CmaCh20G001260 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G001260
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Early nodulin-like protein 18
Location	Cma_Chr20 : 599765 .. 602483 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAGTTTAGAGTAATTAGAGGGGAAATGGAAGGGTATATTAGAAAATGGACCAAAAGAGTATATAGCTGGAAGCACAAGAGAAGAAGCCTGCCTTTGTTCACTGGACTACATATATCCCTCCTGCAGAGCCAAAATATGTCTCGGTGGTTCTAGTTCGCTTCCAATTCACGAATCCCTAGAAGAATTAATGGAACAGAGGAAGTACAGAGCCGATCTTCTTTCACCTGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCCGCCGTTCACGCCTACAAGAACTACACCGTCGGAGATTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTATAAAAAATGGACGGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAAGTAAGCTCTGATTCTCTGTTTTCACTAAGCTCTGTTCCGCTATTCTTTGCTCGCTCTCTCTATTGATTCCTGAATTTGATTTTCGAGTGATCGTTTCGCGAACTCTTGAGATTTCGAATTTTGATTTTGATTTTTGATTGATCGCTTCGCAAACTCAATATTTCGGATCTCTCTCTTCCGTTTTCTAAAAACTCATACGCTTCAAGTGATTTGATTTCCGTCTTCGATTTTATCAGTCTGCTCGTTCAAGTTTAGCATCTTTTGGTTTTGAATTGTAAATTTCTCCTGTTTTAGTTTGTTTTTATCGTTTTCCTGAAAATGTGTGAGCCATCTGCTTGCTATATTTTGGTGTTTCCGTCGATCTCTCGAATTTTTGTGTATTTTTCTAAATGAATCGAGAGCTGTTACCTAGTTAAATGACAATATCGAACAAACTCGACTTTGTCTCGCTTTAACCTAACTCATATTACATTGATACTATATTTAGCGGCTCTCAATCACAGTTTGAATCCTTGCCCCTCACGTAATACAATATTACAGAAGAACAATAATAATGTGATAATGAGTTCTATTATTAGCATTATTCCAATACATTATAATGTTTAAATCATGTTGAACCAACCAATTTTAGTTAGTAAGGTCGAGTTTTGAATGTAATTTCGTAAAAGTTAAACTATAAATTTAGTCTTTCCATTCTTAAAAAAATCACAAATGAAAATAAAAATCTAGAGTTTCATCCACTTTTAACTTTATATTTACTAAATCAATTATTTTTTAAATTTGATTTTTTCTAAACCATTAAACAGAAGATTGAAAATGTGAAAGAACGCTTCTAAAATTTTAAATACCAAATAAATTACAAATGATTTATAATTTAACATGTTTTAAAATTGAAATGGTAAGTGGAGTCTTCACTGTTTTCATTGGTTTTTTTTTTTTTTTTTTGGTAAGCTTCGGATAGTAAACGATTGAAAGGAGAAAGTTCAAGAAATAACTCATTATCCAGCCAAAATAAATAAATAAATAAATATGTATATGTATATATAATATAAAAGGCACCAACCGTGCGTACCCCATGTTGTTTCTTTTGGATAATGATTTTGACAGCTAAACGAACATGCCGGTGCCTACTGCCTTGTGTGTTTACTTCTTTCTCCGTCTCTTTTTTAGAAGACTTTCCACCATGCACGCAACTGTGATTCTTGATAATGTAACTTGTAACACGTGTTGGTTGTTAAGAGAAGCGTCGGTAGTGTTTATGCATGTGATAGACATATCATCCATGTGCCGCCTTCTTGTAAAGCTGTAAACTTTGAAGACCGTAAAACTTTTACTGGTTATTAAATTAGTCGTTAATTTCCTATAATTTTTTTTAACAGTTAACTAGGTGTACGATGAAGGGTTCATATATTTGACCTTTTCTTCGGGAGTTTATACTTAAATTATTAACTTATTAGCTTCGATATACACTGTTTAGGAATGCACTTGGAATATGTAATATTATGCTGGATCAACTGAAAATTTATGGAATTTCAGGGCTGAAAATAATTATAGAGATCGTTGTGATGTTCATTTTGCAGTTTTTAACACTGACAACAATCACTCGGTTGTGCTTACGTACAACTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAAGATGACACGACAGAATGGTCTGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCAACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCATGGACAGGGCCTCCCGAAGAGCATGAGAGACGAAGCTCCGGCTCCTGTAGTTCCCGACACCGGCGACCAAACCGAATCTGCTCCTGACACCATTGTCCCTTCCAACTTCGACAATCCCCAAAACGACGCTGCTGATAGTGACAAGGAGGTTTCGGGCTCAGTTTCGCTATCGCTTCACTTCAAGTTTAATGAGTTTTTCTTCGTGTTAGTTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGATTGTGTTTTCTTACTTTTGTTTATTTCTTAATTTCATTTTTACGGATTTTAATTTTACATTAGTGTGGGTCTTTTTACTGGGCGTTCAAGTATTAATACACACGGTTAGATTATAGGCGTTATTTAGGATTCTCTACCCTCTTTTGTGCATTTATATGTACTGCTAGTGGCACCACTTTATTTACTTATTTCTGTCATTCTCTAGACCATTGTTTGAGGACTTAATAATTTTCAG

mRNA sequence

ATGGTGGAGTTTAGAGTAATTAGAGGGGAAATGGAAGGAGCCAAAATATGTCTCGGTGGTTCTAGTTCGCTTCCAATTCACGAATCCCTAGAAGAATTAATGGAACAGAGGAAGTACAGAGCCGATCTTCTTTCACCTGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCCGCCGTTCACGCCTACAAGAACTACACCGTCGGAGATTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTATAAAAAATGGACGGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAATTTTTAACACTGACAACAATCACTCGGTTGTGCTTACGTACAACTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAAGATGACACGACAGAATGGTCTGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCAACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCATGGACAGGGCCTCCCGAAGAGCATGAGAGACGAAGCTCCGGCTCCTGTAGTTCCCGACACCGGCGACCAAACCGAATCTGCTCCTGACACCATTGTCCCTTCCAACTTCGACAATCCCCAAAACGACGCTGCTGATAGTGACAAGGAGGTTTCGGGCTCAGTTTCGCTATCGCTTCACTTCAAGTTTAATGAGTTTTTCTTCGTGTTAGTTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGATTGTGTTTTCTTACTTTTGTTTATTTCTTAATTTCATTTTTACGGATTTTAATTTTACATTAGTGTGGGTCTTTTTACTGGGCGTTCAAGTATTAATACACACGGTTAGATTATAGGCGTTATTTAGGATTCTCTACCCTCTTTTGTGCATTTATATGTACTGCTAGTGGCACCACTTTATTTACTTATTTCTGTCATTCTCTAGACCATTGTTTGAGGACTTAATAATTTTCAG

Coding sequence (CDS)

ATGGTGGAGTTTAGAGTAATTAGAGGGGAAATGGAAGGAGCCAAAATATGTCTCGGTGGTTCTAGTTCGCTTCCAATTCACGAATCCCTAGAAGAATTAATGGAACAGAGGAAGTACAGAGCCGATCTTCTTTCACCTGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCCGCCGTTCACGCCTACAAGAACTACACCGTCGGAGATTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTATAAAAAATGGACGGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAATTTTTAACACTGACAACAATCACTCGGTTGTGCTTACGTACAACTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAAGATGACACGACAGAATGGTCTGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCAACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCATGGACAGGGCCTCCCGAAGAGCATGAGAGACGAAGCTCCGGCTCCTGTAGTTCCCGACACCGGCGACCAAACCGAATCTGCTCCTGACACCATTGTCCCTTCCAACTTCGACAATCCCCAAAACGACGCTGCTGATAGTGACAAGGAGGTTTCGGGCTCAGTTTCGCTATCGCTTCACTTCAAGTTTAATGAGTTTTTCTTCGTGTTAGTTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGA

Protein sequence

MVEFRVIRGEMEGAKICLGGSSSLPIHESLEELMEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMRDEAPAPVVPDTGDQTESAPDTIVPSNFDNPQNDAADSDKEVSGSVSLSLHFKFNEFFFVLVGIASACIFLCTE

Homology

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BLAST of CmaCh20G001260 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.1e-06
Identity = 39/120 (32.50%), Postives = 54/120 (45.00%), Query Frame = 1


Query: 69  YTVGDSLGWFDKLEKPAVDYKKWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYD 128
           + VGDS GW   +     DY KW     F +GD L+FN +N    VL  +   +K C   
Sbjct: 4   HKVGDSTGWTTLVP---YDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSC--- 63

Query: 129 DASEDDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHG 188
           ++S    +  S AD           ++PL + GT YF  G      CQ GQ+ +I V  G
Sbjct: 64  NSSSPAASYTSGAD-----------SIPLKRPGTFYFLCG--IPGHCQLGQKVEIKVDPG 104

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BLAST of CmaCh20G001260 vs. TrEMBL
Match: A0A0A0KJZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429060 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 2.1e-102
Identity = 197/237 (83.12%), Postives = 209/237 (88.19%), Query Frame = 1


Query: 34  MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWTV 93
           ME RKY+     PAFL LLLFLS+SGRSAVHAYKN+TVGDSLGWFDKLEKPAVDY++WT 
Sbjct: 1   MELRKYK-----PAFL-LLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTA 60

Query: 94  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAVTV 153
           GK F LGDFLIFNTDNNHSVV TYN TTYKLCDYDDAS+ DTTEWSAADPSATTPY VTV
Sbjct: 61  GKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTV 120

Query: 154 AVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMRD---EAPAPVVPDTGDQ 213
           AVPL+KEG NYFFSGNYDGEQCQNGQQF INVTHGQGLPKSMRD   EAPAPVVPDTGDQ
Sbjct: 121 AVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQ 180

Query: 214 TESAPDTIVPSNFDNPQNDAAD--SDKEVSGSVSLSL--HFKFNEFFFVLVGIASAC 264
           TESAPDTI+PS+FDNP+ND AD  +DKE SGS SLSL   FKFNEF F+LVGIASAC
Sbjct: 181 TESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASAC 231

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BLAST of CmaCh20G001260 vs. TrEMBL
Match: A0A061GU10_THECC (Early nodulin-like protein 18 OS=Theobroma cacao GN=TCM_040997 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.1e-71
Identity = 154/239 (64.44%), Postives = 183/239 (76.57%), Query Frame = 1


Query: 33  LMEQRKYRADLLSPAFLV-LLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKW 92
           +++QR Y +  +   F +  LL LS SG  +V AYKNYTVGDSLGW+D LEKPAV+Y+KW
Sbjct: 1   MIKQRGYTSTSVLQFFTISCLLLLSFSG--SVTAYKNYTVGDSLGWYDTLEKPAVNYQKW 60

Query: 93  TVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAV 152
              KNFSLGDFLIFNTDNNHSVV TYNFT YKLCD +DA ++DT EWSAA+PSAT PY V
Sbjct: 61  AAAKNFSLGDFLIFNTDNNHSVVQTYNFTIYKLCDDNDALQNDTIEWSAANPSATVPYPV 120

Query: 153 TVAVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMR--DEAPAPVVPDTGD 212
           +V VPL+KEG NYFFS +YDGEQCQNGQQFKINVTHGQGLPKS+   D+APAP  PD G 
Sbjct: 121 SVPVPLVKEGMNYFFSSDYDGEQCQNGQQFKINVTHGQGLPKSLEEPDDAPAPNSPDFGS 180

Query: 213 QTESAPDTIVPSNFDNPQNDAADSDKEVSGSVSL---SLHFKFNEFFFVLVGIASACIF 266
             +SAPDTIVP+NF++P  + +D D++ SGS SL   SL  K N  F +L+GI   CIF
Sbjct: 181 D-DSAPDTIVPANFNHPIEEESDKDED-SGSFSLLFNSLDRKLNG-FLILLGI--FCIF 232

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BLAST of CmaCh20G001260 vs. TrEMBL
Match: A5ASG1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003566 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.2e-70
Identity = 147/242 (60.74%), Postives = 181/242 (74.79%), Query Frame = 1


Query: 31  EEL-MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYK 90
           EEL MEQR  R+   S   L+LL+F+S SG   V AYKNYTVGDSLGW+D L +P+V+Y+
Sbjct: 36  EELGMEQRMLRSG--SAFLLLLLVFVSFSGY--VEAYKNYTVGDSLGWYDNLHEPSVNYQ 95

Query: 91  KWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPY 150
           KW  GKNFSLGDFLIFNTDNNHSVV TYNFTTYK CDY++A E+DT +WSA DPSAT P 
Sbjct: 96  KWVAGKNFSLGDFLIFNTDNNHSVVQTYNFTTYKHCDYENALENDTYQWSATDPSATNPV 155

Query: 151 AVTVAVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMR---DEAPAPVVPD 210
           AVTV VPL+KEG  YFFS +YDG QC++GQ FK+NV+HGQGLP S++   DEAP PV PD
Sbjct: 156 AVTVPVPLMKEGMTYFFSSDYDGWQCKHGQHFKLNVSHGQGLPPSLKDPADEAPGPVAPD 215

Query: 211 TGDQTESAPDTIVPSNFDNPQNDAADSDKEVSGSVSL---SLHFKFNEFFFVLVGIASAC 266
           +GD+ +SAPDT+VP+NF++P+ +  D+D   SGS  L    LH    +F  +L  +   C
Sbjct: 216 SGDEGDSAPDTVVPANFNDPKQE-NDTD-NTSGSAPLLPSFLHQLDYKFSGILALLGVVC 271

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BLAST of CmaCh20G001260 vs. TrEMBL
Match: A0A0B0N9H2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_13744 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.4e-69
Identity = 143/217 (65.90%), Postives = 169/217 (77.88%), Query Frame = 1


Query: 52  LLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWTVGKNFSLGDFLIFNTDNNH 111
           L+ LS SG  +V AYKNYTVG SLGWFD LEKP V+Y+KW   KNFSLGDFLIFNTDNNH
Sbjct: 22  LVVLSCSG--SVSAYKNYTVGGSLGWFDALEKPDVNYQKWADSKNFSLGDFLIFNTDNNH 81

Query: 112 SVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSGNYD 171
           SV+ TYNFTTYK CDYDDA ++DT EWSAADPS+T P++++VAVPLLKEG NYFFS +YD
Sbjct: 82  SVIQTYNFTTYKFCDYDDALQNDTIEWSAADPSSTAPHSISVAVPLLKEGMNYFFSSDYD 141

Query: 172 GEQCQNGQQFKINVTHGQGLPKSM--RDEAPAPVVPD-TGDQTESAPDTIVPSNFDNPQN 231
           GEQC NGQ FKINVTHGQGLPKS+   D+APAP  PD  GD  +SAP+TIVP+NF++P  
Sbjct: 142 GEQCNNGQHFKINVTHGQGLPKSLDPSDDAPAPNSPDYRGD--DSAPETIVPANFNHPIE 201

Query: 232 DAADSDKEVSGSVSLSLHFKFNEFFFVLVGIASACIF 266
           + +D D E SGS S+  + KF  F   L+ +   CIF
Sbjct: 202 EESDKD-EASGSGSVYFNTKFYGF---LIFLQIVCIF 230

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BLAST of CmaCh20G001260 vs. TrEMBL
Match: A0A067KXH4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08567 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.0e-69
Identity = 140/229 (61.14%), Postives = 169/229 (73.80%), Query Frame = 1


Query: 34  MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWTV 93
           MEQR +     S   L+LLL L      +V AYKNYTVGDS GW+D  EKP +DY+KW  
Sbjct: 1   MEQRSHLLSFPSSCLLLLLLLLPFVSAGSVAAYKNYTVGDSFGWYDNTEKPNLDYQKWAD 60

Query: 94  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAVTV 153
            KNFSLGDFLIFNT+NNHSVV TYNFTTYKLCDYD+A ++DT EWS +DPS T    VTV
Sbjct: 61  SKNFSLGDFLIFNTNNNHSVVQTYNFTTYKLCDYDNALDNDTIEWSVSDPSNTATTGVTV 120

Query: 154 AVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMRD---EAPAPVVPDTGDQ 213
           AVPLLKEGT YFFSG+YDG+QC+ GQ FKINVTHG+GLP+S++D   +APAP  PD   +
Sbjct: 121 AVPLLKEGTTYFFSGDYDGDQCKAGQHFKINVTHGRGLPESLKDPSEQAPAPNSPDVSGE 180

Query: 214 TESAPDTIVPSNFDNPQNDAADSDKEVSGSVSLSLHF---KFNEFFFVL 257
            +  PDTIVP+NFDNP+ D +D D E SGS++L L+F   K N   F++
Sbjct: 181 -DVTPDTIVPANFDNPK-DVSD-DNEDSGSITLYLNFLNVKLNVILFLV 226

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BLAST of CmaCh20G001260 vs. TAIR10
Match: AT1G08500.1 (AT1G08500.1 early nodulin-like protein 18)

HSP 1 Score: 242.3 bits (617), Expect = 3.5e-64
Identity = 126/215 (58.60%), Postives = 157/215 (73.02%), Query Frame = 1


Query: 49  LVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWTVGKNFSLGDFLIFNTD 108
           ++ L+ LSLS      AYKNYTVG+S GWFD  E+P+ +Y+KW   K+FSLGDFLIFNTD
Sbjct: 14  IMCLMLLSLSA----DAYKNYTVGESTGWFDIQERPSANYQKWADSKSFSLGDFLIFNTD 73

Query: 109 NNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSG 168
           +NHSVV TY+F TYK CDYD+   +DTTEWSAA+PSAT+P  V+++VPL+KEG+NYFFSG
Sbjct: 74  SNHSVVQTYDFKTYKDCDYDNNENNDTTEWSAANPSATSPVPVSISVPLVKEGSNYFFSG 133

Query: 169 NYDGEQCQNGQQFKINVTHGQGLPKSMRDE---APAPVVPDTGDQTESAPDTIVPSNFDN 228
           NYDGEQC+ GQ F INVTHGQGLP S   +   AP P         E APDTIVP+NFD+
Sbjct: 134 NYDGEQCKFGQHFMINVTHGQGLPDSSSPDDAAAPGPSESSQSGDDEVAPDTIVPANFDH 193

Query: 229 PQN-DAADSDKEVSGSVSLSLHFKFNEFFFVLVGI 260
           P++ ++AD DKEV    S S   K + F FV +G+
Sbjct: 194 PKDIESADDDKEVHSKKSSSSTTKTSLFCFVFMGL 224

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BLAST of CmaCh20G001260 vs. TAIR10
Match: AT5G15350.1 (AT5G15350.1 early nodulin-like protein 17)

HSP 1 Score: 50.4 bits (119), Expect = 1.9e-06
Identity = 31/79 (39.24%), Postives = 41/79 (51.90%), Query Frame = 1


Query: 50  VLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWTVGKNFSLGDFLIFNTDN 109
           V+L FL  +    V A K YTVG++  W      P ++Y  W  GK+F LGD+L F  D 
Sbjct: 11  VVLAFLMAAPMPGVTA-KKYTVGENKFW-----NPNINYTIWAQGKHFYLGDWLYFVFDR 70

Query: 110 NHSVVLTYNFTTYKLCDYD 129
           N   +L  N T Y+ C  D
Sbjct: 71  NQHNILEVNKTDYEGCIAD 83

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BLAST of CmaCh20G001260 vs. TAIR10
Match: AT3G17675.1 (AT3G17675.1 Cupredoxin superfamily protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 37/117 (31.62%), Postives = 54/117 (46.15%), Query Frame = 1


Query: 69  YTVGDSLGWFDKLEKPAVDYKKWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYD 128
           + VGDS GW     +   +Y  WT G+ F +GD L+FN  ++   V+  N T Y  C  D
Sbjct: 9   HIVGDSNGW-----ELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLD 68

Query: 129 DASEDDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSGNYDGEQCQNGQQFKINV 186
           +     TT ++  + S          + L + G  +F  G  D   C NGQ+  INV
Sbjct: 69  NY----TTLFTKGNDS----------IILSEVGKLWFICGVDD--HCVNGQKLSINV 104

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BLAST of CmaCh20G001260 vs. NCBI nr
Match: gi|659097426|ref|XP_008449619.1| (PREDICTED: cucumber peeling cupredoxin [Cucumis melo])

HSP 1 Score: 396.4 bits (1017), Expect = 4.1e-107
Identity = 200/236 (84.75%), Postives = 214/236 (90.68%), Query Frame = 1


Query: 34  MEQRKYRADLLSPAFL-VLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWT 93
           ME RKY+ D LSPAFL +LLL LS+SGRSAVHAYKN+TVGDSLGWFDKLEKPAVDY+KWT
Sbjct: 1   MELRKYKPDPLSPAFLLLLLLLLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQKWT 60

Query: 94  VGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAVT 153
            GK F LGDFLIFNTDNNHSVV TYNFTTYKLCDYDDASE+DTTEWSAADPSATTPYAV 
Sbjct: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTTEWSAADPSATTPYAVM 120

Query: 154 VAVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSM---RDEAPAPVVPDTGD 213
           VAVPL+KEG NYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSM    DEAPAPVVPDTGD
Sbjct: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMGDPSDEAPAPVVPDTGD 180

Query: 214 QTESAPDTIVPSNFDNPQNDAADSDKEVSGSVSLSL--HFKFNEFFFVLVGIASAC 264
           QTE+APDTIVPS+FDNP+ND AD+DKE S S S+SL   FKFNEFFF+L+GIASAC
Sbjct: 181 QTEAAPDTIVPSSFDNPRNDVADNDKESSSSNSISLVYCFKFNEFFFLLIGIASAC 236

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BLAST of CmaCh20G001260 vs. NCBI nr
Match: gi|449444841|ref|XP_004140182.1| (PREDICTED: cucumber peeling cupredoxin-like [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 3.0e-102
Identity = 197/237 (83.12%), Postives = 209/237 (88.19%), Query Frame = 1


Query: 34  MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWTV 93
           ME RKY+     PAFL LLLFLS+SGRSAVHAYKN+TVGDSLGWFDKLEKPAVDY++WT 
Sbjct: 1   MELRKYK-----PAFL-LLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTA 60

Query: 94  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAVTV 153
           GK F LGDFLIFNTDNNHSVV TYN TTYKLCDYDDAS+ DTTEWSAADPSATTPY VTV
Sbjct: 61  GKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTV 120

Query: 154 AVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMRD---EAPAPVVPDTGDQ 213
           AVPL+KEG NYFFSGNYDGEQCQNGQQF INVTHGQGLPKSMRD   EAPAPVVPDTGDQ
Sbjct: 121 AVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQ 180

Query: 214 TESAPDTIVPSNFDNPQNDAAD--SDKEVSGSVSLSL--HFKFNEFFFVLVGIASAC 264
           TESAPDTI+PS+FDNP+ND AD  +DKE SGS SLSL   FKFNEF F+LVGIASAC
Sbjct: 181 TESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASAC 231

[Close]

BLAST of CmaCh20G001260 vs. NCBI nr
Match: gi|590585146|ref|XP_007015372.1| (Early nodulin-like protein 18 [Theobroma cacao])

HSP 1 Score: 278.1 bits (710), Expect = 1.6e-71
Identity = 154/239 (64.44%), Postives = 183/239 (76.57%), Query Frame = 1


Query: 33  LMEQRKYRADLLSPAFLV-LLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKW 92
           +++QR Y +  +   F +  LL LS SG  +V AYKNYTVGDSLGW+D LEKPAV+Y+KW
Sbjct: 1   MIKQRGYTSTSVLQFFTISCLLLLSFSG--SVTAYKNYTVGDSLGWYDTLEKPAVNYQKW 60

Query: 93  TVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAV 152
              KNFSLGDFLIFNTDNNHSVV TYNFT YKLCD +DA ++DT EWSAA+PSAT PY V
Sbjct: 61  AAAKNFSLGDFLIFNTDNNHSVVQTYNFTIYKLCDDNDALQNDTIEWSAANPSATVPYPV 120

Query: 153 TVAVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMR--DEAPAPVVPDTGD 212
           +V VPL+KEG NYFFS +YDGEQCQNGQQFKINVTHGQGLPKS+   D+APAP  PD G 
Sbjct: 121 SVPVPLVKEGMNYFFSSDYDGEQCQNGQQFKINVTHGQGLPKSLEEPDDAPAPNSPDFGS 180

Query: 213 QTESAPDTIVPSNFDNPQNDAADSDKEVSGSVSL---SLHFKFNEFFFVLVGIASACIF 266
             +SAPDTIVP+NF++P  + +D D++ SGS SL   SL  K N  F +L+GI   CIF
Sbjct: 181 D-DSAPDTIVPANFNHPIEEESDKDED-SGSFSLLFNSLDRKLNG-FLILLGI--FCIF 232

[Close]

BLAST of CmaCh20G001260 vs. NCBI nr
Match: gi|147794520|emb|CAN75991.1| (hypothetical protein VITISV_003566 [Vitis vinifera])

HSP 1 Score: 272.3 bits (695), Expect = 8.9e-70
Identity = 147/242 (60.74%), Postives = 181/242 (74.79%), Query Frame = 1


Query: 31  EEL-MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYK 90
           EEL MEQR  R+   S   L+LL+F+S SG   V AYKNYTVGDSLGW+D L +P+V+Y+
Sbjct: 36  EELGMEQRMLRSG--SAFLLLLLVFVSFSGY--VEAYKNYTVGDSLGWYDNLHEPSVNYQ 95

Query: 91  KWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPY 150
           KW  GKNFSLGDFLIFNTDNNHSVV TYNFTTYK CDY++A E+DT +WSA DPSAT P 
Sbjct: 96  KWVAGKNFSLGDFLIFNTDNNHSVVQTYNFTTYKHCDYENALENDTYQWSATDPSATNPV 155

Query: 151 AVTVAVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMR---DEAPAPVVPD 210
           AVTV VPL+KEG  YFFS +YDG QC++GQ FK+NV+HGQGLP S++   DEAP PV PD
Sbjct: 156 AVTVPVPLMKEGMTYFFSSDYDGWQCKHGQHFKLNVSHGQGLPPSLKDPADEAPGPVAPD 215

Query: 211 TGDQTESAPDTIVPSNFDNPQNDAADSDKEVSGSVSL---SLHFKFNEFFFVLVGIASAC 266
           +GD+ +SAPDT+VP+NF++P+ +  D+D   SGS  L    LH    +F  +L  +   C
Sbjct: 216 SGDEGDSAPDTVVPANFNDPKQE-NDTD-NTSGSAPLLPSFLHQLDYKFSGILALLGVVC 271

[Close]

BLAST of CmaCh20G001260 vs. NCBI nr
Match: gi|225435888|ref|XP_002265702.1| (PREDICTED: blue copper protein [Vitis vinifera])

HSP 1 Score: 271.9 bits (694), Expect = 1.2e-69
Identity = 144/238 (60.50%), Postives = 178/238 (74.79%), Query Frame = 1


Query: 34  MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWTV 93
           MEQR  R+   S   L+LL+F+S SG   V AYKNYTVGDSLGW+D L +P+V+Y+KW  
Sbjct: 1   MEQRMLRSG--SAFLLLLLVFVSFSGY--VEAYKNYTVGDSLGWYDNLHEPSVNYQKWVA 60

Query: 94  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAVTV 153
           GKNFSLGDFLIFNTDNNHSVV TYNFTTYK CDY++A E+DT +WSA DPSAT P AVTV
Sbjct: 61  GKNFSLGDFLIFNTDNNHSVVQTYNFTTYKHCDYENALENDTYQWSATDPSATNPVAVTV 120

Query: 154 AVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMR---DEAPAPVVPDTGDQ 213
            VPL+KEG  YFFS +YDG QC++GQ FK+NV+HGQGLP S++   DEAP PV PD+GD+
Sbjct: 121 PVPLMKEGMTYFFSSDYDGWQCKHGQHFKLNVSHGQGLPPSLKDPADEAPGPVAPDSGDE 180

Query: 214 TESAPDTIVPSNFDNPQNDAADSDKEVSGSVSL---SLHFKFNEFFFVLVGIASACIF 266
            +SAPDT+VP+NF++P+ +  D+D   SGS  L    LH    +F  +L  +   CIF
Sbjct: 181 GDSAPDTVVPANFNDPKQE-NDTD-NTSGSAPLLPSFLHQLDYKFSGILALLGVVCIF 232

The following BLAST results are available for this feature:

BLAST of CmaCh20G001260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MAVI_CUCPE	9.1e-06	32.50	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]

BLAST of CmaCh20G001260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJZ8_CUCSA	2.1e-102	83.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429060 PE=4 SV=1	[more]
A0A061GU10_THECC	1.1e-71	64.44	Early nodulin-like protein 18 OS=Theobroma cacao GN=TCM_040997 PE=4 SV=1	[more]
A5ASG1_VITVI	6.2e-70	60.74	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003566 PE=4 SV=1	[more]
A0A0B0N9H2_GOSAR	2.4e-69	65.90	Uncharacterized protein OS=Gossypium arboreum GN=F383_13744 PE=4 SV=1	[more]
A0A067KXH4_JATCU	9.0e-69	61.14	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08567 PE=4 SV=1	[more]

BLAST of CmaCh20G001260 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08500.1	3.5e-64	58.60	early nodulin-like protein 18	[more]
AT5G15350.1	1.9e-06	39.24	early nodulin-like protein 17	[more]
AT3G17675.1	2.5e-06	31.62	Cupredoxin superfamily protein	[more]

BLAST of CmaCh20G001260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097426\|ref\|XP_008449619.1\|	4.1e-107	84.75	PREDICTED: cucumber peeling cupredoxin [Cucumis melo]	[more]
gi\|449444841\|ref\|XP_004140182.1\|	3.0e-102	83.12	PREDICTED: cucumber peeling cupredoxin-like [Cucumis sativus]	[more]
gi\|590585146\|ref\|XP_007015372.1\|	1.6e-71	64.44	Early nodulin-like protein 18 [Theobroma cacao]	[more]
gi\|147794520\|emb\|CAN75991.1\|	8.9e-70	60.74	hypothetical protein VITISV_003566 [Vitis vinifera]	[more]
gi\|225435888\|ref\|XP_002265702.1\|	1.2e-69	60.50	PREDICTED: blue copper protein [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G001260.1	CmaCh20G001260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 77..179 score: 9.5
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 67..187 score: 2
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 65..187 score: 1.2
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 67..185 score: 1.35
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 32..238 score: 1.9
None	No IPR available	PANTHER	PTHR33021:SF41	EARLY NODULIN-LIKE PROTEIN 18	coord: 32..238 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G001260	Cucsa.086810	Cucumber (Gy14) v1	cgycmaB0166
CmaCh20G001260	Cla008595	Watermelon (97103) v1	cmawmB531
CmaCh20G001260	Csa6G429060	Cucumber (Chinese Long) v2	cmacuB562
CmaCh20G001260	MELO3C014540	Melon (DHL92) v3.5.1	cmameB521
CmaCh20G001260	ClCG02G022660	Watermelon (Charleston Gray)	cmawcgB489
CmaCh20G001260	CSPI06G23650	Wild cucumber (PI 183967)	cmacpiB569
CmaCh20G001260	CmoCh20G001350	Cucurbita moschata (Rifu)	cmacmoB550
CmaCh20G001260	Lsi10G011120	Bottle gourd (USVL1VR-Ls)	cmalsiB500
CmaCh20G001260	Cp4.1LG16g08350	Cucurbita pepo (Zucchini)	cmacpeB564
CmaCh20G001260	Cp4.1LG05g04540	Cucurbita pepo (Zucchini)	cmacpeB586
CmaCh20G001260	MELO3C014540.2	Melon (DHL92) v3.6.1	cmamedB598
CmaCh20G001260	CsaV3_6G038780	Cucumber (Chinese Long) v3	cmacucB0676
CmaCh20G001260	Cla97C02G048750	Watermelon (97103) v2	cmawmbB577
CmaCh20G001260	Bhi10G000176	Wax gourd	cmawgoB0693
CmaCh20G001260	CsGy6G022990	Cucumber (Gy14) v2	cgybcmaB799
CmaCh20G001260	Carg06862	Silver-seed gourd	carcmaB0732

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G001260	Cucurbita maxima (Rimu)	cmacmaB470
CmaCh20G001260	Cucurbita moschata (Rifu)	cmacmoB555
CmaCh20G001260	Melon (DHL92) v3.6.1	cmamedB595
CmaCh20G001260	Silver-seed gourd	carcmaB1267