CmaCh20G006630 (gene) Cucurbita maxima (Rimu)

NameCmaCh20G006630
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr20 : 3051065 .. 3052147 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTCTCTTGTCTGTCCTATATAAGCCACTCTCATGCTCCCTCTTACTTCCATCCCACCCTTTCTTCCGCTGCTTCAATATCATGTAACTCTGTTTATCTGTGTTCATAAATTTCTATCATAATTATACATTTCAACTTCTTTTACATATGTTTGTGTGTGATCTTTTGAAAATTTGGGGAAAAATTCGAATTGGGTCATTGTTCATTTCTTATTTCCTGGCTCCGATGGGGTTGTTTTGCTGATATTGCAGGTTGTACCACCGGAGTCAGCTCTGTTTAAGTGGAAACCAAGGAAGTAGTTGTTGAAGAAGAGCCAAAGGAAGAAGCTGCCGAAGAAGAGGCGGCTGAAGTGGCAGCTGAGCTTGTGGTGGAAGAGGAGACCAAACCAGCAGAGGCTAAGCCACCGGCGGTGGAGGTGGTGGAAGAGAAGCCTGCAGAAGAAGCAGAGGAGAAACCAGAAGAAGAATCCGCAGCTGAGAAGGCCGAGTAATTGAATTTGAATCCAAATTATGGTTGAGAAATTTGGTCACTTTAATGTCTTTTTGGTTCATATTATTCAAGAACTATGACACCATGTGATCGGACGCTTAGAATGAACGGCCGCTTAGAATCATAATTTAGTTTGTTTATATGTATAACAGAGCTCTGCTCTGTTCTGCTTTTATCAAGCTACAAAGATGAAAAGGGTACAACTTTCATAACCATTTGAAGAACACGATTACTATTCAAAGAGGGAATCGATCCGATTCAGGCTACCAAAATGAACAACAGTATGAAACCAATTGGGCATGCCCTCAAAAATGACATCCATAAATTTACCAGTAGTTGGGTTGAAAAGAACCAGAGCTCTGTTTCTATACTCCAACAAAATCTCTCCACTTTTCAAAATGCAAACAACTTTAACGATTTTACTCCGCAGGACAATCTTGGAGACCTTGAAAGAAATCTCCGATGCTTCTTGTTTGATGGATTTGGGCATGTAAGCCCCAATGTTAAAGCGTTTGACCCAAGATTCCTTCACGCCGTACTGTTCCATGATCCATATTTCCATTTTGCCGTGAGTACAGTAAACGGCGGCTGA

mRNA sequence

CCATTCTCTTGTCTGTCCTATATAAGCCACTCTCATGCTCCCTCTTACTTCCATCCCACCCTTTCTTCCGCTGCTTCAATATCATGAAGTAGTTGTTGAAGAAGAGCCAAAGGAAGAAGCTGCCGAAGAAGAGGCGGCTGAAGTGGCAGCTGAGCTTGTGGTGGAAGAGGAGACCAAACCAGCAGAGGCTAAGCCACCGGCGGTGGAGGTGGTGGAAGAGAAGCCTGCAGAAGAAGCAGAGGAGAAACCAGAAGAAGAATCCGCAGCTGAGAAGGCCGAAACACGATTACTATTCAAAGAGGGAATCGATCCGATTCAGGCTACCAAAATGAACAACAGTATGAAACCAATTGGGCATGCCCTCAAAAATGACATCCATAAATTTACCAGTAGTTGGGTTGAAAAGAACCAGAGCTCTGTTTCTATACTCCAACAAAATCTCTCCACTTTTCAAAATGCAAACAACTTTAACGATTTTACTCCGCAGGACAATCTTGGAGACCTTGAAAGAAATCTCCGATGCTTCTTGTTTGATGGATTTGGGCATGTAAGCCCCAATGTTAAAGCGTTTGACCCAAGATTCCTTCACGCCGTACTGTTCCATGATCCATATTTCCATTTTGCCGTGAGTACAGTAAACGGCGGCTGA

Coding sequence (CDS)

ATGCTCCCTCTTACTTCCATCCCACCCTTTCTTCCGCTGCTTCAATATCATGAAGTAGTTGTTGAAGAAGAGCCAAAGGAAGAAGCTGCCGAAGAAGAGGCGGCTGAAGTGGCAGCTGAGCTTGTGGTGGAAGAGGAGACCAAACCAGCAGAGGCTAAGCCACCGGCGGTGGAGGTGGTGGAAGAGAAGCCTGCAGAAGAAGCAGAGGAGAAACCAGAAGAAGAATCCGCAGCTGAGAAGGCCGAAACACGATTACTATTCAAAGAGGGAATCGATCCGATTCAGGCTACCAAAATGAACAACAGTATGAAACCAATTGGGCATGCCCTCAAAAATGACATCCATAAATTTACCAGTAGTTGGGTTGAAAAGAACCAGAGCTCTGTTTCTATACTCCAACAAAATCTCTCCACTTTTCAAAATGCAAACAACTTTAACGATTTTACTCCGCAGGACAATCTTGGAGACCTTGAAAGAAATCTCCGATGCTTCTTGTTTGATGGATTTGGGCATGTAAGCCCCAATGTTAAAGCGTTTGACCCAAGATTCCTTCACGCCGTACTGTTCCATGATCCATATTTCCATTTTGCCGTGAGTACAGTAAACGGCGGCTGA

Protein sequence

MLPLTSIPPFLPLLQYHEVVVEEEPKEEAAEEEAAEVAAELVVEEETKPAEAKPPAVEVVEEKPAEEAEEKPEEESAAEKAETRLLFKEGIDPIQATKMNNSMKPIGHALKNDIHKFTSSWVEKNQSSVSILQQNLSTFQNANNFNDFTPQDNLGDLERNLRCFLFDGFGHVSPNVKAFDPRFLHAVLFHDPYFHFAVSTVNGG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G006630.1CmaCh20G006630.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 27..47
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh20G006630Carg05141Silver-seed gourdcarcmaB1121
The following gene(s) are paralogous to this gene:

None