSKTL+QVP YI
Sbjct: 1   MDESGGVQNQAPNRTSNGIKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPKYI 60

Query: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120
           VGETE EASKEGRSLTDFKYACVGYSVYLEKK SSND QNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDE----FKRNAALVASGVARNVNRVCNYIK 180
           E SQAHIHNKTEDSPAFPQPR+YKPSYPAGDE    FKRNAALVASGVARNVNRVCNY+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRNYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFDDILYPYRRRPK 192
           ES DDILYPYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

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BLAST of Carg27197 vs. TAIR10
Match: AT3G51100.1 (unknown protein)

HSP 1 Score: 165.2 bits (417), Expect = 3.9e-41
Identity = 92/198 (46.46%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 10  QSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYIVGETEQEAS 69
           + P     G+ +  G+SCKG LYYSS  KSKSK+P CVG+ +TL QVP+Y+VG++E EAS
Sbjct: 16  EKPEQKQRGSLEK-GRSCKGYLYYSSTLKSKSKNPRCVGIPRTLRQVPDYVVGQSEAEAS 75

Query: 70  KEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPAEQS----QA 129
           KEGR+L DF Y C+GYSVY+  K SS  +Q+ + +LP CVGLE+L D+R A  +     A
Sbjct: 76  KEGRTLADFYYGCLGYSVYMTDKDSSAIKQHTKTQLPVCVGLEILADRRAASGNTSSVPA 135

Query: 130 HIHNKTEDSPAFPQPRSYKPSYPAG------------DEFKRNAALVASGVARNVNRVCN 189
            + N+ +DS   P                          F RNA LVA+GV +N+ RV N
Sbjct: 136 RVQNR-KDSREVPXXXXXXXXXXXXXXXXXXXENGFLTRFTRNANLVAAGVMKNMKRVGN 195

Query: 190 YIKESFDDILYPYRRRPK 192
           Y+KE+ DD L PYR+RPK
Sbjct: 196 YVKETVDDSLDPYRKRPK 211

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BLAST of Carg27197 vs. TrEMBL
Match: tr|A0A0A0LIW6|A0A0A0LIW6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G251500 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.6e-94
Identity = 176/195 (90.26%), Postives = 181/195 (92.82%), Query Frame = 0


Query: 1   MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI 60
           M ESDG QNQ+PNL SNG KDS GKSCKGCLYYSSLQKSKSK+PTC+GLSKTL+QVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGVKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120
           VGETE EASKEGRSLTDFKYACVGYSVYLEKK SSND QNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDE----FKRNAALVASGVARNVNRVCNYIK 180
           E SQAHIHNKTEDSPAFPQPRSYKPSYPAGDE    FKRNAALVASGVARNVNRVCNY+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFDDILYPYRRRPK 192
           ES DDILYPYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]

BLAST of Carg27197 vs. TrEMBL
Match: tr|A0A1S3CEZ6|A0A1S3CEZ6_CUCME (uncharacterized protein LOC103499721 OS=Cucumis melo OX=3656 GN=LOC103499721 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 7.6e-92
Identity = 172/195 (88.21%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 1   MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI 60
           M ES G QNQ+PN  SNG KDS GKSCKGCLYYSSLQKSKSK+PTC+GLSKTL+QVP YI
Sbjct: 1   MDESGGVQNQAPNRTSNGIKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPKYI 60

Query: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120
           VGETE EASKEGRSLTDFKYACVGYSVYLEKK SSND QNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDE----FKRNAALVASGVARNVNRVCNYIK 180
           E SQAHIHNKTEDSPAFPQPR+YKPSYPAGDE    FKRNAALVASGVARNVNRVCNY+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRNYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFDDILYPYRRRPK 192
           ES DDILYPYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]

BLAST of Carg27197 vs. TrEMBL
Match: tr|A0A2I4GBU2|A0A2I4GBU2_9ROSI (uncharacterized protein LOC109006530 isoform X1 OS=Juglans regia OX=51240 GN=LOC109006530 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.9e-66
Identity = 135/192 (70.31%), Postives = 157/192 (81.77%), Query Frame = 0


Query: 6   GPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYIVGETE 65
           G QNQ PN   N ++ S GKSCKGCLYYSSLQKSKSK PTCVGLS+ L QVP Y+VGETE
Sbjct: 13  GLQNQKPN--PNQSEGSKGKSCKGCLYYSSLQKSKSKKPTCVGLSQAL-QVPRYVVGETE 72

Query: 66  QEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPAEQSQA 125
            EAS+EGRSL DFKYAC+GYSVY++K  SS+D+QNKQAELPFCVGLE+LLD+RPA+ + A
Sbjct: 73  LEASREGRSLADFKYACLGYSVYVDKNNSSSDQQNKQAELPFCVGLEILLDRRPADHAPA 132

Query: 126 HIHNKTEDSPAFPQP--RSYKPSYPAGDE----FKRNAALVASGVARNVNRVCNYIKESF 185
           H+    ED+ A PQP  R+YKP++  G+E    FKRNA LVASGVARNVNRVC Y+K+S 
Sbjct: 133 HV--PKEDAHALPQPQSRTYKPAHHIGEEYLNRFKRNAGLVASGVARNVNRVCIYVKDSL 192

Query: 186 DDILYPYRRRPK 192
           DDILYPYRRRPK
Sbjct: 193 DDILYPYRRRPK 199

[Close]

BLAST of Carg27197 vs. TrEMBL
Match: tr|A0A2P4IAG8|A0A2P4IAG8_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_47114 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.9e-66
Identity = 131/178 (73.60%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 20  KDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYIVGETEQEASKEGRSLTDFK 79
           K S GKSCKGCLYYSSLQ+SKSK+PTCVG+ + L QVP+YIVGETE EASKEGRSLTDFK
Sbjct: 29  KGSKGKSCKGCLYYSSLQRSKSKNPTCVGIPRNLHQVPSYIVGETELEASKEGRSLTDFK 88

Query: 80  YACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPAEQSQAHIHNKTEDSPAF-- 139
           YACVGYSV+L KK SS+D+QNKQAELPFCVGLEVLLD+RPA+ +QA  H   +D      
Sbjct: 89  YACVGYSVFLNKKDSSSDQQNKQAELPFCVGLEVLLDRRPADHAQAPAHVNKDDGRVLPQ 148

Query: 140 PQPRSYKPSYPAGDE----FKRNAALVASGVARNVNRVCNYIKESFDDILYPYRRRPK 192
           PQPR+Y+P++  G+E    FKRNA+LVASGVARNVNRV  YIKES DDILYPYRRRPK
Sbjct: 149 PQPRTYRPAHSTGEEYLNRFKRNASLVASGVARNVNRVGIYIKESLDDILYPYRRRPK 206

[Close]

BLAST of Carg27197 vs. TrEMBL
Match: tr|A0A2I4GBT5|A0A2I4GBT5_9ROSI (uncharacterized protein LOC109006530 isoform X2 OS=Juglans regia OX=51240 GN=LOC109006530 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 4.2e-66
Identity = 134/192 (69.79%), Postives = 157/192 (81.77%), Query Frame = 0


Query: 6   GPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYIVGETE 65
           G QNQ PN   N ++ S GKSCKGCLYYSSLQKSKSK PTCVGLS+ L QVP Y+VGETE
Sbjct: 13  GLQNQKPN--PNQSEGSKGKSCKGCLYYSSLQKSKSKKPTCVGLSQAL-QVPRYVVGETE 72

Query: 66  QEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPAEQSQA 125
            EAS+EGRSL DFKYAC+GYSVY++K  SS+D+QNKQAELPFCVGLE+LLD+RPA+ + A
Sbjct: 73  LEASREGRSLADFKYACLGYSVYVDKNNSSSDQQNKQAELPFCVGLEILLDRRPADHAPA 132

Query: 126 HIHNKTEDSPAFPQP--RSYKPSYPAGDE----FKRNAALVASGVARNVNRVCNYIKESF 185
           H+    +D+ A PQP  R+YKP++  G+E    FKRNA LVASGVARNVNRVC Y+K+S 
Sbjct: 133 HV---PKDAHALPQPQSRTYKPAHHIGEEYLNRFKRNAGLVASGVARNVNRVCIYVKDSL 192

Query: 186 DDILYPYRRRPK 192
           DDILYPYRRRPK
Sbjct: 193 DDILYPYRRRPK 198

The following BLAST results are available for this feature:

BLAST of Carg27197 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946944.1	2.9e-103	97.95	uncharacterized protein LOC111450972 [Cucurbita moschata]	[more]
XP_023533149.1	3.6e-101	96.39	uncharacterized protein LOC111795126 [Cucurbita pepo subsp. pepo]	[more]
XP_023007309.1	7.4e-99	95.38	uncharacterized protein LOC111499844 [Cucurbita maxima]	[more]
XP_004150139.1	2.5e-94	90.26	PREDICTED: uncharacterized protein LOC101205057 [Cucumis sativus] >KGN61850.1 hy...	[more]
XP_008461016.1	1.1e-91	88.21	PREDICTED: uncharacterized protein LOC103499721 [Cucumis melo]	[more]

BLAST of Carg27197 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51100.1	3.9e-41	46.46	unknown protein	[more]

BLAST of Carg27197 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg27197 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIW6\|A0A0A0LIW6_CUCSA	1.6e-94	90.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G251500 PE=4 SV=1	[more]
tr\|A0A1S3CEZ6\|A0A1S3CEZ6_CUCME	7.6e-92	88.21	uncharacterized protein LOC103499721 OS=Cucumis melo OX=3656 GN=LOC103499721 PE=...	[more]
tr\|A0A2I4GBU2\|A0A2I4GBU2_9ROSI	1.9e-66	70.31	uncharacterized protein LOC109006530 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2P4IAG8\|A0A2P4IAG8_QUESU	1.9e-66	73.60	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_47114 PE=4 SV=1	[more]
tr\|A0A2I4GBT5\|A0A2I4GBT5_9ROSI	4.2e-66	69.79	uncharacterized protein LOC109006530 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27197-RA	Carg27197-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..148
None	No IPR available	PANTHER	PTHR34566:SF2	SUBFAMILY NOT NAMED	coord: 8..191
None	No IPR available	PANTHER	PTHR34566	FAMILY NOT NAMED	coord: 8..191

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27197	Cla016607	Watermelon (97103) v1	carwmB0822
Carg27197	Csa2G251500	Cucumber (Chinese Long) v2	carcuB0838
Carg27197	MELO3C023351	Melon (DHL92) v3.5.1	carmeB0818
Carg27197	ClCG11G003920	Watermelon (Charleston Gray)	carwcgB0797
Carg27197	CSPI02G12710	Wild cucumber (PI 183967)	carcpiB0860
Carg27197	Cucsa.109170	Cucumber (Gy14) v1	carcgyB0940
Carg27197	CmaCh02G003630	Cucurbita maxima (Rimu)	carcmaB1145
Carg27197	CmaCh20G008100	Cucurbita maxima (Rimu)	carcmaB1144
Carg27197	CmoCh02G003660	Cucurbita moschata (Rifu)	carcmoB1115
Carg27197	CmoCh20G008180	Cucurbita moschata (Rifu)	carcmoB1114
Carg27197	Lsi10G004170	Bottle gourd (USVL1VR-Ls)	carlsiB753
Carg27197	Cp4.1LG16g02800	Cucurbita pepo (Zucchini)	carcpeB1155
Carg27197	Cp4.1LG05g12950	Cucurbita pepo (Zucchini)	carcpeB1156
Carg27197	CsGy2G012770	Cucumber (Gy14) v2	carcgybB0813
Carg27197	MELO3C023351.2	Melon (DHL92) v3.6.1	carmedB0829
Carg27197	CsaV3_2G015260	Cucumber (Chinese Long) v3	carcucB0863
Carg27197	Cla97C11G210640	Watermelon (97103) v2	carwmbB0857
Carg27197	Bhi10G001551	Wax gourd	carwgoB0961

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg27197	Carg25952	Silver-seed gourd	carcarB443

The following block(s) are covering this gene:

None